TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2649891.2.1
(621 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sor... 122 2e-061
gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sor... 133 3e-049
gb|BG049047.1|BG049047 OV1_22_E11.g1_A002 Ovary 1 (OV1) Sor... 128 7e-048
gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorgh... 91 9e-046
gb|CN136626.1|CN136626 OX1_44_G12.b1_A002 Oxidatively-stres... 112 1e-044
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 109 2e-043
gb|CW233768.1|CW233768 104_687_11213622_116_37380_027 Sorgh... 90 3e-043
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 107 4e-043
gb|BG049025.1|BG049025 OV1_22_C07.g1_A002 Ovary 1 (OV1) Sor... 109 2e-041
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 80 2e-040
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 80 2e-040
gb|CW155769.1|CW155769 104_558_11146316_116_36370_074 Sorgh... 89 3e-040
gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1... 99 3e-039
gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-defici... 99 3e-039
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 97 1e-038
gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation... 95 9e-038
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 95 1e-037
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 95 1e-037
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 95 1e-037
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 95 1e-037
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 95 1e-037
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 95 2e-037
gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation... 155 6e-037
gb|CW253166.1|CW253166 104_716_11224935_116_35104_054 Sorgh... 90 6e-037
gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation... 90 6e-037
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 95 1e-036
gb|BZ339450.1|BZ339450 ic32c10.b1 WGS-SbicolorF (JM107 adap... 91 1e-036
gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorgh... 91 4e-036
gb|CW268308.1|CW268308 104_739_11401215_116_35306_064 Sorgh... 116 6e-036
gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorgh... 151 7e-036
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 88 1e-035
gb|CW241491.1|CW241491 104_700_11218800_116_37544_086 Sorgh... 91 4e-035
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 90 4e-035
gb|CW396909.1|CW396909 fsbb001f085j02k0 Sorghum methylation... 122 9e-035
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 80 9e-035
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 90 9e-035
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 90 9e-035
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 90 1e-034
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 90 1e-034
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 90 1e-034
gb|BE361244.1|BE361244 DG1_70_C10.g1_A002 Dark Grown 1 (DG1... 84 1e-034
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 95 2e-034
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 88 3e-034
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 88 3e-034
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 88 3e-034
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 88 3e-034
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 80 4e-034
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 80 8e-034
gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adap... 83 1e-033
gb|CD210102.1|CD210102 HS1_57_F11.b1_A012 Heat-shocked seed... 90 1e-033
gb|CW335483.1|CW335483 104_834_11483062_148_36104_089 Sorgh... 85 2e-033
gb|CX610193.1|CX610193 ANR1_17_E04.b1_A002 Anaerobic roots ... 85 2e-033
gb|CW359786.1|CW359786 fsbb001f027j03k0 Sorghum methylation... 85 2e-033
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 80 1e-032
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 80 1e-032
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 83 1e-032
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 83 1e-032
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 95 4e-032
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 90 5e-032
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 80 6e-032
gb|CN123868.1|CN123868 RHOH1_1_F04.b1_A002 Acid- and alkali... 83 2e-031
gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorgh... 79 2e-031
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 83 3e-031
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 90 6e-031
gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation... 80 2e-030
gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorgh... 80 2e-030
gb|CD223142.1|CD223142 CCC1_26_C06.b1_A007 Callus culture/c... 80 2e-030
gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation... 80 2e-030
gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stres... 79 2e-030
gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stres... 79 2e-030
gb|BG048752.1|BG048752 OV1_22_E11.b1_A002 Ovary 1 (OV1) Sor... 133 2e-030
gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stres... 79 3e-030
gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkal... 84 6e-030
gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stres... 80 6e-030
gb|CX607383.1|CX607383 ANR1_8_G05.b1_A002 Anaerobic roots S... 80 6e-030
gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkal... 80 8e-030
gb|CX616323.1|CX616323 GABR1_27_F04.b1_A002 GA- or brassino... 80 8e-030
gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sor... 80 8e-030
gb|CD223154.1|CD223154 CCC1_26_F12.b1_A007 Callus culture/c... 80 8e-030
gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorgh... 80 8e-030
gb|CN149473.1|CN149473 WOUND1_63_A11.b1_A002 Wounded leaves... 78 1e-029
gb|CD430458.1|CD430458 ETH1_19_F11.b1_A002 Ethylene-treated... 85 2e-029
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 83 4e-029
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 83 4e-029
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 83 4e-029
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 78 7e-029
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 83 1e-028
gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/c... 80 1e-028
gb|CW300425.1|CW300425 104_783_11463650_148_36247_001 Sorgh... 73 2e-028
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 78 2e-028
gb|CW417495.1|CW417495 fsbb001f120i17f0 Sorghum methylation... 65 8e-028
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 83 1e-027
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 83 1e-027
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 83 1e-027
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 83 1e-027
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 83 1e-027
gb|CD463889.1|CD463889 ETH1_47_B11.b1_A002 Ethylene-treated... 73 1e-027
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 78 1e-027
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 77 2e-027
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 108 2e-027
gb|CD226829.1|CD226829 CCC1_48_E12.b1_A007 Callus culture/c... 100 2e-027
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 78 2e-027
gb|CW038650.1|CW038650 104_271_10505052_114_30387 Sorghum m... 72 3e-027
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 62 7e-027
gb|BG048321.1|BG048321 OV1_16_G02.g1_A002 Ovary 1 (OV1) Sor... 71 1e-026
gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkal... 90 4e-026
gb|CD227127.1|CD227127 CCC1_4_A10.b1_A007 Callus culture/ce... 71 5e-026
gb|CD227727.1|CD227727 CCC1_53_C01.b1_A007 Callus culture/c... 73 5e-026
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 78 7e-026
gb|CD223263.1|CD223263 CCC1_27_E07.b1_A007 Callus culture/c... 73 1e-025
gb|CW333675.1|CW333675 104_831_11482081_148_36044_001 Sorgh... 69 1e-025
gb|CW280308.1|CW280308 104_755_11407550_148_35446_055 Sorgh... 69 1e-025
gb|CW233769.1|CW233769 104_687_11213622_148_37379_027 Sorgh... 88 2e-025
gb|CD223643.1|CD223643 CCC1_29_B07.b1_A007 Callus culture/c... 71 2e-025
gb|BG159424.1|BG159424 OV2_7_F12.g1_A002 Ovary 2 (OV2) Sorg... 71 2e-025
gb|CW428522.1|CW428522 fsbb001f141e10k0 Sorghum methylation... 65 3e-025
gb|CD225932.1|CD225932 CCC1_42_G10.b1_A007 Callus culture/c... 73 3e-025
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 108 6e-025
gb|CF489807.1|CF489807 POL1_59_F02.g1_A002 Pollen Sorghum b... 92 6e-025
gb|BF657412.1|BF657412 OV2_24_G10.g1_A002 Ovary 2 (OV2) Sor... 71 6e-025
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 80 7e-025
gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation... 75 9e-025
gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorgh... 75 9e-025
gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorgh... 75 9e-025
gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorgh... 75 9e-025
gb|CW089886.1|CW089886 104_435_10948967_116_32598_088 Sorgh... 79 1e-024
gb|CN133273.1|CN133273 OX1_11_E08.b1_A002 Oxidatively-stres... 79 2e-024
gb|CD227112.1|CD227112 CCC1_4_D07.b1_A007 Callus culture/ce... 71 2e-024
gb|CD221690.1|CD221690 CCC1_70_E10.b1_A007 Callus culture/c... 71 2e-024
gb|CD222137.1|CD222137 CCC1_2_B01.b1_A007 Callus culture/ce... 71 2e-024
gb|CW269038.1|CW269038 104_740_11401653_116_35318_093 Sorgh... 80 2e-024
gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum m... 74 2e-024
gb|CW480555.1|CW480555 fsbb001f239k22f0 Sorghum methylation... 90 2e-024
gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorgh... 91 3e-024
gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorgh... 91 4e-024
gb|CD228001.1|CD228001 CCC1_5_B06.b1_A007 Callus culture/ce... 70 4e-024
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 83 4e-024
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 83 4e-024
gb|CD225094.1|CD225094 CCC1_38_F05.b1_A007 Callus culture/c... 69 6e-024
gb|CW140343.1|CW140343 104_530_11135731_148_34916_066 Sorgh... 65 8e-024
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 108 1e-023
gb|CX607987.1|CX607987 ANR1_32_A06.b1_A002 Anaerobic roots ... 65 4e-023
gb|CF483096.1|CF483096 POL1_11_F05.b1_A002 Pollen Sorghum b... 79 7e-023
gb|CN128214.1|CN128214 RHOH1_27_G06.g1_A002 Acid- and alkal... 108 9e-023
gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stres... 80 1e-022
gb|CF487513.1|CF487513 POL1_44_F08.b1_A002 Pollen Sorghum b... 76 3e-022
gb|CF487790.1|CF487790 POL1_46_A03.b1_A002 Pollen Sorghum b... 74 1e-021
gb|CF483683.1|CF483683 POL1_24_B02.b1_A002 Pollen Sorghum b... 74 1e-021
gb|CF480166.1|CF480166 POL1_64_D03.b1_A002 Pollen Sorghum b... 74 1e-021
gb|CF487484.1|CF487484 POL1_44_C08.b1_A002 Pollen Sorghum b... 74 1e-021
gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Mer... 75 2e-021
gb|CD227862.1|CD227862 CCC1_56_H03.b1_A007 Callus culture/c... 77 2e-021
gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves... 92 4e-021
gb|CF485229.1|CF485229 POL1_30_E09.b1_A002 Pollen Sorghum b... 72 5e-021
gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum m... 83 7e-021
gb|CW062333.1|CW062333 104_307_10521280_5_30083 Sorghum met... 101 8e-021
gb|CW417496.1|CW417496 fsbb001f120i17k0 Sorghum methylation... 65 9e-021
>gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 547
Score = 122 bits (262), Expect(5) = 2e-061
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN* 210
MQ+SWG VWR NSGA LQ PFSVRLTSGSGRTVVA++VIPAGW+PGATYRSVVNF+N*
Sbjct: 187 MQRSWGAVWRYNSGAALQAPFSVRLTSGSGRTVVATNVIPAGWSPGATYRSVVNFNN* 360
Score = 119 bits (255), Expect(5) = 2e-058
Identities = 49/58 (84%), Positives = 51/58 (87%)
Frame = +1 / -3
Query: 211 *LLKLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
*LLKLTTERYVAPG HPAGMT +ATTVLPEP+VRRTEKG CR APEL LHT PHD CI
Sbjct: 359 *LLKLTTERYVAPGDHPAGMTLVATTVLPEPEVRRTEKGACRAAPELYLHTAPHDRCI 186
Score = 115 bits (245), Expect(5) = 2e-061
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = -2 / +1
Query: 581 SAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
S G L+IQY RVPC+WNGMDIAFKVD GSNANYL VL+EYESGDGELRSVELMQ
Sbjct: 1 SPGLLKIQYTRVPCNWNGMDIAFKVDGGSNANYLPVLIEYESGDGELRSVELMQ 162
Score = 114 bits (243), Expect(5) = 2e-058
Identities = 47/54 (87%), Positives = 48/54 (88%)
Frame = +3 / -2
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGA 581
LHELHGP+LAVAGLVLDQHRQVVRVR VHLERDVHPVP ARHP VLD E SGA
Sbjct: 162 LHELHGPQLAVAGLVLDQHRQVVRVRPAVHLERDVHPVPVARHPSVLDLEESGA 1
Score = 73.0 bits (153), Expect(4) = 2e-026
Identities = 30/52 (57%), Positives = 31/52 (59%)
Frame = +1 / -3
Query: 421 CMXXXXXXXXXXXXXXXXXAK*FAFEPASTLNAMSIPFQLHGTRXYWILRRP 576
CM K*FAF+P STLNAMSIPFQLHGTR YWILR P
Sbjct: 161 CMSSTDLSSPSPDSYSISTGK*FAFDPPSTLNAMSIPFQLHGTRVYWILRSP 6
Score = 69.3 bits (145), Expect(4) = 1e-021
Identities = 33/49 (67%), Positives = 34/49 (69%)
Frame = -1 / +3
Query: 357 EVQLRRHPAGALLRPPHVGLXXXXXXXXXXXXGVDARRHVPLGRQLQQL 211
EVQLRR PAGALLRPPH+ L GV ARRHVPLGRQLQQL
Sbjct: 213 EVQLRRRPAGALLRPPHLRLRQDGRGHQRHPRGVVARRHVPLGRQLQQL 359
Score = 47.8 bits (98), Expect(4) = 2e-026
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = +3 / -2
Query: 279 GDDRPAGARREADGEGPLQGGAGV 350
G DRPAGA EADGEG LQGGAGV
Sbjct: 291 GHDRPAGAGGEADGEGRLQGGAGV 220
Score = 44.1 bits (90), Expect(4) = 1e-021
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1 / +3
Query: 576 RTPQDPVXPGAVQLERDGH 520
RTPQDPV GAVQLERDGH
Sbjct: 6 RTPQDPVHSGAVQLERDGH 62
Score = 33.1 bits (66), Expect(4) = 2e-026
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2 / -1
Query: 158 GGGRARAHLHLFCYSAIVSC*S*RPSGTW 244
G RA + S ++SC*S*RPSGTW
Sbjct: 412 GRARACTRTYDASGSRLISC*S*RPSGTW 326
Score = 24.9 bits (48), Expect(5) = 2e-061
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 91 PYRRLVCTVACVT 53
P L+CTVACVT
Sbjct: 476 PTTTLLCTVACVT 514
Score = 24.9 bits (48), Expect(5) = 2e-061
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1 / +3
Query: 129 WLGL*FELCVCLY 91
WLGL*FEL V Y
Sbjct: 432 WLGL*FELAVRAY 470
Score = 24.0 bits (46), Expect(5) = 2e-058
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 101 THSSNHKPSQ 130
T SSNHKPSQ
Sbjct: 460 TASSNHKPSQ 431
Score = 23.5 bits (45), Expect(5) = 2e-061
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +1
Query: 27 RVSPEWRV 4
RVSPEWRV
Sbjct: 520 RVSPEWRV 543
Score = 23.5 bits (45), Expect(4) = 1e-021
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 77 SVYCCVRD 54
+VYCCVRD
Sbjct: 490 TVYCCVRD 513
Score = 22.6 bits (43), Expect(4) = 1e-021
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / +2
Query: 130 LAWFMIRA 107
LAWFMIRA
Sbjct: 431 LAWFMIRA 454
Score = 22.1 bits (42), Expect(5) = 2e-058
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / -1
Query: 53 CHARNSTH* 79
CHARNST *
Sbjct: 514 CHARNSTQ* 488
Score = 21.7 bits (41), Expect(4) = 2e-026
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1 / -3
Query: 31 GDCADLHMSRTQQYTLSVGTV*AHAQLES*TKPA 132
GD L ++ S V H+ LES*TKP+
Sbjct: 530 GDTR*LSRTQQYTVASSSAGVGTHS*LES*TKPS 429
Score = 21.7 bits (41), Expect(5) = 2e-058
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2 / -3
Query: 2 RTRHSGETR 28
+TRHSG+TR
Sbjct: 545 QTRHSGDTR 519
>gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 133 bits (285), Expect(3) = 3e-049
Identities = 50/65 (76%), Positives = 61/65 (93%)
Frame = -2 / +1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPGQADQLR+ GRL +QY RVPC+WNG+D+AF+VDAGSNANYLA+ +EYE+GDG+L
Sbjct: 79 GAMAKPGQADQLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDL 258
Query: 440 RSVEL 426
R+VEL
Sbjct: 259 RAVEL 273
Score = 100 bits (212), Expect(2) = 6e-035
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = +3 / -3
Query: 426 ELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVGLAG 605
+LHG ++ V GLVLD H QVV VRAGVH E VH VP ARHP VLD EA+ +ELVGLAG
Sbjct: 273 QLHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPSVLDWEAADVSELVGLAG 94
Query: 606 LRHGS 620
RHG+
Sbjct: 93 FRHGT 79
Score = 96.8 bits (205), Expect(2) = 9e-022
Identities = 38/48 (79%), Positives = 39/48 (81%)
Frame = +1 / -1
Query: 478 AK*FAFEPASTLNAMSIPFQLHGTRXYWILRRPALRSWSAWPGFAMAP 621
A+* AFEPASTL A S PFQLHGTR YW RRP RSWSAWPGFAMAP
Sbjct: 221 AR*LAFEPASTLKATSTPFQLHGTRVYWTGRRPTFRSWSAWPGFAMAP 78
Score = 74.4 bits (156), Expect(3) = 3e-049
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -2 / +1
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
++ + + P SVRLTSGSG+T+VAS VIPAGW PG TYRSVVNF
Sbjct: 331 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNF 471
Score = 68.9 bits (144), Expect(2) = 6e-035
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1 / -1
Query: 220 KLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKG 327
KLTTER V PG HPAGMT LAT VLPEP+VRRT++G
Sbjct: 470 KLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 363
Score = 29.0 bits (57), Expect(2) = 9e-022
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3 / -3
Query: 204 PSLVAEVDXXXXXXXXXXXXXXXXAGDDRPAGARREADGEG 326
PS+ +EVD AGD+ AGA EAD +G
Sbjct: 486 PSVSSEVDDGAVGVAGLPSGGDDAAGDEGLAGAGGEADRQG 364
Score = 27.2 bits (53), Expect(3) = 3e-049
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGAT 336
M++SWG VWR S +
Sbjct: 301 MERSWGAVWRYQSSGS 348
>gb|BG049047.1|BG049047 OV1_22_E11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 566
Score = 128 bits (275), Expect(3) = 7e-048
Identities = 48/63 (76%), Positives = 59/63 (93%)
Frame = -2 / +3
Query: 614 MAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRS 435
MAKPGQADQLR+ GRL +QY RVPC+WNG+D+AF+VDAGSNANYLA+ +EYE+GDG+LR+
Sbjct: 6 MAKPGQADQLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRA 185
Query: 434 VEL 426
VEL
Sbjct: 186 VEL 194
Score = 99.6 bits (211), Expect(2) = 8e-035
Identities = 43/64 (67%), Positives = 48/64 (75%)
Frame = +3 / -1
Query: 426 ELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVGLAG 605
+LHG ++ V GLVLD H QVV VRAGVH E VH VP ARHP VLD EA+ +ELVGLAG
Sbjct: 194 QLHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPSVLDWEAADVSELVGLAG 15
Query: 606 LRHG 617
RHG
Sbjct: 14 FRHG 3
Score = 74.4 bits (156), Expect(3) = 7e-048
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -2 / +3
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
++ + + P SVRLTSGSG+T+VAS VIPAGW PG TYRSVVNF
Sbjct: 252 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNF 392
Score = 68.9 bits (144), Expect(2) = 8e-035
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 220 KLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKG 327
KLTTER V PG HPAGMT LAT VLPEP+VRRT++G
Sbjct: 391 KLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 284
Score = 27.2 bits (53), Expect(3) = 7e-048
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGAT 336
M++SWG VWR S +
Sbjct: 222 MERSWGAVWRYQSSGS 269
>gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218800, DNA
sequence
Length = 644
Score = 90.9 bits (192), Expect(4) = 9e-046
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = -2 / -2
Query: 566 RIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVEL 426
R + RVPC+WNG+D+AF+VDAGSNANYLA+ +EYE+GDG+LR+VEL
Sbjct: 382 RCLHCRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVEL 242
Score = 74.4 bits (156), Expect(4) = 9e-046
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -2 / -2
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
++ + + P SVRLTSGSG+T+VAS VIPAGW PG TYRSVVNF
Sbjct: 184 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNF 44
Score = 68.9 bits (144), Expect(3) = 3e-036
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1 / +3
Query: 220 KLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKG 327
KLTTER V PG HPAGMT LAT VLPEP+VRRT++G
Sbjct: 45 KLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 152
Score = 68.4 bits (143), Expect(3) = 3e-036
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = +3 / +2
Query: 426 ELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGV 557
+LHG ++ V GLVLD H QVV VRAGVH E VH VP ARHP V
Sbjct: 242 QLHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPAV 373
Score = 54.2 bits (112), Expect(3) = 3e-036
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1 / +2
Query: 550 RXYWILRRPALRSWSAWPGFAMAP 621
R YW RRP RSWSAWPGFAMAP
Sbjct: 482 RVYWTGRRPTFRSWSAWPGFAMAP 553
Score = 48.7 bits (100), Expect(4) = 9e-046
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXR 549
GAMAKPGQADQLR+ GRL +QY R
Sbjct: 552 GAMAKPGQADQLRNVGRLPVQYTR 481
Score = 27.2 bits (53), Expect(4) = 9e-046
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 383 MQQSWGXVWRXNSGAT 336
M++SWG VWR S +
Sbjct: 214 MERSWGAVWRYQSSGS 167
>gb|CN136626.1|CN136626 OX1_44_G12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_44_G12_A002 3', mRNA sequence
Length = 795
Score = 112 bits (240), Expect(2) = 1e-044
Identities = 43/67 (64%), Positives = 54/67 (80%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG ADQLR+AG L+IQY RV C W G+D+ F VD+GSN NYLAVL+EYE + +L
Sbjct: 83 GAMAKPGMADQLRAAGLLQIQYTRVQCEWPGVDVTFSVDSGSNPNYLAVLIEYEDSESDL 262
Query: 440 RSVELMQ 420
+V++MQ
Sbjct: 263 SAVDIMQ 283
Score = 88.6 bits (187), Expect(2) = 1e-044
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRS 231
MQ SWG +WR +SG+ L GPF +RLT SGR ++AS+ IPAGWTPG YR+
Sbjct: 308 MQHSWGAIWRLDSGSALHGPFHLRLTFSSGRVLIASNAIPAGWTPGVAYRA 460
Score = 73.5 bits (154), Expect(2) = 3e-027
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +1 / -1
Query: 235 RYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
RY PGVHPAGM LA + LPE +VRR GP R PE L PH+CCI
Sbjct: 456 RYATPGVHPAGMALLAMSTLPELNVRRRWNGP*RAEPESSLQIAPHECCI 307
Score = 69.3 bits (145), Expect(2) = 3e-027
Identities = 32/67 (47%), Positives = 33/67 (49%)
Frame = +1 / -1
Query: 421 CMXXXXXXXXXXXXXXXXXAK*FAFEPASTLNAMSIPFQLHGTRXYWILRRPALRSWSAW 600
CM A+*F FEP ST S P H TR YWI RPA RS SA
Sbjct: 282 CMMSTAERSLSLSSYSISTAR*FGFEPESTEKVTSTPGHSHCTRVYWICSRPAARS*SAI 103
Query: 601 PGFAMAP 621
PGFAMAP
Sbjct: 102 PGFAMAP 82
>gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_F08_A002 3', mRNA sequence
Length = 730
Score = 109 bits (232), Expect(3) = 2e-043
Identities = 43/67 (64%), Positives = 56/67 (83%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG AD+LR+AG L++QY RVPC ++G++IAF+VD GSN YL VLVE+E GDG+L
Sbjct: 21 GAMAKPGMADKLRAAGILKVQYKRVPCKYSGVNIAFRVDQGSNPLYLEVLVEFEDGDGDL 200
Query: 440 RSVELMQ 420
+V LM+
Sbjct: 201 SAVNLME 221
Score = 80.8 bits (170), Expect(2) = 5e-028
Identities = 39/68 (57%), Positives = 46/68 (67%)
Frame = +3 / -3
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++HG E+AVA L L QH + V A VH E DVH ARHP VLD +G A+LVG
Sbjct: 224 GLHQVHGAEVAVAVLELHQHL*IQWVGALVHPESDVHAAVLARHPLVLDL*DTGGAKLVG 45
Query: 597 LAGLRHGS 620
AGLRHG+
Sbjct: 44 HAGLRHGA 21
Score = 79.4 bits (167), Expect(3) = 2e-043
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = -2 / +3
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
+ N+G L+ PFS RLTS SG+ +VA++VIPAGW PGATYRS+VN+S
Sbjct: 276 YNSNTGKALKAPFSFRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS 419
Score = 64.8 bits (135), Expect(2) = 5e-028
Identities = 28/44 (63%), Positives = 30/44 (68%)
Frame = +1 / -1
Query: 226 TTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXL 357
T ERYVAPG PAGMT LAT+ LPE +VRR EKG P L L
Sbjct: 409 TRERYVAPGFQPAGMTLLATSTLPESEVRRNEKGALSALPVLEL 278
Score = 26.7 bits (52), Expect(3) = 2e-043
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNS 345
M Q+WG +WR NS
Sbjct: 246 MVQNWGALWRYNS 284
>gb|CW233768.1|CW233768 104_687_11213622_116_37380_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11213622, DNA
sequence
Length = 712
Score = 90.0 bits (190), Expect(4) = 3e-043
Identities = 32/42 (76%), Positives = 41/42 (97%)
Frame = -2 / -2
Query: 551 RVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVEL 426
RVPC+WNG+D+AF+VDAGSNANYLA+ +EYE+GDG+LR+VEL
Sbjct: 525 RVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVEL 400
Score = 72.1 bits (151), Expect(4) = 3e-043
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = -2 / -2
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
++ + + P SVRLTSGSG+T+VAS VIPAGW PG TYR VVNF
Sbjct: 342 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRCVVNF 202
Score = 67.5 bits (141), Expect(3) = 5e-034
Identities = 27/36 (75%), Positives = 31/36 (86%)
Frame = +1 / +2
Query: 220 KLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKG 327
KLTT+R V PG HPAGMT LAT VLPEP+VRRT++G
Sbjct: 203 KLTTQR*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 310
Score = 66.6 bits (139), Expect(3) = 5e-034
Identities = 28/42 (66%), Positives = 31/42 (73%)
Frame = +3 / +1
Query: 426 ELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHP 551
+LHG ++ V GLVLD H QVV VRAGVH E VH VP ARHP
Sbjct: 400 QLHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHP 525
Score = 49.6 bits (102), Expect(3) = 5e-034
Identities = 17/24 (70%), Positives = 17/24 (70%)
Frame = +1 / +3
Query: 550 RXYWILRRPALRSWSAWPGFAMAP 621
R YW RRP RSW WPGFAMAP
Sbjct: 636 RVYWTGRRPTFRSWVGWPGFAMAP 707
Score = 43.2 bits (88), Expect(4) = 3e-043
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXR 549
GAMAKPGQ QLR+ GRL +QY R
Sbjct: 706 GAMAKPGQPTQLRNVGRLPVQYTR 635
Score = 27.2 bits (53), Expect(4) = 3e-043
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -2
Query: 383 MQQSWGXVWRXNSGAT 336
M++SWG VWR S +
Sbjct: 372 MERSWGAVWRYQSSGS 325
>gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 1256
Score = 107 bits (228), Expect(3) = 4e-043
Identities = 41/67 (61%), Positives = 56/67 (83%)
Frame = -2 / -3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG AD++R+AG L++QY RVPC ++G++IAF+VD GSN Y VLVE+E GDG+L
Sbjct: 729 GAMAKPGMADKIRAAGILKVQYKRVPCKYSGVNIAFRVDQGSNPFYFEVLVEFEDGDGDL 550
Query: 440 RSVELMQ 420
+V+LM+
Sbjct: 549 SAVDLME 529
Score = 89.0 bits (188), Expect(2) = 4e-031
Identities = 42/68 (61%), Positives = 48/68 (70%)
Frame = +3 / +1
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++HG E+AVA L L QH +V VRA VH ERDVH ARHP VLD +G A LVG
Sbjct: 526 GLHQVHGAEVAVAVLELHQHLKVEWVRALVHPERDVHAAVLARHPLVLDL*DTGGANLVG 705
Query: 597 LAGLRHGS 620
AGLRHG+
Sbjct: 706 HAGLRHGA 729
Score = 80.3 bits (169), Expect(3) = 4e-043
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = -2 / -3
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
+ N+G L+ PFS+RLTS SG+ +VA++VIPAGW PGATYRS+VN+S
Sbjct: 474 YNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS 331
Score = 67.0 bits (140), Expect(2) = 4e-031
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1 / +2
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXL 357
LT ERYVAPG PAGMT LAT+ LPE +VRR+EKG P L L
Sbjct: 338 LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL 472
Score = 26.7 bits (52), Expect(3) = 4e-043
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 383 MQQSWGXVWRXNS 345
M Q+WG +WR NS
Sbjct: 504 MVQNWGALWRYNS 466
>gb|BG049025.1|BG049025 OV1_22_C07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 386
Score = 109 bits (233), Expect(3) = 2e-041
Identities = 40/55 (72%), Positives = 51/55 (92%)
Frame = -2 / +1
Query: 590 QLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVEL 426
QLR+ GRL +QY RVPC+WNG+D+AF+VDAGSNANYLA+ +EYE+GDG+LR+VEL
Sbjct: 1 QLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVEL 165
Score = 79.9 bits (168), Expect(2) = 6e-029
Identities = 35/55 (63%), Positives = 40/55 (72%)
Frame = +3 / -3
Query: 426 ELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAEL 590
+LHG ++ V GLVLD H QVV VRAGVH E VH VP ARHP VLD EA+ +EL
Sbjct: 165 QLHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPSVLDWEAADVSEL 1
Score = 73.9 bits (155), Expect(3) = 2e-041
Identities = 30/36 (83%), Positives = 32/36 (88%)
Frame = -2 / +3
Query: 326 PFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
P SVRLTSGSG+T+VAS VIPAGW PG TYRSVVNF
Sbjct: 258 PLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNF 365
Score = 68.9 bits (144), Expect(2) = 6e-029
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 220 KLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKG 327
KLTTER V PG HPAGMT LAT VLPEP+VRRT++G
Sbjct: 364 KLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 257
Score = 25.4 bits (49), Expect(3) = 2e-041
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 383 MQQSWGXVWR 354
M++SWG VWR
Sbjct: 193 MERSWGAVWR 222
>gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148g13, DNA
sequence
Length = 768
Score = 80.3 bits (169), Expect(4) = 2e-040
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = -2 / -2
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
+ N+G L+ PFS+RLTS SG+ +VA++VIPAGW PGATYRS+VN+S
Sbjct: 182 YNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS 39
Score = 71.2 bits (149), Expect(4) = 2e-040
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = -2 / -2
Query: 551 RVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
RVPC ++G++IAF+VD GSN YL VLVE+E GDG+L +V+LM+
Sbjct: 368 RVPCKYSGVNIAFRVDQGSNPFYLEVLVEFEDGDGDLSAVDLME 237
Score = 67.0 bits (140), Expect(3) = 1e-028
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1 / +1
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXL 357
LT ERYVAPG PAGMT LAT+ LPE +VRR+EKG P L L
Sbjct: 46 LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL 180
Score = 58.3 bits (121), Expect(3) = 1e-028
Identities = 27/45 (60%), Positives = 30/45 (66%)
Frame = +3 / +3
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHP 551
GLH++HG E+AVA L L QH QV V A VH E DVH ARHP
Sbjct: 234 GLHQVHGAEVAVAVLELHQHLQVEWVGALVHPEGDVHAAVLARHP 368
Score = 44.6 bits (91), Expect(4) = 2e-040
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -2 / -3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXR 549
GAMAKPG AD+LR+AG L+IQY R
Sbjct: 559 GAMAKPGMADRLRAAGILKIQYKR 488
Score = 42.8 bits (87), Expect(3) = 1e-028
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +1 / +3
Query: 556 YWILRRPALRSWSAWPGFAMAP 621
YWILR PA RS SA PG AMAP
Sbjct: 495 YWILRMPAARSLSAMPGLAMAP 560
Score = 26.7 bits (52), Expect(4) = 2e-040
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / -2
Query: 383 MQQSWGXVWRXNS 345
M Q+WG +WR NS
Sbjct: 212 MVQNWGALWRYNS 174
>gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808375, DNA
sequence
Length = 758
Score = 80.3 bits (169), Expect(4) = 2e-040
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = -2 / +1
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
+ N+G L+ PFS+RLTS SG+ +VA++VIPAGW PGATYRS+VN+S
Sbjct: 469 YNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS 612
Score = 71.6 bits (150), Expect(4) = 2e-040
Identities = 28/50 (56%), Positives = 39/50 (78%)
Frame = -2 / +1
Query: 569 LRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
LR+ RVPC ++G++IAF+VD GSN Y VLVE+E GDG+L +V+LM+
Sbjct: 265 LRLICRRVPCKYSGVNIAFRVDQGSNPFYFEVLVEFEDGDGDLSAVDLME 414
Score = 65.2 bits (136), Expect(3) = 8e-028
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +1 / -1
Query: 226 TTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXL 357
T ERYVAPG PAGMT LAT+ LPE +VRR+EKG P L L
Sbjct: 602 TRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL 471
Score = 57.0 bits (118), Expect(3) = 8e-028
Identities = 26/45 (57%), Positives = 30/45 (66%)
Frame = +3 / -3
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHP 551
GLH++HG E+AVA L L QH +V V A VH E DVH ARHP
Sbjct: 417 GLHQVHGAEVAVAVLELHQHLEVEWVGALVHPEGDVHAAVLARHP 283
Score = 44.1 bits (90), Expect(4) = 2e-040
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = -2 / +1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXR 549
GAMAKPG AD+LR+AG L++QY R
Sbjct: 136 GAMAKPGMADKLRAAGILKVQYKR 207
Score = 40.5 bits (82), Expect(3) = 8e-028
Identities = 16/22 (72%), Positives = 16/22 (72%)
Frame = +1 / -1
Query: 556 YWILRRPALRSWSAWPGFAMAP 621
YW R PA RS SA PGFAMAP
Sbjct: 200 YWTFRIPAARSLSAMPGFAMAP 135
Score = 26.7 bits (52), Expect(4) = 2e-040
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNS 345
M Q+WG +WR NS
Sbjct: 439 MVQNWGALWRYNS 477
>gb|CW155769.1|CW155769 104_558_11146316_116_36370_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146316, DNA
sequence
Length = 719
Score = 88.6 bits (187), Expect(3) = 3e-040
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRS 231
MQ SWG +WR +SG+ L GPF +RLT SGR ++AS+ IPAGWTPG YR+
Sbjct: 416 MQHSWGAIWRLDSGSALHGPFHLRLTFSSGRVLIASNAIPAGWTPGVAYRA 568
Score = 73.5 bits (154), Expect(3) = 1e-027
Identities = 29/50 (58%), Positives = 32/50 (64%)
Frame = +1 / -3
Query: 235 RYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
RY PGVHPAGM LA + LPE +VRR GP R PE L PH+CCI
Sbjct: 564 RYATPGVHPAGMALLAMSTLPELNVRRRWNGP*RAEPESSLQIAPHECCI 415
Score = 69.3 bits (145), Expect(3) = 3e-040
Identities = 25/50 (50%), Positives = 35/50 (70%)
Frame = -2 / +2
Query: 569 LRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
+ I V C W G+D+ F VD+GSN NYLAVL+EYE + +L +V++MQ
Sbjct: 242 MHIWIYSVQCEWPGVDVTFSVDSGSNPNYLAVLIEYEDSESDLSAVDIMQ 391
Score = 47.8 bits (98), Expect(3) = 1e-027
Identities = 21/43 (48%), Positives = 29/43 (67%)
Frame = +3 / -2
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARH 548
LH++ G ++A LVLDQH Q+VRVRA V+ E ++ P A H
Sbjct: 391 LHDVDGRKIAFTVLVLDQHSQIVRVRARVNRESYINSRPFALH 263
Score = 46.9 bits (96), Expect(3) = 3e-040
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXR 549
GAMAKPG ADQLR+AG L+IQY R
Sbjct: 57 GAMAKPGMADQLRAAGLLQIQYTR 128
Score = 43.2 bits (88), Expect(3) = 1e-027
Identities = 18/24 (75%), Positives = 18/24 (75%)
Frame = +1 / -2
Query: 550 RXYWILRRPALRSWSAWPGFAMAP 621
R YWI RPA RS SA PGFAMAP
Sbjct: 127 RVYWICSRPAARS*SAIPGFAMAP 56
>gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 99.1 bits (210), Expect(2) = 3e-039
Identities = 38/67 (56%), Positives = 53/67 (79%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMA+PG AD+LR+ G LRI Y RVPC + G+++AFKVD G+N Y VL+E+E DG+L
Sbjct: 32 GAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVDQGANPFYFDVLIEFEDDDGDL 211
Query: 440 RSVELMQ 420
++V+LM+
Sbjct: 212 KAVDLME 232
Score = 94.5 bits (200), Expect(2) = 4e-029
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = +3 / -2
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++ G E+AV L LDQH +V RVRA VHLERDVH ARHP V DPE + +AELVG
Sbjct: 235 GLHQVDGLEVAVVVLELDQHVEVERVRALVHLERDVHAGVLARHPPVQDPEHAASAELVG 56
Query: 597 LAGLRHGS 620
AG RHG+
Sbjct: 55 HAGPRHGA 32
Score = 84.0 bits (177), Expect(2) = 3e-039
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M +WG WR N+G L+ PF +RLTS SGR +VA++ IPA W PG YRS+VN+
Sbjct: 257 MAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNY 421
Score = 54.7 bits (113), Expect(2) = 4e-029
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +1 / -3
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
LT ER PG H AGM LAT+ LPE +V R+ G + P L H P C +
Sbjct: 417 LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAM 256
>gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_A04_A002 3', mRNA sequence
Length = 622
Score = 99.1 bits (210), Expect(2) = 3e-039
Identities = 38/67 (56%), Positives = 53/67 (79%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMA+PG AD+LR+ G LRI Y RVPC + G+++AFKVD G+N Y VL+E+E DG+L
Sbjct: 5 GAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVDQGANPFYFDVLIEFEDDDGDL 184
Query: 440 RSVELMQ 420
++V+LM+
Sbjct: 185 KAVDLME 205
Score = 94.5 bits (200), Expect(2) = 8e-029
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = +3 / -1
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++ G E+AV L LDQH +V RVRA VHLERDVH ARHP V DPE + +AELVG
Sbjct: 208 GLHQVDGLEVAVVVLELDQHVEVERVRALVHLERDVHAGVLARHPPVQDPEHAASAELVG 29
Query: 597 LAGLRHGS 620
AG RHG+
Sbjct: 28 HAGPRHGA 5
Score = 84.0 bits (177), Expect(2) = 3e-039
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M +WG WR N+G L+ PF +RLTS SGR +VA++ IPA W PG YRS+VN+
Sbjct: 230 MAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGQAYRSLVNY 394
Score = 53.8 bits (111), Expect(2) = 8e-029
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +1 / -2
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
LT ER PG H AGM LAT+ LPE +V R+ G + P L H P C +
Sbjct: 390 LTKER*AWPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAM 229
>gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 605
Score = 97.3 bits (206), Expect(2) = 1e-038
Identities = 38/67 (56%), Positives = 53/67 (79%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN+ YLAVLVE+E GDG++
Sbjct: 131 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNSVYLAVLVEFEDGDGDV 310
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 311 VQVDLME 331
Score = 84.0 bits (177), Expect(2) = 1e-038
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +S LQ PFS+R+T+ SGRT+VA+ VIPA W P YRS++ +
Sbjct: 356 MRESWGSIWRLDSNHRLQAPFSLRITNESGRTLVANQVIPANWVPNTYYRSIIQY 520
>gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188j04, DNA
sequence
Length = 648
Score = 95.0 bits (201), Expect(2) = 9e-038
Identities = 37/67 (55%), Positives = 52/67 (77%)
Frame = -2 / -3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMA+PG AD+LR+ G LRI Y RVPC + G+++AFKV G+N Y VL+E+E DG+L
Sbjct: 574 GAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVYQGANPFYFDVLIEFEDDDGDL 395
Query: 440 RSVELMQ 420
++V+LM+
Sbjct: 394 KAVDLME 374
Score = 94.5 bits (200), Expect(2) = 3e-028
Identities = 43/68 (63%), Positives = 50/68 (73%)
Frame = +3 / +2
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++ G E+AV L LDQH +V RVRA VHLERDVH ARHP V DPE + +AELVG
Sbjct: 371 GLHQVDGLEVAVVVLELDQHVEVERVRALVHLERDVHAGVLARHPPVQDPEHAASAELVG 550
Query: 597 LAGLRHGS 620
AG RHG+
Sbjct: 551 HAGPRHGA 574
Score = 83.1 bits (175), Expect(2) = 9e-038
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = -2 / -3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M +WG WR N+G L+ PF +RLTS SGR +VA++ IPA W PG YRS+VN+
Sbjct: 349 MALNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNY 185
Score = 51.9 bits (107), Expect(2) = 3e-028
Identities = 23/49 (46%), Positives = 27/49 (55%)
Frame = +1 / +3
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXP 369
LT ER PG H AGM LAT+ LPE +V R+ G + P L H P
Sbjct: 189 LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAP 335
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 94.5 bits (200), Expect(2) = 1e-037
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / +1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 124 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 303
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 304 VQVDLME 324
Score = 83.1 bits (175), Expect(2) = 1e-037
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+V +
Sbjct: 349 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 513
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 94.5 bits (200), Expect(2) = 1e-037
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 165 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 344
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 345 VQVDLME 365
Score = 83.1 bits (175), Expect(2) = 1e-037
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+V +
Sbjct: 390 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 554
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 94.5 bits (200), Expect(2) = 1e-037
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / -3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 694 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 515
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 514 VQVDLME 494
Score = 83.1 bits (175), Expect(2) = 1e-037
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / -3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+V +
Sbjct: 469 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 305
>gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 94.5 bits (200), Expect(2) = 1e-037
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 8 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 187
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 188 VQVDLME 208
Score = 83.1 bits (175), Expect(2) = 1e-037
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+V +
Sbjct: 233 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 397
>gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 94.5 bits (200), Expect(2) = 1e-037
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 8 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 187
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 188 VQVDLME 208
Score = 83.1 bits (175), Expect(2) = 1e-037
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+V +
Sbjct: 233 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 397
>gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_G11_A002 3', mRNA sequence
Length = 781
Score = 94.5 bits (200), Expect(2) = 2e-037
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 110 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 289
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 290 VQVDLME 310
Score = 82.6 bits (174), Expect(2) = 2e-037
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+V +
Sbjct: 335 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNPYYRSIVQY 499
>gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f151h04, DNA
sequence
Length = 598
Score = 155 bits (333), Expect = 6e-037
Identities = 61/107 (57%), Positives = 74/107 (69%)
Frame = -2 / -2
Query: 551 RVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQXXXXXXXXXXXPMQQS 372
RV C W G+D+ F V++GSN NYLAVL+EYE D +L SV++MQ PMQQS
Sbjct: 483 RVQCEWPGVDVTFSVESGSNPNYLAVLIEYEDSDSDLYSVDIMQQGQGGTTGQWVPMQQS 304
Query: 371 WGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRS 231
WG VW+ NSGA LQGPF++RLT SGR +VA + IPAGW G YRS
Sbjct: 303 WGAVWKINSGAVLQGPFNIRLTFSSGRVLVAGNAIPAGWNAGVAYRS 163
Score = 82.2 bits (173), Expect(2) = 3e-029
Identities = 32/51 (62%), Positives = 34/51 (66%)
Frame = +1 / +2
Query: 232 ERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
+RY P HPAGM AT+ LPE VRR KGP R APEL HT PHDCCI
Sbjct: 164 DRYATPAFHPAGMALPATSTLPELKVRRMLKGPWRTAPELIFHTAPHDCCI 316
Score = 67.5 bits (141), Expect(2) = 3e-029
Identities = 29/44 (65%), Positives = 33/44 (75%)
Frame = +3 / +1
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHP 551
LH++HG E+AVA LVLDQH QVVRV AG+H E VH P A HP
Sbjct: 352 LHDVHGVEVAVAVLVLDQHGQVVRVGAGLHREGHVHARPLALHP 483
>gb|CW253166.1|CW253166 104_716_11224935_116_35104_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224935, DNA
sequence
Length = 674
Score = 90.4 bits (191), Expect(2) = 6e-037
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = -2 / -3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M +WG WR N+G L+ PF +RLTS SGR +VAS+ IPA WTPG TYRS+VN+
Sbjct: 441 MAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNY 277
Score = 84.9 bits (179), Expect(2) = 6e-037
Identities = 31/61 (50%), Positives = 47/61 (77%)
Frame = -2 / -3
Query: 602 GQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELM 423
G AD++R+ G +R+QY RVPC + G+++AFKVD G+N Y VL+E+E DG+L +V+LM
Sbjct: 648 GMADKVRAGGVVRVQYRRVPCKYPGVNVAFKVDQGANPFYFNVLIEFEDDDGDLSAVDLM 469
Query: 422 Q 420
+
Sbjct: 468 E 466
Score = 75.8 bits (159), Expect(2) = 1e-024
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = +3 / +1
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++ G E+AV L LD+H +V RV A VHLE DVH ARHP VLDP + A+LVG
Sbjct: 463 GLHQVDGAEVAVVVLELDEHVEVERVGALVHLEGDVHAGVLARHPPVLDPHDAAGADLVG 642
Query: 597 LA 602
A
Sbjct: 643 HA 648
Score = 58.8 bits (122), Expect(2) = 1e-024
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +1 / +2
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
LT ER V PGVH AGM LAT+ LPE +V R+ G + P L H P C +
Sbjct: 281 LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAM 442
>gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f054l06, DNA
sequence
Length = 588
Score = 90.4 bits (191), Expect(2) = 6e-037
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M +WG WR N+G L+ PF +RLTS SGR +VAS+ IPA WTPG TYRS+VN+
Sbjct: 353 MAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNY 517
Score = 84.9 bits (179), Expect(2) = 6e-037
Identities = 31/61 (50%), Positives = 47/61 (77%)
Frame = -2 / +2
Query: 602 GQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELM 423
G AD++R+ G +R+QY RVPC + G+++AFKVD G+N Y VL+E+E DG+L +V+LM
Sbjct: 146 GMADKVRAGGVVRVQYRRVPCKYPGVNVAFKVDQGANPFYFNVLIEFEDDDGDLSAVDLM 325
Query: 422 Q 420
+
Sbjct: 326 E 328
Score = 75.8 bits (159), Expect(2) = 1e-024
Identities = 35/62 (56%), Positives = 42/62 (67%)
Frame = +3 / -3
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++ G E+AV L LD+H +V RV A VHLE DVH ARHP VLDP + A+LVG
Sbjct: 331 GLHQVDGAEVAVVVLELDEHVEVERVGALVHLEGDVHAGVLARHPPVLDPHDAAGADLVG 152
Query: 597 LA 602
A
Sbjct: 151 HA 146
Score = 58.8 bits (122), Expect(2) = 1e-024
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +1 / -1
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
LT ER V PGVH AGM LAT+ LPE +V R+ G + P L H P C +
Sbjct: 513 LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAM 352
>gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 5', mRNA sequence
Length = 677
Score = 94.5 bits (200), Expect(2) = 1e-036
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / +1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 295 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 474
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 475 VQVDLME 495
Score = 79.9 bits (168), Expect(2) = 1e-036
Identities = 28/52 (53%), Positives = 39/52 (75%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSV 228
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+
Sbjct: 520 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSI 675
>gb|BZ339450.1|BZ339450 ic32c10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic32c10 5', DNA sequence
Length = 683
Score = 90.9 bits (192), Expect(3) = 1e-036
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = -2 / +3
Query: 566 RIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVEL 426
R + RVPC+WNG+D+AF+VDAGSNANYLA+ +EYE+GDG+LR+VEL
Sbjct: 45 RCLHCRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVEL 185
Score = 74.4 bits (156), Expect(3) = 1e-036
Identities = 30/47 (63%), Positives = 36/47 (76%)
Frame = -2 / +3
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
++ + + P SVRLTSGSG+T+VAS VIPAGW PG TYRSVVNF
Sbjct: 243 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRSVVNF 383
Score = 68.9 bits (144), Expect(2) = 1e-025
Identities = 28/36 (77%), Positives = 31/36 (86%)
Frame = +1 / -2
Query: 220 KLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKG 327
KLTTER V PG HPAGMT LAT VLPEP+VRRT++G
Sbjct: 382 KLTTER*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 275
Score = 68.4 bits (143), Expect(2) = 1e-025
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = +3 / -1
Query: 426 ELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGV 557
+LHG ++ V GLVLD H QVV VRAGVH E VH VP ARHP V
Sbjct: 185 QLHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPAV 54
Score = 27.2 bits (53), Expect(3) = 1e-036
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGAT 336
M++SWG VWR S +
Sbjct: 213 MERSWGAVWRYQSSGS 260
>gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475820, DNA
sequence
Length = 668
Score = 91.3 bits (193), Expect(2) = 4e-036
Identities = 36/67 (53%), Positives = 50/67 (74%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAK + D+LR AG + IQ+ RVPC + G+ + F ++ GSN NYLAVLVEY +GDG++
Sbjct: 249 GAMAKDDRNDELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLVEYGNGDGDV 428
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 429 VQVDLME 449
Score = 81.3 bits (171), Expect(2) = 4e-036
Identities = 31/59 (52%), Positives = 42/59 (71%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN*R 207
M++SWG +WR ++ LQGPFS+R+T+ SG+T+VA VIPA W P Y S+V F *R
Sbjct: 492 MRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIVQFD**R 668
>gb|CW268308.1|CW268308 104_739_11401215_116_35306_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11401215, DNA
sequence
Length = 465
Score = 116 bits (247), Expect(4) = 6e-036
Identities = 46/58 (79%), Positives = 51/58 (87%)
Frame = -2 / -3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN* 210
MQ+SWG VWR NSG LQ PFSVR TSGSGRTVVA++VIPAGW+PGATYRSVV F+N*
Sbjct: 388 MQRSWGAVWRYNSGPALQAPFSVRFTSGSGRTVVATNVIPAGWSPGATYRSVVKFNN* 215
Score = 114 bits (243), Expect(3) = 3e-032
Identities = 46/58 (79%), Positives = 49/58 (84%)
Frame = +1 / +3
Query: 211 *LLKLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
*LL LTTERYVAPG HPAGMT +ATTVLPEP+V+RTEKG CR PEL LHT PHD CI
Sbjct: 216 *LLNLTTERYVAPGDHPAGMTLVATTVLPEPEVKRTEKGACRAGPELYLHTAPHDRCI 389
Score = 40.9 bits (83), Expect(3) = 3e-032
Identities = 15/17 (88%), Positives = 17/17 (100%)
Frame = +3 / +2
Query: 420 LHELHGPELAVAGLVLD 470
LHELHGP+LA+AGLVLD
Sbjct: 413 LHELHGPQLAIAGLVLD 463
Score = 40.9 bits (83), Expect(4) = 6e-036
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -2 / -3
Query: 470 VEYESGDGELRSVELMQ 420
+EYESGDGELRSVELMQ
Sbjct: 463 IEYESGDGELRSVELMQ 413
Score = 25.8 bits (50), Expect(4) = 6e-036
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -1
Query: 27 RVSPEWRVR 1
RVSPEWRVR
Sbjct: 54 RVSPEWRVR 28
Score = 24.9 bits (48), Expect(4) = 6e-036
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -2
Query: 91 PYRRLVCTVACVT 53
P L+CTVACVT
Sbjct: 98 PTTTLLCTVACVT 60
Score = 23.5 bits (45), Expect(3) = 3e-032
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +2
Query: 2 RTRHSGETR 28
RTRHSG+TR
Sbjct: 29 RTRHSGDTR 55
>gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195928, DNA
sequence
Length = 715
Score = 151 bits (325), Expect = 7e-036
Identities = 59/104 (56%), Positives = 72/104 (69%)
Frame = -2 / -2
Query: 542 CSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQXXXXXXXXXXXPMQQSWGX 363
C W G+D+ F V++GSN NYLAVL+EYE D +L SV++MQ PMQQSWG
Sbjct: 711 CEWPGVDVTFSVESGSNPNYLAVLIEYEDSDSDLYSVDIMQQGQGGTTGQWVPMQQSWGA 532
Query: 362 VWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRS 231
VW+ NSGA LQGPF++RLT SGR +VA + IPAGW G YRS
Sbjct: 531 VWKINSGAVLQGPFNIRLTFSSGRVLVAGNAIPAGWNAGVAYRS 400
Score = 82.2 bits (173), Expect(2) = 2e-026
Identities = 32/51 (62%), Positives = 34/51 (66%)
Frame = +1 / +2
Query: 232 ERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
+RY P HPAGM AT+ LPE VRR KGP R APEL HT PHDCCI
Sbjct: 401 DRYATPAFHPAGMALPATSTLPELKVRRMLKGPWRTAPELIFHTAPHDCCI 553
Score = 57.9 bits (120), Expect(2) = 2e-026
Identities = 26/41 (63%), Positives = 30/41 (73%)
Frame = +3 / +1
Query: 420 LHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAA 542
LH++HG E+AVA LVLDQH QVVRV A +H E VH P A
Sbjct: 589 LHDVHGVEVAVAVLVLDQHGQVVRVGARLHREGHVHARPLA 711
>gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 585
Score = 87.7 bits (185), Expect(2) = 1e-035
Identities = 34/64 (53%), Positives = 48/64 (75%)
Frame = -2 / +3
Query: 611 AKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSV 432
AKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++ V
Sbjct: 3 AKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDVVQV 182
Query: 431 ELMQ 420
+LM+
Sbjct: 183 DLME 194
Score = 83.1 bits (175), Expect(2) = 1e-035
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P YRS+V +
Sbjct: 219 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 383
>gb|CW241491.1|CW241491 104_700_11218800_116_37544_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218800, DNA
sequence
Length = 641
Score = 90.9 bits (192), Expect(4) = 4e-035
Identities = 33/47 (70%), Positives = 43/47 (91%)
Frame = -2 / +2
Query: 566 RIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVEL 426
R + RVPC+WNG+D+AF+VDAGSNANYLA+ +EYE+GDG+LR+VEL
Sbjct: 350 RCLHCRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVEL 490
Score = 68.4 bits (143), Expect(3) = 2e-027
Identities = 29/44 (65%), Positives = 32/44 (72%)
Frame = +3 / -2
Query: 426 ELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGV 557
+LHG ++ V GLVLD H QVV VRAGVH E VH VP ARHP V
Sbjct: 490 QLHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPAV 359
Score = 54.2 bits (112), Expect(3) = 2e-027
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = +1 / -2
Query: 550 RXYWILRRPALRSWSAWPGFAMAP 621
R YW RRP RSWSAWPGFAMAP
Sbjct: 250 RVYWTGRRPTFRSWSAWPGFAMAP 179
Score = 48.7 bits (100), Expect(4) = 4e-035
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXR 549
GAMAKPGQADQLR+ GRL +QY R
Sbjct: 180 GAMAKPGQADQLRNVGRLPVQYTR 251
Score = 39.1 bits (79), Expect(3) = 2e-027
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +1 / -3
Query: 268 MTSLATTVLPEPDVRRTEKG 327
MT LAT VLPEP+VRRT++G
Sbjct: 639 MTPLATRVLPEPEVRRTDRG 580
Score = 38.2 bits (77), Expect(4) = 4e-035
Identities = 16/31 (51%), Positives = 22/31 (70%)
Frame = -2 / +2
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVI 267
++ + + P SVRLTSGSG+T+VAS VI
Sbjct: 548 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVI 640
Score = 27.2 bits (53), Expect(4) = 4e-035
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGAT 336
M++SWG VWR S +
Sbjct: 518 MERSWGAVWRYQSSGS 565
>gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_B04_A002 3', mRNA sequence
Length = 681
Score = 90.0 bits (190), Expect(2) = 4e-035
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -2 / +1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 70 GAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 249
Query: 440 RSVELMQ 420
V++M+
Sbjct: 250 VQVDIME 270
Score = 79.4 bits (167), Expect(2) = 4e-035
Identities = 28/55 (50%), Positives = 40/55 (72%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR VVA+ VIPA W P YRS++ +
Sbjct: 295 MRESWGSIWRLDANHRLQAPFSLRITNESGRKVVANRVIPANWAPNNYYRSIIQY 459
>gb|CW396909.1|CW396909 fsbb001f085j02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f085j02, DNA
sequence
Length = 598
Score = 122 bits (262), Expect(5) = 9e-035
Identities = 49/58 (84%), Positives = 54/58 (93%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN* 210
MQ+SWG VWR NSGA LQ PFSVRLTSGSGRTVVA++VIPAGW+PGATYRSVVNF+N*
Sbjct: 56 MQRSWGAVWRYNSGAALQAPFSVRLTSGSGRTVVATNVIPAGWSPGATYRSVVNFNN* 229
Score = 119 bits (255), Expect(5) = 7e-033
Identities = 49/58 (84%), Positives = 51/58 (87%)
Frame = +1 / -2
Query: 211 *LLKLTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
*LLKLTTERYVAPG HPAGMT +ATTVLPEP+VRRTEKG CR APEL LHT PHD CI
Sbjct: 228 *LLKLTTERYVAPGDHPAGMTLVATTVLPEPEVRRTEKGACRAAPELYLHTAPHDRCI 55
Score = 26.7 bits (52), Expect(5) = 7e-033
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 420 LHELHGPELA 449
LHELHGP+LA
Sbjct: 31 LHELHGPQLA 2
Score = 24.9 bits (48), Expect(5) = 9e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / +3
Query: 91 PYRRLVCTVACVT 53
P L+CTVACVT
Sbjct: 345 PTTTLLCTVACVT 383
Score = 24.9 bits (48), Expect(5) = 9e-035
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1 / +1
Query: 129 WLGL*FELCVCLY 91
WLGL*FEL V Y
Sbjct: 301 WLGL*FELAVRAY 339
Score = 24.4 bits (47), Expect(5) = 9e-035
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -2 / +2
Query: 449 GELRSVELMQ 420
GELRSVELMQ
Sbjct: 2 GELRSVELMQ 31
Score = 24.0 bits (46), Expect(5) = 7e-033
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2 / -3
Query: 101 THSSNHKPSQ 130
T SSNHKPSQ
Sbjct: 329 TASSNHKPSQ 300
Score = 23.5 bits (45), Expect(5) = 9e-035
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +2
Query: 27 RVSPEWRV 4
RVSPEWRV
Sbjct: 389 RVSPEWRV 412
Score = 22.1 bits (42), Expect(5) = 7e-033
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2 / -3
Query: 53 CHARNSTH* 79
CHARNST *
Sbjct: 383 CHARNSTQ* 357
Score = 21.7 bits (41), Expect(5) = 7e-033
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2 / -2
Query: 2 RTRHSGETR 28
+TRHSG+TR
Sbjct: 414 QTRHSGDTR 388
>gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_B11_A002 3', mRNA sequence
Length = 779
Score = 80.3 bits (169), Expect(3) = 9e-035
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = -2 / +3
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
+ N+G L+ PFS+RLTS SG+ +VA++VIPAGW PGATYRS+VN+S
Sbjct: 204 YNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS 347
Score = 79.0 bits (166), Expect(3) = 9e-035
Identities = 30/49 (61%), Positives = 41/49 (83%)
Frame = -2 / +3
Query: 566 RIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
+IQY RVPC ++G++IAF+VD GSN YL VLVE+E GDG+L +V+LM+
Sbjct: 3 KIQYKRVPCKYSGVNIAFRVDQGSNPFYLEVLVEFEDGDGDLSAVDLME 149
Score = 67.0 bits (140), Expect(2) = 2e-023
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1 / -2
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXL 357
LT ERYVAPG PAGMT LAT+ LPE +VRR+EKG P L L
Sbjct: 340 LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL 206
Score = 62.9 bits (131), Expect(2) = 2e-023
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +3 / -1
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLD 563
GLH++HG E+AVA L L QH QV V A VH E DVH ARHP VLD
Sbjct: 152 GLHQVHGAEVAVAVLELHQHLQVEWVGALVHPEGDVHAAVLARHPLVLD 6
Score = 26.7 bits (52), Expect(3) = 9e-035
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNS 345
M Q+WG +WR NS
Sbjct: 174 MVQNWGALWRYNS 212
>gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 3', mRNA sequence
Length = 775
Score = 90.0 bits (190), Expect(2) = 9e-035
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 165 GAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 344
Query: 440 RSVELMQ 420
V++M+
Sbjct: 345 VQVDIME 365
Score = 78.0 bits (164), Expect(2) = 9e-035
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 390 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 554
>gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 3', mRNA sequence
Length = 739
Score = 90.0 bits (190), Expect(2) = 9e-035
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 173 GAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 352
Query: 440 RSVELMQ 420
V++M+
Sbjct: 353 VQVDIME 373
Score = 78.0 bits (164), Expect(2) = 9e-035
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 398 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 562
>gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 3', mRNA sequence
Length = 668
Score = 90.0 bits (190), Expect(2) = 1e-034
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -2 / +1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 58 GAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 237
Query: 440 RSVELMQ 420
V++M+
Sbjct: 238 VQVDIME 258
Score = 78.0 bits (164), Expect(2) = 1e-034
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 283 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 447
>gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_A01_A002 3', mRNA sequence
Length = 620
Score = 90.0 bits (190), Expect(2) = 1e-034
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 15 GAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 194
Query: 440 RSVELMQ 420
V++M+
Sbjct: 195 VQVDIME 215
Score = 78.0 bits (164), Expect(2) = 1e-034
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 240 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 404
>gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 90.0 bits (190), Expect(2) = 1e-034
Identities = 35/67 (52%), Positives = 50/67 (74%)
Frame = -2 / +1
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 34 GAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 213
Query: 440 RSVELMQ 420
V++M+
Sbjct: 214 VQVDIME 234
Score = 78.0 bits (164), Expect(2) = 1e-034
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 259 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 423
>gb|BE361244.1|BE361244 DG1_70_C10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 84.0 bits (177), Expect(2) = 1e-034
Identities = 30/55 (54%), Positives = 39/55 (70%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M +WG WR N+G L+ PF +RLTS SGR +VA++ IPA W PG YRS+VN+
Sbjct: 205 MAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNY 369
Score = 83.5 bits (176), Expect(2) = 8e-026
Identities = 38/60 (63%), Positives = 44/60 (73%)
Frame = +3 / -1
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDPEASGAAELVG 596
GLH++ G E+AV L LDQH +V RVRA VHLERDVH ARHP V DPE + +AELVG
Sbjct: 183 GLHQVDGLEVAVVVLELDQHVEVERVRALVHLERDVHAGVLARHPPVQDPEHAASAELVG 4
Score = 83.5 bits (176), Expect(2) = 1e-034
Identities = 32/59 (54%), Positives = 46/59 (77%)
Frame = -2 / +1
Query: 596 ADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
AD+LR+ G LRI Y RVPC + G+++AFKVD G+N Y VL+E+E DG+L++V+LM+
Sbjct: 4 ADKLRAGGVLRILYRRVPCKYPGVNVAFKVDQGANPFYFDVLIEFEDDDGDLKAVDLME 180
Score = 54.7 bits (113), Expect(2) = 8e-026
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = +1 / -2
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
LT ER PG H AGM LAT+ LPE +V R+ G + P L H P C +
Sbjct: 365 LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAM 204
>gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 5', mRNA sequence
Length = 816
Score = 94.5 bits (200), Expect(2) = 2e-034
Identities = 37/67 (55%), Positives = 51/67 (76%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG++D+LR AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 456 GAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 635
Query: 440 RSVELMQ 420
V+LM+
Sbjct: 636 VQVDLME 656
Score = 72.1 bits (151), Expect(2) = 2e-034
Identities = 25/45 (55%), Positives = 35/45 (77%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTP 249
M++SWG +WR +SG L PFS+R+T+ SG+T+VA+ VIPA W P
Sbjct: 681 MRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVP 815
>gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 3', mRNA sequence
Length = 776
Score = 88.1 bits (186), Expect(2) = 3e-034
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++ R AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 165 GAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 344
Query: 440 RSVELMQ 420
V++M+
Sbjct: 345 VQVDIME 365
Score = 78.0 bits (164), Expect(2) = 3e-034
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 390 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 554
>gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 3', mRNA sequence
Length = 755
Score = 88.1 bits (186), Expect(2) = 3e-034
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++ R AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 149 GAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 328
Query: 440 RSVELMQ 420
V++M+
Sbjct: 329 VQVDIME 349
Score = 78.0 bits (164), Expect(2) = 3e-034
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 374 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 538
>gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_G04_A002 3', mRNA sequence
Length = 695
Score = 88.1 bits (186), Expect(2) = 3e-034
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -2 / +3
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++ R AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 87 GAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 266
Query: 440 RSVELMQ 420
V++M+
Sbjct: 267 VQVDIME 287
Score = 78.0 bits (164), Expect(2) = 3e-034
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 312 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 476
>gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 3', mRNA sequence
Length = 680
Score = 88.1 bits (186), Expect(2) = 3e-034
Identities = 34/67 (50%), Positives = 49/67 (73%)
Frame = -2 / +2
Query: 620 GAMAKPGQADQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGEL 441
GAMAKPG+ ++ R AG + IQ+ RVPC++ G + F V+ GSN Y AVLVE+E GDG++
Sbjct: 83 GAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDGDV 262
Query: 440 RSVELMQ 420
V++M+
Sbjct: 263 VQVDIME 283
Score = 78.0 bits (164), Expect(2) = 3e-034
Identities = 27/55 (49%), Positives = 40/55 (72%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M++SWG +WR ++ LQ PFS+R+T+ SGR +VA+ VIPA W P YRS++ +
Sbjct: 308 MRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRSIIQY 472
>gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_C04_A002 3', mRNA sequence
Length = 657
Score = 80.3 bits (169), Expect(3) = 4e-034
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = -2 / +1
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
+ N+G L+ PFS+RLTS SG+ +VA++VIPAGW PGATYRS+VN+S
Sbjct: 202 YNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS 345
Score = 76.7 bits (161), Expect(3) = 4e-034
Identities = 28/49 (57%), Positives = 40/49 (81%)
Frame = -2 / +1
Query: 566 RIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
++QY RVPC ++G++IAF+VD GSN Y VLVE+E GDG+L +V+LM+
Sbjct: 1 KVQYKRVPCKYSGVNIAFRVDQGSNPFYFEVLVEFEDGDGDLSAVDLME 147
Score = 65.2 bits (136), Expect(2) = 2e-022
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +1 / -2
Query: 226 TTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXL 357
T ERYVAPG PAGMT LAT+ LPE +VRR+EKG P L L
Sbjct: 335 TRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL 204
Score = 61.6 bits (128), Expect(2) = 2e-022
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3 / -1
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLD 563
GLH++HG E+AVA L L QH +V V A VH E DVH ARHP VLD
Sbjct: 150 GLHQVHGAEVAVAVLELHQHLEVEWVGALVHPEGDVHAAVLARHPLVLD 4
Score = 26.7 bits (52), Expect(3) = 4e-034
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +1
Query: 383 MQQSWGXVWRXNS 345
M Q+WG +WR NS
Sbjct: 172 MVQNWGALWRYNS 210
>gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_D10_A002 3', mRNA sequence
Length = 669
Score = 80.3 bits (169), Expect(3) = 8e-034
Identities = 30/48 (62%), Positives = 40/48 (83%)
Frame = -2 / +3
Query: 359 WRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFS 216
+ N+G L+ PFS+RLTS SG+ +VA++VIPAGW PGATYRS+VN+S
Sbjct: 201 YNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS 344
Score = 75.8 bits (159), Expect(3) = 8e-034
Identities = 28/48 (58%), Positives = 39/48 (81%)
Frame = -2 / +3
Query: 563 IQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
+QY RVPC ++G++IAF+VD GSN Y VLVE+E GDG+L +V+LM+
Sbjct: 3 VQYKRVPCKYSGVNIAFRVDQGSNPFYFEVLVEFEDGDGDLSAVDLME 146
Score = 65.2 bits (136), Expect(2) = 2e-022
Identities = 28/44 (63%), Positives = 31/44 (70%)
Frame = +1 / -3
Query: 226 TTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXL 357
T ERYVAPG PAGMT LAT+ LPE +VRR+EKG P L L
Sbjct: 334 TRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL 203
Score = 61.6 bits (128), Expect(2) = 2e-022
Identities = 29/49 (59%), Positives = 33/49 (67%)
Frame = +3 / -2
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLD 563
GLH++HG E+AVA L L QH +V V A VH E DVH ARHP VLD
Sbjct: 149 GLHQVHGAEVAVAVLELHQHLEVEWVGALVHPEGDVHAAVLARHPLVLD 3
Score = 26.7 bits (52), Expect(3) = 8e-034
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2 / +3
Query: 383 MQQSWGXVWRXNS 345
M Q+WG +WR NS
Sbjct: 171 MVQNWGALWRYNS 209
>gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id04d05 5', DNA sequence
Length = 783
Score = 82.6 bits (174), Expect(2) = 1e-033
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNFSN*RW 204
M++SWG +WR ++ LQGPFS+R+T+ SG+T+VA VIPA W P Y S+V F *R
Sbjct: 227 MRESWGSIWRMDTRRPLQGPFSLRVTNESGKTLVADQVIPADWQPDNVYSSIVQFD**RR 406
Query: 203 RNNRTGVDARAPARR 159
R A PA R
Sbjct: 407 RPRIIRPLAGRPAGR 451
Score = 81.7 bits (172), Expect(2) = 1e-033
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = -2 / +2
Query: 593 DQLRSAGRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
D+LR AG + IQ+ RVPC + G+ + F ++ GSN NYLAVLVEY +GDG++ V+LM+
Sbjct: 11 DELRHAGIIDIQFKRVPCQYPGLTVTFHIERGSNPNYLAVLVEYGNGDGDVVQVDLME 184
>gb|CD210102.1|CD210102 HS1_57_F11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_57_F11_A012 3', mRNA sequence
Length = 692
Score = 90.4 bits (191), Expect(2) = 1e-033
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = -2 / +2
Query: 383 MQQSWGXVWRXNSGATLQGPFSVRLTSGSGRTVVASDVIPAGWTPGATYRSVVNF 219
M +WG WR N+G L+ PF +RLTS SGR +VAS+ IPA WTPG TYRS+VN+
Sbjct: 185 MAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNY 349
Score = 73.9 bits (155), Expect(2) = 1e-033
Identities = 27/52 (51%), Positives = 40/52 (76%)
Frame = -2 / +2
Query: 575 GRLRIQYXRVPCSWNGMDIAFKVDAGSNANYLAVLVEYESGDGELRSVELMQ 420
G +R+QY RVPC + G+++AFKVD G+N Y VL+E+E DG+L +V+LM+
Sbjct: 5 GVVRVQYRRVPCKYPGVNVAFKVDQGANPFYFNVLIEFEDDDGDLSAVDLME 160
Score = 66.6 bits (139), Expect(2) = 5e-022
Identities = 30/50 (60%), Positives = 35/50 (70%)
Frame = +3 / -2
Query: 417 GLHELHGPELAVAGLVLDQHRQVVRVRAGVHLERDVHPVPAARHPGVLDP 566
GLH++ G E+AV L LD+H +V RV A VHLE DVH ARHP VLDP
Sbjct: 163 GLHQVDGAEVAVVVLELDEHVEVERVGALVHLEGDVHAGVLARHPPVLDP 14
Score = 58.8 bits (122), Expect(2) = 5e-022
Identities = 26/54 (48%), Positives = 31/54 (57%)
Frame = +1 / -3
Query: 223 LTTERYVAPGVHPAGMTSLATTVLPEPDVRRTEKGPCRVAPELXLHTXPHDCCI 384
LT ER V PGVH AGM LAT+ LPE +V R+ G + P L H P C +
Sbjct: 345 LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAM 184
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 659,654,488
Number of Sequences: 832831
Number of extensions: 9158893
Number of successful extensions: 189634
Number of sequences better than 1.0e-020: 163
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 18305916489
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)