TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643604.2.1
(578 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW176244.1|CW176244 104_589_11158384_148_36680_062 Sorgh... 221 1e-088
gb|AW678787.1|AW678787 WS1_1_H05.g1_A002 Water-stressed 1 (... 121 1e-071
gb|CW105163.1|CW105163 104_474_11012772_116_34453_042 Sorgh... 169 5e-049
gb|CN149831.1|CN149831 WOUND1_65_D05.b1_A002 Wounded leaves... 169 5e-049
gb|CW403690.1|CW403690 fsbb001f095i13f0 Sorghum methylation... 169 5e-049
gb|BF422042.1|BF422042 FM1_12_C02.g1_A003 Floral-Induced Me... 169 5e-049
gb|CN147521.1|CN147521 WOUND1_50_F12.b1_A002 Wounded leaves... 166 3e-048
gb|CW105164.1|CW105164 104_474_11012772_148_34449_042 Sorgh... 149 5e-043
gb|CW403691.1|CW403691 fsbb001f095i13k0 Sorghum methylation... 169 4e-041
gb|CW365890.1|CW365890 fsbb001f038k04f0 Sorghum methylation... 153 2e-036
gb|CW365891.1|CW365891 fsbb001f038k04k0 Sorghum methylation... 153 2e-036
gb|CF489387.1|CF489387 POL1_57_F11.b1_A002 Pollen Sorghum b... 153 2e-036
gb|CW353450.1|CW353450 fsbb001f016d09f0 Sorghum methylation... 153 3e-036
gb|AW565318.1|AW565318 LG1_342_A06.g1_A002 Light Grown 1 (L... 153 3e-036
gb|BE594970.1|BE594970 PI1_48_B08.g1_A002 Pathogen induced ... 153 3e-036
gb|BE597334.1|BE597334 PI1_72_B09.g1_A002 Pathogen induced ... 153 3e-036
gb|BF705043.1|BF705043 RHIZ2_1_F10.g1_A003 Rhizome2 (RHIZ2)... 153 3e-036
gb|BG052508.1|BG052508 RHIZ2_26_A04.g1_A003 Rhizome2 (RHIZ2... 153 3e-036
gb|BG103243.1|BG103243 RHIZ2_19_H12.g1_A003 Rhizome2 (RHIZ2... 153 3e-036
gb|CD209113.1|CD209113 HS1_46_A12.b1_A012 Heat-shocked seed... 153 3e-036
gb|CF074385.1|CF074385 FE1_24_H07.b1_A002 Iron-deficient se... 153 3e-036
gb|BG357481.1|BG357481 OV2_30_D12.g1_A002 Ovary 2 (OV2) Sor... 152 4e-036
gb|CN126293.1|CN126293 RHOH1_16_G04.b1_A002 Acid- and alkal... 152 4e-036
gb|CN134750.1|CN134750 OX1_28_E12.b1_A002 Oxidatively-stres... 152 4e-036
gb|CN126382.1|CN126382 RHOH1_16_G04.g1_A002 Acid- and alkal... 152 5e-036
gb|CD427064.1|CD427064 SA1_17_G05.b1_A002 Salicylic acid-tr... 149 2e-035
gb|CF489555.1|CF489555 POL1_58_F10.b1_A002 Pollen Sorghum b... 149 3e-035
gb|CX613644.1|CX613644 GABR1_9_H06.b1_A002 GA- or brassinol... 149 3e-035
gb|AW923900.1|AW923900 WS1_30_E12.b1_A002 Water-stressed 1 ... 138 2e-033
gb|CX606300.1|CX606300 ANR1_2_F08.b1_A002 Anaerobic roots S... 141 1e-032
gb|CF485574.1|CF485574 POL1_32_G12.b1_A002 Pollen Sorghum b... 140 2e-032
gb|CW363768.1|CW363768 fsbb001f035i09k0 Sorghum methylation... 138 7e-032
gb|CW073807.1|CW073807 104_340_10781623_116_31470_103 Sorgh... 137 1e-031
gb|BF480784.1|BF480784 FM1_14_H09.g1_A003 Floral-Induced Me... 137 1e-031
gb|CW363767.1|CW363767 fsbb001f035i09f0 Sorghum methylation... 134 8e-031
gb|CD423436.1|CD423436 SA1_23_C04.b1_A002 Salicylic acid-tr... 132 6e-030
gb|CW368244.1|CW368244 fsbb001f042b22k0 Sorghum methylation... 132 6e-030
gb|CW223651.1|CW223651 104_659_11203029_148_37186_085 Sorgh... 95 8e-028
gb|AW679681.1|AW679681 WS1_30_E12.g1_A002 Water-stressed 1 ... 124 9e-028
gb|CW430454.1|CW430454 fsbb001f144c20f0 Sorghum methylation... 123 2e-027
gb|BG053517.1|BG053517 RHIZ2_10_B08.g1_A003 Rhizome2 (RHIZ2... 122 3e-027
gb|CW308233.1|CW308233 104_796_11468560_116_35731_054 Sorgh... 118 6e-026
gb|CW492772.1|CW492772 fsbb001f283d16k0 Sorghum methylation... 109 4e-023
gb|AW671681.1|AW671681 LG1_349_E04.b1_A002 Light Grown 1 (L... 106 2e-022
gb|BE596005.1|BE596005 PI1_51_B03.g1_A002 Pathogen induced ... 106 2e-022
gb|BM329226.1|BM329226 PIC1_35_A07.g1_A002 Pathogen-infecte... 106 2e-022
gb|BM329541.1|BM329541 PIC1_39_D08.g1_A002 Pathogen-infecte... 106 2e-022
gb|BM329963.1|BM329963 PIC1_45_E03.g1_A002 Pathogen-infecte... 106 2e-022
gb|BM330114.1|BM330114 PIC1_47_C12.g1_A002 Pathogen-infecte... 106 2e-022
gb|BM331672.1|BM331672 PIC1_59_C05.g1_A002 Pathogen-infecte... 106 2e-022
gb|CD462204.1|CD462204 SA1_40_B09.b1_A002 Salicylic acid-tr... 106 2e-022
gb|BM328737.1|BM328737 PIC1_26_A01.g1_A002 Pathogen-infecte... 105 6e-022
gb|CD236116.1|CD236116 SS1_32_H04.b1_A012 Salt-stressed see... 105 6e-022
>gb|CW176244.1|CW176244 104_589_11158384_148_36680_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11158384, DNA
sequence
Length = 724
Score = 221 bits (476), Expect(3) = 1e-088
Identities = 91/101 (90%), Positives = 93/101 (92%)
Frame = -3 / -1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPE RLGSSRGA
Sbjct: 490 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPECRLGSSRGAA 311
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTPVTTRKKK 274
EIKRHPFFEGLNWALIRWTAPPET KNIDTA T +KK+
Sbjct: 310 EIKRHPFFEGLNWALIRWTAPPETPKNIDTAAALATRKKKE 188
Score = 210 bits (454), Expect(2) = 2e-073
Identities = 90/100 (90%), Positives = 91/100 (91%)
Frame = +2 / +3
Query: 278 FLRVVTGVGAVSMFFRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLI 457
F V AVSMFF VSGGAVHRIKAQFRPSKKGCRLIS APLDEPSR+SGSFTSSPLI
Sbjct: 192 FFLRVASAAAVSMFFGVSGGAVHRIKAQFRPSKKGCRLISAAPLDEPSRHSGSFTSSPLI 371
Query: 458 RSRAWKLTAGLSGNFKPCEITFESVSSLPGPLNGVLP*SN 577
RSRAWKLTAGLSGNFKPCEITFESVSSLPGPLNGVLP*SN
Sbjct: 372 RSRAWKLTAGLSGNFKPCEITFESVSSLPGPLNGVLP*SN 491
Score = 199 bits (428), Expect(3) = 1e-073
Identities = 77/93 (82%), Positives = 85/93 (91%)
Frame = +1 / +2
Query: 298 CWCSVNVLQGLWWCGPPDQGPVQAFKEGMPLNLSGSSRRAKPVLWLFHKQPSDQISSVEA 477
C CS+NVL+GLWW PPDQGPV AF+EGMP NLSGSSRRA+P LWLFHKQPSD+IS VEA
Sbjct: 212 CCCSINVLRGLWWRSPPDQGPV*AFEEGMPFNLSGSSRRAEPALWLFHKQPSDKISCVEA 391
Query: 478 YSWIIRELQAL*DHI*ECFLIARSLEWCLAIE* 576
YSW++RELQAL*DHI*ECFLIARSLEWCL +E*
Sbjct: 392 YSWVVRELQAL*DHI*ECFLIARSLEWCLTVE* 490
Score = 174 bits (374), Expect(3) = 3e-063
Identities = 78/94 (82%), Positives = 83/94 (88%)
Frame = -2 / -3
Query: 577 ITLWQDTIQGTWQ*GNTLKCDLTGLEVP**SSCKLPRSRSDQRAACERARVPAWLVERSH 398
ITL DTIQGTWQ*GNTLKCDLTGLEVP* SCKLPR+RS QRAACERARVPA LVERS
Sbjct: 491 ITLR*DTIQGTWQ*GNTLKCDLTGLEVP*QPSCKLPRTRSYQRAACERARVPARLVERSR 312
Query: 397 *D*AASLL*RPELGLDPVDRTTRDPEEH*HCTNT 296
*D* ASLL RP+LGLDPVD TRDPEEH*+C++T
Sbjct: 311 *D*TASLLRRPKLGLDPVDCATRDPEEH*YCSST 210
Score = 169 bits (363), Expect(2) = 2e-052
Identities = 79/94 (84%), Positives = 80/94 (85%)
Frame = -1 / -2
Query: 578 NYSMARHHSRDLAMRKHSQM*SHRA*SSLIIQL*ASTLEI*SEGCL*KSQSTGLARREEP 399
NYS RHHSRDLAMRKHSQM*SHRA*SSL QL*AST EI SEGCL*KSQS G ARREEP
Sbjct: 492 NYSTVRHHSRDLAMRKHSQM*SHRA*SSLTTQL*ASTHEILSEGCL*KSQSAGSARREEP 313
Query: 398 LRLSGIPSLKA*TGP*SGGPHHQRP*RTLTLHQH 297
LRL+GIPS KA*TGP*SGG HQRP RTL L QH
Sbjct: 312 LRLNGIPSSKA*TGP*SGGLRHQRPRRTLILQQH 211
Score = 90.9 bits (192), Expect(3) = 1e-088
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -3 / -1
Query: 294 VTTRKKKEGKCLEFRLNGDDIEFELF*L*L*WHRCCSVKDIS 169
+ TRKKKEGKCLEFRLNGDDIEFELF*L*L*W+ CCS KDIS
Sbjct: 211 LATRKKKEGKCLEFRLNGDDIEFELF*L*L*WYHCCSPKDIS 86
Score = 86.8 bits (183), Expect(2) = 2e-073
Identities = 39/56 (69%), Positives = 42/56 (75%)
Frame = +1 / +2
Query: 133 GLRLLLLAYHDI*YILDTTTAMPLQLQLKELELDVVTIQPEFQTFAFLFLACRYRC 300
G + L + *YIL TT +PLQLQLKELELDVV IQPEFQTFAFLFLACR C
Sbjct: 50 GTKTTLASLS*Y*YILGTTAVIPLQLQLKELELDVVAIQPEFQTFAFLFLACRECC 217
Score = 76.7 bits (161), Expect(4) = 1e-044
Identities = 33/37 (89%), Positives = 33/37 (89%)
Frame = +3 / +1
Query: 468 RGSLQLDYQGTSSPVRSHLRVFPHCQVP*MVSCHRVI 578
RGSLQL QGTSSPVRSHLRVFPHCQVP*MVS RVI
Sbjct: 382 RGSLQLGCQGTSSPVRSHLRVFPHCQVP*MVSYRRVI 492
Score = 68.0 bits (142), Expect(4) = 1e-044
Identities = 31/40 (77%), Positives = 35/40 (87%)
Frame = +3 / +1
Query: 294 QVLVQCQCSSGSLVVRSTGSRPSSGLQRRDAA*SQWLLST 413
+VL+Q QCSSGSLV +STGSRPS GL+RRDA *SQ LLST
Sbjct: 208 RVLLQYQCSSGSLVAQSTGSRPSLGLRRRDAV*SQRLLST 327
Score = 65.2 bits (136), Expect(3) = 1e-073
Identities = 26/45 (57%), Positives = 28/45 (62%)
Frame = +3 / +1
Query: 168 LIYP*HYNSDXXXXXXXXXXXXCRHHSAGIPDICLPFSCVSLQVL 302
LIYP Y+SD CR HSAGIPDICLPFSCVS +L
Sbjct: 85 LIYPWDYSSDTTTATTKRARTRCRRHSAGIPDICLPFSCVSRVLL 219
Score = 61.1 bits (127), Expect(3) = 3e-063
Identities = 27/41 (65%), Positives = 27/41 (65%)
Frame = -1 / -2
Query: 290 RHARKRKANVWNSG*MVTTXXXXXXXXXXSGIAVVVSRIYQ 168
RHARKRKANVWNSG*M TT SGI VV RIYQ
Sbjct: 207 RHARKRKANVWNSG*MATTSSSSSFSCSCSGITAVVPRIYQ 85
Score = 57.9 bits (120), Expect(2) = 2e-052
Identities = 26/44 (59%), Positives = 28/44 (63%)
Frame = -2 / -3
Query: 301 NTCNDTQEKGRQMSGIPAEW*RHRVRXXXXXXXXXXXX*CQGYI 170
++ DTQEKGRQMSGIPAEW RHRVR * QGYI
Sbjct: 218 SSTRDTQEKGRQMSGIPAEWRRHRVRALLVVAVVVSLL*SQGYI 87
Score = 55.1 bits (114), Expect(3) = 1e-088
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / -2
Query: 169 KYHDKLARVVLVPLPCSFLLKVS 101
+YHDKLARVVLVPLPCSFLLKVS
Sbjct: 87 QYHDKLARVVLVPLPCSFLLKVS 19
Score = 52.4 bits (108), Expect(3) = 1e-073
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +2 / +1
Query: 101 TNFQQKTAGKRD*DYSC*LIMI 166
TNFQQKTAGKRD*DYSC*LIMI
Sbjct: 19 TNFQQKTAGKRD*DYSC*LIMI 84
Score = 51.9 bits (107), Expect(4) = 1e-044
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1 / +3
Query: 97 DD*LSTENCREEGLRLLLLAYHD 165
++*LSTENCREEGLRLLLLAYHD
Sbjct: 15 NN*LSTENCREEGLRLLLLAYHD 83
Score = 46.9 bits (96), Expect(3) = 3e-063
Identities = 22/24 (91%), Positives = 24/24 (100%)
Frame = -3 / -3
Query: 168 NIMIS*QE*S*SLFPAVFC*KLVI 97
+IMIS*QE*S*SLFPAVFC*KLV+
Sbjct: 86 SIMIS*QE*S*SLFPAVFC*KLVV 15
Score = 40.5 bits (82), Expect(4) = 1e-044
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = +2 / +3
Query: 170 DISLTLQQRCHYXXXXXXXXXXXXXXXXXXRHLPSFFLRVVTGVGAVSMF 319
DISL LQQ HY RHLPSFFLRV + F
Sbjct: 87 DISLGLQQ*YHYSYN*KSSNSMSSPFSRNSRHLPSFFLRVASAAAVSMFF 236
>gb|AW678787.1|AW678787 WS1_1_H05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 446
Score = 121 bits (258), Expect(4) = 1e-071
Identities = 50/61 (81%), Positives = 52/61 (85%)
Frame = -3 / +1
Query: 456 IRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTPVTTRKK 277
IRGLLVKEPE RLG SRGA EIKRHPFFEGLNWALIRWTAPPET KNIDTA T +KK
Sbjct: 1 IRGLLVKEPECRLGLSRGAAEIKRHPFFEGLNWALIRWTAPPETPKNIDTAAALATRKKK 180
Query: 276 K 274
+
Sbjct: 181 E 183
Score = 116 bits (247), Expect(4) = 5e-058
Identities = 42/54 (77%), Positives = 48/54 (88%)
Frame = +1 / -3
Query: 295 RCWCSVNVLQGLWWCGPPDQGPVQAFKEGMPLNLSGSSRRAKPVLWLFHKQPSD 456
+C CS+NVL+GLWW PPDQGPV AFK+GMP NLSGSSR+A+P LWLFHKQPSD
Sbjct: 162 KCCCSINVLRGLWWRSPPDQGPV*AFKKGMPFNLSGSSRQAEPALWLFHKQPSD 1
Score = 112 bits (239), Expect(3) = 2e-054
Identities = 48/59 (81%), Positives = 50/59 (84%)
Frame = +2 / -1
Query: 278 FLRVVTGVGAVSMFFRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPL 454
F V AVSMFF VSGGAVHRIKAQFRPSKKGCRLIS APLD+PSR+SGSFTSSPL
Sbjct: 179 FFLRVASAAAVSMFFGVSGGAVHRIKAQFRPSKKGCRLISAAPLDKPSRHSGSFTSSPL 3
Score = 103 bits (219), Expect(4) = 1e-048
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = -2 / +3
Query: 454 QRAACERARVPAWLVERSH*D*AASLL*RPELGLDPVDRTTRDPEEH*HCTNTCNDTQE 278
QRAACERARVPA LVERS *D* ASL *RP+LGLDPVD TRDPEEH*+C++TC+ ++
Sbjct: 3 QRAACERARVPARLVERSR*D*TASLF*RPKLGLDPVDCATRDPEEH*YCSSTCDTQEK 179
Score = 96.4 bits (204), Expect(3) = 2e-033
Identities = 44/54 (81%), Positives = 45/54 (83%)
Frame = -1 / +2
Query: 455 SEGCL*KSQSTGLARREEPLRLSGIPSLKA*TGP*SGGPHHQRP*RTLTLHQHL 294
SEGCL*KSQS G A REEPLRL+GIP LKA*TGP*SGG HQRP RTL L QHL
Sbjct: 2 SEGCL*KSQSAGSACREEPLRLNGIPFLKA*TGP*SGGLRHQRPRRTLILQQHL 163
Score = 90.9 bits (192), Expect(4) = 1e-071
Identities = 37/42 (88%), Positives = 39/42 (92%)
Frame = -3 / +1
Query: 294 VTTRKKKEGKCLEFRLNGDDIEFELF*L*L*WHRCCSVKDIS 169
+ TRKKKEGKCLEFRLNGDDIEFELF*L*L*W+ CCS KDIS
Sbjct: 160 LATRKKKEGKCLEFRLNGDDIEFELF*L*L*WYHCCSPKDIS 285
Score = 86.8 bits (183), Expect(3) = 2e-054
Identities = 39/56 (69%), Positives = 42/56 (75%)
Frame = +1 / -3
Query: 133 GLRLLLLAYHDI*YILDTTTAMPLQLQLKELELDVVTIQPEFQTFAFLFLACRYRC 300
G + L + *YIL TT +PLQLQLKELELDVV IQPEFQTFAFLFLACR C
Sbjct: 321 GTKTTLASLS*Y*YILGTTAVIPLQLQLKELELDVVAIQPEFQTFAFLFLACRKCC 154
Score = 70.3 bits (147), Expect(3) = 4e-029
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +3 / -2
Query: 294 QVLVQCQCSSGSLVVRSTGSRPSSGLQRRDAA*SQWLLST 413
QVL+Q QCSSGSLV +STGSRPS GLQ+RDA *SQ LLST
Sbjct: 163 QVLLQYQCSSGSLVAQSTGSRPSLGLQKRDAV*SQRLLST 44
Score = 62.9 bits (131), Expect(4) = 5e-058
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = +3 / -2
Query: 168 LIYP*HYNSDXXXXXXXXXXXXCRHHSAGIPDICLPFSCVSLQVL 302
LIYP Y+SD CR HSAGIP+ICLPFSCVS +L
Sbjct: 286 LIYPWDYSSDTTTATTKRARTRCRRHSAGIPNICLPFSCVSQVLL 152
Score = 61.1 bits (127), Expect(4) = 1e-071
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = -3 / +3
Query: 96 VGK*GKIGC*ACNFMPC*YHQILED 22
VGK*GK+GC ACNFMPC*YHQILED
Sbjct: 363 VGK*GKVGCSACNFMPC*YHQILED 437
Score = 61.1 bits (127), Expect(4) = 1e-048
Identities = 27/41 (65%), Positives = 27/41 (65%)
Frame = -1 / +2
Query: 290 RHARKRKANVWNSG*MVTTXXXXXXXXXXSGIAVVVSRIYQ 168
RHARKRKANVWNSG*M TT SGI VV RIYQ
Sbjct: 164 RHARKRKANVWNSG*MATTSSSSSFSCSCSGITAVVPRIYQ 286
Score = 55.1 bits (114), Expect(4) = 1e-071
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -2 / +2
Query: 169 KYHDKLARVVLVPLPCSFLLKVS 101
+YHDKLARVVLVPLPCSFLLKVS
Sbjct: 284 QYHDKLARVVLVPLPCSFLLKVS 352
Score = 54.7 bits (113), Expect(3) = 2e-033
Identities = 25/40 (62%), Positives = 25/40 (62%)
Frame = -2 / +3
Query: 289 DTQEKGRQMSGIPAEW*RHRVRXXXXXXXXXXXX*CQGYI 170
DTQEKGRQM GIPAEW RHRVR * QGYI
Sbjct: 165 DTQEKGRQMFGIPAEWRRHRVRALLVVAVVVSLL*SQGYI 284
Score = 52.8 bits (109), Expect(3) = 2e-054
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2 / -2
Query: 23 SSNI*WY*QGIKLQA*QPILPYFPT 97
SSNI*WY*QGIKLQA QP LP+FPT
Sbjct: 436 SSNI*WY*QGIKLQAEQPTLPHFPT 362
Score = 52.8 bits (109), Expect(4) = 5e-058
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = +3 / -3
Query: 24 LLIFDGINKA*SYRLNSQSYLTSQ 95
LLIFDGINKA*SYRLNSQ YLTSQ
Sbjct: 435 LLIFDGINKA*SYRLNSQPYLTSQ 364
Score = 50.1 bits (103), Expect(4) = 5e-058
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +2 / -2
Query: 101 TNFQQKTAGKRD*DYSC*LIMI 166
TNFQQKTAGKRD*+YSC*LIMI
Sbjct: 352 TNFQQKTAGKRD*NYSC*LIMI 287
Score = 49.6 bits (102), Expect(3) = 4e-029
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +3 / -3
Query: 102 LTFNRKLQGRGTKTTLASLS*Y 167
LTFN+KLQGRGTKTTLASLS*Y
Sbjct: 351 LTFNKKLQGRGTKTTLASLS*Y 286
Score = 47.3 bits (97), Expect(3) = 4e-029
Identities = 20/22 (90%), Positives = 20/22 (90%)
Frame = +1 / -1
Query: 31 YLMVLTRHKVTGLTANLTLLPN 96
YLMVLTRHKVTG TANLT LPN
Sbjct: 428 YLMVLTRHKVTG*TANLTSLPN 363
Score = 44.1 bits (90), Expect(4) = 1e-048
Identities = 21/24 (87%), Positives = 23/24 (95%)
Frame = -3 / +3
Query: 168 NIMIS*QE*S*SLFPAVFC*KLVI 97
+IMIS*QE* *SLFPAVFC*KLV+
Sbjct: 285 SIMIS*QE*F*SLFPAVFC*KLVV 356
Score = 41.8 bits (85), Expect(4) = 1e-048
Identities = 17/19 (89%), Positives = 19/19 (100%)
Frame = -1 / +1
Query: 92 GSKVRLAVKPVTLCLVNTI 36
GS+VRLAV+PVTLCLVNTI
Sbjct: 367 GSEVRLAVQPVTLCLVNTI 423
Score = 30.4 bits (60), Expect(3) = 2e-033
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -2 / +2
Query: 94 WEVR*DWXXXXXXXXXLIPSNIRR 23
WEVR* W LIPSNIRR
Sbjct: 365 WEVR*GWLFSL*LYALLIPSNIRR 436
>gb|CW105163.1|CW105163 104_474_11012772_116_34453_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012772, DNA
sequence
Length = 714
Score = 169 bits (363), Expect(2) = 5e-049
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPF+GPGN+ETL+NV+SQ L+FPDNP+VS +A+DLIRGLLVKEPE R GS RGA
Sbjct: 247 LLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAA 426
Query: 396 EIKRHPFFEGLNWALIRWTAPPET 325
EIK+HPFFEGLNWALIR APPET
Sbjct: 427 EIKQHPFFEGLNWALIRSAAPPET 498
Score = 132 bits (282), Expect = 6e-030
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = +2 / -2
Query: 326 VSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFK 505
VSGGA RI+AQF PSKKGC LIS APL++P+ +SGSFTS PLIRS A LT GLSGN +
Sbjct: 497 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 318
Query: 506 PCEITFESVSSLPGPLNGVLP 568
CE TF +VSS PGPL GVLP
Sbjct: 317 FCETTFANVSSFPGPLKGVLP 255
Score = 46.4 bits (95), Expect(2) = 5e-049
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -3 / +1
Query: 282 KKKEGKCLEFRLNGDDIEFELF* 214
+KKEGKCLEFR N +D+EFE+F*
Sbjct: 532 RKKEGKCLEFRSNSEDLEFEVF* 600
>gb|CN149831.1|CN149831 WOUND1_65_D05.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_65_D05_A002 3', mRNA sequence
Length = 685
Score = 169 bits (363), Expect(2) = 5e-049
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPF+GPGN+ETL+NV+SQ L+FPDNP+VS +A+DLIRGLLVKEPE R GS RGA
Sbjct: 191 LLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAA 370
Query: 396 EIKRHPFFEGLNWALIRWTAPPET 325
EIK+HPFFEGLNWALIR APPET
Sbjct: 371 EIKQHPFFEGLNWALIRSAAPPET 442
Score = 132 bits (282), Expect = 6e-030
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = +2 / -2
Query: 326 VSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFK 505
VSGGA RI+AQF PSKKGC LIS APL++P+ +SGSFTS PLIRS A LT GLSGN +
Sbjct: 441 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 262
Query: 506 PCEITFESVSSLPGPLNGVLP 568
CE TF +VSS PGPL GVLP
Sbjct: 261 FCETTFANVSSFPGPLKGVLP 199
Score = 46.4 bits (95), Expect(2) = 5e-049
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -3 / +2
Query: 282 KKKEGKCLEFRLNGDDIEFELF* 214
+KKEGKCLEFR N +D+EFE+F*
Sbjct: 476 RKKEGKCLEFRSNSEDLEFEVF* 544
>gb|CW403690.1|CW403690 fsbb001f095i13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095i13, DNA
sequence
Length = 615
Score = 169 bits (363), Expect(2) = 5e-049
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = -3 / -1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPF+GPGN+ETL+NV+SQ L+FPDNP+VS +A+DLIRGLLVKEPE R GS RGA
Sbjct: 543 LLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAA 364
Query: 396 EIKRHPFFEGLNWALIRWTAPPET 325
EIK+HPFFEGLNWALIR APPET
Sbjct: 363 EIKQHPFFEGLNWALIRSAAPPET 292
Score = 132 bits (282), Expect = 6e-030
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = +2 / +2
Query: 326 VSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFK 505
VSGGA RI+AQF PSKKGC LIS APL++P+ +SGSFTS PLIRS A LT GLSGN +
Sbjct: 293 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 472
Query: 506 PCEITFESVSSLPGPLNGVLP 568
CE TF +VSS PGPL GVLP
Sbjct: 473 FCETTFANVSSFPGPLKGVLP 535
Score = 46.4 bits (95), Expect(2) = 5e-049
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -3 / -1
Query: 282 KKKEGKCLEFRLNGDDIEFELF* 214
+KKEGKCLEFR N +D+EFE+F*
Sbjct: 258 RKKEGKCLEFRSNSEDLEFEVF* 190
>gb|BF422042.1|BF422042 FM1_12_C02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 591
Score = 169 bits (363), Expect(2) = 5e-049
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPF+GPGN+ETL+NV+SQ L+FPDNP+VS +A+DLIRGLLVKEPE R GS RGA
Sbjct: 96 LLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAA 275
Query: 396 EIKRHPFFEGLNWALIRWTAPPET 325
EIK+HPFFEGLNWALIR APPET
Sbjct: 276 EIKQHPFFEGLNWALIRSAAPPET 347
Score = 133 bits (284), Expect = 3e-030
Identities = 57/81 (70%), Positives = 65/81 (80%)
Frame = +2 / -3
Query: 326 VSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFK 505
VSGGA RI+AQF+PSKKGC LIS APL++P+ +SGSFTS PLIRS A LT GLSGN +
Sbjct: 346 VSGGAAERIRAQFKPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 167
Query: 506 PCEITFESVSSLPGPLNGVLP 568
CE TF +VSS PGPL GVLP
Sbjct: 166 FCETTFANVSSFPGPLKGVLP 104
Score = 46.4 bits (95), Expect(2) = 5e-049
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -3 / +3
Query: 282 KKKEGKCLEFRLNGDDIEFELF* 214
+KKEGKCLEFR N +D+EFE+F*
Sbjct: 381 RKKEGKCLEFRSNSEDLEFEVF* 449
>gb|CN147521.1|CN147521 WOUND1_50_F12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_F12_A002 3', mRNA sequence
Length = 763
Score = 166 bits (357), Expect(2) = 3e-048
Identities = 66/84 (78%), Positives = 75/84 (89%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPF+GPGN+ETL+NV+SQ L+FPDNP+VS +A+DLIRGLLVKEPE R GS RG
Sbjct: 186 LLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGVA 365
Query: 396 EIKRHPFFEGLNWALIRWTAPPET 325
EIK+HPFFEGLNWALIR APPET
Sbjct: 366 EIKQHPFFEGLNWALIRSGAPPET 437
Score = 129 bits (276), Expect = 4e-029
Identities = 56/81 (69%), Positives = 63/81 (77%)
Frame = +2 / -1
Query: 326 VSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFK 505
VSGGA RI+AQF PSKKGC LIS PL++P+ +SGSFTS PLIRS A LT GLSGN +
Sbjct: 436 VSGGAPERIRAQFNPSKKGCCLISATPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 257
Query: 506 PCEITFESVSSLPGPLNGVLP 568
CE TF +VSS PGPL GVLP
Sbjct: 256 FCETTFANVSSFPGPLKGVLP 194
Score = 46.4 bits (95), Expect(2) = 3e-048
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -3 / +3
Query: 282 KKKEGKCLEFRLNGDDIEFELF* 214
+KKEGKCLEFR N +D+EFE+F*
Sbjct: 471 RKKEGKCLEFRSNSEDLEFEVF* 539
>gb|CW105164.1|CW105164 104_474_11012772_148_34449_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11012772, DNA
sequence
Length = 593
Score = 149 bits (319), Expect(2) = 5e-043
Identities = 59/76 (77%), Positives = 68/76 (89%)
Frame = -3 / -2
Query: 552 KGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFF 373
+GPGN+ETL+NV+SQ L+FPDNP+VS +A+DLIRGLLVKEPE R GS RGA EIK+HPFF
Sbjct: 592 RGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAAEIKQHPFF 413
Query: 372 EGLNWALIRWTAPPET 325
EGLNWALIR APPET
Sbjct: 412 EGLNWALIRSAAPPET 365
Score = 122 bits (261), Expect = 4e-027
Identities = 53/76 (69%), Positives = 60/76 (78%)
Frame = +2 / +3
Query: 326 VSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFK 505
VSGGA RI+AQF PSKKGC LIS APL++P+ +SGSFTS PLIRS A LT GLSGN +
Sbjct: 366 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 545
Query: 506 PCEITFESVSSLPGPL 553
CE TF +VSS PGPL
Sbjct: 546 FCETTFANVSSFPGPL 593
Score = 46.4 bits (95), Expect(2) = 5e-043
Identities = 17/23 (73%), Positives = 21/23 (91%)
Frame = -3 / -2
Query: 282 KKKEGKCLEFRLNGDDIEFELF* 214
+KKEGKCLEFR N +D+EFE+F*
Sbjct: 331 RKKEGKCLEFRSNSEDLEFEVF* 263
>gb|CW403691.1|CW403691 fsbb001f095i13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f095i13, DNA
sequence
Length = 681
Score = 169 bits (363), Expect = 4e-041
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPF+GPGN+ETL+NV+SQ L+FPDNP+VS +A+DLIRGLLVKEPE R GS RGA
Sbjct: 393 LLYGKTPFRGPGNDETLANVVSQNLRFPDNPSVSSNAKDLIRGLLVKEPENRFGSLRGAA 572
Query: 396 EIKRHPFFEGLNWALIRWTAPPET 325
EIK+HPFFEGLNWALIR APPET
Sbjct: 573 EIKQHPFFEGLNWALIRSAAPPET 644
Score = 132 bits (282), Expect = 6e-030
Identities = 57/81 (70%), Positives = 64/81 (79%)
Frame = +2 / -3
Query: 326 VSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGNFK 505
VSGGA RI+AQF PSKKGC LIS APL++P+ +SGSFTS PLIRS A LT GLSGN +
Sbjct: 643 VSGGAAERIRAQFNPSKKGCCLISAAPLNDPNLFSGSFTSKPLIRSLALLLTDGLSGNRR 464
Query: 506 PCEITFESVSSLPGPLNGVLP 568
CE TF +VSS PGPL GVLP
Sbjct: 463 FCETTFANVSSFPGPLKGVLP 401
>gb|CW365890.1|CW365890 fsbb001f038k04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038k04, DNA
sequence
Length = 678
Score = 153 bits (329), Expect = 2e-036
Identities = 63/94 (67%), Positives = 72/94 (76%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NVI Q L+FP+ P VSF ARDLIR LLVKEP+ RLG RGAT
Sbjct: 278 LLFGKTPFKGTGNRATLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGAT 457
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PPE ++ D P
Sbjct: 458 EIKQHPFFEGVNWALIRCASPPEVPRHFDIEKPP 559
>gb|CW365891.1|CW365891 fsbb001f038k04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038k04, DNA
sequence
Length = 693
Score = 153 bits (329), Expect = 2e-036
Identities = 63/94 (67%), Positives = 72/94 (76%)
Frame = -3 / -2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NVI Q L+FP+ P VSF ARDLIR LLVKEP+ RLG RGAT
Sbjct: 413 LLFGKTPFKGTGNRATLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGAT 234
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PPE ++ D P
Sbjct: 233 EIKQHPFFEGVNWALIRCASPPEVPRHFDIEKPP 132
>gb|CF489387.1|CF489387 POL1_57_F11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_F11_A002 3', mRNA sequence
Length = 712
Score = 153 bits (329), Expect = 2e-036
Identities = 63/94 (67%), Positives = 72/94 (76%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NVI Q L+FP+ P VSF ARDLIR LLVKEP+ RLG RGAT
Sbjct: 140 LLFGKTPFKGTGNRATLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGAT 319
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PPE ++ D P
Sbjct: 320 EIKQHPFFEGVNWALIRCASPPEVPRHFDIEKPP 421
>gb|CW353450.1|CW353450 fsbb001f016d09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f016d09, DNA
sequence
Length = 730
Score = 153 bits (328), Expect = 3e-036
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGAT
Sbjct: 396 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGAT 575
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 576 EIKQHPFFEGVNWALIRCASPPDIPKPVELECRP 677
Score = 110 bits (235), Expect = 2e-023
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2 / -1
Query: 320 FRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGN 499
F +SGG H ++AQF PSKKGC ISVAP PSR GS TS+PLI S A KLT G SGN
Sbjct: 652 FGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGDSGN 473
Query: 500 FKPCEITFESVSSLPGPLNGVLP*SN 577
K T +SV+ LP PLNGVLP +N
Sbjct: 472 LKGWPTTLKSVARLPEPLNGVLPNNN 395
>gb|AW565318.1|AW565318 LG1_342_A06.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 153 bits (328), Expect = 3e-036
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGAT
Sbjct: 66 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGAT 245
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 246 EIKQHPFFEGVNWALIRCASPPDIPKPVELECRP 347
Score = 110 bits (235), Expect = 2e-023
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2 / -2
Query: 320 FRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGN 499
F +SGG H ++AQF PSKKGC ISVAP PSR GS TS+PLI S A KLT G SGN
Sbjct: 322 FGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGDSGN 143
Query: 500 FKPCEITFESVSSLPGPLNGVLP*SN 577
K T +SV+ LP PLNGVLP +N
Sbjct: 142 LKGWPTTLKSVARLPEPLNGVLPNNN 65
>gb|BE594970.1|BE594970 PI1_48_B08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 645
Score = 153 bits (328), Expect = 3e-036
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGAT
Sbjct: 15 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGAT 194
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 195 EIKQHPFFEGVNWALIRCASPPDIPKPVELECRP 296
Score = 110 bits (235), Expect = 2e-023
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2 / -3
Query: 320 FRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGN 499
F +SGG H ++AQF PSKKGC ISVAP PSR GS TS+PLI S A KLT G SGN
Sbjct: 271 FGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGDSGN 92
Query: 500 FKPCEITFESVSSLPGPLNGVLP*SN 577
K T +SV+ LP PLNGVLP +N
Sbjct: 91 LKGWPTTLKSVARLPEPLNGVLPNNN 14
>gb|BE597334.1|BE597334 PI1_72_B09.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 614
Score = 153 bits (328), Expect = 3e-036
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGAT
Sbjct: 67 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGAT 246
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 247 EIKQHPFFEGVNWALIRCASPPDIPKPVELECRP 348
Score = 110 bits (235), Expect = 2e-023
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2 / -1
Query: 320 FRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGN 499
F +SGG H ++AQF PSKKGC ISVAP PSR GS TS+PLI S A KLT G SGN
Sbjct: 323 FGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGDSGN 144
Query: 500 FKPCEITFESVSSLPGPLNGVLP*SN 577
K T +SV+ LP PLNGVLP +N
Sbjct: 143 LKGWPTTLKSVARLPEPLNGVLPNNN 66
>gb|BF705043.1|BF705043 RHIZ2_1_F10.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 639
Score = 153 bits (328), Expect = 3e-036
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGAT
Sbjct: 40 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGAT 219
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 220 EIKQHPFFEGVNWALIRCASPPDIPKPVELECRP 321
Score = 110 bits (235), Expect = 2e-023
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2 / -2
Query: 320 FRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGN 499
F +SGG H ++AQF PSKKGC ISVAP PSR GS TS+PLI S A KLT G SGN
Sbjct: 296 FGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGDSGN 117
Query: 500 FKPCEITFESVSSLPGPLNGVLP*SN 577
K T +SV+ LP PLNGVLP +N
Sbjct: 116 LKGWPTTLKSVARLPEPLNGVLPNNN 39
>gb|BG052508.1|BG052508 RHIZ2_26_A04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 520
Score = 153 bits (328), Expect = 3e-036
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKG GN TL NV+ Q LKFP++P+ S+ +RDLIRGLLVKEP+ RLG RGAT
Sbjct: 2 LLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGAT 181
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNID 310
EIK+HPFFEG+NWALIR + PPE + ++
Sbjct: 182 EIKQHPFFEGVNWALIRCSTPPEVPRPVE 268
>gb|BG103243.1|BG103243 RHIZ2_19_H12.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 691
Score = 153 bits (328), Expect = 3e-036
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKG GN TL NV+ Q LKFP++P+ S+ +RDLIRGLLVKEP+ RLG RGAT
Sbjct: 178 LLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGAT 357
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNID 310
EIK+HPFFEG+NWALIR + PPE + ++
Sbjct: 358 EIKQHPFFEGVNWALIRCSTPPEVPRPVE 444
>gb|CD209113.1|CD209113 HS1_46_A12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_46_A12_A012 3', mRNA sequence
Length = 651
Score = 153 bits (328), Expect = 3e-036
Identities = 60/89 (67%), Positives = 73/89 (82%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKG GN TL NV+ Q LKFP++P+ S+ +RDLIRGLLVKEP+ RLG RGAT
Sbjct: 127 LLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGAT 306
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNID 310
EIK+HPFFEG+NWALIR + PPE + ++
Sbjct: 307 EIKQHPFFEGVNWALIRCSTPPEVPRPVE 393
>gb|CF074385.1|CF074385 FE1_24_H07.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_24_H07_A002 3', mRNA sequence
Length = 635
Score = 153 bits (328), Expect = 3e-036
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGAT
Sbjct: 6 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGAT 185
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 186 EIKQHPFFEGVNWALIRCASPPDIPKPVELECRP 287
Score = 110 bits (235), Expect = 2e-023
Identities = 52/86 (60%), Positives = 59/86 (68%)
Frame = +2 / -2
Query: 320 FRVSGGAVHRIKAQFRPSKKGCRLISVAPLDEPSRYSGSFTSSPLIRSRAWKLTAGLSGN 499
F +SGG H ++AQF PSKKGC ISVAP PSR GS TS+PLI S A KLT G SGN
Sbjct: 262 FGMSGGLAHLMRAQFTPSKKGCCFISVAPRLYPSRCCGSLTSNPLIMSLAEKLTIGDSGN 83
Query: 500 FKPCEITFESVSSLPGPLNGVLP*SN 577
K T +SV+ LP PLNGVLP +N
Sbjct: 82 LKGWPTTLKSVARLPEPLNGVLPNNN 5
>gb|BG357481.1|BG357481 OV2_30_D12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 658
Score = 152 bits (327), Expect = 4e-036
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG T
Sbjct: 14 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTT 193
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 194 EIKQHPFFEGVNWALIRCASPPDVPKPVELDRPP 295
>gb|CN126293.1|CN126293 RHOH1_16_G04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_G04_A002 3', mRNA sequence
Length = 820
Score = 152 bits (327), Expect = 4e-036
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG T
Sbjct: 145 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTT 324
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 325 EIKQHPFFEGVNWALIRCASPPDVPKPVELDRPP 426
>gb|CN134750.1|CN134750 OX1_28_E12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_E12_A002 3', mRNA sequence
Length = 842
Score = 152 bits (327), Expect = 4e-036
Identities = 60/94 (63%), Positives = 74/94 (78%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG T
Sbjct: 346 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTT 525
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PP+ K ++ P
Sbjct: 526 EIKQHPFFEGVNWALIRCASPPDVPKPVELDRPP 627
>gb|CN126382.1|CN126382 RHOH1_16_G04.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_16_G04_A002 5', mRNA sequence
Length = 724
Score = 152 bits (326), Expect = 5e-036
Identities = 59/89 (66%), Positives = 73/89 (82%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG T
Sbjct: 455 LLFGKTPFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTT 634
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNID 310
EIK+HPFFEG+NWALIR +PP+ K ++
Sbjct: 635 EIKQHPFFEGVNWALIRCASPPDVPKPVE 721
>gb|CD427064.1|CD427064 SA1_17_G05.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_17_G05_A002 3', mRNA sequence
Length = 652
Score = 149 bits (321), Expect = 2e-035
Identities = 59/89 (66%), Positives = 72/89 (80%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYGKTPFKG GN TL NV+ Q LKFP++P+ S+ +RD IRGLLVKEP+ RLG RGAT
Sbjct: 12 LLYGKTPFKGSGNRATLFNVVGQQLKFPESPSTSYSSRDPIRGLLVKEPQSRLGVKRGAT 191
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNID 310
EIK+HPFFEG+NWALIR + PPE + ++
Sbjct: 192 EIKQHPFFEGVNWALIRCSTPPEVPRPVE 278
>gb|CF489555.1|CF489555 POL1_58_F10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_58_F10_A002 3', mRNA sequence
Length = 692
Score = 149 bits (320), Expect = 3e-035
Identities = 61/94 (64%), Positives = 71/94 (75%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG G TL NVI Q L+FP+ P VSF ARDLIR LLVK+P+ RLG RGAT
Sbjct: 119 LLFGKTPFKGTGTRATLFNVIGQPLRFPEYPVVSFPARDLIRSLLVKDPQQRLGFKRGAT 298
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+HPFFEG+NWALIR +PPE ++ D P
Sbjct: 299 EIKQHPFFEGVNWALIRCASPPEVPRHFDIEKPP 400
>gb|CX613644.1|CX613644 GABR1_9_H06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_H06_A002 3', mRNA sequence
Length = 508
Score = 149 bits (320), Expect = 3e-035
Identities = 61/93 (65%), Positives = 70/93 (75%)
Frame = -3 / +3
Query: 573 LYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATE 394
L+GKTPFKG GN TL NVI Q L+FP+ P VSF ARDLIR LVKEP+ RLG RGATE
Sbjct: 9 LFGKTPFKGTGNRGTLFNVIGQPLRFPEYPVVSFPARDLIRSFLVKEPQQRLGFKRGATE 188
Query: 393 IKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
IK+HPFFEG+NWALIR +PPE ++ D P
Sbjct: 189 IKQHPFFEGVNWALIRCASPPEVPRHFDIEKPP 287
>gb|AW923900.1|AW923900 WS1_30_E12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 569
Score = 138 bits (296), Expect(2) = 2e-033
Identities = 54/88 (61%), Positives = 68/88 (77%)
Frame = -3 / +2
Query: 558 PFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHP 379
PF+G GN TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG TEIK+HP
Sbjct: 44 PFQGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHP 223
Query: 378 FFEGLNWALIRWTAPPETLKNIDTAPTP 295
FFEG+NWALIR +PP+ K ++ P
Sbjct: 224 FFEGVNWALIRCASPPDVPKPVELDRPP 307
Score = 24.9 bits (48), Expect(2) = 2e-033
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 576 LLYGKTPFKG 547
LL+GKTPF+G
Sbjct: 27 LLFGKTPFRG 56
>gb|CX606300.1|CX606300 ANR1_2_F08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_F08_A002 3', mRNA sequence
Length = 593
Score = 141 bits (302), Expect = 1e-032
Identities = 59/94 (62%), Positives = 68/94 (72%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+GKTPFKG GN TL NVI L+FP+ P VSF ARDLIR LLVKEP+ RLG RG
Sbjct: 140 LLFGKTPFKGTGNRATLFNVIGHPLRFPEYPVVSFPARDLIRSLLVKEPQQRLGFKRGPP 319
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTAPTP 295
EIK+ PFFEG+NWALIR +PPE ++ D P
Sbjct: 320 EIKQPPFFEGVNWALIRCASPPEVPRHFDIENPP 421
>gb|CF485574.1|CF485574 POL1_32_G12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_32_G12_A002 3', mRNA sequence
Length = 563
Score = 140 bits (300), Expect = 2e-032
Identities = 55/88 (62%), Positives = 68/88 (77%)
Frame = -3 / +2
Query: 558 PFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHP 379
PFKG GN TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG TEIK+HP
Sbjct: 2 PFKGSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHP 181
Query: 378 FFEGLNWALIRWTAPPETLKNIDTAPTP 295
FFEG+NWALIR +PP+ K ++ P
Sbjct: 182 FFEGVNWALIRCASPPDVPKPVELDRPP 265
>gb|CW363768.1|CW363768 fsbb001f035i09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035i09, DNA
sequence
Length = 716
Score = 138 bits (296), Expect = 7e-032
Identities = 56/82 (68%), Positives = 64/82 (78%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LL+G TPFKG GN TL NV++Q L+FPD PAVS ARDLIRGLL KEP RL S RGA
Sbjct: 188 LLHGATPFKGSGNRATLFNVVAQPLRFPDAPAVSAAARDLIRGLLAKEPHNRLASRRGAA 367
Query: 396 EIKRHPFFEGLNWALIRWTAPP 331
E+K+HPFFEG+NWAL+R PP
Sbjct: 368 EVKQHPFFEGVNWALVRSAQPP 433
>gb|CW073807.1|CW073807 104_340_10781623_116_31470_103 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10781623, DNA
sequence
Length = 596
Score = 137 bits (294), Expect = 1e-031
Identities = 55/82 (67%), Positives = 64/82 (78%)
Frame = -3 / -3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
L++G TPFKG GN TL NV++Q L+FPD PAVS ARDLIRGLL KEP RL S RGA
Sbjct: 516 LMHGATPFKGSGNRATLFNVVAQPLRFPDAPAVSAAARDLIRGLLAKEPHNRLASRRGAA 337
Query: 396 EIKRHPFFEGLNWALIRWTAPP 331
E+K+HPFFEG+NWAL+R PP
Sbjct: 336 EVKQHPFFEGVNWALVRSAQPP 271
>gb|BF480784.1|BF480784 FM1_14_H09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 569
Score = 137 bits (294), Expect = 1e-031
Identities = 54/87 (62%), Positives = 68/87 (78%)
Frame = -3 / +3
Query: 555 FKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPF 376
FKG GN TL NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGATEIK+HPF
Sbjct: 3 FKGSGNRATLFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPF 182
Query: 375 FEGLNWALIRWTAPPETLKNIDTAPTP 295
FEG+NWALIR +PP+ K ++ P
Sbjct: 183 FEGVNWALIRCASPPDIPKPVELECRP 263
>gb|CW363767.1|CW363767 fsbb001f035i09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f035i09, DNA
sequence
Length = 650
Score = 134 bits (288), Expect = 8e-031
Identities = 54/80 (67%), Positives = 62/80 (77%)
Frame = -3 / -2
Query: 570 YGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEI 391
+G TPFKG GN TL NV++Q L+FPD PAVS ARDLIRGLL KEP RL S RGA E+
Sbjct: 649 HGATPFKGSGNRATLFNVVAQPLRFPDAPAVSAAARDLIRGLLAKEPHNRLASRRGAAEV 470
Query: 390 KRHPFFEGLNWALIRWTAPP 331
K+HPFFEG+NWAL+R PP
Sbjct: 469 KQHPFFEGVNWALVRSAQPP 410
>gb|CD423436.1|CD423436 SA1_23_C04.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_23_C04_A002 3', mRNA sequence
Length = 643
Score = 132 bits (282), Expect = 6e-030
Identities = 52/85 (61%), Positives = 65/85 (76%)
Frame = -3 / +3
Query: 549 GPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFE 370
G GN TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG TEIK+HPFFE
Sbjct: 3 GSGNRATLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHPFFE 182
Query: 369 GLNWALIRWTAPPETLKNIDTAPTP 295
G+NWALIR +PP+ K ++ P
Sbjct: 183 GVNWALIRCASPPDVPKPVELDRPP 257
>gb|CW368244.1|CW368244 fsbb001f042b22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f042b22, DNA
sequence
Length = 403
Score = 132 bits (282), Expect = 6e-030
Identities = 54/91 (59%), Positives = 65/91 (71%)
Frame = -3 / -2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
L+YGK PFKG TL NV+ Q LKFPD P S +RDLI+GLL KEP+ RLG RGA
Sbjct: 399 LMYGKPPFKGQTTRATLFNVVGQQLKFPDCPGTSNASRDLIKGLLAKEPQSRLGVKRGAA 220
Query: 396 EIKRHPFFEGLNWALIRWTAPPETLKNIDTA 304
EIK+HPFFEG+NWALIR + PP + ++ A
Sbjct: 219 EIKQHPFFEGVNWALIRCSTPPGVPRAVEPA 127
>gb|CW223651.1|CW223651 104_659_11203029_148_37186_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11203029, DNA
sequence
Length = 726
Score = 95.0 bits (201), Expect(2) = 8e-028
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = -3 / +1
Query: 486 PAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWALIRWTAPPETLKNIDT 307
PAVS ARDLIRGLLVK+P+ R+ +RGATEIK+HPFFEG+NWAL+R PP +D
Sbjct: 214 PAVSSVARDLIRGLLVKDPQKRIAFTRGATEIKQHPFFEGVNWALVRSMTPPSVPDPVDF 393
Query: 306 APTPVTTRKK 277
KK
Sbjct: 394 RQYGAAKEKK 423
Score = 49.6 bits (102), Expect(2) = 8e-028
Identities = 20/32 (62%), Positives = 23/32 (71%)
Frame = -3 / +1
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPA 481
LL+G TPFKG GN TL NVI Q L+FP + A
Sbjct: 109 LLHGSTPFKGAGNRATLCNVIEQPLRFPSDGA 204
>gb|AW679681.1|AW679681 WS1_30_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 637
Score = 124 bits (266), Expect = 9e-028
Identities = 49/79 (62%), Positives = 62/79 (78%)
Frame = -3 / +3
Query: 531 TLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWAL 352
TL NV+ Q L+FP++P VSF ARDLIRGLLVK+P++RLG RG TEIK+HPFFEG+NWAL
Sbjct: 3 TLFNVVGQPLRFPESPIVSFSARDLIRGLLVKDPQHRLGYKRGTTEIKQHPFFEGVNWAL 182
Query: 351 IRWTAPPETLKNIDTAPTP 295
IR +PP+ K ++ P
Sbjct: 183 IRCASPPDVPKPVELDRPP 239
>gb|CW430454.1|CW430454 fsbb001f144c20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144c20, DNA
sequence
Length = 611
Score = 123 bits (263), Expect = 2e-027
Identities = 48/74 (64%), Positives = 61/74 (82%)
Frame = -3 / +1
Query: 531 TLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWAL 352
TL NV+ Q LKFP++P+ S+ +RDLIRGLLVKEP+ RLG RGATEIK+HPFFEG+NWAL
Sbjct: 1 TLFNVVGQQLKFPESPSTSYSSRDLIRGLLVKEPQSRLGVKRGATEIKQHPFFEGVNWAL 180
Query: 351 IRWTAPPETLKNID 310
IR + PPE + ++
Sbjct: 181 IRCSTPPEVPRPVE 222
>gb|BG053517.1|BG053517 RHIZ2_10_B08.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 515
Score = 122 bits (262), Expect = 3e-027
Identities = 48/78 (61%), Positives = 62/78 (79%)
Frame = -3 / +2
Query: 528 LSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWALI 349
L NV+ Q L+FP++P VSF ARD+IRGLLVK+P++RLG RGATEIK+HPFFEG+NWALI
Sbjct: 2 LFNVVGQPLRFPESPIVSFSARDMIRGLLVKDPQHRLGYKRGATEIKQHPFFEGVNWALI 181
Query: 348 RWTAPPETLKNIDTAPTP 295
R +PP+ K ++ P
Sbjct: 182 RCASPPDIPKPVELECRP 235
>gb|CW308233.1|CW308233 104_796_11468560_116_35731_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11468560, DNA
sequence
Length = 613
Score = 118 bits (253), Expect = 6e-026
Identities = 48/82 (58%), Positives = 61/82 (74%)
Frame = -3 / -3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
LLYG TPFKG E TL+N++++ L+FP +PAVS ARDL+ LL K+P RLG++ GA
Sbjct: 431 LLYGVTPFKGYDIEMTLANIVARALEFPRDPAVSSAARDLVTALLAKDPARRLGATVGAA 252
Query: 396 EIKRHPFFEGLNWALIRWTAPP 331
IKRHPFF G+NWAL+R PP
Sbjct: 251 AIKRHPFFGGVNWALLRCATPP 186
>gb|CW492772.1|CW492772 fsbb001f283d16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f283d16, DNA
sequence
Length = 441
Score = 109 bits (232), Expect = 4e-023
Identities = 44/73 (60%), Positives = 54/73 (73%)
Frame = -3 / -2
Query: 522 NVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGATEIKRHPFFEGLNWALIRW 343
NV+ Q LKFPD P S +RDLI+GLL KEP+ RLG RGA EIK+HPFFEG+NWALIR
Sbjct: 440 NVVGQQLKFPDCPGTSNASRDLIKGLLAKEPQSRLGVKRGAAEIKQHPFFEGVNWALIRC 261
Query: 342 TAPPETLKNIDTA 304
+ PP + ++ A
Sbjct: 260 STPPGVPRAVEPA 222
>gb|AW671681.1|AW671681 LG1_349_E04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 518
Score = 106 bits (227), Expect = 2e-022
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3 / -3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG TPF+G + T +N++ + ++FP + VS AR LI LL ++P RLGS GA
Sbjct: 468 MLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAI 289
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF G+NWAL+R PPE
Sbjct: 288 EIKQHPFFRGINWALVRAATPPE 220
>gb|BE596005.1|BE596005 PI1_51_B03.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 106 bits (227), Expect = 2e-022
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG TPF+G + T +N++ + ++FP + VS AR LI LL ++P RLGS GA
Sbjct: 176 MLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAI 355
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF G+NWAL+R PPE
Sbjct: 356 EIKQHPFFRGINWALVRAATPPE 424
>gb|BM329226.1|BM329226 PIC1_35_A07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 553
Score = 106 bits (227), Expect = 2e-022
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG TPF+G + T +N++ + ++FP + VS AR LI LL ++P RLGS GA
Sbjct: 53 MLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAI 232
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF G+NWAL+R PPE
Sbjct: 233 EIKQHPFFRGINWALVRAATPPE 301
>gb|BM329541.1|BM329541 PIC1_39_D08.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 657
Score = 106 bits (227), Expect = 2e-022
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG TPF+G + T +N++ + ++FP + VS AR LI LL ++P RLGS GA
Sbjct: 153 MLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAI 332
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF G+NWAL+R PPE
Sbjct: 333 EIKQHPFFRGINWALVRAATPPE 401
>gb|BM329963.1|BM329963 PIC1_45_E03.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 531
Score = 106 bits (227), Expect = 2e-022
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3 / +2
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG TPF+G + T +N++ + ++FP + VS AR LI LL ++P RLGS GA
Sbjct: 8 MLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAI 187
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF G+NWAL+R PPE
Sbjct: 188 EIKQHPFFRGINWALVRAATPPE 256
>gb|BM330114.1|BM330114 PIC1_47_C12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 606
Score = 106 bits (227), Expect = 2e-022
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG TPF+G + T +N++ + ++FP + VS AR LI LL ++P RLGS GA
Sbjct: 102 MLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAI 281
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF G+NWAL+R PPE
Sbjct: 282 EIKQHPFFRGINWALVRAATPPE 350
>gb|BM331672.1|BM331672 PIC1_59_C05.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 558
Score = 106 bits (227), Expect = 2e-022
Identities = 42/83 (50%), Positives = 57/83 (68%)
Frame = -3 / +3
Query: 576 LLYGKTPFKGPGNEETLSNVISQGLKFPDNPAVSFHARDLIRGLLVKEPEYRLGSSRGAT 397
+LYG TPF+G + T +N++ + ++FP + VS AR LI LL ++P RLGS GA
Sbjct: 54 MLYGYTPFRGKTRQRTFANILHKDIRFPASIQVSLAARQLIYRLLHRDPANRLGSYEGAI 233
Query: 396 EIKRHPFFEGLNWALIRWTAPPE 328
EIK+HPFF G+NWAL+R PPE
Sbjct: 234 EIKQHPFFRGINWALVRAATPPE 302
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 632,018,885
Number of Sequences: 832831
Number of extensions: 8378627
Number of successful extensions: 83877
Number of sequences better than 1.0e-020: 53
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 16630865307
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)