TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2647492.2.1
(1179 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW339733.1|CW339733 104_840_11485424_148_36144_024 Sorgh... 484 e-143
gb|CW156724.1|CW156724 104_559_11146842_116_36378_067 Sorgh... 436 e-130
gb|CW216666.1|CW216666 104_649_11195238_148_37123_021 Sorgh... 346 e-107
gb|CW216665.1|CW216665 104_649_11195238_116_37124_021 Sorgh... 353 e-105
gb|CW339732.1|CW339732 104_840_11485424_116_36145_024 Sorgh... 308 2e-093
gb|BG464761.1|BG464761 EM1_33_G08.g1_A002 Embryo 1 (EM1) So... 276 4e-083
gb|CW156725.1|CW156725 104_559_11146842_148_36377_067 Sorgh... 302 9e-081
gb|BG357766.1|BG357766 OV2_30_A08.b1_A002 Ovary 2 (OV2) Sor... 248 9e-072
gb|CW403680.1|CW403680 fsbb001f095i07f0 Sorghum methylation... 200 2e-065
gb|BF704870.1|BF704870 FM1_52_E09.b1_A003 Floral-Induced Me... 180 3e-060
gb|AW284695.1|AW284695 LG1_214_D03.g1_A002 Light Grown 1 (L... 137 3e-053
gb|BG241689.1|BG241689 RHIZ2_49_F04.b1_A003 Rhizome2 (RHIZ2... 205 1e-051
gb|BG465618.1|BG465618 RHIZ2_46_G02.b1_A003 Rhizome2 (RHIZ2... 205 1e-051
gb|CW274398.1|CW274398 104_747_11404406_148_35373_059 Sorgh... 147 1e-051
gb|CW484404.1|CW484404 fsbb001f246i15k0 Sorghum methylation... 138 8e-051
gb|CW243932.1|CW243932 104_704_11220317_148_37582_021 Sorgh... 138 8e-051
gb|CN126701.1|CN126701 RHOH1_18_E04.g1_A002 Acid- and alkal... 183 1e-050
gb|BG241700.1|BG241700 RHIZ2_49_G04.b1_A003 Rhizome2 (RHIZ2... 199 5e-050
gb|CW149826.1|CW149826 104_549_11142703_116_36303_032 Sorgh... 127 5e-050
gb|AW671617.1|AW671617 LG1_348_A07.b1_A002 Light Grown 1 (L... 199 7e-050
gb|BE361563.1|BE361563 DG1_72_F05.b1_A002 Dark Grown 1 (DG1... 191 2e-047
gb|BI211295.1|BI211295 IP1_59_A01.b1_A002 Immature pannicle... 191 2e-047
gb|CL178953.1|CL178953 104_387_10894956_116_31906_252 Sorgh... 147 7e-046
gb|CW135897.1|CW135897 104_520_11118089_148_34834_069 Sorgh... 113 9e-046
gb|BE361554.1|BE361554 DG1_72_E04.b1_A002 Dark Grown 1 (DG1... 181 2e-044
gb|CW041743.1|CW041743 104_275_10506722_114_30284 Sorghum m... 142 3e-044
gb|BH245640.1|BH245640 pSB1108 S. bicolor BTx623 PstI-diges... 97 1e-043
gb|BF657097.1|BF657097 OV2_18_E09.b1_A002 Ovary 2 (OV2) Sor... 168 5e-043
gb|CW116093.1|CW116093 104_491_11106924_116_34599_038 Sorgh... 116 4e-040
gb|CW244720.1|CW244720 104_705_11220757_116_37589_051 Sorgh... 92 7e-040
gb|CW135896.1|CW135896 104_520_11118089_116_34838_069 Sorgh... 147 4e-039
gb|CW431565.1|CW431565 fsbb001f145n07k0 Sorghum methylation... 89 3e-037
gb|CW244721.1|CW244721 104_705_11220757_148_37590_051 Sorgh... 92 1e-036
gb|CD210963.1|CD210963 HS1_58_F06.b1_A012 Heat-shocked seed... 94 9e-035
gb|CW266049.1|CW266049 104_735_11232219_148_35267_006 Sorgh... 149 1e-034
gb|CW149827.1|CW149827 104_549_11142703_148_36304_032 Sorgh... 147 4e-034
gb|CW171019.1|CW171019 104_581_11155520_116_36524_022 Sorgh... 147 4e-034
gb|BZ779793.1|BZ779793 ii34f05.g1 WGS-SbicolorF (DH5a methy... 133 7e-034
gb|CW243931.1|CW243931 104_704_11220317_116_37581_021 Sorgh... 130 5e-033
gb|CW488152.1|CW488152 fsbb001f254g10k0 Sorghum methylation... 78 2e-032
gb|CW116094.1|CW116094 104_491_11106924_148_34595_038 Sorgh... 105 6e-031
gb|CW407741.1|CW407741 fsbb001f101f14f0 Sorghum methylation... 87 6e-030
gb|CN126444.1|CN126444 RHOH1_17_E05.b1_A002 Acid- and alkal... 100 4e-029
gb|CW452574.1|CW452574 fsbb001f193d06k0 Sorghum methylation... 82 4e-029
gb|BG050368.1|BG050368 FM1_53_B09.g1_A003 Floral-Induced Me... 127 4e-028
gb|CL193888.1|CL193888 104_417_10941238_116_32279_081 Sorgh... 114 5e-028
gb|CW110476.1|CW110476 104_483_11103729_148_34523_043 Sorgh... 112 7e-028
gb|CW488151.1|CW488151 fsbb001f254g10f0 Sorghum methylation... 78 1e-027
gb|CW372759.1|CW372759 fsbb001f048m23k0 Sorghum methylation... 125 2e-027
gb|CN137707.1|CN137707 OX1_59_B09.b1_A002 Oxidatively-stres... 89 3e-027
gb|CG993154.1|CG993154 pSB1108 Sorghum propinquum RFLP prob... 72 7e-027
gb|CW484403.1|CW484403 fsbb001f246i15f0 Sorghum methylation... 71 4e-026
gb|CW031858.1|CW031858 104_260_10501046_115_30366 Sorghum m... 116 9e-026
gb|CW161514.1|CW161514 104_568_11150454_116_36432_023 Sorgh... 116 1e-025
gb|CL156878.1|CL156878 104_344_10783171_114_31373_115 Sorgh... 116 1e-025
gb|CL156879.1|CL156879 104_344_10783171_116_31374_115 Sorgh... 116 1e-025
gb|CW412016.1|CW412016 fsbb001f107h08f0 Sorghum methylation... 116 1e-025
gb|CW402506.1|CW402506 fsbb001f093m19k0 Sorghum methylation... 104 2e-025
gb|CW385009.1|CW385009 fsbb001f068f03f0 Sorghum methylation... 107 4e-025
gb|CW412017.1|CW412017 fsbb001f107h08k0 Sorghum methylation... 116 5e-025
gb|CD426923.1|CD426923 SA1_26_E07.b1_A002 Salicylic acid-tr... 114 3e-024
gb|CW471152.1|CW471152 fsbb001f224n21k0 Sorghum methylation... 110 4e-024
gb|CW171020.1|CW171020 104_581_11155520_148_36523_022 Sorgh... 78 4e-024
gb|CW066443.1|CW066443 104_313_10523691_115_30147 Sorghum m... 77 6e-023
gb|CW041744.1|CW041744 104_275_10506722_115_30285 Sorghum m... 87 1e-022
gb|CN130244.1|CN130244 RHOH1_40_E05.b1_A002 Acid- and alkal... 89 4e-022
gb|CW474826.1|CW474826 fsbb001f230o09k0 Sorghum methylation... 106 7e-022
gb|CW066444.1|CW066444 104_313_10523691_115_30149 Sorghum m... 77 1e-021
gb|CW101289.1|CW101289 104_469_11004563_148_34410_048 Sorgh... 78 2e-021
gb|CL178954.1|CL178954 104_387_10894956_148_31905_252 Sorgh... 78 2e-021
gb|BM326044.1|BM326044 PIC1_65_B03.b1_A002 Pathogen-infecte... 100 5e-021
>gb|CW339733.1|CW339733 104_840_11485424_148_36144_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485424, DNA
sequence
Length = 739
Score = 484 bits (1050), Expect(2) = e-143
Identities = 196/209 (93%), Positives = 205/209 (98%)
Frame = -1 / +2
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSPFAGFAVGSET 724
DSSSNICIEDCYISTGDD+IAIKSGWDEYGIAYGRPSS ITVRRITGSSPFAGFAVGSET
Sbjct: 32 DSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSPFAGFAVGSET 211
Query: 723 SGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHP 544
SGGVENVLAEHLNFF+SGFGIH+KTNTGRGGFIRN+TVSDVTLDNVRYGLRIVGDVGNHP
Sbjct: 212 SGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHP 391
Query: 543 DDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVRPWKC 364
D+ YNRSALPIVDALT+KNVQGQN++EAGLIKGI NSAFSRICLSNVK TGGAPV+PWKC
Sbjct: 392 DERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQPWKC 571
Query: 363 EAVSGGALDVQPSPCTELTSTSGTSFCTN 277
EAVSGGALDVQPSPCTELTSTSGTSFCTN
Sbjct: 572 EAVSGGALDVQPSPCTELTSTSGTSFCTN 658
Score = 423 bits (919), Expect(2) = e-118
Identities = 172/212 (81%), Positives = 176/212 (83%)
Frame = -3 / +1
Query: 904 RFQQQHLHRGLLHFDW*RFHRHQEWLG*VWNRLWPPQFWNHRAADHRLLPVCWLRGRKRD 725
RFQQQHLH GLLHFD *R H HQEWLG*VWNRLWPPQ +HR DHRLLP C LR KR+
Sbjct: 31 RFQQQHLH*GLLHFDG*RCHCHQEWLG*VWNRLWPPQLRHHRPPDHRLLPFCRLRCWKRN 210
Query: 724 IRWRGERPCRTLELLQLRVWDPCQDQHRQGRLHQEHHCLGCDAG*RPVRPADRWRCRQSP 545
IRWRGERPCR ELLQLRV DP QDQHRQGRLH E HCL D G*RP+RPADR RC Q P
Sbjct: 211 IRWRGERPCRAPELLQLRVRDPHQDQHRQGRLHPERHCLRRDPG*RPLRPADRRRCWQPP 390
Query: 544 RRQLQPECAPDRRRPYGKECPGPERQGGWADQGHPQLGLLPDLPVERQVHWWCACPAVEV 365
RR LQPE AP+R RP KECPGPE QGGWADQGH QLGLLPDLPVERQ HW CACPAVEV
Sbjct: 391 RRALQPERAPNR*RPDDKECPGPEHQGGWADQGHCQLGLLPDLPVERQAHWRCACPAVEV 570
Query: 364 RGCQRWRSRRAAVPVHRTDFHVWDELLYKFAL 269
RGCQRWRSRRAAV VHRTDFHV DELLYKF L
Sbjct: 571 RGCQRWRSRRAAVAVHRTDFHVRDELLYKFTL 666
Score = 380 bits (824), Expect(2) = e-107
Identities = 157/210 (74%), Positives = 171/210 (81%)
Frame = +3 / -3
Query: 276 NLYRSSSQTWKSVLCTGTAARRERHR*QPRTSTAGQAHHQXXXXXXXXXXXXPSWGCP*S 455
NLYRSSS+TWKSVLCT TAARRERHR*QPRTSTAGQAH Q PSW CP*S
Sbjct: 659 NLYRSSSRTWKSVLCTATAARRERHR*QPRTSTAGQAHLQ*A*RSTGRSGRRPSWQCP*S 480
Query: 456 AQPP*RSGPGHSLP*GRRRSGAHSGCSCRRGDCRHRQRSAGRTGRYPASHPRQ*CS**SR 635
AQPP* SGPGHSL GR+R GA SGCS RRG C+HR+RSAGR+GRYP S RQ* S *S
Sbjct: 479 AQPP*CSGPGHSLSSGRQRLGARSGCSARRGGCQHRRRSAGRSGRYPGSRRRQ*RSG*SL 300
Query: 636 PCLCWS*HGSQTLS*RSSSVLQGRSPRHLMSRFRPRSQQTGRSL*SAAR*FQNWGGHRRF 815
PC CWS* GS+TLS*RSS LQGRSPRHLM RF+ RS+Q GRSL*S R* ++WGGH+RF
Sbjct: 299 PCRCWS*CGSRTLS*RSSGALQGRSPRHLMFRFQQRSRQKGRSL*SGGR*CRSWGGHKRF 120
Query: 816 HTHPSHS*WRWNRHQSKCSNPRCRCCCWNL 905
HTHPSHS*W+W+RH SKCSNP+CRCCCWNL
Sbjct: 119 HTHPSHS*WQWHRHPSKCSNPQCRCCCWNL 30
Score = 373 bits (808), Expect = e-102
Identities = 163/210 (77%), Positives = 176/210 (83%)
Frame = +1 / -1
Query: 277 ICTEARPRRGSQFCARGRLHVESATADSLALPRPDRRTTSELDVRQADPGEGRVGDALDQ 456
ICTEARP RGSQFCAR RLHVESATADSLALPR DRRT+SELDVRQADPGEGRVG+ALDQ
Sbjct: 658 ICTEARPGRGSQFCARRRLHVESATADSLALPRLDRRTSSELDVRQADPGEGRVGNALDQ 479
Query: 457 PSLPDVLALDILYRKGVDDRERTPXXXXXXXXXXXXNDPQAVPDVIQRHIRDSDVPDEAA 636
PSL DVLALDILYR+GV+D ER P +DPQAV DVIQ H+ DSDVPDEA+
Sbjct: 478 PSLLDVLALDILYRQGVNDWERAPVVALVGVVANIADDPQAVADVIQGHVGDSDVPDEAS 299
Query: 637 PACVGLDMDPKP*VEEVQVFCKDVLHAT*CLASDREASKRGGACDPPHGDSRTGAAIGDS 816
PA VGLD+DP+P* EEVQV CKDVLHAT*C AS+ EA KRGGACDP GD GAAI DS
Sbjct: 298 PAGVGLDVDPEP*AEEVQVLCKDVLHAT*CFASNSEAGKRGGACDPADGDVGAGAAISDS 119
Query: 817 ILIPATLDGDGIVTSRNVAILDADVAAGIW 906
ILIPATLDG+GIVT RNVAIL+ADVAAGI+
Sbjct: 118 ILIPATLDGNGIVTRRNVAILNADVAAGIY 29
Score = 326 bits (706), Expect = 4e-088
Identities = 158/209 (75%), Positives = 162/209 (77%)
Frame = -2 / +3
Query: 902 IPAATSASRIATFRLVTIPSPSRVAGMSMESPMAAPVLESPCGGSQAPPRLLASRSEARH 723
IPAATSA RIATFR VT+P PSRVAGMSMES MAAP SP GSQAPP L AS EA+H
Sbjct: 33 IPAATSALRIATFRRVTMPLPSRVAGMSMESLMAAPAPTSPSAGSQAPPLLPASLLEAKH 212
Query: 722 QVAWRXXXXXXXXXXXXXXXSMSRPTQAGAASSGTSLSRM*RWITSGTACGSLAMSAITP 543
QVAWR S SRPT AG ASSGTSLS * WITS TACGS AM A TP
Sbjct: 213 QVAWRTSLQST*TSSAQGSGSTSRPTPAGEASSGTSLSPT*PWITSATACGSSAMLATTP 392
Query: 542 TTATTGVRSRSSTPLR*RMSRARTSGRLG*SRASPTRPSPGSACRTSSSLVVRLSGRGSA 363
T+ATTG RS+S TP R*RMSRARTS RLG*SRA PTRPSPGSACRTSSSL VRLS RGSA
Sbjct: 393 TSATTGARSQSLTP*R*RMSRARTSRRLG*SRALPTRPSPGSACRTSSSLEVRLSSRGSA 572
Query: 362 RLSAVALSTCSRPRAQN*LPRLGRASVQI 276
RLSAVALSTCSR RAQN*LPR GRASVQI
Sbjct: 573 RLSAVALSTCSRRRAQN*LPRPGRASVQI 659
Score = 232 bits (502), Expect(3) = e-115
Identities = 102/112 (91%), Positives = 104/112 (92%)
Frame = +2 / -2
Query: 569 IRRPYRTLSSVTSETVMFLMKPPLPVLVLTWIPNPELKKFKCSARTFSTPPDVSLPTAKP 748
IRRP RTLS VTSETV F MKPPLPVLVL WIPNPELKKF+CSARTFSTPPDVSLPTAKP
Sbjct: 366 IRRP*RTLSRVTSETVTFRMKPPLPVLVLMWIPNPELKKFRCSARTFSTPPDVSLPTAKP 187
Query: 749 ANGEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLES 904
A GEEPVIRRTV+ ELGRP*AIPYSSQPLLMAM SSPVEM*QSSMQMLLLES
Sbjct: 186 AKGEEPVIRRTVMSELGRP*AIPYSSQPLLMAMASSPVEM*QSSMQMLLLES 31
Score = 186 bits (401), Expect(3) = e-115
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2 / -2
Query: 254 *LAKHQSEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHGRTGAPPVNLTFDRQIREKA 433
*LA SEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHG TGAPPV+LTFDRQIREKA
Sbjct: 681 *LAAI*SEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHGWTGAPPVSLTFDRQIREKA 502
Query: 434 ELGMPLISPASLTFWPWTFFTVRASTI 514
EL MPLISPASL FWPWTFF VRASTI
Sbjct: 501 ELAMPLISPASLMFWPWTFFIVRASTI 421
Score = 46.9 bits (96), Expect(2) = e-143
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / +1
Query: 241 LLLCFCIYEYVYWCFKAWA 185
LLLC CIYEYV+ CFKAWA
Sbjct: 679 LLLCVCIYEYVHMCFKAWA 735
Score = 37.3 bits (75), Expect(3) = e-115
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / -2
Query: 182 GCPSFKAPVYILVDTEA 232
GCPSFK VYILVDT+A
Sbjct: 738 GCPSFKTHVYILVDTDA 688
Score = 30.9 bits (61), Expect(2) = e-107
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1 / -1
Query: 184 VPKL*STSIHTRRYR 228
+PKL*+T +HTRRYR
Sbjct: 736 LPKL*NTCVHTRRYR 692
Score = 25.4 bits (49), Expect(2) = e-118
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1 / +2
Query: 219 TSMYTGALKLGHP 181
TSMYT LKLG P
Sbjct: 701 TSMYTCVLKLGQP 739
>gb|CW156724.1|CW156724 104_559_11146842_116_36378_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146842, DNA
sequence
Length = 727
Score = 436 bits (946), Expect(2) = e-130
Identities = 177/192 (92%), Positives = 186/192 (96%)
Frame = -1 / +2
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSPFAGFAVGSET 724
DSSSNICIEDCYISTGDD+IAIKSGWDEYGIAYGRPSS ITVRRITGSSPFAGFAVGSET
Sbjct: 152 DSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSPFAGFAVGSET 331
Query: 723 SGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHP 544
SGGVENVLAEHLNFF+SGFGIH+KTNTGRGGFIRN+TVSDVTLDNVRYGLRIVGDVGNHP
Sbjct: 332 SGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHP 511
Query: 543 DDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVRPWKC 364
D+ YNRSALPIVDALT+K QGQN++EAGLIKGI NSAFSRICLSNVK TGGAPV+PWKC
Sbjct: 512 DERYNRSALPIVDALTIKKCQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQPWKC 691
Query: 363 EAVSGGALDVQP 328
EAVSGGALDVQP
Sbjct: 692 EAVSGGALDVQP 727
Score = 375 bits (814), Expect(2) = e-111
Identities = 153/192 (79%), Positives = 157/192 (81%)
Frame = -3 / +1
Query: 904 RFQQQHLHRGLLHFDW*RFHRHQEWLG*VWNRLWPPQFWNHRAADHRLLPVCWLRGRKRD 725
RFQQQHLH GLLHFD *R H HQEWLG*VWNRLWPPQ +HR DHRLLP C LR KR+
Sbjct: 151 RFQQQHLH*GLLHFDG*RCHCHQEWLG*VWNRLWPPQLRHHRPPDHRLLPFCRLRCWKRN 330
Query: 724 IRWRGERPCRTLELLQLRVWDPCQDQHRQGRLHQEHHCLGCDAG*RPVRPADRWRCRQSP 545
IRWRGERPCR ELLQLRV DP QDQHRQGRLH E HCL D G*RP+RPADR RC Q P
Sbjct: 331 IRWRGERPCRAPELLQLRVRDPHQDQHRQGRLHPERHCLRRDPG*RPLRPADRRRCWQPP 510
Query: 544 RRQLQPECAPDRRRPYGKECPGPERQGGWADQGHPQLGLLPDLPVERQVHWWCACPAVEV 365
RR LQPE AP+R RP KE GPE QGGWADQGH QLGLLPDLPVERQ HW CACPAVEV
Sbjct: 511 RRALQPERAPNR*RPDDKEMSGPEHQGGWADQGHCQLGLLPDLPVERQAHWRCACPAVEV 690
Query: 364 RGCQRWRSRRAA 329
RGCQRWRSRRAA
Sbjct: 691 RGCQRWRSRRAA 726
Score = 332 bits (719), Expect(2) = 4e-098
Identities = 139/192 (72%), Positives = 152/192 (79%)
Frame = +3 / -3
Query: 330 AARRERHR*QPRTSTAGQAHHQXXXXXXXXXXXXPSWGCP*SAQPP*RSGPGHSLP*GRR 509
AARRERHR*QPRTSTAGQAH Q PSW CP*SAQPP* SGP SL GR+
Sbjct: 725 AARRERHR*QPRTSTAGQAHLQ*A*RSTGRSGRRPSWQCP*SAQPP*CSGPDISLSSGRQ 546
Query: 510 RSGAHSGCSCRRGDCRHRQRSAGRTGRYPASHPRQ*CS**SRPCLCWS*HGSQTLS*RSS 689
R GA SGCS RRG C+HR+RSAGR+GRYP S RQ* S *S PC CWS* GS+TLS*RSS
Sbjct: 545 RLGARSGCSARRGGCQHRRRSAGRSGRYPGSRRRQ*RSG*SLPCRCWS*CGSRTLS*RSS 366
Query: 690 SVLQGRSPRHLMSRFRPRSQQTGRSL*SAAR*FQNWGGHRRFHTHPSHS*WRWNRHQSKC 869
LQGRSPRHLM RF+ RS+Q GRSL*S R* ++WGGH+RFHTHPSHS*W+W+RH SKC
Sbjct: 365 GALQGRSPRHLMFRFQQRSRQKGRSL*SGGR*CRSWGGHKRFHTHPSHS*WQWHRHPSKC 186
Query: 870 SNPRCRCCCWNL 905
SNP+CRCCCWNL
Sbjct: 185 SNPQCRCCCWNL 150
Score = 331 bits (718), Expect(2) = 9e-097
Identities = 146/193 (75%), Positives = 159/193 (82%)
Frame = +1 / -1
Query: 328 RLHVESATADSLALPRPDRRTTSELDVRQADPGEGRVGDALDQPSLPDVLALDILYRKGV 507
RLHVESATADSLALPR DRRT+SELDVRQADPGEGRVG+ALDQPSL DVLAL LYR+GV
Sbjct: 727 RLHVESATADSLALPRLDRRTSSELDVRQADPGEGRVGNALDQPSLLDVLALTFLYRQGV 548
Query: 508 DDRERTPXXXXXXXXXXXXNDPQAVPDVIQRHIRDSDVPDEAAPACVGLDMDPKP*VEEV 687
+D ER P +DPQAV DVIQ H+ DSDVPDEA+PA VGLD+DP+P* EEV
Sbjct: 547 NDWERAPVVALVGVVANIADDPQAVADVIQGHVGDSDVPDEASPAGVGLDVDPEP*AEEV 368
Query: 688 QVFCKDVLHAT*CLASDREASKRGGACDPPHGDSRTGAAIGDSILIPATLDGDGIVTSRN 867
QV CKDVLHAT*C AS+ EA KRGGACDP GD GAAI DSILIPATLDG+GIVT RN
Sbjct: 367 QVLCKDVLHAT*CFASNSEAGKRGGACDPADGDVGAGAAISDSILIPATLDGNGIVTRRN 188
Query: 868 VAILDADVAAGIW 906
VAIL+ADVAAGI+
Sbjct: 187 VAILNADVAAGIY 149
Score = 288 bits (624), Expect(2) = 3e-083
Identities = 140/191 (73%), Positives = 144/191 (75%)
Frame = -2 / +3
Query: 902 IPAATSASRIATFRLVTIPSPSRVAGMSMESPMAAPVLESPCGGSQAPPRLLASRSEARH 723
IPAATSA RIATFR VT+P PSRVAGMSMES MAAP SP GSQAPP L AS EA+H
Sbjct: 153 IPAATSALRIATFRRVTMPLPSRVAGMSMESLMAAPAPTSPSAGSQAPPLLPASLLEAKH 332
Query: 722 QVAWRXXXXXXXXXXXXXXXSMSRPTQAGAASSGTSLSRM*RWITSGTACGSLAMSAITP 543
QVAWR S SRPT AG ASSGTSLS * WITS TACGS AM A TP
Sbjct: 333 QVAWRTSLQST*TSSAQGSGSTSRPTPAGEASSGTSLSPT*PWITSATACGSSAMLATTP 512
Query: 542 TTATTGVRSRSSTPLR*RMSRARTSGRLG*SRASPTRPSPGSACRTSSSLVVRLSGRGSA 363
T+ATTG RS+S TP R*R RARTS RLG*SRA PTRPSPGSACRTSSSL VRLS RGSA
Sbjct: 513 TSATTGARSQSLTP*R*RNVRARTSRRLG*SRALPTRPSPGSACRTSSSLEVRLSSRGSA 692
Query: 362 RLSAVALSTCS 330
RLSAVALSTCS
Sbjct: 693 RLSAVALSTCS 725
Score = 232 bits (502), Expect(3) = e-103
Identities = 102/112 (91%), Positives = 104/112 (92%)
Frame = +2 / -2
Query: 569 IRRPYRTLSSVTSETVMFLMKPPLPVLVLTWIPNPELKKFKCSARTFSTPPDVSLPTAKP 748
IRRP RTLS VTSETV F MKPPLPVLVL WIPNPELKKF+CSARTFSTPPDVSLPTAKP
Sbjct: 486 IRRP*RTLSRVTSETVTFRMKPPLPVLVLMWIPNPELKKFRCSARTFSTPPDVSLPTAKP 307
Query: 749 ANGEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLES 904
A GEEPVIRRTV+ ELGRP*AIPYSSQPLLMAM SSPVEM*QSSMQMLLLES
Sbjct: 306 AKGEEPVIRRTVMSELGRP*AIPYSSQPLLMAMASSPVEM*QSSMQMLLLES 151
Score = 132 bits (283), Expect(3) = e-103
Identities = 55/62 (88%), Positives = 56/62 (90%)
Frame = +2 / -2
Query: 329 GCTSRAPPLTASHFHGRTGAPPVNLTFDRQIREKAELGMPLISPASLTFWPWTFFTVRAS 508
GCTSRAPPLTASHFHG TGAPPV+LTFDRQIREKAEL MPLISPASL FWP FF VRAS
Sbjct: 726 GCTSRAPPLTASHFHGWTGAPPVSLTFDRQIREKAELAMPLISPASLMFWP*HFFIVRAS 547
Query: 509 TI 514
TI
Sbjct: 546 TI 541
Score = 50.6 bits (104), Expect(3) = e-103
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +3 / -1
Query: 903 LDQFHPCWGSHVELG*SRF 959
LDQFHPCWGSHVELG*S F
Sbjct: 58 LDQFHPCWGSHVELG*SHF 2
Score = 50.6 bits (104), Expect(2) = e-130
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -1 / +1
Query: 960 RNVTILAPHDSPNTDGIDP 904
RNVTILAPHDSPNTDGIDP
Sbjct: 1 RNVTILAPHDSPNTDGIDP 57
Score = 48.7 bits (100), Expect(2) = 4e-098
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -2
Query: 904 WINSIRVGGVMWS*DSHVS 960
WINSIRVGGVMWS*DSH+S
Sbjct: 57 WINSIRVGGVMWS*DSHIS 1
Score = 47.3 bits (97), Expect(2) = e-111
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3 / +3
Query: 958 KRDYPSST*LPQHGWN*SRFQ 896
K DYPSST*LPQHGWN*SR++
Sbjct: 3 KCDYPSST*LPQHGWN*SRYR 65
Score = 44.6 bits (91), Expect(2) = 9e-097
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +2 / -3
Query: 905 GSIPSVLGESCGARIVTF 958
GSIPSVLGESCGARIVTF
Sbjct: 56 GSIPSVLGESCGARIVTF 3
Score = 42.3 bits (86), Expect(2) = 3e-083
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = -2 / +2
Query: 959 ET*LS*LHMTPPTRMELIQI 900
E *LS*LHMTPPTRMELIQ+
Sbjct: 2 EM*LS*LHMTPPTRMELIQV 61
>gb|CW216666.1|CW216666 104_649_11195238_148_37123_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195238, DNA
sequence
Length = 652
Score = 346 bits (750), Expect(2) = e-107
Identities = 140/150 (93%), Positives = 148/150 (98%)
Frame = -1 / +3
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSPFAGFAVGSET 724
DSSSNICIEDCYISTGDD+IAIKSGWDEYGIAYGRPSS ITVRRITGSSPFAGFAVGSET
Sbjct: 201 DSSSNICIEDCYISTGDDAIAIKSGWDEYGIAYGRPSSDITVRRITGSSPFAGFAVGSET 380
Query: 723 SGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHP 544
SGGVENVLAEHLNFF+SGFGIH+KTNTGRGGFIRN+TVSDVTLDNVRYGLRIVGDVGNHP
Sbjct: 381 SGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHP 560
Query: 543 DDSYNRSALPIVDALTVKNVQGQNVREAGL 454
D+ YNRSALPIVDALT+KNVQGQN++EAGL
Sbjct: 561 DERYNRSALPIVDALTIKNVQGQNIKEAGL 650
Score = 286 bits (620), Expect(2) = 2e-089
Identities = 117/151 (77%), Positives = 121/151 (80%)
Frame = -3 / +2
Query: 904 RFQQQHLHRGLLHFDW*RFHRHQEWLG*VWNRLWPPQFWNHRAADHRLLPVCWLRGRKRD 725
RFQQQHLH GLLHFD *R H HQEWLG*VWNRLWPPQ +HR DHRLLP C LR KR+
Sbjct: 200 RFQQQHLH*GLLHFDG*RCHCHQEWLG*VWNRLWPPQLRHHRPPDHRLLPFCRLRCWKRN 379
Query: 724 IRWRGERPCRTLELLQLRVWDPCQDQHRQGRLHQEHHCLGCDAG*RPVRPADRWRCRQSP 545
IRWRGERPCR ELLQLRV DP QDQHRQGRLH E HCL D G*RP+RPADR RC Q P
Sbjct: 380 IRWRGERPCRAPELLQLRVRDPHQDQHRQGRLHPERHCLRRDPG*RPLRPADRRRCWQPP 559
Query: 544 RRQLQPECAPDRRRPYGKECPGPERQGGWAD 452
RR LQPE AP+R RP KECPGPE QGGWAD
Sbjct: 560 RRALQPERAPNR*RPDDKECPGPEHQGGWAD 652
Score = 283 bits (612), Expect(2) = 2e-089
Identities = 114/151 (75%), Positives = 127/151 (84%)
Frame = +3 / -2
Query: 453 SAQPP*RSGPGHSLP*GRRRSGAHSGCSCRRGDCRHRQRSAGRTGRYPASHPRQ*CS**S 632
SAQPP* SGPGHSL GR+R GA SGCS RRG C+HR+RSAGR+GRYP S RQ* S *S
Sbjct: 651 SAQPP*CSGPGHSLSSGRQRLGARSGCSARRGGCQHRRRSAGRSGRYPGSRRRQ*RSG*S 472
Query: 633 RPCLCWS*HGSQTLS*RSSSVLQGRSPRHLMSRFRPRSQQTGRSL*SAAR*FQNWGGHRR 812
PC CWS* GS+TLS*RSS LQGRSPRHLM RF+ RS+Q GRSL*S R* ++WGGH+R
Sbjct: 471 LPCRCWS*CGSRTLS*RSSGALQGRSPRHLMFRFQQRSRQKGRSL*SGGR*CRSWGGHKR 292
Query: 813 FHTHPSHS*WRWNRHQSKCSNPRCRCCCWNL 905
FHTHPSHS*W+W+RH SKCSNP+CRCCCWNL
Sbjct: 291 FHTHPSHS*WQWHRHPSKCSNPQCRCCCWNL 199
Score = 248 bits (536), Expect(2) = 2e-075
Identities = 109/151 (72%), Positives = 120/151 (79%)
Frame = +1 / -3
Query: 454 QPSLPDVLALDILYRKGVDDRERTPXXXXXXXXXXXXNDPQAVPDVIQRHIRDSDVPDEA 633
QPSL DVLALDILYR+GV+D ER P +DPQAV DVIQ H+ DSDVPDEA
Sbjct: 650 QPSLLDVLALDILYRQGVNDWERAPVVALVGVVANIADDPQAVADVIQGHVGDSDVPDEA 471
Query: 634 APACVGLDMDPKP*VEEVQVFCKDVLHAT*CLASDREASKRGGACDPPHGDSRTGAAIGD 813
+PA VGLD+DP+P* EEVQV CKDVLHAT*C AS+ EA KRGGACDP GD GAAI D
Sbjct: 470 SPAGVGLDVDPEP*AEEVQVLCKDVLHAT*CFASNSEAGKRGGACDPADGDVGAGAAISD 291
Query: 814 SILIPATLDGDGIVTSRNVAILDADVAAGIW 906
SILIPATLDG+GIVT RNVAIL+ADVAAGI+
Sbjct: 290 SILIPATLDGNGIVTRRNVAILNADVAAGIY 198
Score = 232 bits (502), Expect(3) = 5e-082
Identities = 102/112 (91%), Positives = 104/112 (92%)
Frame = +2 / -1
Query: 569 IRRPYRTLSSVTSETVMFLMKPPLPVLVLTWIPNPELKKFKCSARTFSTPPDVSLPTAKP 748
IRRP RTLS VTSETV F MKPPLPVLVL WIPNPELKKF+CSARTFSTPPDVSLPTAKP
Sbjct: 535 IRRP*RTLSRVTSETVTFRMKPPLPVLVLMWIPNPELKKFRCSARTFSTPPDVSLPTAKP 356
Query: 749 ANGEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLES 904
A GEEPVIRRTV+ ELGRP*AIPYSSQPLLMAM SSPVEM*QSSMQMLLLES
Sbjct: 355 AKGEEPVIRRTVMSELGRP*AIPYSSQPLLMAMASSPVEM*QSSMQMLLLES 200
Score = 212 bits (457), Expect(2) = 3e-063
Identities = 104/150 (69%), Positives = 108/150 (72%)
Frame = -2 / +1
Query: 902 IPAATSASRIATFRLVTIPSPSRVAGMSMESPMAAPVLESPCGGSQAPPRLLASRSEARH 723
IPAATSA RIATFR VT+P PSRVAGMSMES MAAP SP GSQAPP L AS EA+H
Sbjct: 202 IPAATSALRIATFRRVTMPLPSRVAGMSMESLMAAPAPTSPSAGSQAPPLLPASLLEAKH 381
Query: 722 QVAWRXXXXXXXXXXXXXXXSMSRPTQAGAASSGTSLSRM*RWITSGTACGSLAMSAITP 543
QVAWR S SRPT AG ASSGTSLS * WITS TACGS AM A TP
Sbjct: 382 QVAWRTSLQST*TSSAQGSGSTSRPTPAGEASSGTSLSPT*PWITSATACGSSAMLATTP 561
Query: 542 TTATTGVRSRSSTPLR*RMSRARTSGRLG* 453
T+ATTG RS+S TP R*RMSRARTS RLG*
Sbjct: 562 TSATTGARSQSLTP*R*RMSRARTSRRLG* 651
Score = 68.4 bits (143), Expect(2) = 2e-089
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3 / -3
Query: 903 LDQFHPCWGSHVELG*SRF*SQHCCNKQ 986
LDQFHPCWGSHVELG*S F*SQHCC ++
Sbjct: 107 LDQFHPCWGSHVELG*SHF*SQHCCTQE 24
Score = 65.7 bits (137), Expect(2) = e-107
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -3 / +1
Query: 979 LQQCCDQKRDYPSST*LPQHGWN*SRFQ 896
+QQCCDQK DYPSST*LPQHGWN*SR++
Sbjct: 31 VQQCCDQKCDYPSST*LPQHGWN*SRYR 114
Score = 64.8 bits (135), Expect(2) = 2e-089
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1 / +2
Query: 978 CSNVVIRNVTILAPHDSPNTDGIDP 904
CSNVVIRNVTILAPHDSPNTDGIDP
Sbjct: 32 CSNVVIRNVTILAPHDSPNTDGIDP 106
Score = 63.4 bits (132), Expect(3) = 5e-082
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1 / -1
Query: 904 WINSIRVGGVMWS*DSHVSDHNIAA 978
WINSIRVGGVMWS*DSH+SDHNIAA
Sbjct: 106 WINSIRVGGVMWS*DSHISDHNIAA 32
Score = 56.5 bits (117), Expect(2) = 2e-075
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +2 / -2
Query: 905 GSIPSVLGESCGARIVTFLITTLL 976
GSIPSVLGESCGARIVTFLITTLL
Sbjct: 105 GSIPSVLGESCGARIVTFLITTLL 34
Score = 52.4 bits (108), Expect(2) = 3e-063
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = -2 / +3
Query: 977 AAML*SET*LS*LHMTPPTRMELIQI 900
AAML*SE *LS*LHMTPPTRMELIQ+
Sbjct: 33 AAML*SEM*LS*LHMTPPTRMELIQV 110
Score = 50.1 bits (103), Expect(3) = 5e-082
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = +2 / -1
Query: 452 ISPASLTFWPWTFFTVRASTI 514
ISPASL FWPWTFF VRASTI
Sbjct: 652 ISPASLMFWPWTFFIVRASTI 590
>gb|CW216665.1|CW216665 104_649_11195238_116_37124_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195238, DNA
sequence
Length = 599
Score = 353 bits (765), Expect(3) = e-105
Identities = 142/153 (92%), Positives = 150/153 (98%)
Frame = -1 / -1
Query: 735 GSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDV 556
GSETSGGVENVLAEHLNFF+SGFGIH+KTNTGRGGFIRN+TVSDVTLDNVRYGLRIVGDV
Sbjct: 587 GSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDV 408
Query: 555 GNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVR 376
GNHPD+ YNRSALPIVDALT+KNVQGQN++EAGLIKGI NSAFSRICLSNVK TGGAPV+
Sbjct: 407 GNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQ 228
Query: 375 PWKCEAVSGGALDVQPSPCTELTSTSGTSFCTN 277
PWKCEAVSGGALDVQPSPCTELTSTSGTSFCTN
Sbjct: 227 PWKCEAVSGGALDVQPSPCTELTSTSGTSFCTN 129
Score = 316 bits (685), Expect(2) = 1e-086
Identities = 128/155 (82%), Positives = 131/155 (84%)
Frame = -3 / -3
Query: 733 KRDIRWRGERPCRTLELLQLRVWDPCQDQHRQGRLHQEHHCLGCDAG*RPVRPADRWRCR 554
KR+IRWRGERPCR ELLQLRV DP QDQHRQGRLH E HCL D G*RP+RPADR RC
Sbjct: 585 KRNIRWRGERPCRAPELLQLRVRDPHQDQHRQGRLHPERHCLRRDPG*RPLRPADRRRCW 406
Query: 553 QSPRRQLQPECAPDRRRPYGKECPGPERQGGWADQGHPQLGLLPDLPVERQVHWWCACPA 374
Q PRR LQPE AP+R RP KECPGPE QGGWADQGH QLGLLPDLPVERQ HW CACPA
Sbjct: 405 QPPRRALQPERAPNR*RPDDKECPGPEHQGGWADQGHCQLGLLPDLPVERQAHWRCACPA 226
Query: 373 VEVRGCQRWRSRRAAVPVHRTDFHVWDELLYKFAL 269
VEVRGCQRWRSRRAAV VHRTDFHV DELLYKF L
Sbjct: 225 VEVRGCQRWRSRRAAVAVHRTDFHVRDELLYKFTL 121
Score = 274 bits (592), Expect(2) = 2e-075
Identities = 119/153 (77%), Positives = 128/153 (83%)
Frame = +1 / +3
Query: 277 ICTEARPRRGSQFCARGRLHVESATADSLALPRPDRRTTSELDVRQADPGEGRVGDALDQ 456
ICTEARP RGSQFCAR RLHVESATADSLALPR DRRT+SELDVRQADPGEGRVG+ALDQ
Sbjct: 129 ICTEARPGRGSQFCARRRLHVESATADSLALPRLDRRTSSELDVRQADPGEGRVGNALDQ 308
Query: 457 PSLPDVLALDILYRKGVDDRERTPXXXXXXXXXXXXNDPQAVPDVIQRHIRDSDVPDEAA 636
PSL DVLALDILYR+GV+D ER P +DPQAV DVIQ H+ DSDVPDEA+
Sbjct: 309 PSLLDVLALDILYRQGVNDWERAPVVALVGVVANIADDPQAVADVIQGHVGDSDVPDEAS 488
Query: 637 PACVGLDMDPKP*VEEVQVFCKDVLHAT*CLAS 735
PA VGLD+DP+P* EEVQV CKDVLHAT*C AS
Sbjct: 489 PAGVGLDVDPEP*AEEVQVLCKDVLHAT*CFAS 587
Score = 258 bits (557), Expect = 2e-067
Identities = 114/153 (74%), Positives = 120/153 (78%)
Frame = +3 / +2
Query: 276 NLYRSSSQTWKSVLCTGTAARRERHR*QPRTSTAGQAHHQXXXXXXXXXXXXPSWGCP*S 455
NLYRSSS+TWKSVLCT TAARRERHR*QPRTSTAGQAH Q PSW CP*S
Sbjct: 128 NLYRSSSRTWKSVLCTATAARRERHR*QPRTSTAGQAHLQ*A*RSTGRSGRRPSWQCP*S 307
Query: 456 AQPP*RSGPGHSLP*GRRRSGAHSGCSCRRGDCRHRQRSAGRTGRYPASHPRQ*CS**SR 635
AQPP* SGPGHSL GR+R GA SGCS RRG C+HR+RSAGR+GRYP S RQ* S *S
Sbjct: 308 AQPP*CSGPGHSLSSGRQRLGARSGCSARRGGCQHRRRSAGRSGRYPGSRRRQ*RSG*SL 487
Query: 636 PCLCWS*HGSQTLS*RSSSVLQGRSPRHLMSRF 734
PC CWS* GS+TLS*RSS LQGRSPRHLM RF
Sbjct: 488 PCRCWS*CGSRTLS*RSSGALQGRSPRHLMFRF 586
Score = 242 bits (522), Expect(2) = 3e-063
Identities = 116/153 (75%), Positives = 119/153 (77%)
Frame = -2 / -2
Query: 734 EARHQVAWRXXXXXXXXXXXXXXXSMSRPTQAGAASSGTSLSRM*RWITSGTACGSLAMS 555
EA+HQVAWR S SRPT AG ASSGTSLS * WITS TACGS AM
Sbjct: 586 EAKHQVAWRTSLQST*TSSAQGSGSTSRPTPAGEASSGTSLSPT*PWITSATACGSSAML 407
Query: 554 AITPTTATTGVRSRSSTPLR*RMSRARTSGRLG*SRASPTRPSPGSACRTSSSLVVRLSG 375
A TPT+ATTG RS+S TP R*RMSRARTS RLG*SRA PTRPSPGSACRTSSSL VRLS
Sbjct: 406 ATTPTSATTGARSQSLTP*R*RMSRARTSRRLG*SRALPTRPSPGSACRTSSSLEVRLSS 227
Query: 374 RGSARLSAVALSTCSRPRAQN*LPRLGRASVQI 276
RGSARLSAVALSTCSR RAQN*LPR GRASVQI
Sbjct: 226 RGSARLSAVALSTCSRRRAQN*LPRPGRASVQI 128
Score = 186 bits (401), Expect(3) = 5e-082
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2 / +1
Query: 254 *LAKHQSEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHGRTGAPPVNLTFDRQIREKA 433
*LA SEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHG TGAPPV+LTFDRQIREKA
Sbjct: 106 *LAAI*SEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHGWTGAPPVSLTFDRQIREKA 285
Query: 434 ELGMPLISPASLTFWPWTFFTVRASTI 514
EL MPLISPASL FWPWTFF VRASTI
Sbjct: 286 ELAMPLISPASLMFWPWTFFIVRASTI 366
Score = 120 bits (257), Expect(3) = 5e-082
Identities = 50/56 (89%), Positives = 51/56 (91%)
Frame = +2 / +1
Query: 569 IRRPYRTLSSVTSETVMFLMKPPLPVLVLTWIPNPELKKFKCSARTFSTPPDVSLP 736
IRRP RTLS VTSETV F MKPPLPVLVL WIPNPELKKF+CSARTFSTPPDVSLP
Sbjct: 421 IRRP*RTLSRVTSETVTFRMKPPLPVLVLMWIPNPELKKFRCSARTFSTPPDVSLP 588
Score = 46.9 bits (96), Expect(3) = e-105
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -3
Query: 241 LLLCFCIYEYVYWCFKAWA 185
LLLC CIYEYV+ CFKAWA
Sbjct: 108 LLLCVCIYEYVHMCFKAWA 52
Score = 39.1 bits (79), Expect(3) = 5e-082
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2 / +1
Query: 179 LGCPSFKAPVYILVDTEA 232
LGCPSFK VYILVDT+A
Sbjct: 46 LGCPSFKTHVYILVDTDA 99
Score = 30.9 bits (61), Expect(2) = 2e-075
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1 / +3
Query: 184 VPKL*STSIHTRRYR 228
+PKL*+T +HTRRYR
Sbjct: 51 LPKL*NTCVHTRRYR 95
Score = 25.8 bits (50), Expect(2) = 1e-086
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -1
Query: 219 TSMYTGALKLGHPS 178
TSMYT LKLG P+
Sbjct: 86 TSMYTCVLKLGQPN 45
Score = 22.6 bits (43), Expect(2) = 3e-063
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2 / -2
Query: 218 RVCILVL*SLGTQVFIFPK 162
RVC V *SLG PK
Sbjct: 85 RVCTHVF*SLGNPTIYLPK 29
Score = 22.1 bits (42), Expect(3) = e-105
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -1 / -2
Query: 192 LGHPSIYLPE 163
LG+P+IYLP+
Sbjct: 58 LGNPTIYLPK 29
>gb|CW339732.1|CW339732 104_840_11485424_116_36145_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11485424, DNA
sequence
Length = 651
Score = 308 bits (667), Expect(4) = 2e-093
Identities = 123/134 (91%), Positives = 131/134 (97%)
Frame = -1 / -3
Query: 678 NSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHPDDSYNRSALPIVDAL 499
+SGFGIH+KTNTGRGGFIRN+TVSDVTLDNVRYGLRIVGDVGNHPD+ YNRSALPIVDAL
Sbjct: 649 SSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHPDERYNRSALPIVDAL 470
Query: 498 TVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVRPWKCEAVSGGALDVQPSPC 319
T+KNVQGQN++EAGLIKGI NSAFSRICLSNVK TGGAPV+PWKCEAVSGGALDVQPSPC
Sbjct: 469 TIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQPWKCEAVSGGALDVQPSPC 290
Query: 318 TELTSTSGTSFCTN 277
TELTSTSGTSFCTN
Sbjct: 289 TELTSTSGTSFCTN 248
Score = 278 bits (602), Expect(2) = 3e-075
Identities = 113/137 (82%), Positives = 115/137 (83%)
Frame = -3 / -2
Query: 679 QLRVWDPCQDQHRQGRLHQEHHCLGCDAG*RPVRPADRWRCRQSPRRQLQPECAPDRRRP 500
QLRV DP QDQHRQGRLH E HCL D G*RP+RPADR RC Q PRR LQPE AP+R RP
Sbjct: 650 QLRVRDPHQDQHRQGRLHPERHCLRRDPG*RPLRPADRRRCWQPPRRALQPERAPNR*RP 471
Query: 499 YGKECPGPERQGGWADQGHPQLGLLPDLPVERQVHWWCACPAVEVRGCQRWRSRRAAVPV 320
KECPGPE QGGWADQGH QLGLLPDLPVERQ HW CACPAVEVRGCQRWRSRRAAV V
Sbjct: 470 DDKECPGPEHQGGWADQGHCQLGLLPDLPVERQAHWRCACPAVEVRGCQRWRSRRAAVAV 291
Query: 319 HRTDFHVWDELLYKFAL 269
HRTDFHV DELLYKF L
Sbjct: 290 HRTDFHVRDELLYKFTL 240
Score = 234 bits (506), Expect(2) = 1e-063
Identities = 102/133 (76%), Positives = 111/133 (83%)
Frame = +1 / +2
Query: 277 ICTEARPRRGSQFCARGRLHVESATADSLALPRPDRRTTSELDVRQADPGEGRVGDALDQ 456
ICTEARP RGSQFCAR RLHVESATADSLALPR DRRT+SELDVRQADPGEGRVG+ALDQ
Sbjct: 248 ICTEARPGRGSQFCARRRLHVESATADSLALPRLDRRTSSELDVRQADPGEGRVGNALDQ 427
Query: 457 PSLPDVLALDILYRKGVDDRERTPXXXXXXXXXXXXNDPQAVPDVIQRHIRDSDVPDEAA 636
PSL DVLALDILYR+GV+D ER P +DPQAV DVIQ H+ DSDVPDEA+
Sbjct: 428 PSLLDVLALDILYRQGVNDWERAPVVALVGVVANIADDPQAVADVIQGHVGDSDVPDEAS 607
Query: 637 PACVGLDMDPKP* 675
PA VGLD+DP+P*
Sbjct: 608 PAGVGLDVDPEP* 646
Score = 224 bits (484), Expect(2) = 4e-058
Identities = 107/127 (84%), Positives = 109/127 (85%)
Frame = -2 / -1
Query: 656 SRPTQAGAASSGTSLSRM*RWITSGTACGSLAMSAITPTTATTGVRSRSSTPLR*RMSRA 477
SRPT AG ASSGTSLS * WITS TACGS AM A TPT+ATTG RS+S TP R*RMSRA
Sbjct: 627 SRPTPAGEASSGTSLSPT*PWITSATACGSSAMLATTPTSATTGARSQSLTP*R*RMSRA 448
Query: 476 RTSGRLG*SRASPTRPSPGSACRTSSSLVVRLSGRGSARLSAVALSTCSRPRAQN*LPRL 297
RTS RLG*SRA PTRPSPGSACRTSSSL VRLS RGSARLSAVALSTCSR RAQN*LPR
Sbjct: 447 RTSRRLG*SRALPTRPSPGSACRTSSSLEVRLSSRGSARLSAVALSTCSRRRAQN*LPRP 268
Query: 296 GRASVQI 276
GRASVQI
Sbjct: 267 GRASVQI 247
Score = 223 bits (482), Expect = 3e-057
Identities = 99/135 (73%), Positives = 105/135 (77%)
Frame = +3 / +1
Query: 276 NLYRSSSQTWKSVLCTGTAARRERHR*QPRTSTAGQAHHQXXXXXXXXXXXXPSWGCP*S 455
NLYRSSS+TWKSVLCT TAARRERHR*QPRTSTAGQAH Q PSW CP*S
Sbjct: 247 NLYRSSSRTWKSVLCTATAARRERHR*QPRTSTAGQAHLQ*A*RSTGRSGRRPSWQCP*S 426
Query: 456 AQPP*RSGPGHSLP*GRRRSGAHSGCSCRRGDCRHRQRSAGRTGRYPASHPRQ*CS**SR 635
AQPP* SGPGHSL GR+R GA SGCS RRG C+HR+RSAGR+GRYP S RQ* S *S
Sbjct: 427 AQPP*CSGPGHSLSSGRQRLGARSGCSARRGGCQHRRRSAGRSGRYPGSRRRQ*RSG*SL 606
Query: 636 PCLCWS*HGSQTLS* 680
PC CWS* GS+TLS*
Sbjct: 607 PCRCWS*CGSRTLS* 651
Score = 186 bits (401), Expect(4) = 6e-070
Identities = 79/87 (90%), Positives = 80/87 (91%)
Frame = +2 / +3
Query: 254 *LAKHQSEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHGRTGAPPVNLTFDRQIREKA 433
*LA SEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHG TGAPPV+LTFDRQIREKA
Sbjct: 225 *LAAI*SEFVQKLVPDVEVSSVHGDGCTSRAPPLTASHFHGWTGAPPVSLTFDRQIREKA 404
Query: 434 ELGMPLISPASLTFWPWTFFTVRASTI 514
EL MPLISPASL FWPWTFF VRASTI
Sbjct: 405 ELAMPLISPASLMFWPWTFFIVRASTI 485
Score = 75.3 bits (158), Expect(4) = 6e-070
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = +2 / +3
Query: 569 IRRPYRTLSSVTSETVMFLMKPPLPVLVLTWIPNPEL 679
IRRP RTLS VTSETV F MKPPLPVLVL WIPNPEL
Sbjct: 540 IRRP*RTLSRVTSETVTFRMKPPLPVLVLMWIPNPEL 650
Score = 46.9 bits (96), Expect(4) = 2e-093
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = -3 / -2
Query: 241 LLLCFCIYEYVYWCFKAWA 185
LLLC CIYEYV+ CFKAWA
Sbjct: 227 LLLCVCIYEYVHMCFKAWA 171
Score = 39.1 bits (79), Expect(4) = 6e-070
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2 / +3
Query: 179 LGCPSFKAPVYILVDTEA 232
LGCPSFK VYILVDT+A
Sbjct: 165 LGCPSFKTHVYILVDTDA 218
Score = 30.9 bits (61), Expect(2) = 1e-063
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 184 VPKL*STSIHTRRYR 228
+PKL*+T +HTRRYR
Sbjct: 170 LPKL*NTCVHTRRYR 214
Score = 25.8 bits (50), Expect(4) = 2e-093
Identities = 8/13 (61%), Positives = 13/13 (100%)
Frame = -2 / -2
Query: 128 YTKRIILDSYRTE 90
YTKR++LDS++T+
Sbjct: 110 YTKRMVLDSHKTK 72
Score = 25.8 bits (50), Expect(2) = 3e-075
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 219 TSMYTGALKLGHPS 178
TSMYT LKLG P+
Sbjct: 205 TSMYTCVLKLGQPN 164
Score = 23.1 bits (44), Expect(4) = 6e-070
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +1 / +1
Query: 94 VLYESRIILFV*R 132
VL+ESR ILFV*+
Sbjct: 76 VLWESRTILFV*K 114
Score = 22.6 bits (43), Expect(2) = 4e-058
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2 / -1
Query: 218 RVCILVL*SLGTQVFIFPK 162
RVC V *SLG PK
Sbjct: 204 RVCTHVF*SLGNPTIYLPK 148
Score = 22.1 bits (42), Expect(4) = 2e-093
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -1 / -1
Query: 192 LGHPSIYLPE 163
LG+P+IYLP+
Sbjct: 177 LGNPTIYLPK 148
>gb|BG464761.1|BG464761 EM1_33_G08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 467
Score = 276 bits (597), Expect(3) = 4e-083
Identities = 112/128 (87%), Positives = 120/128 (93%)
Frame = -1 / +2
Query: 756 PFAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYG 577
PF GSETSGGVENVLAEHLNFF+SGFGIH+KTNTGRGGFIRN+TVSDVTLDNVRYG
Sbjct: 17 PFCRLRCGSETSGGVENVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDNVRYG 196
Query: 576 LRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKF 397
LRIVGDVGNHPD+ YNRSALPIVDALT+KNVQGQN++EAGLIKGI NSAFSRICLSNVK
Sbjct: 197 LRIVGDVGNHPDERYNRSALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKL 376
Query: 396 TGGAPVRP 373
TGGAPV+P
Sbjct: 377 TGGAPVQP 400
Score = 243 bits (526), Expect(3) = 2e-071
Identities = 98/124 (79%), Positives = 102/124 (82%)
Frame = -3 / +1
Query: 733 KRDIRWRGERPCRTLELLQLRVWDPCQDQHRQGRLHQEHHCLGCDAG*RPVRPADRWRCR 554
KR+IRWRGERPCR ELLQLRV DP QDQHRQGRLH E HCL D G*RP+RPADR RC
Sbjct: 40 KRNIRWRGERPCRAPELLQLRVRDPHQDQHRQGRLHPERHCLRRDPG*RPLRPADRRRCW 219
Query: 553 QSPRRQLQPECAPDRRRPYGKECPGPERQGGWADQGHPQLGLLPDLPVERQVHWWCACPA 374
Q PRR LQPE AP+R RP KECPGPE QGGWADQGH QLGLLPDLPVERQ HW CACPA
Sbjct: 220 QPPRRALQPERAPNR*RPDDKECPGPEHQGGWADQGHCQLGLLPDLPVERQAHWRCACPA 399
Query: 373 VEVR 362
V+ R
Sbjct: 400 VKCR 411
Score = 206 bits (445), Expect(3) = 1e-061
Identities = 90/127 (70%), Positives = 101/127 (79%)
Frame = +1 / -2
Query: 373 RPDRRTTSELDVRQADPGEGRVGDALDQPSLPDVLALDILYRKGVDDRERTPXXXXXXXX 552
R DRRT+SELDVRQADPGEGRVG+ALDQPSL DVLALDILYR+GV+D ER P
Sbjct: 400 RLDRRTSSELDVRQADPGEGRVGNALDQPSLLDVLALDILYRQGVNDWERAPVVALVGVV 221
Query: 553 XXXXNDPQAVPDVIQRHIRDSDVPDEAAPACVGLDMDPKP*VEEVQVFCKDVLHAT*CLA 732
+DPQAV DVIQ H+ DSDVPDEA+PA VGLD+DP+P* EEVQV CKDVLHAT*C A
Sbjct: 220 ANIADDPQAVADVIQGHVGDSDVPDEASPAGVGLDVDPEP*AEEVQVLCKDVLHAT*CFA 41
Query: 733 SDREASK 753
S + +K
Sbjct: 40 STAKPAK 20
Score = 188 bits (406), Expect(2) = 1e-052
Identities = 85/129 (65%), Positives = 92/129 (71%)
Frame = +3 / -1
Query: 372 TAGQAHHQXXXXXXXXXXXXPSWGCP*SAQPP*RSGPGHSLP*GRRRSGAHSGCSCRRGD 551
TAGQAH Q PSW CP*SAQPP* SGPGHSL GR+R GA SGCS RRG
Sbjct: 401 TAGQAHLQ*A*RSTGRSGRRPSWQCP*SAQPP*CSGPGHSLSSGRQRLGARSGCSARRGG 222
Query: 552 CRHRQRSAGRTGRYPASHPRQ*CS**SRPCLCWS*HGSQTLS*RSSSVLQGRSPRHLMSR 731
C+HR+RSAGR+GRYP S RQ* S *S PC CWS* GS+TLS*RSS LQGRSPRHLM R
Sbjct: 221 CQHRRRSAGRSGRYPGSRRRQ*RSG*SLPCRCWS*CGSRTLS*RSSGALQGRSPRHLMFR 42
Query: 732 FRPRSQQTG 758
F + + G
Sbjct: 41 FHSEAGKRG 15
Score = 183 bits (394), Expect = 5e-045
Identities = 90/137 (65%), Positives = 94/137 (68%)
Frame = -2 / +3
Query: 734 EARHQVAWRXXXXXXXXXXXXXXXSMSRPTQAGAASSGTSLSRM*RWITSGTACGSLAMS 555
EA+HQVAWR S SRPT AG ASSGTSLS * WITS TACGS AM
Sbjct: 39 EAKHQVAWRTSLQST*TSSAQGSGSTSRPTPAGEASSGTSLSPT*PWITSATACGSSAML 218
Query: 554 AITPTTATTGVRSRSSTPLR*RMSRARTSGRLG*SRASPTRPSPGSACRTSSSLVVRLSG 375
A TPT+ATTG RS+S TP R*RMSRARTS RLG*SRA PTRPSPGSACRTSSSL VRLS
Sbjct: 219 ATTPTSATTGARSQSLTP*R*RMSRARTSRRLG*SRALPTRPSPGSACRTSSSLEVRLSS 398
Query: 374 RGSARLSAVALSTCSRP 324
R +S AL P
Sbjct: 399 REVQAVSGGALDXQPSP 449
Score = 121 bits (258), Expect(4) = 3e-061
Identities = 51/63 (80%), Positives = 52/63 (82%)
Frame = +2 / -3
Query: 569 IRRPYRTLSSVTSETVMFLMKPPLPVLVLTWIPNPELKKFKCSARTFSTPPDVSLPTAKP 748
IRRP RTLS VTSETV F MKPPLPVLVL WIPNPELKKF+CSARTFSTPPDVSLP
Sbjct: 204 IRRP*RTLSRVTSETVTFRMKPPLPVLVLMWIPNPELKKFRCSARTFSTPPDVSLPQRSR 25
Query: 749 ANG 757
G
Sbjct: 24 QKG 16
Score = 106 bits (227), Expect(4) = 3e-061
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = +2 / -3
Query: 371 HGRTGAPPVNLTFDRQIREKAELGMPLISPASLTFWPWTFFTVRASTI 514
HG TGAPPV+LTFDRQIREKAEL MPLISPASL FWPWTFF VRASTI
Sbjct: 402 HGWTGAPPVSLTFDRQIREKAELAMPLISPASLMFWPWTFFIVRASTI 259
Score = 43.2 bits (88), Expect(3) = 4e-083
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -3 / +2
Query: 361 GCQRWRSRRAAVPVHRT 311
GCQRWRSRRAAV VHRT
Sbjct: 410 GCQRWRSRRAAVAVHRT 460
Score = 42.8 bits (87), Expect(3) = 1e-061
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / -2
Query: 311 SSVHGDGCTSRAPPLTA 361
SSVHGDGC SRAPPLTA
Sbjct: 460 SSVHGDGCXSRAPPLTA 410
Score = 41.8 bits (85), Expect(3) = 2e-071
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = -1 / +3
Query: 363 EAVSGGALDVQPSPCTEL 310
+AVSGGALD QPSPCTEL
Sbjct: 408 QAVSGGALDXQPSPCTEL 461
Score = 40.9 bits (83), Expect(4) = 3e-061
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = +3 / -3
Query: 306 KSVLCTGTAARRERHR*QP 362
++VLCT TAARRERHR*QP
Sbjct: 465 EAVLCTATAARRERHR*QP 409
Score = 40.0 bits (81), Expect(2) = 1e-052
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1 / -1
Query: 304 GSQFCARGRLHVESATADSL 363
G QFCAR RL VESATADSL
Sbjct: 467 GKQFCARRRLXVESATADSL 408
Score = 30.4 bits (60), Expect(3) = 4e-083
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -1 / +3
Query: 771 ITGSSPFAGFAV 736
ITGSSPFAGFAV
Sbjct: 3 ITGSSPFAGFAV 38
Score = 28.6 bits (56), Expect(3) = 1e-061
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / -2
Query: 737 TAKPANGEEPVI 772
TAKPA GEEPVI
Sbjct: 37 TAKPAKGEEPVI 2
Score = 25.8 bits (50), Expect(4) = 3e-061
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 742 EASKRGGACD 771
EA KRGGACD
Sbjct: 32 EAGKRGGACD 3
Score = 24.9 bits (48), Expect(3) = 2e-071
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / +2
Query: 772 DHRLLPVCWLR 740
DHRLLP C LR
Sbjct: 2 DHRLLPFCRLR 34
>gb|CW156725.1|CW156725 104_559_11146842_148_36377_067 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146842, DNA
sequence
Length = 399
Score = 302 bits (653), Expect = 9e-081
Identities = 120/132 (90%), Positives = 129/132 (97%)
Frame = -1 / -3
Query: 702 LAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHPDDSYNRS 523
LAEHLNFF+SGFG+H+KTNTGRGGFIRN+TVSDVTLDNVRYGLRIVGDVGNHPD+ YNRS
Sbjct: 397 LAEHLNFFSSGFGMHIKTNTGRGGFIRNVTVSDVTLDNVRYGLRIVGDVGNHPDERYNRS 218
Query: 522 ALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGAPVRPWKCEAVSGGA 343
ALPIVDALT+KNVQGQN++EAGLIKGI NSAFSRICLSNVK TGGAPV+PWKCEAVSGGA
Sbjct: 217 ALPIVDALTIKNVQGQNIKEAGLIKGIANSAFSRICLSNVKLTGGAPVQPWKCEAVSGGA 38
Query: 342 LDVQPSPCTELT 307
LDVQPSPCTELT
Sbjct: 37 LDVQPSPCTELT 2
Score = 263 bits (569), Expect = 3e-069
Identities = 107/132 (81%), Positives = 109/132 (82%)
Frame = -3 / -2
Query: 703 PCRTLELLQLRVWDPCQDQHRQGRLHQEHHCLGCDAG*RPVRPADRWRCRQSPRRQLQPE 524
PCR ELLQLRV D QDQHRQGRLH E HCL D G*RP+RPADR RC Q PRR LQPE
Sbjct: 398 PCRAPELLQLRVRDAHQDQHRQGRLHPERHCLRRDPG*RPLRPADRRRCWQPPRRALQPE 219
Query: 523 CAPDRRRPYGKECPGPERQGGWADQGHPQLGLLPDLPVERQVHWWCACPAVEVRGCQRWR 344
AP+R RP KECPGPE QGGWADQGH QLGLLPDLPVERQ HW CACPAVEVRGCQRWR
Sbjct: 218 RAPNR*RPDDKECPGPEHQGGWADQGHCQLGLLPDLPVERQAHWRCACPAVEVRGCQRWR 39
Query: 343 SRRAAVPVHRTD 308
SRRAAV VHRTD
Sbjct: 38 SRRAAVAVHRTD 3
Score = 226 bits (488), Expect = 5e-058
Identities = 99/132 (75%), Positives = 108/132 (81%)
Frame = +1 / +2
Query: 307 SQFCARGRLHVESATADSLALPRPDRRTTSELDVRQADPGEGRVGDALDQPSLPDVLALD 486
SQFCAR RLHVESATADSLALPR DRRT+SELDVRQADPGEGRVG+ALDQPSL DVLALD
Sbjct: 2 SQFCARRRLHVESATADSLALPRLDRRTSSELDVRQADPGEGRVGNALDQPSLLDVLALD 181
Query: 487 ILYRKGVDDRERTPXXXXXXXXXXXXNDPQAVPDVIQRHIRDSDVPDEAAPACVGLDMDP 666
ILYR+GV+D ER P +DPQAV DVIQ H+ DSDVPDEA+PA VGLD+ P
Sbjct: 182 ILYRQGVNDWERAPVVALVGVVANIADDPQAVADVIQGHVGDSDVPDEASPAGVGLDVHP 361
Query: 667 KP*VEEVQVFCK 702
+P* EEVQV CK
Sbjct: 362 EP*AEEVQVLCK 397
Score = 210 bits (453), Expect = 3e-053
Identities = 95/133 (71%), Positives = 100/133 (75%)
Frame = +3 / +1
Query: 306 KSVLCTGTAARRERHR*QPRTSTAGQAHHQXXXXXXXXXXXXPSWGCP*SAQPP*RSGPG 485
KSVLCT TAARRERHR*QPRTSTAGQAH Q PSW CP*SAQPP* SGPG
Sbjct: 1 KSVLCTATAARRERHR*QPRTSTAGQAHLQ*A*RSTGRSGRRPSWQCP*SAQPP*CSGPG 180
Query: 486 HSLP*GRRRSGAHSGCSCRRGDCRHRQRSAGRTGRYPASHPRQ*CS**SRPCLCWS*HGS 665
HSL GR+R GA SGCS RRG C+HR+RSAGR+GRYP S RQ* S *S PC CWS* S
Sbjct: 181 HSLSSGRQRLGARSGCSARRGGCQHRRRSAGRSGRYPGSRRRQ*RSG*SLPCRCWS*CAS 360
Query: 666 QTLS*RSSSVLQG 704
+TLS*RSS LQG
Sbjct: 361 RTLS*RSSGALQG 399
Score = 205 bits (443), Expect = 8e-052
Identities = 98/117 (83%), Positives = 100/117 (85%)
Frame = -2 / -1
Query: 656 SRPTQAGAASSGTSLSRM*RWITSGTACGSLAMSAITPTTATTGVRSRSSTPLR*RMSRA 477
SRPT AG ASSGTSLS * WITS TACGS AM A TPT+ATTG RS+S TP R*RMSRA
Sbjct: 351 SRPTPAGEASSGTSLSPT*PWITSATACGSSAMLATTPTSATTGARSQSLTP*R*RMSRA 172
Query: 476 RTSGRLG*SRASPTRPSPGSACRTSSSLVVRLSGRGSARLSAVALSTCSRPRAQN*L 306
RTS RLG*SRA PTRPSPGSACRTSSSL VRLS RGSARLSAVALSTCSR RAQN*L
Sbjct: 171 RTSRRLG*SRALPTRPSPGSACRTSSSLEVRLSSRGSARLSAVALSTCSRRRAQN*L 1
Score = 159 bits (341), Expect(2) = 6e-058
Identities = 64/69 (92%), Positives = 65/69 (94%)
Frame = +2 / +3
Query: 308 VSSVHGDGCTSRAPPLTASHFHGRTGAPPVNLTFDRQIREKAELGMPLISPASLTFWPWT 487
VSSVHGDGCTSRAPPLTASHFHG TGAPPV+LTFDRQIREKAEL MPLISPASL FWPWT
Sbjct: 3 VSSVHGDGCTSRAPPLTASHFHGWTGAPPVSLTFDRQIREKAELAMPLISPASLMFWPWT 182
Query: 488 FFTVRASTI 514
FF VRASTI
Sbjct: 183 FFIVRASTI 209
Score = 87.7 bits (185), Expect(2) = 6e-058
Identities = 38/45 (84%), Positives = 39/45 (86%)
Frame = +2 / +3
Query: 569 IRRPYRTLSSVTSETVMFLMKPPLPVLVLTWIPNPELKKFKCSAR 703
IRRP RTLS VTSETV F MKPPLPVLVL IPNPELKKF+CSAR
Sbjct: 264 IRRP*RTLSRVTSETVTFRMKPPLPVLVLMCIPNPELKKFRCSAR 398
>gb|BG357766.1|BG357766 OV2_30_A08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 539
Score = 248 bits (535), Expect(2) = 9e-072
Identities = 94/123 (76%), Positives = 109/123 (88%)
Frame = -1 / +3
Query: 1029 SNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDD 850
SN+V ++SPFWNIHPVYC NVV+ N+ ILAPHDSPNTDGIDPDSSSN+CIED YISTGDD
Sbjct: 171 SNIVLKNSPFWNIHPVYCDNVVVTNMMILAPHDSPNTDGIDPDSSSNVCIEDSYISTGDD 350
Query: 849 SIAIKSGWDEYGIAYGRPSSGITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFNSG 670
+AIKSGWDEYGIAYGRPSSGIT+RR+ GSSPF+G A+GSE SGGV +VL E + F+SG
Sbjct: 351 LVAIKSGWDEYGIAYGRPSSGITIRRVRGSSPFSGIAIGSEASGGVRDVLVEDCSIFDSG 530
Query: 669 FGI 661
+GI
Sbjct: 531 YGI 539
Score = 177 bits (382), Expect(2) = 8e-051
Identities = 78/122 (63%), Positives = 91/122 (74%)
Frame = +2 / -2
Query: 662 IPNPELKKFKCSARTFSTPPDVSLPTAKPANGEEPVIRRTVIPELGRP*AIPYSSQPLLM 841
+P P K + S RT TPP+ SLP A P NG+EP+ RR V+PELGRP AIPYSS PLL+
Sbjct: 538 MP*PLSKMLQSSTRTSRTPPEASLPMAMPLNGDEPLTRRIVMPELGRPYAIPYSSHPLLI 359
Query: 842 AMESSPVEM*QSSMQMLLLESGSIPSVLGESCGARIVTFLITTLLQ*TGWMFQNGES*KT 1021
A SSPV+M +SSM L LESGSIPSV GESCGA+I+ + TTL Q*TGWMFQNGE +T
Sbjct: 358 ATRSSPVDMYESSMHTLELESGSIPSVFGESCGAKIIMLVTTTLSQ*TGWMFQNGEFLRT 179
Query: 1022 TL 1027
L
Sbjct: 178 ML 173
Score = 112 bits (240), Expect(2) = 5e-030
Identities = 52/123 (42%), Positives = 74/123 (60%)
Frame = +1 / -1
Query: 676 VEEVQVFCKDVLHAT*CLASDREASKRGGACDPPHGDSRTGAAIGDSILIPATLDGDGIV 855
VE+ V +DV H LA+D +A++R A PP D+ A+ D +L+P LD +V
Sbjct: 524 VEDAAVLHQDVAHPAGGLAADGDAAERRRAPHPPDRDAGARPAVRDPVLVPPALDRHQVV 345
Query: 856 TSRNVAILDADVAAGIWINSIRVGGVMWS*DSHVSDHNIAAINRMDVPEWRILKDDIGDN 1035
V +LDA V A IWI+S+ V GVMW D HV ++I A+NR+DVPE +L+DD+
Sbjct: 344 AGGYVRVLDAHVGARIWIDSVCVWGVMWRQDHHVGYNHIVAVNRVDVPER*VLEDDVARC 165
Query: 1036 DIR 1044
+ R
Sbjct: 164 ECR 156
Score = 45.1 bits (92), Expect(2) = 8e-051
Identities = 21/43 (48%), Positives = 24/43 (55%)
Frame = +2 / -3
Query: 1046 ELISSRR*GLV*SXXXXFHISHHALP*PPIVPFSPVMTTS*SP 1174
E ++S R GLV S H+ HH P P I P SPVM TS P
Sbjct: 153 ECMNSTRFGLVCSRVLRLHMFHHTSPWPSITPLSPVMATSRRP 25
Score = 45.1 bits (92), Expect(2) = 9e-072
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = -1 / +2
Query: 1173 GLQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDI 1036
GL+DV G WW+MW+ L +TRP+L+E M S+ I
Sbjct: 26 GLRDVAITGDKGVIDGQGEVWWNMWRRRTLEHTRPNLVEFMHSTGI 163
Score = 40.5 bits (82), Expect(2) = 5e-030
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1 / -2
Query: 1051 HQLKKVRPCVEQXXXLPHIPPRAALTTNSSILACDDNI 1164
H+L KVRP V + PH+PP L + S++ C+ ++
Sbjct: 148 HELHKVRPGVLKSPSPPHVPPHLTLAIDHSLVTCNGDV 35
>gb|CW403680.1|CW403680 fsbb001f095i07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095i07, DNA
sequence
Length = 641
Score = 200 bits (432), Expect(2) = 2e-065
Identities = 77/107 (71%), Positives = 92/107 (85%)
Frame = -1 / -3
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSPFAGFAVGSET 724
DSSSN+CIED YISTGDD +AIKSGWDEYGIAYGRPSSGIT+RR+ GSSPF+G A+GSE
Sbjct: 489 DSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRGSSPFSGIAIGSEA 310
Query: 723 SGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVR 583
SGGV +VL E + F+SG+GIH+KTN GRGG+IRN+TV +V + VR
Sbjct: 309 SGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVTVDNVRMSGVR 169
Score = 138 bits (297), Expect(2) = 6e-035
Identities = 64/110 (58%), Positives = 74/110 (67%)
Frame = +2 / +2
Query: 584 RTLSSVTSETVMFLMKPPLPVLVLTWIPNPELKKFKCSARTFSTPPDVSLPTAKPANGEE 763
RT T TV F M PP P LVL W+P P K + S RT TPP+ SLP A P NG+E
Sbjct: 170 RTPLMRTLSTVTFRM*PPRPTLVLMWMP*PLSKMLQSSTRTSRTPPEASLPMAMPLNGDE 349
Query: 764 PVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSI 913
P+ RR V+PELGRP AIPYSS PLL+A SSPV+M +SSM L LES S+
Sbjct: 350 PLTRRIVMPELGRPYAIPYSSHPLLIATRSSPVDMYESSMHTLELESASM 499
Score = 70.7 bits (148), Expect(2) = 2e-065
Identities = 27/54 (50%), Positives = 41/54 (75%)
Frame = -1 / -3
Query: 579 GLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRI 418
G+RI GDVG+HPD +++ A+P+VDA+ + NV G NV+ G ++GI +S F+RI
Sbjct: 162 GVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRI 1
Score = 30.9 bits (61), Expect(2) = 6e-035
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +1 / +1
Query: 418 DPGEGRVGDALDQPSLPDVLALDILYRKGVDDR 516
DP EGR DAL +P + DV A + GV R
Sbjct: 1 DPREGRAPDALQRPRVLDVDAPHVADAHGVHQR 99
>gb|BF704870.1|BF704870 FM1_52_E09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 571
Score = 180 bits (387), Expect(2) = 3e-060
Identities = 70/111 (63%), Positives = 88/111 (79%)
Frame = -1 / +3
Query: 1086 LLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGID 907
L YTR +L+ELM S I +SN+ +SP WNIHPVY SN+V++ +TILAP +SPNTDGI+
Sbjct: 9 LKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGIN 188
Query: 906 PDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
PDS S++ IEDCYI +GDD +AIKSGWDEYGI+YG PS I +RR+T SP
Sbjct: 189 PDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSP 341
Score = 99.1 bits (210), Expect(2) = 2e-025
Identities = 54/104 (51%), Positives = 64/104 (61%)
Frame = +2 / -1
Query: 755 GEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGES 934
G+ V RR + LG P +PYSS PLL+A +SSP M*QSS++ ESG +PSVLGE
Sbjct: 340 GDTHVSRRITMCWLGIPYEMPYSSHPLLIATQSSPDTM*QSSIRTCEQESGLMPSVLGEF 161
Query: 935 CGARIVTFLITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR 1066
GAR+V T LL *TGWMF GE LE + E ISS R
Sbjct: 160 VGARMVMPCTTMLLL*TGWMFHAGELSSVRLEM*MVSECISSIR 29
Score = 74.4 bits (156), Expect(2) = 3e-060
Identities = 28/74 (37%), Positives = 48/74 (64%)
Frame = -1 / +3
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
A A+GSE SGG+++V AE + NS G+ +KT GRG +++++ V +TL +++
Sbjct: 348 AVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLSTMKWVFW 527
Query: 570 IVGDVGNHPDDSYN 529
+ G+ +HPDD Y+
Sbjct: 528 MTGNYKSHPDDKYD 569
Score = 38.6 bits (78), Expect(2) = 2e-025
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +2 / -1
Query: 635 PLPVLVLTWIPNPELKKFKCSARTFSTPPDVSLPTA 742
P P VL P+ EL SART PPD+SLP+A
Sbjct: 463 PRPTAVLMRTPDSELIAVMSSARTSWMPPDISLPSA 356
>gb|AW284695.1|AW284695 LG1_214_D03.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 137 bits (293), Expect(2) = 3e-053
Identities = 53/104 (50%), Positives = 74/104 (71%)
Frame = -1 / -3
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
AG A GSE SGG+ +V AE + NS GI +KT GRGG+++N+ V+DV+ DNV +R
Sbjct: 312 AGLAFGSEMSGGISDVRAEGIRIVNSVHGIRIKTAPGRGGYVKNVYVADVSFDNVSIAIR 133
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIP 439
I G+ G HPDD YN+SALP + +T+K+V G N+ AG+++GIP
Sbjct: 132 ITGNYGEHPDDRYNKSALPTISNITIKDVVGVNIGVAGMLQGIP 1
Score = 94.1 bits (199), Expect(2) = 3e-053
Identities = 33/50 (66%), Positives = 41/50 (82%)
Frame = -1 / -3
Query: 906 PDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSS 757
PDSS+N+CIEDCYI GDD + IKSGWDEYGI++ PSS I++R ITG +
Sbjct: 471 PDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIRNITGQT 322
>gb|BG241689.1|BG241689 RHIZ2_49_F04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 451
Score = 205 bits (442), Expect = 1e-051
Identities = 75/138 (54%), Positives = 103/138 (74%)
Frame = -1 / +3
Query: 1170 LQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNI 991
L DV+ G+ WW ++ L YTRPHL+ELM S+++++SN+ F++SPFWNI
Sbjct: 15 LTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNI 194
Query: 990 HPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGI 811
HPVYCS V++++VTILAP +SPNTDG+ PDSS+N+CI CY+ GDD I IKSGWDEYGI
Sbjct: 195 HPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGI 374
Query: 810 AYGRPSSGITVRRITGSS 757
++ +PSS I++ ITG +
Sbjct: 375 SFAQPSSNISISDITGET 428
Score = 117 bits (250), Expect = 3e-025
Identities = 65/134 (48%), Positives = 78/134 (58%)
Frame = +2 / -1
Query: 764 PVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGESCGA 943
PV+ +I ELG +PYSSQPLLM + SSP *Q M + ESG PSV GE GA
Sbjct: 421 PVMSLMLILELG*ANEMPYSSQPLLMTITSSPFLT*Q*LMHTFVEESGLTPSVFGEFKGA 242
Query: 944 RIVTFLITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHHALP 1123
RIVT +T LQ TGW+FQNGE K L+ E I+S R GLV* + H P
Sbjct: 241 RIVTCWTSTWLQYTGWIFQNGEFLKVRLDMTTLVEYINSTRCGLV*FNVWLRNQPHQIAP 62
Query: 1124 *PPIVPFSPVMTTS 1165
*P + P +PV+ TS
Sbjct: 61 *PSMEPLAPVIITS 20
>gb|BG465618.1|BG465618 RHIZ2_46_G02.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 439
Score = 205 bits (442), Expect = 1e-051
Identities = 75/138 (54%), Positives = 103/138 (74%)
Frame = -1 / +3
Query: 1170 LQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNI 991
L DV+ G+ WW ++ L YTRPHL+ELM S+++++SN+ F++SPFWNI
Sbjct: 15 LTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNI 194
Query: 990 HPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGI 811
HPVYCS V++++VTILAP +SPNTDG+ PDSS+N+CI CY+ GDD I IKSGWDEYGI
Sbjct: 195 HPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGI 374
Query: 810 AYGRPSSGITVRRITGSS 757
++ +PSS I++ ITG +
Sbjct: 375 SFAQPSSNISISDITGET 428
Score = 117 bits (250), Expect = 3e-025
Identities = 65/134 (48%), Positives = 78/134 (58%)
Frame = +2 / -1
Query: 764 PVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGESCGA 943
PV+ +I ELG +PYSSQPLLM + SSP *Q M + ESG PSV GE GA
Sbjct: 421 PVMSLMLILELG*ANEMPYSSQPLLMTITSSPFLT*Q*LMHTFVEESGLTPSVFGEFKGA 242
Query: 944 RIVTFLITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHHALP 1123
RIVT +T LQ TGW+FQNGE K L+ E I+S R GLV* + H P
Sbjct: 241 RIVTCWTSTWLQYTGWIFQNGEFLKVRLDMTTLVEYINSTRCGLV*FNVWLRNQPHQIAP 62
Query: 1124 *PPIVPFSPVMTTS 1165
*P + P +PV+ TS
Sbjct: 61 *PSMEPLAPVIITS 20
>gb|CW274398.1|CW274398 104_747_11404406_148_35373_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404406, DNA
sequence
Length = 696
Score = 147 bits (315), Expect(2) = 1e-051
Identities = 57/156 (36%), Positives = 93/156 (59%)
Frame = -1 / +3
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 138 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 317
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG 391
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC N G
Sbjct: 318 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRG 497
Query: 390 GAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFC 283
W CE+V G A +V P+PC E +S+C
Sbjct: 498 IRRQDRWHCESVYGEAHEVFPAPCEEFRKNGSSSWC 605
Score = 78.5 bits (165), Expect(2) = 1e-051
Identities = 25/43 (58%), Positives = 38/43 (88%)
Frame = -1 / +3
Query: 882 IEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
IEDCYI +GDD +A+KSGWD+YGI+ G+PS+ I ++R++G++P
Sbjct: 3 IEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTP 131
>gb|CW484404.1|CW484404 fsbb001f246i15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f246i15, DNA
sequence
Length = 712
Score = 138 bits (295), Expect(3) = 8e-051
Identities = 55/126 (43%), Positives = 81/126 (64%)
Frame = -1 / -3
Query: 762 SSPFAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVR 583
SS A A GSE SGG+ ++ HL +S GI KT+ GRGG+I + +S+V ++NV
Sbjct: 500 SSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVH 321
Query: 582 YGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNV 403
G+ G+ HPDDS++ S LP +D +T+KN+ G N+ AG++ GI N+ F+ ICLSN+
Sbjct: 320 VGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNL 141
Query: 402 KFTGGA 385
F+ A
Sbjct: 140 NFSMAA 123
Score = 70.3 bits (147), Expect(3) = 8e-051
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = -1 / -3
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRI 769
DS SN+CIED IS ++I++KSGWD+YGI++GRP+S I + R+
Sbjct: 644 DSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRV 510
Score = 33.1 bits (66), Expect(3) = 8e-051
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -3
Query: 372 WKCEAVSGGALDVQPSPCTELTSTSGT 292
W C VSG + V P PCTEL S +
Sbjct: 104 WSCSNVSGYSEAVFPEPCTELRDPSSS 24
>gb|CW243932.1|CW243932 104_704_11220317_148_37582_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220317, DNA
sequence
Length = 709
Score = 138 bits (295), Expect(3) = 8e-051
Identities = 55/126 (43%), Positives = 81/126 (64%)
Frame = -1 / +3
Query: 762 SSPFAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVR 583
SS A A GSE SGG+ ++ HL +S GI KT+ GRGG+I + +S+V ++NV
Sbjct: 186 SSSGAALAFGSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVH 365
Query: 582 YGLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNV 403
G+ G+ HPDDS++ S LP +D +T+KN+ G N+ AG++ GI N+ F+ ICLSN+
Sbjct: 366 VGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNL 545
Query: 402 KFTGGA 385
F+ A
Sbjct: 546 NFSMAA 563
Score = 70.3 bits (147), Expect(3) = 8e-051
Identities = 25/45 (55%), Positives = 36/45 (80%)
Frame = -1 / +3
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRI 769
DS SN+CIED IS ++I++KSGWD+YGI++GRP+S I + R+
Sbjct: 42 DSCSNLCIEDSTISVSHEAISLKSGWDKYGISFGRPTSDIHISRV 176
Score = 33.1 bits (66), Expect(3) = 8e-051
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / +3
Query: 372 WKCEAVSGGALDVQPSPCTELTSTSGT 292
W C VSG + V P PCTEL S +
Sbjct: 582 WSCSNVSGYSEAVFPEPCTELRDPSSS 662
>gb|CN126701.1|CN126701 RHOH1_18_E04.g1_A002 Acid- and alkaline-treated roots Sorghum bicolor
cDNA clone RHOH1_18_E04_A002 5', mRNA sequence
Length = 643
Score = 183 bits (395), Expect(2) = 1e-050
Identities = 70/120 (58%), Positives = 91/120 (75%)
Frame = -1 / +2
Query: 1113 WWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPH 934
WW + L YTR +L+ELM S I +SN+ +SP W+IHPVY SN+V++ +TILAP
Sbjct: 32 WWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWSIHPVYSSNIVVQGITILAPT 211
Query: 933 DSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
+SPNTDGI+PDS S++ IEDCYI +GDD +AIKSGWDEYGI+YG PS I +R++T SP
Sbjct: 212 NSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIMIRQLTCVSP 391
Score = 99.6 bits (211), Expect(2) = 5e-024
Identities = 58/130 (44%), Positives = 72/130 (55%)
Frame = +2 / -2
Query: 755 GEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGES 934
G+ V R ++ LG P +PYSS PLL+A +SSP M*QSS++ ESG +PSVLGE
Sbjct: 390 GDTHVS*RIMMCWLGIPYEMPYSSHPLLIATQSSPDTM*QSSIRTCEQESGLMPSVLGEF 211
Query: 935 CGARIVTFLITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHH 1114
GAR+V T LL *TGWM GE LE + E ISS R V ++ HH
Sbjct: 210 VGARMVMPCTTMLLL*TGWMLHAGELSSVRLEM*MVSECISSIRYPRVYLSWFLWNFDHH 31
Query: 1115 ALP*PPIVPF 1144
P P + F
Sbjct: 30 IAPCPSMCRF 1
Score = 38.6 bits (78), Expect(2) = 1e-050
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = -1 / +2
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKT 649
A A+GSE SGG+++V AE + NS G+ +KT
Sbjct: 398 AVIALGSEMSGGIQDVRAEDIAAINSESGVRIKT 499
Score = 33.6 bits (67), Expect(2) = 5e-024
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2 / -2
Query: 647 LVLTWIPNPELKKFKCSARTFSTPPDVSLPTA 742
+VL P+ EL SART PPD+SLP+A
Sbjct: 501 VVLMRTPDSELIAAMSSARTSWMPPDISLPSA 406
>gb|BG241700.1|BG241700 RHIZ2_49_G04.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 417
Score = 199 bits (430), Expect = 5e-050
Identities = 73/134 (54%), Positives = 100/134 (74%)
Frame = -1 / +3
Query: 1170 LQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNI 991
L DV+ G+ WW ++ L YTRPHL+ELM S+++++SN+ F++SPFWNI
Sbjct: 15 LTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNI 194
Query: 990 HPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGI 811
HPVYCS V++++VTILAP +SPNTDG+ PDSS+N+CI CY+ GDD I IKSGWDEYGI
Sbjct: 195 HPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGI 374
Query: 810 AYGRPSSGITVRRI 769
++ +PSS I++ I
Sbjct: 375 SFAQPSSNISISDI 416
Score = 113 bits (242), Expect = 4e-024
Identities = 63/128 (49%), Positives = 75/128 (58%)
Frame = +2 / -3
Query: 782 VIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGESCGARIVTFL 961
+I ELG +PYSSQPLLM + SSP *Q M + ESG PSV GE GARIVT
Sbjct: 403 LILELG*ANEMPYSSQPLLMTITSSPFLT*Q*LMHTFVEESGLTPSVFGEFKGARIVTCW 224
Query: 962 ITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHHALP*PPIVP 1141
+T LQ TGW+FQNGE K L+ E I+S R GLV* + H P*P + P
Sbjct: 223 TSTWLQYTGWIFQNGEFLKVRLDMTTLVEYINSTRCGLV*FNVWLRNQPHQIAP*PSMEP 44
Query: 1142 FSPVMTTS 1165
+PV+ TS
Sbjct: 43 LAPVIITS 20
>gb|CW149826.1|CW149826 104_549_11142703_116_36303_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142703, DNA
sequence
Length = 706
Score = 127 bits (273), Expect(2) = 5e-050
Identities = 50/136 (36%), Positives = 82/136 (60%)
Frame = -1 / +3
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 294 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 473
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG 391
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC N G
Sbjct: 474 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRG 653
Query: 390 GAPVRPWKCEAVSGGA 343
W CE+V G A
Sbjct: 654 IRRQDRWHCESVYGEA 701
Score = 92.3 bits (195), Expect(2) = 5e-050
Identities = 30/50 (60%), Positives = 44/50 (88%)
Frame = -1 / +3
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
DSSS +CIEDCYI +GDD +A+KSGWD+YGI+ G+PS+ I ++R++G++P
Sbjct: 138 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTP 287
>gb|AW671617.1|AW671617 LG1_348_A07.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 657
Score = 199 bits (429), Expect = 7e-050
Identities = 72/131 (54%), Positives = 99/131 (75%)
Frame = -1 / +1
Query: 1170 LQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNI 991
L DV+ G+ WW ++ L YTRPHL+ELM S+++++SN+ F++SPFWNI
Sbjct: 259 LTDVIITGANGSIDGQGAIWWGWFRNHTLNYTRPHLVELMYSTNVVISNLTFKNSPFWNI 438
Query: 990 HPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGI 811
HPVYCS V++++VTILAP +SPNTDG+ PDSS+N+CI CY+ GDD I IKSGWDEYGI
Sbjct: 439 HPVYCSQVLVQHVTILAPLNSPNTDGVSPDSSTNVCINHCYVRNGDDVIVIKSGWDEYGI 618
Query: 810 AYGRPSSGITV 778
++ +PSS I++
Sbjct: 619 SFAQPSSNISI 651
Score = 113 bits (242), Expect = 4e-024
Identities = 63/128 (49%), Positives = 75/128 (58%)
Frame = +2 / -2
Query: 782 VIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGESCGARIVTFL 961
+I ELG +PYSSQPLLM + SSP *Q M + ESG PSV GE GARIVT
Sbjct: 647 LILELG*ANEMPYSSQPLLMTITSSPFLT*Q*LMHTFVEESGLTPSVFGEFKGARIVTCW 468
Query: 962 ITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHHALP*PPIVP 1141
+T LQ TGW+FQNGE K L+ E I+S R GLV* + H P*P + P
Sbjct: 467 TSTWLQYTGWIFQNGEFLKVRLDMTTLVEYINSTRCGLV*FNVWLRNQPHQIAP*PSMEP 288
Query: 1142 FSPVMTTS 1165
+PV+ TS
Sbjct: 287 LAPVIITS 264
>gb|BE361563.1|BE361563 DG1_72_F05.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 508
Score = 191 bits (412), Expect = 2e-047
Identities = 77/139 (55%), Positives = 97/139 (69%)
Frame = -1 / +3
Query: 1170 LQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNI 991
L DVV G+ WW + L YTR +L+ELM S I +SN+ +SP WNI
Sbjct: 81 LTDVVITGNNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNI 260
Query: 990 HPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGI 811
HPVY SN+V++ +TILAP +SPNTDGI+PDS S++ IEDCYI +GDD +AIKSGWDEYGI
Sbjct: 261 HPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGI 440
Query: 810 AYGRPSSGITVRRITGSSP 754
+YG PS I +RR+T SP
Sbjct: 441 SYGMPSQHIVIRRLTCVSP 497
Score = 123 bits (264), Expect = 4e-027
Identities = 68/137 (49%), Positives = 80/137 (58%)
Frame = +2 / -1
Query: 755 GEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGES 934
G+ V RR + LG P +PYSS PLL+A +SSP M*QSS++ ESG +PSVLGE
Sbjct: 496 GDTHVSRRITMCWLGIPYEMPYSSHPLLIATQSSPDTM*QSSIRTCEQESGLMPSVLGEF 317
Query: 935 CGARIVTFLITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHH 1114
GAR+V T LL *TGWMF GE LE + E ISS R V ++ HH
Sbjct: 316 VGARMVMPCTTMLLL*TGWMFHAGELSSVRLEM*MVSECISSIRYPRVYLSWFLWNFDHH 137
Query: 1115 ALP*PPIVPFSPVMTTS 1165
P P IVP PVMTTS
Sbjct: 136 IAPCPSIVPLLPVMTTS 86
>gb|BI211295.1|BI211295 IP1_59_A01.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 436
Score = 191 bits (412), Expect = 2e-047
Identities = 77/139 (55%), Positives = 97/139 (69%)
Frame = -1 / +1
Query: 1170 LQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNI 991
L DVV G+ WW + L YTR +L+ELM S I +SN+ +SP WNI
Sbjct: 16 LTDVVITGNNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNI 195
Query: 990 HPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGI 811
HPVY SN+V++ +TILAP +SPNTDGI+PDS S++ IEDCYI +GDD +AIKSGWDEYGI
Sbjct: 196 HPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGI 375
Query: 810 AYGRPSSGITVRRITGSSP 754
+YG PS I +RR+T SP
Sbjct: 376 SYGMPSQHIVIRRLTCVSP 432
Score = 123 bits (264), Expect = 4e-027
Identities = 68/137 (49%), Positives = 80/137 (58%)
Frame = +2 / -3
Query: 755 GEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGES 934
G+ V RR + LG P +PYSS PLL+A +SSP M*QSS++ ESG +PSVLGE
Sbjct: 431 GDTHVSRRITMCWLGIPYEMPYSSHPLLIATQSSPDTM*QSSIRTCEQESGLMPSVLGEF 252
Query: 935 CGARIVTFLITTLLQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHH 1114
GAR+V T LL *TGWMF GE LE + E ISS R V ++ HH
Sbjct: 251 VGARMVMPCTTMLLL*TGWMFHAGELSSVRLEM*MVSECISSIRYPRVYLSWFLWNFDHH 72
Query: 1115 ALP*PPIVPFSPVMTTS 1165
P P IVP PVMTTS
Sbjct: 71 IAPCPSIVPLLPVMTTS 21
>gb|CL178953.1|CL178953 104_387_10894956_116_31906_252 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894956, DNA
sequence
Length = 676
Score = 147 bits (315), Expect(2) = 7e-046
Identities = 57/156 (36%), Positives = 93/156 (59%)
Frame = -1 / -1
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 562 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 383
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG 391
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC N G
Sbjct: 382 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRG 203
Query: 390 GAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFC 283
W CE+V G A +V P+PC E +S+C
Sbjct: 202 IRRQDRWHCESVYGEAHEVFPAPCEEFRKNGSSSWC 95
Score = 59.3 bits (123), Expect(2) = 7e-046
Identities = 18/35 (51%), Positives = 31/35 (88%)
Frame = -1 / -1
Query: 861 TGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSS 757
+GDD +A+KSGWD+YGI+ G+PS+ I ++R++G++
Sbjct: 676 SGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTT 572
>gb|CW135897.1|CW135897 104_520_11118089_148_34834_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118089, DNA
sequence
Length = 590
Score = 113 bits (242), Expect(2) = 9e-046
Identities = 42/112 (37%), Positives = 73/112 (65%)
Frame = -1 / +3
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 252 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 431
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRIC 415
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC
Sbjct: 432 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEIC 587
Score = 92.3 bits (195), Expect(2) = 9e-046
Identities = 30/50 (60%), Positives = 44/50 (88%)
Frame = -1 / +3
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
DSSS +CIEDCYI +GDD +A+KSGWD+YGI+ G+PS+ I ++R++G++P
Sbjct: 96 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTP 245
>gb|BE361554.1|BE361554 DG1_72_E04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 474
Score = 181 bits (389), Expect = 2e-044
Identities = 72/131 (54%), Positives = 91/131 (69%)
Frame = -1 / +3
Query: 1170 LQDVVXXXXXXXXXXXGSAWWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNI 991
L DVV G+ WW + L YTR +L+ELM S I +SN+ +SP WNI
Sbjct: 81 LTDVVITGNNGTIDGQGAMWWSKFHKNQLKYTRGYLIELMHSDTIYISNLTLLNSPAWNI 260
Query: 990 HPVYCSNVVIRNVTILAPHDSPNTDGIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGI 811
HPVY SN+V++ +TILAP +SPNTDGI+PDS S++ IEDCYI +GDD +AIKSGWDEYGI
Sbjct: 261 HPVYSSNIVVQGITILAPTNSPNTDGINPDSCSHVRIEDCYIVSGDDCVAIKSGWDEYGI 440
Query: 810 AYGRPSSGITV 778
+YG PS I +
Sbjct: 441 SYGMPSQHIVI 473
Score = 118 bits (253), Expect = 1e-025
Identities = 64/124 (51%), Positives = 74/124 (59%)
Frame = +2 / -3
Query: 794 LGRP*AIPYSSQPLLMAMESSPVEM*QSSMQMLLLESGSIPSVLGESCGARIVTFLITTL 973
LG P +PYSS PLL+A +SSP M*QSS++ ESG +PSVLGE GAR+V T L
Sbjct: 457 LGIPYEMPYSSHPLLIATQSSPDTM*QSSIRTCEQESGLMPSVLGEFVGARMVMPCTTML 278
Query: 974 LQ*TGWMFQNGES*KTTLETMISEELISSRR*GLV*SXXXXFHISHHALP*PPIVPFSPV 1153
L *TGWMF GE LE + E ISS R V ++ HH P P IVP PV
Sbjct: 277 LL*TGWMFHAGELSSVRLEM*MVSECISSIRYPRVYLSWFLWNFDHHIAPCPSIVPLLPV 98
Query: 1154 MTTS 1165
MTTS
Sbjct: 97 MTTS 86
>gb|CW041743.1|CW041743 104_275_10506722_114_30284 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10506722, DNA
sequence
Length = 728
Score = 142 bits (304), Expect(3) = 3e-044
Identities = 56/75 (74%), Positives = 64/75 (85%)
Frame = -1 / +2
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSPFAGFAVGSET 724
DSSSN+CIED YISTGDD +AIKSGWDEYGIAYGR SSGIT+RR+ GSSPF+G A+GSE
Sbjct: 503 DSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRXSSGITIRRVRGSSPFSGIAIGSEA 682
Query: 723 SGGVENVLAEHLNFF 679
SGGV +VL E + F
Sbjct: 683 SGGVRDVLVEDCSIF 727
Score = 106 bits (226), Expect(2) = 2e-028
Identities = 47/78 (60%), Positives = 56/78 (71%)
Frame = +2 / -3
Query: 680 KKFKCSARTFSTPPDVSLPTAKPANGEEPVIRRTVIPELGRP*AIPYSSQPLLMAMESSP 859
K + S RT TPP+ SLP A P NG+EP+ RR V+PEL RP AIPYSS PLL+A SSP
Sbjct: 726 KMLQSSTRTSRTPPEASLPMAMPLNGDEPLTRRIVMPELXRPYAIPYSSHPLLIATRSSP 547
Query: 860 VEM*QSSMQMLLLESGSI 913
V+M +SSM L LES S+
Sbjct: 546 VDMYESSMHTLELESASM 493
Score = 53.3 bits (110), Expect(3) = 3e-044
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -1 / +1
Query: 975 SNVVIRNVTILAPHDSPNTDGIDP 904
SNVV+ N+ ILAPHDSPNTDGIDP
Sbjct: 295 SNVVVTNMMILAPHDSPNTDGIDP 366
Score = 44.1 bits (90), Expect(2) = 2e-028
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2 / -1
Query: 905 GSIPSVLGESCGARIVTFLITTLLQ 979
GSIPSV GESCGA+I+ + TTLL+
Sbjct: 365 GSIPSVFGESCGAKIIMLVTTTLLK 291
Score = 28.6 bits (56), Expect(3) = 3e-044
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1 / +1
Query: 999 WNIHPVYC 976
WNIHPVYC
Sbjct: 1 WNIHPVYC 24
>gb|BH245640.1|BH245640 pSB1108 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1108 similar to
putative polygalacturonase (T05995), DNA sequence
Length = 811
Score = 96.8 bits (205), Expect(4) = 1e-043
Identities = 38/95 (40%), Positives = 63/95 (66%)
Frame = -1 / +2
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 527 SGVGFGSEMSGGIFNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 706
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVR 466
+H DD+Y+R+ALP + + + +V G +++
Sbjct: 707 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQ 811
Score = 50.1 bits (103), Expect(4) = 1e-043
Identities = 15/28 (53%), Positives = 25/28 (89%)
Frame = -1 / +2
Query: 837 KSGWDEYGIAYGRPSSGITVRRITGSSP 754
KSGWD+YGI+ G+PS+ I ++R++G++P
Sbjct: 437 KSGWDQYGISLGKPSTNIVIQRVSGTTP 520
Score = 47.3 bits (97), Expect(4) = 1e-043
Identities = 16/23 (69%), Positives = 20/23 (86%)
Frame = -1 / +1
Query: 903 DSSSNICIEDCYISTGDDSIAIK 835
DSSS +CIEDCYI +GDD +A+K
Sbjct: 370 DSSSEVCIEDCYIESGDDLVAVK 438
Score = 46.9 bits (96), Expect(4) = 1e-043
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 981 YCSNVVIRNVTILAPHDSPNTDGIDP 904
+ SNVV++++TILAP ++PNTDGIDP
Sbjct: 103 FASNVVMKDLTILAPLNAPNTDGIDP 180
>gb|BF657097.1|BF657097 OV2_18_E09.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 419
Score = 168 bits (361), Expect(2) = 5e-043
Identities = 66/107 (61%), Positives = 84/107 (78%)
Frame = -1 / +2
Query: 1086 LLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNVVIRNVTILAPHDSPNTDGID 907
L YTR +L+ELM S I +SN+ +SP WNIHPVY SN+V++ +TILAP +SPNTDGI+
Sbjct: 11 LKYTRGYLIELMHSDTIYISNLTLLNSPAWNIHPVYSSNIVVQGITILAPTNSPNTDGIN 190
Query: 906 PDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRIT 766
PDS S++ IED YI +GDD +AIKSGWDEY I+YG PS I +RR+T
Sbjct: 191 PDSCSHVRIEDXYIVSGDDCVAIKSGWDEYCISYGMPSQHIVIRRLT 331
Score = 28.6 bits (56), Expect(2) = 5e-043
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -1 / +2
Query: 762 SSPFAGFAVGSETSGGVENVLAEHL 688
S+ A A+GSE SGG+++V AE +
Sbjct: 338 STTSAVIALGSEMSGGIQDVRAEDI 412
>gb|CW116093.1|CW116093 104_491_11106924_116_34599_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106924, DNA
sequence
Length = 379
Score = 116 bits (248), Expect(2) = 4e-040
Identities = 44/70 (62%), Positives = 57/70 (81%)
Frame = -1 / -2
Query: 792 SGITVRRITGSSPFAGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNIT 613
SGIT+RR+ GSSPF+G A+GSE SGGV +VL E + F+SG+GIH+KTN GRGG+IRN+T
Sbjct: 378 SGITIRRVRGSSPFSGIAIGSEASGGVRDVLVEDCSIFDSGYGIHIKTNVGRGGYIRNVT 199
Query: 612 VSDVTLDNVR 583
V +V + VR
Sbjct: 198 VDNVRMSGVR 169
Score = 70.7 bits (148), Expect(2) = 4e-040
Identities = 27/54 (50%), Positives = 41/54 (75%)
Frame = -1 / -2
Query: 579 GLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRI 418
G+RI GDVG+HPD +++ A+P+VDA+ + NV G NV+ G ++GI +S F+RI
Sbjct: 162 GVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRI 1
>gb|CW244720.1|CW244720 104_705_11220757_116_37589_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220757, DNA
sequence
Length = 674
Score = 92.3 bits (195), Expect(3) = 7e-040
Identities = 30/50 (60%), Positives = 44/50 (88%)
Frame = -1 / -2
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
DSSS +CIEDCYI +GDD +A+KSGWD+YGI+ G+PS+ I ++R++G++P
Sbjct: 334 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTP 185
Score = 71.2 bits (149), Expect(3) = 7e-040
Identities = 27/56 (48%), Positives = 40/56 (71%)
Frame = -1 / -2
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVR 583
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+
Sbjct: 178 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVK 11
Score = 45.5 bits (93), Expect(3) = 7e-040
Identities = 17/24 (70%), Positives = 23/24 (95%)
Frame = -1 / -2
Query: 975 SNVVIRNVTILAPHDSPNTDGIDP 904
SNVV++++TILAP ++PNTDGIDP
Sbjct: 595 SNVVMKDLTILAPLNAPNTDGIDP 524
>gb|CW135896.1|CW135896 104_520_11118089_116_34838_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11118089, DNA
sequence
Length = 689
Score = 147 bits (315), Expect(3) = 4e-039
Identities = 57/156 (36%), Positives = 93/156 (59%)
Frame = -1 / -2
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 547 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 368
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG 391
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC N G
Sbjct: 367 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRG 188
Query: 390 GAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFC 283
W CE+V G A +V P+PC E +S+C
Sbjct: 187 IRRQDRWHCESVYGEAHEVFPAPCEEFRKNGSSSWC 80
Score = 29.0 bits (57), Expect(3) = 4e-039
Identities = 8/14 (57%), Positives = 13/14 (92%)
Frame = -1 / -3
Query: 849 SIAIKSGWDEYGIA 808
S+A++ GWD+YGI+
Sbjct: 648 SVAVRVGWDQYGIS 607
Score = 25.8 bits (50), Expect(3) = 4e-039
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 879 EDCYISTGDD 850
EDCYI +GDD
Sbjct: 677 EDCYIESGDD 648
>gb|CW431565.1|CW431565 fsbb001f145n07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f145n07, DNA
sequence
Length = 629
Score = 89.0 bits (188), Expect(2) = 3e-037
Identities = 34/53 (64%), Positives = 42/53 (79%)
Frame = -1 / +2
Query: 912 IDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
+D DS S++ IEDCYI +GDD +AIKSGWDEYGI+YG PS I +RR+T SP
Sbjct: 107 MDADSCSHVRIEDCYIVSGDDCVAIKSGWDEYGISYGMPSQHIVIRRLTCVSP 265
Score = 88.6 bits (187), Expect(2) = 3e-037
Identities = 34/94 (36%), Positives = 61/94 (64%)
Frame = -1 / +2
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
A A+GSE SGG+++V AE + NS G+ +KT GRG +++++ V +TL +++
Sbjct: 272 AVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFW 451
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNV 469
+ G+ +HPDD Y+ +A+P+VD ++ ++V V
Sbjct: 452 MTGNYKSHPDDKYDPNAIPVVDNISYQDVVATGV 553
>gb|CW244721.1|CW244721 104_705_11220757_148_37590_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220757, DNA
sequence
Length = 664
Score = 92.3 bits (195), Expect(4) = 1e-036
Identities = 30/50 (60%), Positives = 44/50 (88%)
Frame = -1 / +1
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
DSSS +CIEDCYI +GDD +A+KSGWD+YGI+ G+PS+ I ++R++G++P
Sbjct: 430 DSSSEVCIEDCYIESGDDLVAVKSGWDQYGISLGKPSTNIVIQRVSGTTP 579
Score = 46.9 bits (96), Expect(4) = 1e-036
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 981 YCSNVVIRNVTILAPHDSPNTDGIDP 904
+ SNVV++++TILAP ++PNTDGIDP
Sbjct: 163 FASNVVMKDLTILAPLNAPNTDGIDP 240
Score = 43.7 bits (89), Expect(4) = 1e-036
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -1 / +2
Query: 1038 IIVSNVVFQDSPFWNIHPVYCSNV 967
I++S++ ++SPFW +HPVYC +V
Sbjct: 2 ILISSITLRNSPFWTVHPVYCRSV 73
Score = 33.1 bits (66), Expect(4) = 1e-036
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1 / +1
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNS 673
+G GSE SGG+ NVL L+ +NS
Sbjct: 586 SGVGFGSEMSGGISNVLVRDLHVWNS 663
>gb|CD210963.1|CD210963 HS1_58_F06.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_58_F06_A012 3', mRNA sequence
Length = 694
Score = 94.1 bits (199), Expect(2) = 9e-035
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = -1 / +3
Query: 915 GIDPDSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVR 775
GIDPDSS+N+CIEDCYI GDD + IKSGWDEYGI++ PSS I++R
Sbjct: 3 GIDPDSSTNVCIEDCYIRNGDDIVVIKSGWDEYGISFAHPSSNISIR 143
Score = 78.0 bits (164), Expect(2) = 9e-035
Identities = 29/52 (55%), Positives = 39/52 (75%)
Frame = -1 / +2
Query: 549 HPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFT 394
HPDDSYN+SALP + +T+K+V G N+ AG+++GIP FS ICLSNV +
Sbjct: 146 HPDDSYNKSALPTISNITIKDVVGVNIGVAGMLQGIPGDNFSNICLSNVSLS 301
>gb|CW266049.1|CW266049 104_735_11232219_148_35267_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11232219, DNA
sequence
Length = 756
Score = 149 bits (319), Expect = 1e-034
Identities = 58/119 (48%), Positives = 82/119 (68%)
Frame = -1 / +1
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
AG A GSE SGG+ V A L NS GI +KT GRGG+++N+ ++DV++DNV +R
Sbjct: 52 AGIAFGSEMSGGISEVRAVGLRIVNSLHGIRIKTAPGRGGYVKNVYIADVSMDNVSMAIR 231
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFT 394
I G+ G HPDD Y+R+ALP++ +T+K+V G N+ AG+++GI FS ICLSNV +
Sbjct: 232 ITGNYGEHPDDKYDRTALPVISNITIKDVVGVNIGVAGILEGIQGDNFSNICLSNVSLS 408
>gb|CW149827.1|CW149827 104_549_11142703_148_36304_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11142703, DNA
sequence
Length = 723
Score = 147 bits (315), Expect = 4e-034
Identities = 57/156 (36%), Positives = 93/156 (59%)
Frame = -1 / -2
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 668 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 489
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG 391
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC N G
Sbjct: 488 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRG 309
Query: 390 GAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFC 283
W CE+V G A +V P+PC E +S+C
Sbjct: 308 IRRQDRWHCESVYGEAHEVFPAPCEEFRKNGSSSWC 201
>gb|CW171019.1|CW171019 104_581_11155520_116_36524_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155520, DNA
sequence
Length = 729
Score = 147 bits (315), Expect = 4e-034
Identities = 57/156 (36%), Positives = 93/156 (59%)
Frame = -1 / -3
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 694 SGVGFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 515
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG 391
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC N G
Sbjct: 514 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRG 335
Query: 390 GAPVRPWKCEAVSGGALDVQPSPCTELTSTSGTSFC 283
W CE+V G A +V P+PC E +S+C
Sbjct: 334 IRRQDRWHCESVYGEAHEVFPAPCEEFRKNGSSSWC 227
>gb|BZ779793.1|BZ779793 ii34f05.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34f05, DNA sequence
Length = 697
Score = 133 bits (284), Expect(2) = 7e-034
Identities = 51/117 (43%), Positives = 77/117 (65%)
Frame = -1 / +2
Query: 735 GSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDV 556
GSE SGG+ ++ HL +S GI KT+ GRGG+I + +S+V ++NV G+ G+
Sbjct: 11 GSEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNC 190
Query: 555 GNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGA 385
HPDDS++ S LP +D +T+KN+ G N+ AG++ GI N+ F+ ICLSN+ F+ A
Sbjct: 191 STHPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAA 361
Score = 33.1 bits (66), Expect(2) = 7e-034
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / +2
Query: 372 WKCEAVSGGALDVQPSPCTELTSTSGT 292
W C VSG + V P PCTEL S +
Sbjct: 380 WSCSNVSGYSEAVFPEPCTELRDPSSS 460
>gb|CW243931.1|CW243931 104_704_11220317_116_37581_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11220317, DNA
sequence
Length = 617
Score = 130 bits (278), Expect(2) = 5e-033
Identities = 50/116 (43%), Positives = 76/116 (65%)
Frame = -1 / -3
Query: 732 SETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVG 553
SE SGG+ ++ HL +S GI KT+ GRGG+I + +S+V ++NV G+ G+
Sbjct: 615 SEMSGGISDIHVNHLRIHDSYKGISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNCS 436
Query: 552 NHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGA 385
HPDDS++ S LP +D +T+KN+ G N+ AG++ GI N+ F+ ICLSN+ F+ A
Sbjct: 435 THPDDSFDLSDLPTIDQVTMKNMVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAA 268
Score = 33.1 bits (66), Expect(2) = 5e-033
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -3
Query: 372 WKCEAVSGGALDVQPSPCTELTSTSGT 292
W C VSG + V P PCTEL S +
Sbjct: 249 WSCSNVSGYSEAVFPEPCTELRDPSSS 169
>gb|CW488152.1|CW488152 fsbb001f254g10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f254g10, DNA
sequence
Length = 794
Score = 77.6 bits (163), Expect(3) = 2e-032
Identities = 23/49 (46%), Positives = 39/49 (79%)
Frame = -1 / -3
Query: 1113 WWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNV 967
WW++W L +TR HL+EL++S++I++S++ ++SPFW +HPVYC +V
Sbjct: 585 WWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCRSV 439
Score = 59.7 bits (124), Expect(3) = 2e-032
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = -1 / -2
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWD 823
DSSS +CIEDCYI +GDD +A+KSGWD
Sbjct: 82 DSSSEVCIEDCYIESGDDLVAVKSGWD 2
Score = 46.9 bits (96), Expect(3) = 2e-032
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = -1 / -2
Query: 981 YCSNVVIRNVTILAPHDSPNTDGIDP 904
+ SNVV++++TILAP ++PNTDGIDP
Sbjct: 349 FASNVVMKDLTILAPLNAPNTDGIDP 272
>gb|CW116094.1|CW116094 104_491_11106924_148_34595_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11106924, DNA
sequence
Length = 544
Score = 105 bits (224), Expect(2) = 6e-031
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -1 / +2
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAYGRPSSGITVRRITG 763
DSSSN+CIED YISTGDD +AIKSGWDEYGIAYGRPSSGIT+RR+ G
Sbjct: 404 DSSSNVCIEDSYISTGDDLVAIKSGWDEYGIAYGRPSSGITIRRVRG 544
Score = 53.3 bits (110), Expect(2) = 6e-031
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = -1 / +1
Query: 975 SNVVIRNVTILAPHDSPNTDGIDP 904
SNVV+ N+ ILAPHDSPNTDGIDP
Sbjct: 196 SNVVVTNMMILAPHDSPNTDGIDP 267
>gb|CW407741.1|CW407741 fsbb001f101f14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f101f14, DNA
sequence
Length = 710
Score = 87.2 bits (184), Expect(3) = 6e-030
Identities = 34/63 (53%), Positives = 48/63 (76%)
Frame = -1 / +2
Query: 579 GLRIVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVK 400
G+RI GDVG+HPD +++ A+P+VDA+ + NV G NV+ G ++GI +S F+RICLSNVK
Sbjct: 83 GVRIAGDVGDHPDAHFSQLAVPLVDAVRISNVWGVNVQHPGSLEGIRSSPFTRICLSNVK 262
Query: 399 FTG 391
G
Sbjct: 263 LFG 271
Score = 42.8 bits (87), Expect(3) = 6e-030
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = -1 / +2
Query: 657 VKTNTGRGGFIRNITVSDVTLDNVR 583
+KTN GRGG+IRN+TV +V + VR
Sbjct: 2 IKTNVGRGGYIRNVTVDNVRMSGVR 76
Score = 40.9 bits (83), Expect(3) = 6e-030
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = -1 / +2
Query: 372 WKCEAVSGGALDVQPSPCTELTST 301
W+C V G AL VQPSPC EL ++
Sbjct: 293 WRCRDVRGAALGVQPSPCAELATS 364
>gb|CN126444.1|CN126444 RHOH1_17_E05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_17_E05_A002 3', mRNA sequence
Length = 826
Score = 99.6 bits (211), Expect(2) = 4e-029
Identities = 39/102 (38%), Positives = 65/102 (63%)
Frame = -1 / +3
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
AG ++GSE SGGV +VL E+++ ++S G+ +KT GRG ++ NI ++TL+NVR G+
Sbjct: 99 AGVSIGSEMSGGVSDVLVENVHVWDSRRGVRIKTAPGRGAYVTNIVYRNITLENVRVGIV 278
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKG 445
I D HPD+ ++ A+P + ++ ++ G VR I+G
Sbjct: 279 IKTDYNEHPDEGFDPKAVPTIGNISYTSIHGHRVRVPVRIQG 404
Score = 50.6 bits (104), Expect(2) = 4e-029
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = -1 / +3
Query: 843 AIKSGWDEYGIAYGRPSSGITVRRI 769
AIKSGWD+YGIAYGRPS+ I ++ +
Sbjct: 3 AIKSGWDQYGIAYGRPSANIVIQNV 77
>gb|CW452574.1|CW452574 fsbb001f193d06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f193d06, DNA
sequence
Length = 328
Score = 81.7 bits (172), Expect(2) = 4e-029
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +3 / -3
Query: 813 FHTHPSHS*WRWNRHQSKCSNPRCRCCCWNL 905
FHTHPS *W+W+RH SKCSNP+CRCCCWNL
Sbjct: 320 FHTHPSRC*WQWHRHPSKCSNPQCRCCCWNL 228
Score = 79.4 bits (167), Expect(2) = 1e-027
Identities = 30/33 (90%), Positives = 31/33 (93%)
Frame = -1 / +2
Query: 903 DSSSNICIEDCYISTGDDSIAIKSGWDEYGIAY 805
DSSSNICIEDCYISTGDD+IAI SGWDEYGI Y
Sbjct: 230 DSSSNICIEDCYISTGDDAIAINSGWDEYGIPY 328
Score = 68.4 bits (143), Expect(2) = 4e-029
Identities = 24/28 (85%), Positives = 26/28 (92%)
Frame = +3 / -1
Query: 903 LDQFHPCWGSHVELG*SRF*SQHCCNKQ 986
LDQFHPCWGSHVELG*S F*SQHCC ++
Sbjct: 136 LDQFHPCWGSHVELG*SHF*SQHCCTQE 53
Score = 66.6 bits (139), Expect(2) = 4e-023
Identities = 31/33 (93%), Positives = 31/33 (93%)
Frame = +2 / -2
Query: 806 *AIPYSSQPLLMAMESSPVEM*QSSMQMLLLES 904
* IPYSSQPLLMAM SSPVEM*QSSMQMLLLES
Sbjct: 327 *GIPYSSQPLLMAMASSPVEM*QSSMQMLLLES 229
Score = 65.7 bits (137), Expect(2) = 1e-027
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = -3 / +3
Query: 979 LQQCCDQKRDYPSST*LPQHGWN*SRFQ 896
+QQCCDQK DYPSST*LPQHGWN*SR++
Sbjct: 60 VQQCCDQKCDYPSST*LPQHGWN*SRYR 143
Score = 64.8 bits (135), Expect(2) = 4e-022
Identities = 25/25 (100%), Positives = 25/25 (100%)
Frame = -1 / +1
Query: 978 CSNVVIRNVTILAPHDSPNTDGIDP 904
CSNVVIRNVTILAPHDSPNTDGIDP
Sbjct: 61 CSNVVIRNVTILAPHDSPNTDGIDP 135
Score = 63.4 bits (132), Expect(2) = 4e-023
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1 / -2
Query: 904 WINSIRVGGVMWS*DSHVSDHNIAA 978
WINSIRVGGVMWS*DSH+SDHNIAA
Sbjct: 135 WINSIRVGGVMWS*DSHISDHNIAA 61
Score = 62.0 bits (129), Expect(2) = 4e-022
Identities = 26/33 (78%), Positives = 27/33 (81%)
Frame = -3 / +1
Query: 904 RFQQQHLHRGLLHFDW*RFHRHQEWLG*VWNRL 806
RFQQQHLH GLLHFD *R H HQ+ LG*VWN L
Sbjct: 229 RFQQQHLH*GLLHFDG*RCHCHQQRLG*VWNPL 327
>gb|BG050368.1|BG050368 FM1_53_B09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 524
Score = 127 bits (271), Expect = 4e-028
Identities = 47/91 (51%), Positives = 66/91 (72%)
Frame = -1 / +3
Query: 666 GIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKN 487
GI +KT GRGG+++N+ V+DV+ DNV +RI G+ G HPDD YN+SALP + +T+K+
Sbjct: 12 GIRIKTAXGRGGYVKNVYVADVSFDNVSIAIRITGNYGEHPDDRYNKSALPTISNITIKD 191
Query: 486 VQGQNVREAGLIKGIPNSAFSRICLSNVKFT 394
V G N+ AG+++GIP FS ICLSNV +
Sbjct: 192 VVGVNIGVAGMLQGIPGDNFSNICLSNVSLS 284
>gb|CL193888.1|CL193888 104_417_10941238_116_32279_081 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10941238, DNA
sequence
Length = 486
Score = 114 bits (244), Expect(2) = 5e-028
Identities = 45/103 (43%), Positives = 68/103 (66%)
Frame = -1 / +3
Query: 693 HLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHPDDSYNRSALP 514
HL +S GI KT+ GRGG+I + +S+V ++NV G+ G+ HPDDS++ S LP
Sbjct: 9 HLRIHDSYKGISFKTSPGRGGYI*EVIISEVQMENVHVGIEFTGNCSTHPDDSFDLSDLP 188
Query: 513 IVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGA 385
+D +T+KN+ G N+ AG++ GI N+ F+ ICLSN+ F+ A
Sbjct: 189 TIDQVTMKNMVGTNISLAGVLSGIHNAPFTAICLSNLNFSMAA 317
Score = 31.8 bits (63), Expect(2) = 5e-028
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1 / +3
Query: 372 WKCEAVSGGALDVQPSPCTELTSTSGT 292
W C VSG + V P PCTE+ S +
Sbjct: 336 WSCSNVSGYSEAVFPEPCTEVRDQSSS 416
>gb|CW110476.1|CW110476 104_483_11103729_148_34523_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11103729, DNA
sequence
Length = 626
Score = 112 bits (240), Expect(2) = 7e-028
Identities = 42/94 (44%), Positives = 64/94 (68%)
Frame = -1 / -1
Query: 666 GIHVKTNTGRGGFIRNITVSDVTLDNVRYGLRIVGDVGNHPDDSYNRSALPIVDALTVKN 487
GI KT+ GRGG+I + +S+V ++NV G+ G+ HPDDS++ S LP +D +T+KN
Sbjct: 623 GISFKTSPGRGGYIEEVIISEVQMENVHVGIEFTGNCSTHPDDSFDLSDLPTIDQVTMKN 444
Query: 486 VQGQNVREAGLIKGIPNSAFSRICLSNVKFTGGA 385
+ G N+ AG++ GI N+ F+ ICLSN+ F+ A
Sbjct: 443 MVGTNISVAGVLSGIDNAPFTAICLSNLNFSMAA 342
Score = 33.1 bits (66), Expect(2) = 7e-028
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1 / -1
Query: 372 WKCEAVSGGALDVQPSPCTELTSTSGT 292
W C VSG + V P PCTEL S +
Sbjct: 323 WSCSNVSGYSEAVFPEPCTELRDPSSS 243
>gb|CW488151.1|CW488151 fsbb001f254g10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f254g10, DNA
sequence
Length = 789
Score = 77.6 bits (163), Expect(3) = 1e-027
Identities = 23/49 (46%), Positives = 39/49 (79%)
Frame = -1 / +2
Query: 1113 WWDMWKXXXLLYTRPHLLELMSSSDIIVSNVVFQDSPFWNIHPVYCSNV 967
WW++W L +TR HL+EL++S++I++S++ ++SPFW +HPVYC +V
Sbjct: 224 WWELWWNRTLNHTRGHLIELVNSTNILISSITLRNSPFWTVHPVYCRSV 370
Score = 46.9 bits (96), Expect(3) = 1e-027
Identities = 17/26 (65%), Positives = 24/26 (92%)
Frame = -1 / +1
Query: 981 YCSNVVIRNVTILAPHDSPNTDGIDP 904
+ SNVV++++TILAP ++PNTDGIDP
Sbjct: 460 FASNVVMKDLTILAPLNAPNTDGIDP 537
Score = 43.7 bits (89), Expect(3) = 1e-027
Identities = 15/21 (71%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 903 DSSSNICIEDCYISTGDDSIA 841
DSSS +CIEDCYI +GDD +A
Sbjct: 727 DSSSEVCIEDCYIESGDDLVA 789
>gb|CW372759.1|CW372759 fsbb001f048m23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f048m23, DNA
sequence
Length = 470
Score = 125 bits (267), Expect = 2e-027
Identities = 48/132 (36%), Positives = 80/132 (60%)
Frame = -1 / +1
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
+G GSE SGG+ NVL L+ +NS + +KT+ GRGG+I NIT+S+VT++ V+ +R
Sbjct: 70 SGVCFGSEMSGGISNVLVRDLHVWNSAQAVRLKTDVGRGGYITNITISNVTMEKVKVPIR 249
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNVREAGLIKGIPNSAFSRICLSNVKFTG 391
+H DD+Y+R+ALP + + + +V G +++ A +++ +P + + IC N G
Sbjct: 250 FSRGADDHSDDNYDRTALPRISNVLISDVVGVDLQRAPMLEAVPGAVYEEICFRNFSLRG 429
Query: 390 GAPVRPWKCEAV 355
W CE+V
Sbjct: 430 IRRQDRWHCESV 465
>gb|CN137707.1|CN137707 OX1_59_B09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_59_B09_A002 3', mRNA sequence
Length = 770
Score = 88.6 bits (187), Expect(2) = 3e-027
Identities = 34/94 (36%), Positives = 61/94 (64%)
Frame = -1 / +1
Query: 750 AGFAVGSETSGGVENVLAEHLNFFNSGFGIHVKTNTGRGGFIRNITVSDVTLDNVRYGLR 571
A A+GSE SGG+++V AE + NS G+ +KT GRG +++++ V +TL +++
Sbjct: 97 AVIALGSEMSGGIQDVRAEDITAINSESGVRIKTAVGRGAYVKDVFVRRMTLTTMKWVFW 276
Query: 570 IVGDVGNHPDDSYNRSALPIVDALTVKNVQGQNV 469
+ G+ +HPDD Y+ +A+P+VD ++ ++V V
Sbjct: 277 MTGNYKSHPDDKYDPNAIPVVDNISYQDVVATGV 378
Score = 55.1 bits (114), Expect(2) = 3e-027
Identities = 21/30 (70%), Positives = 24/30 (80%)
Frame = -1 / +1
Query: 843 AIKSGWDEYGIAYGRPSSGITVRRITGSSP 754
AIKSGWDEYGI+YG PS I +RR+T SP
Sbjct: 1 AIKSGWDEYGISYGMPSQHIVIRRLTCVSP 90
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,546,928,849
Number of Sequences: 832831
Number of extensions: 27984314
Number of successful extensions: 270624
Number of sequences better than 1.0e-020: 76
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 39759546787
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)