TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950080.2.1
(687 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG558624.1|BG558624 RHIZ2_58_C07.g1_A003 Rhizome2 (RHIZ2... 305 5e-082
gb|BG560669.1|BG560669 RHIZ2_58_C07.b1_A003 Rhizome2 (RHIZ2... 294 8e-079
gb|CW404143.1|CW404143 fsbb001f096c18f0 Sorghum methylation... 132 2e-061
gb|CL187165.1|CL187165 104_402_10900697_116_32436_071 Sorgh... 137 2e-031
gb|CW492052.1|CW492052 fsbb001f282c21f0 Sorghum methylation... 118 8e-026
>gb|BG558624.1|BG558624 RHIZ2_58_C07.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 516
Score = 305 bits (660), Expect = 5e-082
Identities = 121/126 (96%), Positives = 123/126 (97%)
Frame = +2 / +1
Query: 167 DGWDADLECHVINEDLVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHD 346
DGWD DLECHVINEDLVCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHD
Sbjct: 1 DGWDDDLECHVINEDLVCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHD 180
Query: 347 RLTGRGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVN 526
RLTGRGY GSKL NNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDW+N
Sbjct: 181 RLTGRGYTGSKLTNNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWIN 360
Query: 527 NWRPS* 544
NWRPS*
Sbjct: 361 NWRPS* 378
Score = 249 bits (539), Expect = 2e-065
Identities = 108/120 (90%), Positives = 112/120 (93%)
Frame = -3 / -1
Query: 541 TRSPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVT 362
TRSPIVYPVCQCT+VPTNILHVVTSQ HHDVLSVALPRLLE+HLEDFAL VV ELGT +T
Sbjct: 375 TRSPIVYPVCQCTHVPTNILHVVTSQRHHDVLSVALPRLLEKHLEDFALDVVRELGTRIT 196
Query: 361 SARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVAHQVLVDDMALEV 182
SA Q IMQN*VVSLEHNYEVKPTF KEITSVVIY*YTTFFHHVLKL+A QVLVDDMALEV
Sbjct: 195 SAGQTIMQN*VVSLEHNYEVKPTFRKEITSVVIY*YTTFFHHVLKLIADQVLVDDMALEV 16
Score = 234 bits (506), Expect = 9e-061
Identities = 104/119 (87%), Positives = 107/119 (89%)
Frame = +1 / +3
Query: 196 CHQRGPGVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGF 375
CHQRGPG+R A*G DGRRWYTSRLPRM*FLS TLV*PRSCAPD*QLNSA*S D QRL+GF
Sbjct: 30 CHQRGPGLR*A*GRDGRRWYTSRLPRM*FLS*TLV*PRSCAPD*QLNSA*SSDRQRLYGF 209
Query: 376 QARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET*LDLS 552
QA +QHRVRNLPSA RGGEGELQRGHRDA AK*QRGGY**ER CIDRL KQLET*L S
Sbjct: 210 QAHEQHRVRNLPSASRGGEGELQRGHRDAFAK*QRGGY**ERGCIDRLDKQLET*LTCS 386
Score = 185 bits (398), Expect = 7e-046
Identities = 89/120 (74%), Positives = 89/120 (74%)
Frame = +3 / +2
Query: 183 TSSAMSSTRTWCATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RAE 362
TSSAMSSTRTW A SLRT*WKKVVY**ITTDVISF NVGLTS*LCSRLTTQFCMI * AE
Sbjct: 17 TSSAMSSTRTWSAMSLRT*WKKVVY**ITTDVISFLNVGLTS*LCSRLTTQFCMIV*PAE 196
Query: 363 VTWVXXXXXXXXXXXXXXXXXXXXXXTERTS*CHCEVTTWRILVGT*VH*QTG*TIGDLV 542
V V TERTS*C CEVTTWRILVGT VH*QTG*TIGDLV
Sbjct: 197 VIRVPSSRTTSSAKSSKCFSRRRGRATERTS*CLCEVTTWRILVGTWVH*QTG*TIGDLV 376
Score = 146 bits (313), Expect(2) = 3e-034
Identities = 65/80 (81%), Positives = 66/80 (82%)
Frame = -1 / -2
Query: 519 QSVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PLPVRRSC 340
QSVNAPTFLLISSTLSLR GITM STWKISHSML SLEP+*PLPVRRSC
Sbjct: 353 QSVNAPTFLLISSTLSLRKGITMSSL*LSLASSRSTWKISHSMLFVSLEPV*PLPVRRSC 174
Query: 339 RIELSVWSTTTRSNQRSGKK 280
RIELSVWSTTTRSNQRSGKK
Sbjct: 173 RIELSVWSTTTRSNQRSGKK 114
Score = 136 bits (291), Expect(3) = 1e-047
Identities = 56/64 (87%), Positives = 56/64 (87%)
Frame = -2 / -3
Query: 416 ALGRFRTLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPS 237
ALGRFRT CC AWNP NLC S DHAELSCQSGAQLRGQTNV ERNHIRGNLLVYHLLPS
Sbjct: 250 ALGRFRTRCCS*AWNPYNLCRSDDHAELSCQSGAQLRGQTNVQERNHIRGNLLVYHLLPS 71
Query: 236 CPQA 225
PQA
Sbjct: 70 RPQA 59
Score = 62.0 bits (129), Expect(3) = 1e-047
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = -2 / -3
Query: 551 DRSN*VSNCLPSLSMHLRSY*YPPRCHFAMA 459
++ N*VSNCL SLSMH RSY*YPPRCHFA A
Sbjct: 385 EQVN*VSNCLSSLSMHPRSY*YPPRCHFAKA 293
Score = 31.8 bits (63), Expect(3) = 1e-047
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / -2
Query: 204 LMTWHSRSASQP 169
LMTWHSRS+SQP
Sbjct: 38 LMTWHSRSSSQP 3
Score = 21.7 bits (41), Expect(2) = 3e-034
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -1 / -2
Query: 153 SRTRSPMLTWRRPAAS 106
S+TRS ++TW ++S
Sbjct: 56 SQTRSSLMTWHSRSSS 9
>gb|BG560669.1|BG560669 RHIZ2_58_C07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 459
Score = 294 bits (637), Expect = 8e-079
Identities = 120/137 (87%), Positives = 121/137 (88%)
Frame = +2 / +2
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R A PNVLV CSLLADAAGLRHVNIGDLVREKSLHDGWD DLECHVINED
Sbjct: 47 RRAHPNVLVTGTPGTGKTTTCSLLADAAGLRHVNIGDLVREKSLHDGWDDDLECHVINED 226
Query: 212 LVCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYMGSKLANN 391
LVCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGY GSKL NN
Sbjct: 227 LVCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGRGYTGSKLTNN 406
Query: 392 IECEIFQVLLEEARESY 442
IECEIFQVLLEEARESY
Sbjct: 407 IECEIFQVLLEEARESY 457
Score = 172 bits (371), Expect(2) = 3e-068
Identities = 77/87 (88%), Positives = 80/87 (91%)
Frame = -3 / -3
Query: 442 VALPRLLEEHLEDFALYVVGELGTHVTSARQAIMQN*VVSLEHNYEVKPTFWKEITSVVI 263
VALPRLLE+HLEDFAL VV ELGT +TSA Q IMQN*VVSLEHNYEVKPTF KEITSVVI
Sbjct: 457 VALPRLLEKHLEDFALDVVRELGTRITSAGQTIMQN*VVSLEHNYEVKPTFRKEITSVVI 278
Query: 262 Y*YTTFFHHVLKLVAHQVLVDDMALEV 182
Y*YTTFFHHVLKL+A QVLVDDMALEV
Sbjct: 277 Y*YTTFFHHVLKLIADQVLVDDMALEV 197
Score = 167 bits (360), Expect = 1e-040
Identities = 72/82 (87%), Positives = 75/82 (91%)
Frame = +1 / +1
Query: 196 CHQRGPGVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQRLHGF 375
CHQRGPG+R A*G DGRRWYTSRLPRM*FLS TLV*PRSCAPD*QLNSA*S D QRL+GF
Sbjct: 211 CHQRGPGLR*A*GRDGRRWYTSRLPRM*FLS*TLV*PRSCAPD*QLNSA*SSDRQRLYGF 390
Query: 376 QARQQHRVRNLPSAPRGGEGEL 441
QA +QHRVRNLPSA RGGEGEL
Sbjct: 391 QAHEQHRVRNLPSASRGGEGEL 456
Score = 136 bits (291), Expect(2) = 8e-032
Identities = 56/64 (87%), Positives = 56/64 (87%)
Frame = -2 / -2
Query: 416 ALGRFRTLCCWRAWNPCNLCPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPS 237
ALGRFRT CC AWNP NLC S DHAELSCQSGAQLRGQTNV ERNHIRGNLLVYHLLPS
Sbjct: 431 ALGRFRTRCCS*AWNPYNLCRSDDHAELSCQSGAQLRGQTNVQERNHIRGNLLVYHLLPS 252
Query: 236 CPQA 225
PQA
Sbjct: 251 RPQA 240
Score = 133 bits (285), Expect = 3e-030
Identities = 62/89 (69%), Positives = 62/89 (69%)
Frame = +3 / +3
Query: 99 SLPTPQXXXXXXXXXXXXXXXXXXXXXPTSSAMSSTRTWCATSLRT*WKKVVY**ITTDV 278
SLPTPQ TSSAMSSTRTW A SLRT*WKKVVY**ITTDV
Sbjct: 114 SLPTPQASVTSTSATSSARRASTTAGTTTSSAMSSTRTWSAMSLRT*WKKVVY**ITTDV 293
Query: 279 ISFQNVGLTS*LCSRLTTQFCMIA*RAEV 365
ISF NVGLTS*LCSRLTTQFCMI * AEV
Sbjct: 294 ISFLNVGLTS*LCSRLTTQFCMIV*PAEV 380
Score = 107 bits (228), Expect(2) = 3e-068
Identities = 50/66 (75%), Positives = 51/66 (77%)
Frame = -1 / -1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LMTWHSRS+SQPS RLFSRTRSPMLT RRPAASAR EH VTSTFG A REP
Sbjct: 219 LMTWHSRSSSQPSWRLFSRTRSPMLT*RRPAASARREHVVVFPVPGVPVTSTFGCARREP 40
Query: 24 PPLPAA 7
PPLPAA
Sbjct: 39 PPLPAA 22
Score = 102 bits (218), Expect = 5e-021
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = -1 / -1
Query: 414 TWKISHSMLLASLEPM*PLPVRRSCRIELSVWSTTTRSNQRSGKK 280
TWKISHSML SLEP+*PLPVRRSCRIELSVWSTTTRSNQRSGKK
Sbjct: 429 TWKISHSMLFVSLEPV*PLPVRRSCRIELSVWSTTTRSNQRSGKK 295
Score = 22.1 bits (42), Expect(2) = 8e-032
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -1 / -1
Query: 153 SRTRSPMLTWRRPAASARS 97
S+TRS ++TW ++S S
Sbjct: 237 SQTRSSLMTWHSRSSSQPS 181
>gb|CW404143.1|CW404143 fsbb001f096c18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f096c18, DNA
sequence
Length = 754
Score = 132 bits (283), Expect(2) = 2e-061
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = +2 / +2
Query: 359 RGYMGSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNN 529
RGY GSKL NNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDW+NN
Sbjct: 584 RGYTGSKLTNNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWINN 754
Score = 127 bits (271), Expect(2) = 3e-052
Identities = 51/57 (89%), Positives = 54/57 (94%)
Frame = -3 / -1
Query: 529 IVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGTHVTS 359
IVYPVCQCT+VPTNILHVVTSQWHHDVLSVALPRLLE+HLEDFAL VV ELGT +TS
Sbjct: 754 IVYPVCQCTHVPTNILHVVTSQWHHDVLSVALPRLLEKHLEDFALDVVRELGTRITS 584
Score = 124 bits (266), Expect(2) = 2e-061
Identities = 48/49 (97%), Positives = 49/49 (100%)
Frame = +2 / +3
Query: 215 VCDELEDMMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGR 361
VCDELED+MEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGR
Sbjct: 360 VCDELEDVMEEGGILVDYHGCDFFPERWFDLVVVLQTDNSILHDRLTGR 506
Score = 120 bits (256), Expect(2) = 2e-048
Identities = 51/57 (89%), Positives = 53/57 (92%)
Frame = +1 / +1
Query: 358 QRLHGFQARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQ 528
QRL+GFQA +QHRVRNLPSA RGGEGELQRGHRDAIAK*QRGGY**ER CIDRL KQ
Sbjct: 583 QRLYGFQAHEQHRVRNLPSASRGGEGELQRGHRDAIAK*QRGGY**ERGCIDRLDKQ 753
Score = 99.6 bits (211), Expect(2) = 3e-040
Identities = 43/47 (91%), Positives = 44/47 (93%)
Frame = -3 / -3
Query: 358 ARQAIMQN*VVSLEHNYEVKPTFWKEITSVVIY*YTTFFHHVLKLVA 218
A Q IMQN*VVSLEHNYEVKPTF KEITSVVIY*YTTFFHHVLKL+A
Sbjct: 503 AGQTIMQN*VVSLEHNYEVKPTFRKEITSVVIY*YTTFFHHVLKLIA 363
Score = 99.6 bits (211), Expect(2) = 3e-052
Identities = 41/45 (91%), Positives = 41/45 (91%)
Frame = -2 / -2
Query: 359 CPSGDHAELSCQSGAQLRGQTNVLERNHIRGNLLVYHLLPSCPQA 225
C S DHAELSCQSGAQLRGQTNV ERNHIRGNLLVYHLLPS PQA
Sbjct: 504 CRSDDHAELSCQSGAQLRGQTNVQERNHIRGNLLVYHLLPSRPQA 370
Score = 93.6 bits (198), Expect(2) = 2e-048
Identities = 43/49 (87%), Positives = 44/49 (89%)
Frame = +1 / +2
Query: 214 GVRRA*GHDGRRWYTSRLPRM*FLSRTLV*PRSCAPD*QLNSA*SPDGQ 360
G+R A*G DGRRWYTSRLPRM*FLS TLV*PRSCAPD*QLNSA*S D Q
Sbjct: 359 GLR*A*GRDGRRWYTSRLPRM*FLS*TLV*PRSCAPD*QLNSA*SSDRQ 505
Score = 91.8 bits (194), Expect(2) = 2e-031
Identities = 43/47 (91%), Positives = 43/47 (91%)
Frame = +3 / +1
Query: 219 ATSLRT*WKKVVY**ITTDVISFQNVGLTS*LCSRLTTQFCMIA*RA 359
A SLRT*WKKVVY**ITTDVISF NVGLTS*LCSRLTTQFCMI * A
Sbjct: 364 AMSLRT*WKKVVY**ITTDVISFLNVGLTS*LCSRLTTQFCMIV*PA 504
Score = 87.2 bits (184), Expect(2) = 3e-040
Identities = 40/54 (74%), Positives = 41/54 (75%)
Frame = -1 / -2
Query: 519 QSVNAPTFLLISSTLSLRNGITMXXXXXXXXXXXSTWKISHSMLLASLEPM*PL 358
QSVNAPTFLLISSTLSLRNGITM STWKISHSML SLEP+*PL
Sbjct: 744 QSVNAPTFLLISSTLSLRNGITMSSL*LSLASSRSTWKISHSMLFVSLEPV*PL 583
Score = 67.0 bits (140), Expect(2) = 2e-031
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +3 / +3
Query: 441 TERTS*CHCEVTTWRILVGT*VH*QTG*T 527
TERTS*CHCEVTTWRILVGT VH*QTG*T
Sbjct: 666 TERTS*CHCEVTTWRILVGTWVH*QTG*T 752
Score = 66.6 bits (139), Expect(3) = 3e-027
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -1 / -1
Query: 360 LPVRRSCRIELSVWSTTTRSNQRSGKK 280
LPVRRSCRIELSVWSTTTRSNQRSGKK
Sbjct: 505 LPVRRSCRIELSVWSTTTRSNQRSGKK 425
Score = 54.7 bits (113), Expect(3) = 3e-027
Identities = 21/23 (91%), Positives = 21/23 (91%)
Frame = -2 / -3
Query: 527 CLPSLSMHLRSY*YPPRCHFAMA 459
CL SLSMH RSY*YPPRCHFAMA
Sbjct: 752 CLSSLSMHPRSY*YPPRCHFAMA 684
Score = 39.6 bits (80), Expect(3) = 3e-027
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -2 / -3
Query: 416 ALGRFRTLCCWRAWNPCNL 360
ALGRFRT CC AWNP NL
Sbjct: 641 ALGRFRTRCCS*AWNPYNL 585
>gb|CL187165.1|CL187165 104_402_10900697_116_32436_071 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900697, DNA
sequence
Length = 670
Score = 137 bits (294), Expect = 2e-031
Identities = 56/58 (96%), Positives = 57/58 (98%)
Frame = +2 / -1
Query: 371 GSKLANNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWVNNWRPS* 544
GSKL NNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDW+NNWRPS*
Sbjct: 667 GSKLTNNIECEIFQVLLEEARESYREDIVMPLRSDNVEDISRNVGALTDWINNWRPS* 494
Score = 131 bits (280), Expect = 1e-029
Identities = 53/57 (92%), Positives = 55/57 (96%)
Frame = -3 / +2
Query: 541 TRSPIVYPVCQCTYVPTNILHVVTSQWHHDVLSVALPRLLEEHLEDFALYVVGELGT 371
TRSPIVYPVCQCT+VPTNILHVVTSQWHHDVLSVALPRLLE+HLEDFAL VV ELGT
Sbjct: 497 TRSPIVYPVCQCTHVPTNILHVVTSQWHHDVLSVALPRLLEKHLEDFALDVVRELGT 667
Score = 123 bits (264), Expect = 2e-027
Identities = 55/64 (85%), Positives = 56/64 (87%)
Frame = +1 / -3
Query: 370 GFQARQQHRVRNLPSAPRGGEGELQRGHRDAIAK*QRGGY**ERRCIDRLGKQLET*LDL 549
GFQA +QHRVRNLPSA RGGEGELQRGHRDAIAK*QRGGY**ER CIDRL KQLET*L L
Sbjct: 668 GFQAHEQHRVRNLPSASRGGEGELQRGHRDAIAK*QRGGY**ERGCIDRLDKQLET*LTL 489
Query: 550 SKEM 561
M
Sbjct: 488 HYRM 477
>gb|CW492052.1|CW492052 fsbb001f282c21f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f282c21, DNA
sequence
Length = 670
Score = 118 bits (252), Expect = 1e-025
Identities = 49/62 (79%), Positives = 49/62 (79%)
Frame = +2 / -3
Query: 32 RHARPNVLVXXXXXXXXXXXCSLLADAAGLRHVNIGDLVREKSLHDGWDADLECHVINED 211
R ARPNVLV CSLLADAAGLRHVNIGDLVREKSLHDGWD DLECHVINED
Sbjct: 290 RRARPNVLVTGTPGTGKTTTCSLLADAAGLRHVNIGDLVREKSLHDGWDDDLECHVINED 111
Query: 212 LV 217
LV
Sbjct: 110 LV 105
Score = 111 bits (236), Expect(2) = 8e-026
Identities = 51/66 (77%), Positives = 52/66 (78%)
Frame = -1 / +1
Query: 204 LMTWHSRSASQPS*RLFSRTRSPMLTWRRPAASARSEHXXXXXXXXXXVTSTFGRACREP 25
LMTWHSRS+SQPS RLFSRTRSPMLT RRPAASAR EH VTSTFGRA REP
Sbjct: 118 LMTWHSRSSSQPSWRLFSRTRSPMLT*RRPAASARREHVVVFPVPGVPVTSTFGRARREP 297
Query: 24 PPLPAA 7
PPLPAA
Sbjct: 298 PPLPAA 315
Score = 27.2 bits (53), Expect(2) = 8e-026
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -3 / +3
Query: 217 HQVLVDDMALEV 182
+QVLVDDMALEV
Sbjct: 105 YQVLVDDMALEV 140
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 691,743,789
Number of Sequences: 832831
Number of extensions: 9129663
Number of successful extensions: 86570
Number of sequences better than 1.0e-020: 6
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20673580668
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)