TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2623104.2.4
(1628 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorgh... 523 e-147
gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum b... 435 e-143
gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorgh... 339 e-142
gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum b... 337 e-137
gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum b... 228 e-136
gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum b... 287 e-135
gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorgh... 478 e-134
gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum b... 287 e-133
gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorgh... 273 e-131
gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorgh... 350 e-129
gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorgh... 331 e-128
gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorgh... 290 e-127
gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorgh... 411 e-127
gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum b... 261 e-127
gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum b... 259 e-126
gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum b... 259 e-126
gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum b... 279 e-126
gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum b... 215 e-125
gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum b... 179 e-124
gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum b... 243 e-122
gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum b... 248 e-121
gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum b... 237 e-120
gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorgh... 419 e-116
gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorgh... 414 e-114
gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorgh... 215 e-113
gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation... 211 e-112
gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum b... 245 e-111
gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum b... 336 e-110
gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) So... 397 e-109
gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methy... 394 e-108
gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum b... 393 e-108
gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum b... 189 e-106
gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum b... 381 e-104
gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum b... 377 e-103
gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum b... 189 e-103
gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum b... 373 e-102
gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorgh... 266 1e-099
gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorgh... 337 2e-098
gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum b... 187 9e-098
gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sor... 355 3e-097
gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) So... 354 2e-096
gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum b... 189 4e-096
gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum b... 350 3e-095
gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorgh... 349 8e-095
gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum b... 348 1e-094
gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorgh... 278 3e-093
gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sor... 339 6e-092
gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum b... 171 8e-091
gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorgh... 225 2e-089
gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-dig... 331 2e-089
gb|CW333143.1|CW333143 104_831_11481784_148_36046_064 Sorgh... 259 2e-088
gb|CF480188.1|CF480188 POL1_64_G01.b1_A002 Pollen Sorghum b... 303 4e-088
gb|CL165002.1|CL165002 104_359_10808294_114_31816_278 Sorgh... 325 1e-087
gb|CW258561.1|CW258561 104_724_11227944_148_35167_088 Sorgh... 271 1e-087
gb|CF484989.1|CF484989 POL1_28_F08.g1_A002 Pollen Sorghum b... 189 3e-087
gb|CF490094.1|CF490094 POL1_62_A05.g1_A002 Pollen Sorghum b... 254 4e-083
gb|CW182308.1|CW182308 104_597_11164002_116_36658_067 Sorgh... 310 4e-083
gb|CF486235.1|CF486235 POL1_36_C04.g1_A002 Pollen Sorghum b... 189 2e-082
gb|CF490015.1|CF490015 POL1_62_A05.b1_A002 Pollen Sorghum b... 177 3e-082
gb|CL187601.1|CL187601 104_403_10901000_114_32460_026 Sorgh... 271 5e-080
gb|CW446664.1|CW446664 fsbb001f179g22f0 Sorghum methylation... 288 7e-079
gb|CF481701.1|CF481701 POL1_73_B09.g1_A002 Pollen Sorghum b... 189 3e-078
gb|CW330183.1|CW330183 104_827_11480239_116_36007_032 Sorgh... 293 5e-078
gb|CF480656.1|CF480656 POL1_67_D01.b1_A002 Pollen Sorghum b... 183 3e-076
gb|CF486155.1|CF486155 POL1_36_C04.b1_A002 Pollen Sorghum b... 279 7e-074
gb|CF485486.1|CF485486 POL1_31_G04.g1_A002 Pollen Sorghum b... 189 5e-073
gb|CF480280.1|CF480280 POL1_64_G01.g1_A002 Pollen Sorghum b... 142 1e-072
gb|CL197000.1|CL197000 104_423_10943444_116_32330_070 Sorgh... 272 1e-071
gb|CW406843.1|CW406843 fsbb001f100a22k0 Sorghum methylation... 165 2e-071
gb|BG239833.1|BG239833 OV1_29_F03.g1_A002 Ovary 1 (OV1) Sor... 266 7e-070
gb|BG240402.1|BG240402 OV1_29_F03.b1_A002 Ovary 1 (OV1) Sor... 266 7e-070
gb|CW217188.1|CW217188 104_650_11195523_116_37129_010 Sorgh... 150 2e-069
gb|CF483278.1|CF483278 POL1_21_D07.b1_A002 Pollen Sorghum b... 163 1e-068
gb|CW494638.1|CW494638 fsbb001f286a15k0 Sorghum methylation... 201 3e-068
gb|CF485402.1|CF485402 POL1_31_G04.b1_A002 Pollen Sorghum b... 232 6e-065
gb|CF484792.1|CF484792 POL1_27_B10.g1_A002 Pollen Sorghum b... 150 3e-061
gb|CW043621.1|CW043621 104_279_10508479_114_30273 Sorghum m... 237 4e-061
gb|CF481307.1|CF481307 POL1_71_E06.b1_A002 Pollen Sorghum b... 232 2e-059
gb|CF489359.1|CF489359 POL1_57_D04.b1_A002 Pollen Sorghum b... 232 2e-059
gb|CF480663.1|CF480663 POL1_67_D09.b1_A002 Pollen Sorghum b... 230 2e-059
gb|CF481619.1|CF481619 POL1_73_B09.b1_A002 Pollen Sorghum b... 229 4e-059
gb|CF487982.1|CF487982 POL1_47_C02.b1_A002 Pollen Sorghum b... 230 6e-059
gb|CF488593.1|CF488593 POL1_51_A10.b1_A002 Pollen Sorghum b... 230 6e-059
gb|CF481975.1|CF481975 POL1_75_D02.g1_A002 Pollen Sorghum b... 189 2e-058
gb|CF481930.1|CF481930 POL1_75_E11.b1_A002 Pollen Sorghum b... 224 9e-058
gb|CF489851.1|CF489851 POL1_61_B02.b1_A002 Pollen Sorghum b... 221 3e-056
gb|CF481916.1|CF481916 POL1_75_D02.b1_A002 Pollen Sorghum b... 216 6e-055
gb|CF489718.1|CF489718 POL1_59_F04.b1_A002 Pollen Sorghum b... 160 8e-055
gb|BG739374.1|BG739374 EM1_82_B09.g1_A002 Embryo 1 (EM1) So... 127 5e-053
gb|CW197885.1|CW197885 104_622_11181920_148_36831_026 Sorgh... 210 7e-053
gb|CF482926.1|CF482926 POL1_10_C07.b1_A002 Pollen Sorghum b... 194 2e-052
gb|CF486365.1|CF486365 POL1_37_F12.b1_A002 Pollen Sorghum b... 197 3e-052
gb|CW463314.1|CW463314 fsbb001f211n16f0 Sorghum methylation... 138 2e-051
gb|BG323126.1|BG323126 EM1_15_B11.g1_A002 Embryo 1 (EM1) So... 202 2e-050
gb|BG739541.1|BG739541 EM1_82_B09.b1_A002 Embryo 1 (EM1) So... 158 2e-050
gb|CL165003.1|CL165003 104_359_10808294_116_31817_278 Sorgh... 168 3e-050
gb|CW097817.1|CW097817 104_464_11002670_148_34365_061 Sorgh... 200 5e-050
gb|CW245686.1|CW245686 104_706_11221077_148_35074_085 Sorgh... 200 5e-050
gb|CW245687.1|CW245687 104_706_11221077_148_37594_085 Sorgh... 200 5e-050
gb|BZ422208.1|BZ422208 id51a01.b1 WGS-SbicolorF (DH5a methy... 199 1e-049
gb|BZ422085.1|BZ422085 id49d07.b1 WGS-SbicolorF (DH5a methy... 198 2e-049
gb|CW237483.1|CW237483 104_693_11216193_148_37517_033 Sorgh... 196 9e-049
gb|CF481266.1|CF481266 POL1_71_A04.b1_A002 Pollen Sorghum b... 145 7e-048
gb|CW390139.1|CW390139 fsbb001f075k21k0 Sorghum methylation... 192 1e-047
gb|CL196651.1|CL196651 104_423_10943198_116_32330_063 Sorgh... 190 6e-047
gb|CW039367.1|CW039367 104_272_10505460_115_30390 Sorghum m... 187 5e-046
gb|CW333142.1|CW333142 104_831_11481784_116_36045_064 Sorgh... 127 9e-045
gb|CL149388.1|CL149388 104_330_10777794_116_31354_114 Sorgh... 108 4e-042
gb|CW346939.1|CW346939 fsbb001f006k08f0 Sorghum methylation... 108 4e-042
gb|CW299046.1|CW299046 104_781_11462903_116_35658_082 Sorgh... 108 4e-042
gb|CW406842.1|CW406842 fsbb001f100a22f0 Sorghum methylation... 108 2e-041
gb|CW299047.1|CW299047 104_781_11462903_148_35654_082 Sorgh... 108 4e-041
gb|CW260257.1|CW260257 104_726_11228865_148_35188_033 Sorgh... 158 6e-041
gb|CW401940.1|CW401940 fsbb001f093a03f0 Sorghum methylation... 84 7e-041
gb|CL196650.1|CL196650 104_423_10943198_114_32326_063 Sorgh... 153 7e-041
gb|CF481922.1|CF481922 POL1_75_D09.b1_A002 Pollen Sorghum b... 166 6e-040
gb|CF482113.1|CF482113 POL1_76_F02.g1_A002 Pollen Sorghum b... 91 1e-039
gb|CW217189.1|CW217189 104_650_11195523_148_37130_010 Sorgh... 151 3e-039
gb|CW241737.1|CW241737 104_701_11218937_116_37555_079 Sorgh... 164 3e-039
gb|BI098442.1|BI098442 IP1_32_D12.b1_A002 Immature pannicle... 137 3e-038
gb|CL191437.1|CL191437 104_410_10906802_116_32537_007 Sorgh... 140 1e-037
gb|CW323365.1|CW323365 104_817_11476592_116_35962_024 Sorgh... 150 2e-036
gb|CW036659.1|CW036659 104_268_10503899_114_30381 Sorghum m... 154 3e-036
gb|BG240550.1|BG240550 OV1_31_D01.b1_A002 Ovary 1 (OV1) Sor... 152 2e-035
gb|CW194908.1|CW194908 104_618_11180352_148_36800_092 Sorgh... 121 3e-035
gb|CW145709.1|CW145709 104_538_11138608_148_34981_058 Sorgh... 121 2e-034
gb|CW320260.1|CW320260 104_813_11474922_116_35901_077 Sorgh... 101 3e-034
gb|CD213604.1|CD213604 HS1_52_B12.b1_A012 Heat-shocked seed... 89 1e-033
gb|CD462003.1|CD462003 SA1_36_H06.b1_A002 Salicylic acid-tr... 89 1e-033
gb|BE597262.1|BE597262 PI1_70_B02.g1_A002 Pathogen induced ... 89 1e-033
gb|CW181409.1|CW181409 104_596_11163492_116_36654_042 Sorgh... 126 2e-033
gb|CW231979.1|CW231979 104_681_11211414_148_37350_023 Sorgh... 121 5e-033
gb|CW102281.1|CW102281 104_470_11011256_148_34413_024 Sorgh... 144 5e-033
gb|CW346940.1|CW346940 fsbb001f006k08k0 Sorghum methylation... 108 1e-032
gb|CW461512.1|CW461512 fsbb001f209d11f0 Sorghum methylation... 108 2e-031
gb|CW369343.1|CW369343 fsbb001f043l11k0 Sorghum methylation... 138 2e-031
gb|CW070897.1|CW070897 104_323_10591301_114_30471 Sorghum m... 85 3e-031
gb|CW264408.1|CW264408 104_733_11231276_116_35256_078 Sorgh... 116 3e-031
gb|CW320261.1|CW320261 104_813_11474922_148_35897_077 Sorgh... 79 4e-031
gb|CL175908.1|CL175908 104_381_10892772_148_31764_372 Sorgh... 76 2e-030
gb|CW191731.1|CW191731 104_613_11178652_148_36941_002 Sorgh... 76 2e-030
gb|CW279013.1|CW279013 104_753_11406855_116_35427_054 Sorgh... 100 9e-030
gb|CW279015.1|CW279015 104_753_11406856_116_35428_054 Sorgh... 100 9e-030
gb|CW215045.1|CW215045 104_647_11194336_148_37163_060 Sorgh... 132 1e-029
gb|CW086368.1|CW086368 104_430_10946932_116_33018_012 Sorgh... 86 2e-029
gb|BI098131.1|BI098131 IP1_32_D12.g1_A002 Immature pannicle... 89 3e-029
gb|CL175907.1|CL175907 104_381_10892772_116_31765_372 Sorgh... 70 7e-029
gb|CW231978.1|CW231978 104_681_11211414_116_37346_023 Sorgh... 100 7e-029
gb|CW030834.1|CW030834 104_259_10500452_116_30398 Sorghum m... 87 5e-028
gb|CF480287.1|CF480287 POL1_64_G08.g1_A002 Pollen Sorghum b... 80 4e-027
gb|CW327366.1|CW327366 104_823_11478707_148_35980_048 Sorgh... 124 4e-027
gb|CD212571.1|CD212571 HS1_6_F12.b1_A012 Heat-shocked seedl... 89 8e-026
gb|CF488327.1|CF488327 POL1_49_E07.b1_A002 Pollen Sorghum b... 117 4e-025
gb|CW032166.1|CW032166 104_261_10501225_114_30363 Sorghum m... 116 1e-024
gb|CW473599.1|CW473599 fsbb001f229a17k0 Sorghum methylation... 70 3e-024
gb|CW346335.1|CW346335 104_849_11488970_116_36220_003 Sorgh... 114 3e-024
gb|CW394746.1|CW394746 fsbb001f082h21k0 Sorghum methylation... 114 3e-024
gb|CW208653.1|CW208653 104_638_11188789_148_36982_059 Sorgh... 114 5e-024
gb|CW233309.1|CW233309 104_686_11213332_148_37371_008 Sorgh... 114 5e-024
gb|CF430289.1|CF430289 PH1_27_G01.b1_A002 Phosphorous-defic... 64 5e-024
gb|CW072348.1|CW072348 104_325_10592218_114_30536 Sorghum m... 72 7e-024
gb|CW181410.1|CW181410 104_596_11163492_148_36653_042 Sorgh... 69 8e-024
gb|CW133225.1|CW133225 104_516_11116645_116_34806_049 Sorgh... 103 9e-024
gb|CW232350.1|CW232350 104_685_11212772_116_37364_080 Sorgh... 89 4e-022
gb|CF488802.1|CF488802 POL1_52_G02.b1_A002 Pollen Sorghum b... 104 7e-022
gb|CF481907.1|CF481907 POL1_75_C02.b1_A002 Pollen Sorghum b... 106 7e-022
gb|CW194907.1|CW194907 104_618_11180352_116_36796_092 Sorgh... 76 1e-021
gb|BG355623.1|BG355623 EM1_16_B04.g1_A002 Embryo 1 (EM1) So... 105 2e-021
gb|CW191730.1|CW191730 104_613_11178652_116_36942_002 Sorgh... 76 9e-021
>gb|CW271205.1|CW271205 104_743_11402872_116_35341_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402872, DNA
sequence
Length = 709
Score = 523 bits (1137), Expect = e-147
Identities = 209/235 (88%), Positives = 227/235 (96%)
Frame = +2 / +3
Query: 422 LVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVTLLNSKFFHMNM 601
LVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+TLLN+KFFHMN+
Sbjct: 3 LVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGITLLNAKFFHMNV 182
Query: 602 YRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITG 781
++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISIGPGT+KVNITG
Sbjct: 183 FQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITG 362
Query: 782 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 961
VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAASVLT SKIHYE
Sbjct: 363 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 542
Query: 962 NIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLC 1126
NIKMEDS+NPI IDMKYCPNK+CTA+GASKVT +DV+FKN+TGTS++PEAVSLLC
Sbjct: 543 NIKMEDSSNPIIIDMKYCPNKICTASGASKVTRQDVSFKNVTGTSASPEAVSLLC 707
Score = 448 bits (972), Expect = e-124
Identities = 197/235 (83%), Positives = 203/235 (86%)
Frame = -3 / -1
Query: 1125 QSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WIL 946
QSRLTASG+ EVPV FLK TS VTLEAPLAV LLGQYFMSM MG ESSIL+FS*WIL
Sbjct: 706 QSRLTASGLAEVPVTFLKETS*RVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WIL 527
Query: 945 ETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFT 766
E VSTEAASSYAL+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFT
Sbjct: 526 EAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFT 347
Query: 765 LEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWK 586
L VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWK
Sbjct: 346 LVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWK 167
Query: 585 NLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTR 421
NL SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TR
Sbjct: 166 NLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITR 2
Score = 167 bits (359), Expect(3) = 5e-063
Identities = 69/88 (78%), Positives = 73/88 (82%)
Frame = +1 / +2
Query: 421 PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHAAQLQVLPHEH 600
PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HAA+ QVLPHE
Sbjct: 2 PGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHAAKRQVLPHER 181
Query: 601 VPVQGHADQGRDRDGARGQPQHGWHPHG 684
VPVQGH D G D GARGQPQHG HPHG
Sbjct: 182 VPVQGHVD*GCDGHGARGQPQHGRHPHG 265
Score = 131 bits (281), Expect(4) = 4e-041
Identities = 56/83 (67%), Positives = 62/83 (74%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 251 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 72
Query: 490 XXXXXAPHGWALPVKVSLAGDDQ 422
APHG ALPV++ LAGD Q
Sbjct: 71 GARVLAPHGGALPVELPLAGDHQ 3
Score = 91.8 bits (194), Expect(3) = 5e-063
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +2
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 464 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 604
Score = 38.2 bits (77), Expect(4) = 4e-041
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 276 RTSRPCGCRPCWG 238
Score = 37.3 bits (75), Expect(4) = 4e-041
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 518 EHGGGVLVRLDPEAVARLLQRTV 450
Score = 26.7 bits (52), Expect(4) = 4e-041
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 603 C*GSTSCR**WG 568
Score = 24.0 bits (46), Expect(3) = 5e-063
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 338 DNQGEHHRRHM 370
>gb|CF480740.1|CF480740 POL1_67_D01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D01_A002 5', mRNA sequence
Length = 692
Score = 435 bits (945), Expect(2) = e-143
Identities = 174/190 (91%), Positives = 184/190 (96%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 122 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 301
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 302 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 481
Query: 749 GPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAA 928
GPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAA
Sbjct: 482 GPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAA 661
Query: 929 SVLTVSKIHY 958
SVLT SKIHY
Sbjct: 662 SVLTASKIHY 691
Score = 382 bits (828), Expect(2) = e-125
Identities = 164/190 (86%), Positives = 168/190 (88%)
Frame = -3 / -3
Query: 957 *WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTP 778
*WILE VSTEAASSYAL+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTP
Sbjct: 690 *WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTP 511
Query: 777 VMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYM 598
VMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH
Sbjct: 510 VMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNT 331
Query: 597 FMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRL 418
FMWKNL SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRL
Sbjct: 330 FMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRL 151
Query: 417 STRRISIQLP 388
STRRISIQLP
Sbjct: 150 STRRISIQLP 121
Score = 176 bits (379), Expect(4) = 7e-076
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 124 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 303
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 304 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 417
Score = 153 bits (328), Expect(4) = 2e-065
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -2
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 403 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 224
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 223 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 113
Score = 95.0 bits (201), Expect(2) = e-143
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +2 / +2
Query: 263 LIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
LIPKGD+LVG LNFTGPCKGDVTIQVDGNLLATTDLSQYK
Sbjct: 2 LIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQYK 121
Score = 91.8 bits (194), Expect(4) = 7e-076
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 262 PHTQGRLPCRTTQLHRPLQGRRDHPGGWQSAGDHGPKPVQG 384
PH GRLP RTTQLHRP+QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 1 PHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGPEPVQG 123
Score = 89.5 bits (189), Expect(2) = e-125
Identities = 38/46 (82%), Positives = 39/46 (84%)
Frame = -3 / -3
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMR 262
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMR
Sbjct: 138 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMR 1
Score = 87.7 bits (185), Expect(4) = 2e-065
Identities = 32/37 (86%), Positives = 33/37 (89%)
Frame = -1 / -1
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRP 273
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP
Sbjct: 122 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP 12
Score = 75.3 bits (158), Expect(3) = 1e-028
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 117 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 251
Score = 72.5 bits (152), Expect(3) = 1e-028
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = +3 / +3
Query: 273 RATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 12 RATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 122
Score = 52.4 bits (108), Expect(4) = 7e-076
Identities = 21/25 (84%), Positives = 22/25 (88%)
Frame = +1 / +1
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPL 957
ED+ R P QGVRGRRLRAHRLQDPL
Sbjct: 616 EDEQRPPDQGVRGRRLRAHRLQDPL 690
Score = 38.2 bits (77), Expect(4) = 2e-065
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 428 RTSRPCGCRPCWG 390
Score = 37.3 bits (75), Expect(4) = 2e-065
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 670 EHGGGVLVRLDPEAVARLLQRTV 602
Score = 24.4 bits (47), Expect(3) = 1e-028
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1 / +1
Query: 898 RPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRH 1005
R H+ R RRL HR +D E+ + H+H
Sbjct: 439 REHRHRRRRRLHLHRPRDNQGEHHRRHMRPRPWHQH 546
Score = 24.0 bits (46), Expect(4) = 7e-076
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 490 DNQGEHHRRHM 522
>gb|CW309832.1|CW309832 104_798_11469399_116_35733_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 701
Score = 339 bits (735), Expect(2) = e-142
Identities = 133/145 (91%), Positives = 142/145 (97%)
Frame = +2 / +1
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 265 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 444
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 445 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 624
Query: 749 GPGTSKVNITGVTCGPGHGISIGSL 823
GPGT+KVNITGVTCGPGHGISIGSL
Sbjct: 625 GPGTTKVNITGVTCGPGHGISIGSL 699
Score = 299 bits (647), Expect(2) = e-129
Identities = 127/146 (86%), Positives = 129/146 (88%)
Frame = -3 / -1
Query: 825 PRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPG 646
PRLPMLMP PGP VTPVMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPG
Sbjct: 701 PRLPMLMPCPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPG 522
Query: 645 AVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHT 466
AVTVTSLI+MSLH FMWKNL SSV PDTSPLFT S TSELGRILQSYFL EFLLHT
Sbjct: 521 AVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHT 342
Query: 465 AGPCPSRFPLPVMTRLSTRRISIQLP 388
AGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 341 AGPCPSSFPLPVITRLSTRRISIQLP 264
Score = 189 bits (407), Expect(2) = e-142
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 16 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 195
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 196 CKGDVTIQVDGNLLATTDLSQYK 264
Score = 186 bits (401), Expect(2) = e-129
Identities = 76/89 (85%), Positives = 78/89 (87%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 281 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 102
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDA 133
SCTAFVLS LP PEAPNL+MS DPPGPDA
Sbjct: 101 SCTAFVLSFLPSPEAPNLLMSNDPPGPDA 15
Score = 176 bits (379), Expect(3) = 1e-088
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +3
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 267 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 446
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 447 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 560
Score = 168 bits (362), Expect(3) = 1e-088
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 18 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 197
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 198 QGRRDHPGGRQSAGDHGPEPVQG 266
Score = 153 bits (328), Expect(3) = 3e-079
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 546 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 367
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 366 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 256
Score = 146 bits (313), Expect(3) = 3e-079
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 270 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 91
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 90 LRAVLLAVAGGAQLADVERPARPGR 16
Score = 132 bits (283), Expect(3) = 2e-038
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 265 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 86
Query: 203 CCLS 192
CC S
Sbjct: 85 CCPS 74
Score = 75.3 bits (158), Expect(3) = 3e-037
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 260 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 394
Score = 74.4 bits (156), Expect(3) = 3e-037
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 140 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 265
Score = 46.4 bits (95), Expect(3) = 3e-037
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 2 AMRKRRPGLAGRSTSASWAPPATARRT 82
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 394 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 266
Score = 38.2 bits (77), Expect(3) = 3e-079
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 571 RTSRPCGCRPCWG 533
Score = 27.2 bits (53), Expect(3) = 2e-038
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 484 TGTRSCGRTW 455
Score = 24.0 bits (46), Expect(3) = 1e-088
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 633 DNQGEHHRRHM 665
>gb|CF489422.1|CF489422 POL1_57_B05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 5', mRNA sequence
Length = 715
Score = 337 bits (731), Expect(3) = e-137
Identities = 132/144 (91%), Positives = 141/144 (97%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 284 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 463
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 464 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 643
Query: 749 GPGTSKVNITGVTCGPGHGISIGS 820
GPGT+KVNITGVTCGPGHGISIGS
Sbjct: 644 GPGTTKVNITGVTCGPGHGISIGS 715
Score = 299 bits (648), Expect(3) = e-127
Identities = 126/144 (87%), Positives = 128/144 (88%)
Frame = -3 / -2
Query: 819 LPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAV 640
LPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAV
Sbjct: 714 LPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAV 535
Query: 639 TVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAG 460
TVTSLI+MSLH FMWKNL SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAG
Sbjct: 534 TVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAG 355
Query: 459 PCPSRFPLPVMTRLSTRRISIQLP 388
PCPS FPLPV+TRLSTRRISIQLP
Sbjct: 354 PCPSSFPLPVITRLSTRRISIQLP 283
Score = 176 bits (379), Expect(4) = 2e-087
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 286 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 465
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 466 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 579
Score = 153 bits (328), Expect(4) = 4e-082
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 565 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 386
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 385 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 275
Score = 146 bits (313), Expect(3) = e-137
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = +2 / +2
Query: 197 DSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQ 376
DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGPCKGDVTIQVDGNLLATTDLSQ
Sbjct: 98 DSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQ 277
Query: 377 YK 382
YK
Sbjct: 278 YK 283
Score = 143 bits (307), Expect(3) = e-127
Identities = 59/68 (86%), Positives = 60/68 (88%)
Frame = -3 / -2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 300 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 121
Query: 219 SCTAFVLS 196
SCTAFVLS
Sbjct: 120 SCTAFVLS 97
Score = 136 bits (291), Expect(4) = 2e-087
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +1 / +1
Query: 199 QHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPLQGRRDHPGGWQSAGDHGPKPV 378
QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+QGRRDHPGG QSAGDHGP+PV
Sbjct: 100 QHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGPEPV 279
Query: 379 QG 384
QG
Sbjct: 280 QG 285
Score = 132 bits (283), Expect(4) = 4e-082
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 284 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 105
Query: 203 CCLS 192
CC S
Sbjct: 104 CCPS 93
Score = 114 bits (243), Expect(3) = 6e-033
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = -2 / -1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 289 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 110
Query: 208 LRAVCLAIAGGAQLGDVEGPTR 143
LRAV ++ G + + EG R
Sbjct: 109 LRAVLPSMRGADERQEEEGSHR 44
Score = 75.3 bits (158), Expect(4) = 3e-032
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 279 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 413
Score = 74.4 bits (156), Expect(4) = 3e-032
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 159 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 284
Score = 54.7 bits (113), Expect(3) = e-127
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = -1 / -3
Query: 119 PLTLPSHHARCRRGPGGTRLSSHCLCTP 36
P PS HAR RR PGG RLSSHCLCTP
Sbjct: 110 PSCCPSQHARRRRTPGGRRLSSHCLCTP 27
Score = 46.9 bits (96), Expect(3) = e-137
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = +1 / +1
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGRVKG 120
+ ++GVH+QCDESL+PPG L RA EG+ +G
Sbjct: 16 TNKNGVHRQCDESLLPPGVRLRRACWEGQHEG 111
Score = 46.4 bits (95), Expect(4) = 2e-087
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2 / +2
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKEESKGI 124
KMACT NAMRA FLL C H K+ +K +
Sbjct: 23 KMACTGNAMRAFFLLAFVCAAHAGKDSTKAV 115
Score = 41.8 bits (85), Expect(4) = 4e-082
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 97 LPSMRGADERQEEEGSHRIACARH 26
Score = 40.0 bits (81), Expect(3) = 6e-033
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 413 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 285
Score = 38.2 bits (77), Expect(4) = 4e-082
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 590 RTSRPCGCRPCWG 552
Score = 29.5 bits (58), Expect(4) = 3e-032
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3 / +3
Query: 33 RWRAQTMR*EPCXXXXXXXXCMVRRKSQRASMR 131
+WRAQ MR*EP M+ R ++R R
Sbjct: 24 KWRAQAMR*EPSSSWRSSAPRMLGRTARRLCRR 122
Score = 27.2 bits (53), Expect(3) = 6e-033
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 503 TGTRSCGRTW 474
Score = 24.4 bits (47), Expect(4) = 3e-032
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1 / +1
Query: 898 RPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRH 1005
R H+ R RRL HR +D E+ + H+H
Sbjct: 601 REHRHRRRRRLHLHRPRDNQGEHHRRHMRPRPWHQH 708
Score = 24.0 bits (46), Expect(4) = 2e-087
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 652 DNQGEHHRRHM 684
>gb|CF482996.1|CF482996 POL1_10_C07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_10_C07_A002 5', mRNA sequence
Length = 768
Score = 228 bits (493), Expect(4) = e-136
Identities = 89/99 (89%), Positives = 98/99 (98%)
Frame = +2 / +3
Query: 518 NSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSG 697
NSLV+D+VNNGEVSG+TLLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG
Sbjct: 471 NSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSG 650
Query: 698 ITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISI 814
+TI NTVIGVGDDCISIGPGT+KVNITGVTCGPGHGISI
Sbjct: 651 VTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISI 767
Score = 199 bits (430), Expect(4) = e-127
Identities = 84/98 (85%), Positives = 85/98 (86%)
Frame = -3 / -3
Query: 813 MLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTV 634
MLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTV
Sbjct: 766 MLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTV 587
Query: 633 TSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSE 520
TSLI+MSLH FMWKNL SSV PDTSPLFT S TSE
Sbjct: 586 TSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSE 473
Score = 189 bits (407), Expect(4) = e-136
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 132 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 311
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 312 CKGDVTIQVDGNLLATTDLSQYK 380
Score = 188 bits (404), Expect(4) = e-127
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -3
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 397 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 218
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 217 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 116
Score = 168 bits (362), Expect(5) = 2e-086
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 134 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 313
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 314 QGRRDHPGGRQSAGDHGPEPVQG 382
Score = 146 bits (313), Expect(5) = 3e-081
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -2
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 386 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 207
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 206 LRAVLLAVAGGAQLADVERPARPGR 132
Score = 132 bits (283), Expect(4) = 5e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -1
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 381 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 202
Query: 203 CCLS 192
CC S
Sbjct: 201 CCPS 190
Score = 109 bits (232), Expect(5) = 2e-086
Identities = 44/56 (78%), Positives = 46/56 (82%)
Frame = +1 / +2
Query: 517 QLAGDGLREQRGGVRGHAAQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
+LAG GLREQRGGVR HAA+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 470 ELAGAGLREQRGGVRDHAAKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 637
Score = 100 bits (214), Expect(5) = 3e-081
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = -2 / -2
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRV 518
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRV
Sbjct: 623 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRV 471
Score = 80.8 bits (170), Expect(4) = e-136
Identities = 32/37 (86%), Positives = 32/37 (86%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKY 499
GNWIEILRVDNLVITGKG LDGQGPAVWSKNS Y
Sbjct: 381 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSLVLDY 491
Score = 75.3 bits (158), Expect(4) = e-127
Identities = 30/32 (93%), Positives = 31/32 (96%)
Frame = -3 / -3
Query: 483 EFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 475 EFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 380
Score = 74.4 bits (156), Expect(4) = 3e-032
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 256 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 381
Score = 54.2 bits (112), Expect(5) = 2e-086
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGART 482
T V GSR W TW SPAR + TGRA PCGART
Sbjct: 376 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGART 474
Score = 53.3 bits (110), Expect(4) = e-127
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 99 PSQHARRRRTPGGRRLSSHCLCTP 28
Score = 53.3 bits (110), Expect(5) = 3e-081
Identities = 20/31 (64%), Positives = 26/31 (83%)
Frame = -2 / -2
Query: 472 PHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
PHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 464 PHGGALPVELPLAGDHQVVHTQDLDPVTLVL 372
Score = 50.1 bits (103), Expect(4) = 3e-032
Identities = 24/39 (61%), Positives = 26/39 (66%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQ 507
*LDRD G PG HRQG+ RAGP RVEQEL +R Q
Sbjct: 383 *LDRDPACGQPGDHRQGEARRAGPRRVEQELAGAGLREQ 499
Score = 46.9 bits (96), Expect(4) = e-136
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 17 TNKNGVHRQCDESLLPPGVRLRRACWEGR 103
Score = 46.4 bits (95), Expect(4) = 3e-032
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 118 AMRKRRPGLAGRSTSASWAPPATARRT 198
Score = 42.3 bits (86), Expect(5) = 2e-086
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 24 KMACTGNAMRAFFLLAFVCAAHAGKD 101
Score = 41.8 bits (85), Expect(5) = 3e-081
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -2
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 98 LPSMRGADERQEEEGSHRIACARH 27
Score = 38.2 bits (77), Expect(5) = 3e-081
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 648 RTSRPCGCRPCWG 610
Score = 37.7 bits (76), Expect(4) = 5e-043
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = -1 / -1
Query: 461 GPARQGFPCR**PGYPRVESRSNY 390
GPAR+ PCR* PG P SRS+Y
Sbjct: 453 GPARRASPCR*SPGCPHAGSRSSY 382
Score = 35.9 bits (72), Expect(4) = 5e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 103 ASFPACAAQTNARRKKALIALPVHAI 26
Score = 27.2 bits (53), Expect(4) = 5e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 561 TGTRSCGRTW 532
Score = 25.8 bits (50), Expect(4) = 3e-032
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 25 KWRAQAMR*EP 57
Score = 24.0 bits (46), Expect(5) = 2e-086
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 710 DNQGEHHRRHM 742
>gb|CF489932.1|CF489932 POL1_61_B02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_61_B02_A002 5', mRNA sequence
Length = 733
Score = 287 bits (622), Expect(3) = e-135
Identities = 112/123 (91%), Positives = 120/123 (97%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 365 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 544
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 545 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 724
Query: 749 GPG 757
GPG
Sbjct: 725 GPG 733
Score = 251 bits (543), Expect(3) = e-125
Identities = 107/123 (86%), Positives = 109/123 (88%)
Frame = -3 / -2
Query: 756 PGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLE 577
PGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL
Sbjct: 732 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 553
Query: 576 LSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISI 397
SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISI
Sbjct: 552 FSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISI 373
Query: 396 QLP 388
QLP
Sbjct: 372 QLP 364
Score = 189 bits (407), Expect(3) = e-135
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +2
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 116 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 295
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 296 CKGDVTIQVDGNLLATTDLSQYK 364
Score = 188 bits (404), Expect(3) = e-125
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 381 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 202
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 201 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 100
Score = 176 bits (379), Expect(3) = 3e-094
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 367 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 546
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 547 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 660
Score = 168 bits (362), Expect(3) = 3e-094
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +1
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 118 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 297
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 298 QGRRDHPGGRQSAGDHGPEPVQG 366
Score = 153 bits (328), Expect(4) = 3e-086
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 646 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 467
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 466 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 356
Score = 146 bits (313), Expect(4) = 3e-086
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 370 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 191
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 190 LRAVLLAVAGGAQLADVERPARPGR 116
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 365 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 186
Query: 203 CCLS 192
CC S
Sbjct: 185 CCPS 174
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 360 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 494
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 240 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 365
Score = 53.3 bits (110), Expect(3) = e-125
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 83 PSQHARRRRTPGGRRLSSHCLCTP 12
Score = 46.9 bits (96), Expect(3) = e-135
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 1 TNKNGVHRQCDESLLPPGVRLRRACWEGR 87
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 102 AMRKRRPGLAGRSTSASWAPPATARRT 182
Score = 42.3 bits (86), Expect(3) = 3e-094
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 8 KMACTGNAMRAFFLLAFVCAAHAGKD 85
Score = 41.8 bits (85), Expect(4) = 3e-086
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 82 LPSMRGADERQEEEGSHRIACARH 11
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 494 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 366
Score = 38.2 bits (77), Expect(4) = 3e-086
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 671 RTSRPCGCRPCWG 633
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 87 ASFPACAAQTNARRKKALIALPVHAI 10
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 584 TGTRSCGRTW 555
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 9 KWRAQAMR*EP 41
>gb|CW241738.1|CW241738 104_701_11218937_148_37556_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218937, DNA
sequence
Length = 656
Score = 478 bits (1039), Expect = e-134
Identities = 191/217 (88%), Positives = 208/217 (95%)
Frame = +2 / +1
Query: 581 KFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGT 760
KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISIGPGT
Sbjct: 1 KFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGT 180
Query: 761 SKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLT 940
+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAASVLT
Sbjct: 181 TKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLT 360
Query: 941 VSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSL 1120
SKIHYENIKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAVSL
Sbjct: 361 ASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSL 540
Query: 1121 LCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGS 1231
LC+ K+PCTGVTMD+V VEYSG NNKTMA+C NAKGS
Sbjct: 541 LCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGS 651
Score = 407 bits (883), Expect = e-112
Identities = 180/218 (82%), Positives = 188/218 (86%)
Frame = -3 / -1
Query: 1236 LVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLT 1057
+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EVPV FLK TSLT
Sbjct: 656 VALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEVPVTFLKETSLT 477
Query: 1056 VTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLR 877
VTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYAL+R P +VF
Sbjct: 476 VTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFS 297
Query: 876 VQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVI 697
VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV
Sbjct: 296 VQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVT 117
Query: 696 PDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKN 583
PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKN
Sbjct: 116 PDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKN 3
Score = 91.8 bits (194), Expect(4) = 3e-046
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 303 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 443
Score = 70.7 bits (148), Expect(4) = 3e-046
Identities = 27/34 (79%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 583 VLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
VLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 3 VLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 104
Score = 67.0 bits (140), Expect(5) = 5e-034
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 1234 GAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GAALGV AY HGLVV A + D+DVIHGDA A DL AEQA+
Sbjct: 654 GAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQAD 532
Score = 57.9 bits (120), Expect(5) = 5e-034
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEEL 581
+RVGAVPGRR H+L+QHVLA HVHVEEL
Sbjct: 90 VRVGAVPGRRDRHILNQHVLALEHVHVEEL 1
Score = 57.9 bits (120), Expect(4) = 3e-046
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +3 / +2
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAP 1235
S A ASPW+TS S+ A TTRPW YA+TPRAAP
Sbjct: 557 SPALASPWITSRSNTVAKTTRPWPYAKTPRAAP 655
Score = 38.2 bits (77), Expect(5) = 5e-034
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 115 RTSRPCGCRPCWG 77
Score = 37.3 bits (75), Expect(5) = 5e-034
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 357 EHGGGVLVRLDPEAVARLLQRTV 289
Score = 26.7 bits (52), Expect(5) = 5e-034
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 442 C*GSTSCR**WG 407
Score = 24.0 bits (46), Expect(4) = 3e-046
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 177 DNQGEHHRRHM 209
>gb|CF487417.1|CF487417 POL1_43_D12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 5', mRNA sequence
Length = 742
Score = 287 bits (622), Expect(3) = e-133
Identities = 112/123 (91%), Positives = 120/123 (97%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 374 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 553
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 554 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 733
Query: 749 GPG 757
GPG
Sbjct: 734 GPG 742
Score = 251 bits (543), Expect(3) = e-124
Identities = 107/123 (86%), Positives = 109/123 (88%)
Frame = -3 / -2
Query: 756 PGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLE 577
PGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL
Sbjct: 741 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLA 562
Query: 576 LSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISI 397
SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISI
Sbjct: 561 FSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISI 382
Query: 396 QLP 388
QLP
Sbjct: 381 QLP 373
Score = 184 bits (396), Expect(3) = e-124
Identities = 76/94 (80%), Positives = 79/94 (84%)
Frame = -3 / -2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPP AD HA
Sbjct: 390 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPRADVHA 211
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 210 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 109
Score = 183 bits (395), Expect(3) = e-133
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +2 / +2
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SA GGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 125 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSARGGTGKQTILIPKGDYLVGPLNFTGP 304
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 305 CKGDVTIQVDGNLLATTDLSQYK 373
Score = 176 bits (379), Expect(3) = 1e-093
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 376 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 555
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 556 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 669
Score = 166 bits (358), Expect(3) = 1e-093
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +1
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +G RRH EAD+PH GRLP RTTQLHRP+
Sbjct: 127 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGARRHREADDPHP*GRLPRRTTQLHRPV 306
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 307 QGRRDHPGGRQSAGDHGPEPVQG 375
Score = 153 bits (328), Expect(4) = 3e-086
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 655 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 476
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 475 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 365
Score = 146 bits (313), Expect(4) = 3e-086
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 379 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 200
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 199 LRAVLLAVAGGAQLADVERPARPGR 125
Score = 130 bits (278), Expect(4) = 5e-043
Identities = 51/64 (79%), Positives = 53/64 (82%)
Frame = -1 / -3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRR P MPPAQPS
Sbjct: 374 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRAPTSMPPAQPS 195
Query: 203 CCLS 192
CC S
Sbjct: 194 CCPS 183
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 369 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 503
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 249 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 374
Score = 53.3 bits (110), Expect(3) = e-124
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 92 PSQHARRRRTPGGRRLSSHCLCTP 21
Score = 47.3 bits (97), Expect(3) = e-133
Identities = 19/34 (55%), Positives = 25/34 (73%)
Frame = +1 / +1
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGRVKGHR 126
+ ++GVH+QCDESL+PPG L RA EGR + R
Sbjct: 10 TNKNGVHRQCDESLLPPGVRLRRACWEGRSRQGR 111
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 111 AMRKRRPGLAGRSTSASWAPPATARRT 191
Score = 42.3 bits (86), Expect(3) = 1e-093
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 17 KMACTGNAMRAFFLLAFVCAAHAGKD 94
Score = 41.8 bits (85), Expect(4) = 3e-086
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 91 LPSMRGADERQEEEGSHRIACARH 20
Score = 40.0 bits (81), Expect(4) = 5e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 503 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 375
Score = 38.2 bits (77), Expect(4) = 3e-086
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 680 RTSRPCGCRPCWG 642
Score = 35.9 bits (72), Expect(4) = 5e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 96 ASFPACAAQTNARRKKALIALPVHAI 19
Score = 27.2 bits (53), Expect(4) = 5e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 593 TGTRSCGRTW 564
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 18 KWRAQAMR*EP 50
>gb|CW160105.1|CW160105 104_566_11149707_116_36428_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 725
Score = 273 bits (591), Expect(3) = e-131
Identities = 106/117 (90%), Positives = 114/117 (97%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 374 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 553
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDC 739
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDC
Sbjct: 554 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDC 724
Score = 235 bits (508), Expect(3) = e-121
Identities = 101/117 (86%), Positives = 103/117 (88%)
Frame = -3 / -3
Query: 738 QSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTP 559
QSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL SSV P
Sbjct: 723 QSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIP 544
Query: 558 DTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
DTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 543 DTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 373
Score = 189 bits (407), Expect(3) = e-131
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +2
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 125 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 304
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 305 CKGDVTIQVDGNLLATTDLSQYK 373
Score = 188 bits (404), Expect(3) = e-121
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -3
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 390 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 211
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 210 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 109
Score = 176 bits (379), Expect(3) = 3e-094
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 376 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 555
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 556 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 669
Score = 168 bits (362), Expect(3) = 3e-094
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +1
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 127 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 306
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 307 QGRRDHPGGRQSAGDHGPEPVQG 375
Score = 153 bits (328), Expect(4) = 3e-086
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -2
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 655 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 476
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 475 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 365
Score = 146 bits (313), Expect(4) = 3e-086
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -2
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 379 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 200
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 199 LRAVLLAVAGGAQLADVERPARPGR 125
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -1
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 374 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 195
Query: 203 CCLS 192
CC S
Sbjct: 194 CCPS 183
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 369 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 503
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 249 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 374
Score = 53.3 bits (110), Expect(3) = e-121
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 92 PSQHARRRRTPGGRRLSSHCLCTP 21
Score = 46.9 bits (96), Expect(3) = e-131
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 10 TNKNGVHRQCDESLLPPGVRLRRACWEGR 96
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 111 AMRKRRPGLAGRSTSASWAPPATARRT 191
Score = 42.3 bits (86), Expect(3) = 3e-094
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 17 KMACTGNAMRAFFLLAFVCAAHAGKD 94
Score = 41.8 bits (85), Expect(4) = 3e-086
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -2
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 91 LPSMRGADERQEEEGSHRIACARH 20
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -1
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 503 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 375
Score = 38.2 bits (77), Expect(4) = 3e-086
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 680 RTSRPCGCRPCWG 642
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 96 ASFPACAAQTNARRKKALIALPVHAI 19
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 593 TGTRSCGRTW 564
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 18 KWRAQAMR*EP 50
>gb|CL155266.1|CL155266 104_341_10782005_116_31472_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 641
Score = 350 bits (758), Expect(2) = e-129
Identities = 137/149 (91%), Positives = 146/149 (97%)
Frame = +2 / -3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 447 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 268
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 267 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 88
Query: 749 GPGTSKVNITGVTCGPGHGISIGSLGRYK 835
GPGT+KVNITGVTCGPGHGISIGSLGRYK
Sbjct: 87 GPGTTKVNITGVTCGPGHGISIGSLGRYK 1
Score = 312 bits (676), Expect(2) = e-121
Identities = 131/149 (87%), Positives = 133/149 (89%)
Frame = -3 / +2
Query: 834 LYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGL 655
LYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGL
Sbjct: 2 LYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGL 181
Query: 654 SPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFL 475
SPGAVTVTSLI+MSLH FMWKNL SSV PDTSPLFT S TSELGRILQSYFL EFL
Sbjct: 182 SPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFL 361
Query: 474 LHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
LHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 362 LHTAGPCPSSFPLPVITRLSTRRISIQLP 448
Score = 176 bits (379), Expect(3) = 4e-078
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / -2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 445 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 266
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 265 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 152
Score = 153 bits (328), Expect(3) = 4e-073
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / +1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 166 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 345
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 346 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 456
Score = 144 bits (310), Expect(2) = e-121
Identities = 60/70 (85%), Positives = 61/70 (87%)
Frame = -3 / +2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 431 ISIQLPLYWLRSVVASRLPSTWMVTSPLLGPVKLSGPTRYSPLGMRIVCFPVPPHADVHA 610
Query: 219 SCTAFVLSVL 190
SCTAFVLS L
Sbjct: 611 SCTAFVLSFL 640
Score = 134 bits (288), Expect(2) = e-129
Identities = 57/64 (89%), Positives = 59/64 (92%)
Frame = +2 / -3
Query: 191 KTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDL 370
K DSTKAVQEA SACGGTGKQTILIPKG++LVG LNFTGP KGDVTIQVDGNLLATTDL
Sbjct: 639 KKDSTKAVQEA*TSACGGTGKQTILIPKGEYLVGPLNFTGPSKGDVTIQVDGNLLATTDL 460
Query: 371 SQYK 382
SQYK
Sbjct: 459 SQYK 448
Score = 133 bits (284), Expect(3) = 4e-078
Identities = 51/65 (78%), Positives = 56/65 (86%)
Frame = +1 / -2
Query: 190 QDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPLQGRRDHPGGWQSAGDHGP 369
Q+ QHEGCAGGM +GVRRH EAD+PH GR+P TTQLHRP QGRRDHPGG QSAGDHGP
Sbjct: 640 QEGQHEGCAGGMNVGVRRHREADDPHP*GRIPRGTTQLHRPEQGRRDHPGGRQSAGDHGP 461
Query: 370 KPVQG 384
+PVQG
Sbjct: 460 EPVQG 446
Score = 125 bits (268), Expect(3) = 4e-073
Identities = 50/64 (78%), Positives = 52/64 (81%)
Frame = -1 / +3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VV +G RP *G SAS+CRRTP MPPAQPS
Sbjct: 447 PCTGSGPWSPADCRPPGWSRRPCSGR*S*VVPRGIRP*G*GSSASRCRRTPTFMPPAQPS 626
Query: 203 CCLS 192
CC S
Sbjct: 627 CCPS 638
Score = 100 bits (214), Expect(3) = 5e-029
Identities = 49/66 (74%), Positives = 52/66 (78%)
Frame = -2 / +1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE S + AL ED LLP AAARR CLLHS
Sbjct: 442 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSHEVFALRDEDRLLPGAAARRRSCLLHS 621
Query: 208 LRAVCL 191
LRAV L
Sbjct: 622 LRAVLL 639
Score = 75.3 bits (158), Expect(3) = 1e-027
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / -1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 452 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 318
Score = 68.9 bits (144), Expect(3) = 1e-027
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +3 / -1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RA + D+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 572 RSSSLRANTSWDHSTSPARARAT*PSRWTAICWRPRT*ASTR 447
Score = 40.0 bits (81), Expect(3) = 5e-029
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / +3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 318 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 446
Score = 38.2 bits (77), Expect(3) = 4e-073
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 141 RTSRPCGCRPCWG 179
Score = 27.2 bits (53), Expect(3) = 5e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 228 TGTRSCGRTW 257
Score = 24.4 bits (47), Expect(3) = 1e-027
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1 / -2
Query: 898 RPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRH 1005
R H+ R RRL HR +D E+ + H+H
Sbjct: 130 REHRHRRRRRLHLHRPRDNQGEHHRRHMRPRPWHQH 23
Score = 24.0 bits (46), Expect(3) = 4e-078
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 79 DNQGEHHRRHM 47
>gb|CW323759.1|CW323759 104_818_11476800_148_35909_096 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476800, DNA
sequence
Length = 622
Score = 331 bits (717), Expect(2) = e-128
Identities = 129/141 (91%), Positives = 138/141 (97%)
Frame = +2 / -2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 423 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 244
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 243 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 64
Query: 749 GPGTSKVNITGVTCGPGHGIS 811
GPGT+KVNITGVTCGPGHGIS
Sbjct: 63 GPGTTKVNITGVTCGPGHGIS 1
Score = 292 bits (632), Expect(2) = e-116
Identities = 123/141 (87%), Positives = 125/141 (88%)
Frame = -3 / +2
Query: 810 LMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVT 631
LMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVT
Sbjct: 2 LMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVT 181
Query: 630 SLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCP 451
SLI+MSLH FMWKNL SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCP
Sbjct: 182 SLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCP 361
Query: 450 SRFPLPVMTRLSTRRISIQLP 388
S FPLPV+TRLSTRRISIQLP
Sbjct: 362 SSFPLPVITRLSTRRISIQLP 424
Score = 176 bits (379), Expect(3) = 1e-079
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / -1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 421 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 242
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 241 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 128
Score = 153 bits (328), Expect(3) = 3e-075
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / +1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 142 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 321
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 322 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 432
Score = 151 bits (324), Expect(2) = e-128
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = +2 / -2
Query: 185 NGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGPCKGDVTIQVDGNLLATT
Sbjct: 621 DGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATT 442
Query: 365 DLSQYK 382
DLSQYK
Sbjct: 441 DLSQYK 424
Score = 148 bits (317), Expect(2) = e-116
Identities = 61/71 (85%), Positives = 62/71 (87%)
Frame = -3 / +2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 407 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 586
Query: 219 SCTAFVLSVLP 187
SCTAFVLS LP
Sbjct: 587 SCTAFVLSFLP 619
Score = 138 bits (296), Expect(3) = 1e-079
Identities = 53/65 (81%), Positives = 58/65 (89%)
Frame = +1 / -1
Query: 190 QDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPLQGRRDHPGGWQSAGDHGP 369
Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+QGRRDHPGG QSAGDHGP
Sbjct: 616 QEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGP 437
Query: 370 KPVQG 384
+PVQG
Sbjct: 436 EPVQG 422
Score = 132 bits (283), Expect(3) = 3e-075
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / +3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 423 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 602
Query: 203 CCLS 192
CC S
Sbjct: 603 CCPS 614
Score = 113 bits (241), Expect(3) = 1e-032
Identities = 53/68 (77%), Positives = 57/68 (83%)
Frame = -2 / +1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 418 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 597
Query: 208 LRAVCLAI 185
LRAV LA+
Sbjct: 598 LRAVLLAV 621
Score = 75.3 bits (158), Expect(2) = 8e-029
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / -3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 428 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 294
Score = 74.4 bits (156), Expect(2) = 8e-029
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / -3
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 548 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 423
Score = 40.0 bits (81), Expect(3) = 1e-032
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / +3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 294 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 422
Score = 38.2 bits (77), Expect(3) = 3e-075
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 117 RTSRPCGCRPCWG 155
Score = 27.2 bits (53), Expect(3) = 1e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 204 TGTRSCGRTW 233
Score = 24.0 bits (46), Expect(3) = 1e-079
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -1
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 55 DNQGEHHRRHM 23
>gb|CW312481.1|CW312481 104_802_11470780_116_35783_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470780, DNA
sequence
Length = 675
Score = 290 bits (627), Expect(2) = e-127
Identities = 113/124 (91%), Positives = 121/124 (97%)
Frame = +2 / -3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 373 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 194
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 193 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 14
Query: 749 GPGT 760
GPGT
Sbjct: 13 GPGT 2
Score = 253 bits (547), Expect(2) = e-116
Identities = 108/124 (87%), Positives = 110/124 (88%)
Frame = -3 / +3
Query: 759 VPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNL 580
VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL
Sbjct: 3 VPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNL 182
Query: 579 ELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRIS 400
SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRIS
Sbjct: 183 AFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRIS 362
Query: 399 IQLP 388
IQLP
Sbjct: 363 IQLP 374
Score = 189 bits (407), Expect(2) = e-127
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / -3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 622 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 443
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 442 CKGDVTIQVDGNLLATTDLSQYK 374
Score = 188 bits (404), Expect(2) = e-116
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / +3
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 357 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 536
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 537 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 638
Score = 176 bits (379), Expect(2) = 3e-087
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / -2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 371 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 192
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 191 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 78
Score = 168 bits (362), Expect(2) = 3e-087
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / -2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 620 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 441
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 440 QGRRDHPGGRQSAGDHGPEPVQG 372
Score = 153 bits (328), Expect(3) = 3e-079
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / +2
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 92 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 271
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 272 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 382
Score = 146 bits (313), Expect(3) = 3e-079
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / +2
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 368 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 547
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 548 LRAVLLAVAGGAQLADVERPARPGR 622
Score = 132 bits (283), Expect(3) = 2e-038
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / +1
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 373 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 552
Query: 203 CCLS 192
CC S
Sbjct: 553 CCPS 564
Score = 75.3 bits (158), Expect(3) = 3e-037
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / -1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 378 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 244
Score = 74.4 bits (156), Expect(3) = 3e-037
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / -1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 498 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 373
Score = 46.4 bits (95), Expect(3) = 3e-037
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / -1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 636 AMRKRRPGLAGRSTSASWAPPATARRT 556
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / +1
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 244 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 372
Score = 38.2 bits (77), Expect(3) = 3e-079
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +1
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 67 RTSRPCGCRPCWG 105
Score = 27.2 bits (53), Expect(3) = 2e-038
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / +1
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 154 TGTRSCGRTW 183
>gb|CW309833.1|CW309833 104_798_11469399_148_35741_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469399, DNA
sequence
Length = 614
Score = 411 bits (892), Expect(2) = e-127
Identities = 163/178 (91%), Positives = 173/178 (97%)
Frame = +2 / -3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 534 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 355
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 354 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 175
Query: 749 GPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYED 922
GPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYED
Sbjct: 174 GPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYED 1
Score = 358 bits (777), Expect(2) = e-112
Identities = 153/178 (85%), Positives = 157/178 (88%)
Frame = -3 / +2
Query: 921 SSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPME 742
SSYAL+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPME
Sbjct: 2 SSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 181
Query: 741 MQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVT 562
MQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL SSV
Sbjct: 182 MQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVI 361
Query: 561 PDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 362 PDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 535
Score = 176 bits (379), Expect(4) = 9e-060
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / -2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 532 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 353
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 352 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 239
Score = 153 bits (328), Expect(3) = 5e-055
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / +1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 253 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 432
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 433 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 543
Score = 75.3 bits (158), Expect(3) = 3e-024
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / -1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 539 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 405
Score = 69.3 bits (145), Expect(2) = e-112
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = -1 / +3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKG 309
PCTG GPWSPADC PPGWSRRPC G
Sbjct: 534 PCTGSGPWSPADCRPPGWSRRPCTG 608
Score = 67.5 bits (141), Expect(2) = e-127
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +1 / -2
Query: 304 HRPLQGRRDHPGGWQSAGDHGPKPVQG 384
HRP+QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 613 HRPVQGRRDHPGGRQSAGDHGPEPVQG 533
Score = 65.7 bits (137), Expect(4) = 9e-060
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +2 / -3
Query: 305 TGPCKGDVTIQVDGNLLATTDLSQYK 382
TGPCKGDVTIQVDGNLLATTDLSQYK
Sbjct: 612 TGPCKGDVTIQVDGNLLATTDLSQYK 535
Score = 64.8 bits (135), Expect(3) = 5e-055
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = -3 / +2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPV 304
I + LYWLRSVVASRLPSTWMVTSPL GPV
Sbjct: 518 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPV 613
Score = 57.4 bits (119), Expect(3) = 3e-024
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = +3 / -1
Query: 303 SQALARAT*PSRWMAICWRPRT*ASTR 383
S A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 614 SPARARAT*PSRWTAICWRPRT*ASTR 534
Score = 38.2 bits (77), Expect(3) = 5e-055
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 228 RTSRPCGCRPCWG 266
Score = 24.4 bits (47), Expect(3) = 3e-024
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1 / -2
Query: 898 RPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRH 1005
R H+ R RRL HR +D E+ + H+H
Sbjct: 217 REHRHRRRRRLHLHRPRDNQGEHHRRHMRPRPWHQH 110
Score = 24.0 bits (46), Expect(4) = 9e-060
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / -2
Query: 883 EDDVRRPHQGVRG 921
ED+ R P QGVRG
Sbjct: 40 EDEQRPPDQGVRG 2
Score = 24.0 bits (46), Expect(4) = 9e-060
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 166 DNQGEHHRRHM 134
>gb|CF489809.1|CF489809 POL1_59_F04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_59_F04_A002 5', mRNA sequence
Length = 716
Score = 261 bits (564), Expect(3) = e-127
Identities = 102/113 (90%), Positives = 110/113 (97%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 378 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 557
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGV 727
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGV
Sbjct: 558 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGV 716
Score = 226 bits (488), Expect(3) = e-118
Identities = 97/113 (85%), Positives = 99/113 (87%)
Frame = -3 / -2
Query: 726 TPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSP 547
TPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL SSV PDTSP
Sbjct: 715 TPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSP 536
Query: 546 LFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
LFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 535 LFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 377
Score = 189 bits (407), Expect(3) = e-127
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 129 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 308
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 309 CKGDVTIQVDGNLLATTDLSQYK 377
Score = 188 bits (404), Expect(3) = e-118
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 394 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 215
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 214 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 113
Score = 176 bits (379), Expect(3) = 3e-094
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 380 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 559
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 560 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 673
Score = 168 bits (362), Expect(3) = 3e-094
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 131 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 310
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 311 QGRRDHPGGRQSAGDHGPEPVQG 379
Score = 153 bits (328), Expect(4) = 3e-086
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 659 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 480
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 479 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 369
Score = 146 bits (313), Expect(4) = 3e-086
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 383 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 204
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 203 LRAVLLAVAGGAQLADVERPARPGR 129
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 378 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 199
Query: 203 CCLS 192
CC S
Sbjct: 198 CCPS 187
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 373 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 507
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 253 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 378
Score = 53.3 bits (110), Expect(3) = e-118
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 96 PSQHARRRRTPGGRRLSSHCLCTP 25
Score = 46.9 bits (96), Expect(3) = e-127
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 14 TNKNGVHRQCDESLLPPGVRLRRACWEGR 100
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 115 AMRKRRPGLAGRSTSASWAPPATARRT 195
Score = 42.3 bits (86), Expect(3) = 3e-094
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 21 KMACTGNAMRAFFLLAFVCAAHAGKD 98
Score = 41.8 bits (85), Expect(4) = 3e-086
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 95 LPSMRGADERQEEEGSHRIACARH 24
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 507 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 379
Score = 38.2 bits (77), Expect(4) = 3e-086
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 684 RTSRPCGCRPCWG 646
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 100 ASFPACAAQTNARRKKALIALPVHAI 23
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 597 TGTRSCGRTW 568
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 22 KWRAQAMR*EP 54
>gb|CF486455.1|CF486455 POL1_37_F12.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_37_F12_A002 5', mRNA sequence
Length = 719
Score = 259 bits (560), Expect(3) = e-126
Identities = 101/112 (90%), Positives = 109/112 (97%)
Frame = +2 / +1
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 382 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 561
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIG 724
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIG
Sbjct: 562 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 717
Score = 226 bits (488), Expect(3) = e-118
Identities = 97/113 (85%), Positives = 99/113 (87%)
Frame = -3 / -1
Query: 726 TPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSP 547
TPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL SSV PDTSP
Sbjct: 719 TPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSP 540
Query: 546 LFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
LFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 539 LFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 381
Score = 189 bits (407), Expect(3) = e-126
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 133 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 312
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 313 CKGDVTIQVDGNLLATTDLSQYK 381
Score = 188 bits (404), Expect(3) = e-118
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 398 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 219
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 218 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 117
Score = 176 bits (379), Expect(3) = 3e-094
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +3
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 384 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 563
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 564 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 677
Score = 168 bits (362), Expect(3) = 3e-094
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 135 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 314
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 315 QGRRDHPGGRQSAGDHGPEPVQG 383
Score = 153 bits (328), Expect(4) = 3e-086
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 663 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 484
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 483 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 373
Score = 146 bits (313), Expect(4) = 3e-086
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 387 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 208
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 207 LRAVLLAVAGGAQLADVERPARPGR 133
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 382 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 203
Query: 203 CCLS 192
CC S
Sbjct: 202 CCPS 191
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 377 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 511
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 257 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 382
Score = 53.3 bits (110), Expect(3) = e-118
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 100 PSQHARRRRTPGGRRLSSHCLCTP 29
Score = 46.9 bits (96), Expect(3) = e-126
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 18 TNKNGVHRQCDESLLPPGVRLRRACWEGR 104
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 119 AMRKRRPGLAGRSTSASWAPPATARRT 199
Score = 42.3 bits (86), Expect(3) = 3e-094
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 25 KMACTGNAMRAFFLLAFVCAAHAGKD 102
Score = 41.8 bits (85), Expect(4) = 3e-086
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 99 LPSMRGADERQEEEGSHRIACARH 28
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 511 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 383
Score = 38.2 bits (77), Expect(4) = 3e-086
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 688 RTSRPCGCRPCWG 650
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 104 ASFPACAAQTNARRKKALIALPVHAI 27
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 601 TGTRSCGRTW 572
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 26 KWRAQAMR*EP 58
>gb|CF489443.1|CF489443 POL1_57_D04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_D04_A002 5', mRNA sequence
Length = 711
Score = 259 bits (560), Expect(3) = e-126
Identities = 101/112 (90%), Positives = 109/112 (97%)
Frame = +2 / +1
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 376 GNWIEILRVDNLVITGKGRLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 555
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIG 724
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIG
Sbjct: 556 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 711
Score = 221 bits (477), Expect(3) = e-116
Identities = 95/112 (84%), Positives = 97/112 (86%)
Frame = -3 / -2
Query: 723 PMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPL 544
PMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL SSV PDTSPL
Sbjct: 710 PMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPL 531
Query: 543 FTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
FT S TSELGRILQSYFL EFLLHTAGPCPS PLPV+TRLSTRRISIQLP
Sbjct: 530 FT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSLPLPVITRLSTRRISIQLP 375
Score = 189 bits (407), Expect(3) = e-126
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 127 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 306
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 307 CKGDVTIQVDGNLLATTDLSQYK 375
Score = 188 bits (404), Expect(3) = e-116
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 392 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 213
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 212 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 111
Score = 176 bits (379), Expect(3) = 3e-094
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +3
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 378 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 557
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 558 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 671
Score = 168 bits (362), Expect(3) = 3e-094
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 129 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 308
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 309 QGRRDHPGGRQSAGDHGPEPVQG 377
Score = 151 bits (325), Expect(4) = 8e-086
Identities = 64/97 (65%), Positives = 73/97 (75%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 657 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 478
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV+ LAGD QV+H +LDP+T+VL
Sbjct: 477 GARVLAPHGGALPVEPPLAGDHQVVHTQDLDPVTLVL 367
Score = 146 bits (313), Expect(4) = 8e-086
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 381 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 202
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 201 LRAVLLAVAGGAQLADVERPARPGR 127
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 376 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 197
Query: 203 CCLS 192
CC S
Sbjct: 196 CCPS 185
Score = 74.4 bits (156), Expect(4) = 3e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 251 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 376
Score = 73.9 bits (155), Expect(4) = 3e-039
Identities = 32/45 (71%), Positives = 32/45 (71%)
Frame = +3 / +2
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR TGRA PCGART APRSTTARS P
Sbjct: 371 TRVTGSRSCVWTTW*SPARGGSTGRAPPCGARTRAPRSTTARSCP 505
Score = 53.3 bits (110), Expect(3) = e-116
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 94 PSQHARRRRTPGGRRLSSHCLCTP 23
Score = 46.9 bits (96), Expect(3) = e-126
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 12 TNKNGVHRQCDESLLPPGVRLRRACWEGR 98
Score = 46.4 bits (95), Expect(4) = 3e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 113 AMRKRRPGLAGRSTSASWAPPATARRT 193
Score = 42.3 bits (86), Expect(3) = 3e-094
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 19 KMACTGNAMRAFFLLAFVCAAHAGKD 96
Score = 41.8 bits (85), Expect(4) = 8e-086
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 93 LPSMRGADERQEEEGSHRIACARH 22
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 505 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 377
Score = 38.2 bits (77), Expect(4) = 8e-086
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 682 RTSRPCGCRPCWG 644
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 98 ASFPACAAQTNARRKKALIALPVHAI 21
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 595 TGTRSCGRTW 566
Score = 25.8 bits (50), Expect(4) = 3e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 20 KWRAQAMR*EP 52
>gb|CF488397.1|CF488397 POL1_49_E07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_49_E07_A002 5', mRNA sequence
Length = 699
Score = 279 bits (603), Expect(3) = e-126
Identities = 109/120 (90%), Positives = 117/120 (97%)
Frame = +2 / +1
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 340 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 519
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISI 748
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISI
Sbjct: 520 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISI 699
Score = 242 bits (523), Expect(3) = e-116
Identities = 104/120 (86%), Positives = 106/120 (88%)
Frame = -3 / -2
Query: 747 MEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSS 568
MEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL SS
Sbjct: 698 MEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSS 519
Query: 567 VTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
V PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 518 VIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 339
Score = 182 bits (392), Expect(3) = e-116
Identities = 75/94 (79%), Positives = 79/94 (84%)
Frame = -3 / -2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS TR SPLG+RIVCFPVPPHAD HA
Sbjct: 356 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGQTR*SPLGVRIVCFPVPPHADVHA 177
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 176 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 75
Score = 182 bits (392), Expect(3) = e-126
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTIL PKGD+LV LNFTGP
Sbjct: 91 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILTPKGDYLV*PLNFTGP 270
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 271 CKGDVTIQVDGNLLATTDLSQYK 339
Score = 176 bits (379), Expect(3) = 2e-089
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +3
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 342 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 521
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 522 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 635
Score = 165 bits (355), Expect(3) = 2e-089
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP TTQLHRP+
Sbjct: 93 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRLTTQLHRPV 272
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 273 QGRRDHPGGRQSAGDHGPEPVQG 341
Score = 153 bits (328), Expect(4) = 1e-082
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 621 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 442
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 441 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 331
Score = 146 bits (313), Expect(4) = 1e-082
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 345 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRGEDRLLPGAAARRRPCLLHS 166
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 165 LRAVLLAVAGGAQLADVERPARPGR 91
Score = 132 bits (283), Expect(3) = 2e-038
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 340 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 161
Query: 203 CCLS 192
CC S
Sbjct: 160 CCPS 149
Score = 75.3 bits (158), Expect(3) = 4e-037
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 335 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 469
Score = 73.9 bits (155), Expect(3) = 4e-037
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 215 RSSPLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 340
Score = 46.4 bits (95), Expect(3) = 4e-037
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 77 AMRKRRPGLAGRSTSASWAPPATARRT 157
Score = 40.0 bits (81), Expect(3) = 2e-038
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 469 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 341
Score = 38.2 bits (77), Expect(4) = 1e-082
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 646 RTSRPCGCRPCWG 608
Score = 37.7 bits (76), Expect(3) = e-116
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSH 51
PS HAR RR PGG RLSSH
Sbjct: 58 PSQHARRRRTPGGRRLSSH 2
Score = 34.1 bits (68), Expect(3) = e-126
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 52 CDESLVPPGPLLHRAW*EGR 111
CDESL+PPG L RA EGR
Sbjct: 3 CDESLLPPGVRLRRACWEGR 62
Score = 29.9 bits (59), Expect(4) = 1e-082
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRI 50
L +M A+E QEE+GSHRI
Sbjct: 57 LPSMRGADERQEEEGSHRI 1
Score = 29.5 bits (58), Expect(3) = 2e-089
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2 / +1
Query: 50 NAMRALFLLVLFCIVHGEKE 109
NAMRA FLL C H K+
Sbjct: 1 NAMRAFFLLAFVCAAHAGKD 60
Score = 27.2 bits (53), Expect(3) = 2e-038
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 559 TGTRSCGRTW 530
>gb|CF480256.1|CF480256 POL1_64_D11.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 5', mRNA sequence
Length = 691
Score = 215 bits (464), Expect(4) = e-125
Identities = 84/92 (91%), Positives = 91/92 (98%)
Frame = +2 / +2
Query: 545 NGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIG 724
NGEVSG+TLLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIG
Sbjct: 413 NGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIG 592
Query: 725 VGDDCISIGPGTSKVNITGVTCGPGHGISIGS 820
VGDDCISIGPGT+KVNITGVTCGPGHGISIGS
Sbjct: 593 VGDDCISIGPGTTKVNITGVTCGPGHGISIGS 688
Score = 192 bits (414), Expect(4) = e-113
Identities = 79/91 (86%), Positives = 80/91 (87%)
Frame = -3 / -2
Query: 819 LPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAV 640
LPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAV
Sbjct: 687 LPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAV 508
Query: 639 TVTSLISMSLHRYMFMWKNLELSSVTPDTSP 547
TVTSLI+MSLH FMWKNL SSV PDTSP
Sbjct: 507 TVTSLINMSLHWNTFMWKNLAFSSVIPDTSP 415
Score = 127 bits (271), Expect(4) = e-125
Identities = 49/58 (84%), Positives = 51/58 (87%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSG 562
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+V G G
Sbjct: 258 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVKTGRCPG 431
Score = 122 bits (260), Expect(4) = e-125
Identities = 49/51 (96%), Positives = 50/51 (98%)
Frame = +2 / +3
Query: 230 SACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
SACGGTGKQTILIPKGD+LVG LNFTGPCKGDVTIQVDGNLLATTDLSQYK
Sbjct: 105 SACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATTDLSQYK 257
Score = 119 bits (255), Expect(4) = e-113
Identities = 49/57 (85%), Positives = 50/57 (87%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHAD 229
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD
Sbjct: 274 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHAD 104
Score = 113 bits (241), Expect(5) = 7e-074
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = +1 / +2
Query: 202 HEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPLQGRRDHPGGWQSAGDHGPKPVQ 381
H G +GVRRH EAD+PH GRLP RTTQLHRP+QGRRDHPGG QSAGDHGP+PVQ
Sbjct: 77 HAGKDAPAKVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGDHGPEPVQ 256
Query: 382 G 384
G
Sbjct: 257 G 259
Score = 112 bits (240), Expect(4) = e-113
Identities = 48/58 (82%), Positives = 50/58 (86%)
Frame = -3 / -1
Query: 561 PDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
P P+FT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 430 PGHLPVFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 257
Score = 110 bits (234), Expect(5) = 1e-069
Identities = 44/61 (72%), Positives = 48/61 (78%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP + P+
Sbjct: 258 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTLAGASFPA 79
Query: 203 C 201
C
Sbjct: 78 C 76
Score = 91.8 bits (194), Expect(5) = 7e-074
Identities = 36/47 (76%), Positives = 38/47 (80%)
Frame = +1 / +1
Query: 544 QRGGVRGHAAQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
+RGGVR HAA+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 412 KRGGVRDHAAKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 552
Score = 85.8 bits (181), Expect(4) = 4e-030
Identities = 41/53 (77%), Positives = 44/53 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARR 230
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR
Sbjct: 263 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARR 105
Score = 85.8 bits (181), Expect(5) = 7e-074
Identities = 38/51 (74%), Positives = 41/51 (80%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLRE 543
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLRE
Sbjct: 260 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRE 412
Score = 84.5 bits (178), Expect(5) = 1e-069
Identities = 34/42 (80%), Positives = 37/42 (88%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPV 545
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPV
Sbjct: 538 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPV 413
Score = 75.3 bits (158), Expect(4) = 3e-030
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 253 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 387
Score = 74.4 bits (156), Expect(4) = 3e-030
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 133 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 258
Score = 71.2 bits (149), Expect(5) = 1e-069
Identities = 30/57 (52%), Positives = 37/57 (64%)
Frame = -2 / -3
Query: 550 PVVHEVHHQRVGKDXXXXXXXXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
P H V HQRVG+D APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 419 PRFHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 249
Score = 50.6 bits (104), Expect(4) = e-113
Identities = 19/24 (79%), Positives = 19/24 (79%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHC CTP
Sbjct: 89 PSQHARRRRTPGGRRLSSHCKCTP 18
Score = 45.1 bits (92), Expect(4) = e-125
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = +1 / +1
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH QCDESL+PPG L RA EGR
Sbjct: 7 TNKNGVHLQCDESLLPPGVRLRRACWEGR 93
Score = 40.9 bits (83), Expect(5) = 7e-074
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 14 KMACTCNAMRAFFLLAFVCAAHAGKD 91
Score = 40.0 bits (81), Expect(4) = 4e-030
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 387 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 259
Score = 38.2 bits (77), Expect(5) = 1e-069
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 563 RTSRPCGCRPCWG 525
Score = 37.3 bits (75), Expect(5) = 1e-069
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI ARH
Sbjct: 88 LPSMRGADERQEEEGSHRIASARH 17
Score = 36.3 bits (73), Expect(4) = 4e-030
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 93 ASFPACAAQTNARRKKALIALQVHAI 16
Score = 27.2 bits (53), Expect(4) = 4e-030
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 476 TGTRSCGRTW 447
Score = 24.4 bits (47), Expect(4) = 3e-030
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1 / +1
Query: 898 RPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRH 1005
R H+ R RRL HR +D E+ + H+H
Sbjct: 574 REHRHRRRRRLHLHRPRDNQGEHHRRHMRPRPWHQH 681
Score = 24.0 bits (46), Expect(5) = 7e-074
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 625 DNQGEHHRRHM 657
Score = 22.6 bits (43), Expect(4) = 3e-030
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 33 RWRAQTMR*EP 65
+WRA MR*EP
Sbjct: 15 KWRALAMR*EP 47
>gb|CF480747.1|CF480747 POL1_67_D09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_67_D09_A002 5', mRNA sequence
Length = 748
Score = 179 bits (385), Expect(5) = e-124
Identities = 68/78 (87%), Positives = 75/78 (96%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+V NGEVSG+T
Sbjct: 378 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVTNGEVSGIT 557
Query: 569 LLNSKFFHMNMYRCKDML 622
LLN+KFFHMN+++CKDML
Sbjct: 558 LLNAKFFHMNVFQCKDML 611
Score = 151 bits (324), Expect(5) = e-124
Identities = 61/66 (92%), Positives = 63/66 (95%)
Frame = +2 / +3
Query: 185 NGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGPCKGDVTIQVDGNLLATT 364
+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGPCKGDVTIQVDGNLLATT
Sbjct: 180 SGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGPCKGDVTIQVDGNLLATT 359
Query: 365 DLSQYK 382
DLSQYK
Sbjct: 360 DLSQYK 377
Score = 149 bits (321), Expect(5) = e-115
Identities = 62/72 (86%), Positives = 63/72 (87%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 394 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 215
Query: 219 SCTAFVLSVLPL 184
SCTAFVLS LPL
Sbjct: 214 SCTAFVLSFLPL 179
Score = 149 bits (319), Expect(5) = e-115
Identities = 64/78 (82%), Positives = 66/78 (84%)
Frame = -3 / -1
Query: 621 SMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRF 442
+MSLH FMWKNL SSV PDTSPL T S TSELGRILQSYFL EFLLHTAGPCPS F
Sbjct: 610 NMSLHWNTFMWKNLAFSSVIPDTSPLVT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSF 431
Query: 441 PLPVMTRLSTRRISIQLP 388
PLPV+TRLSTRRISIQLP
Sbjct: 430 PLPVITRLSTRRISIQLP 377
Score = 139 bits (299), Expect(5) = 4e-087
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +1 / +2
Query: 181 RQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPLQGRRDHPGGWQSAGD 360
R+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+QGRRDHPGG QSAGD
Sbjct: 176 RKRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPVQGRRDHPGGRQSAGD 355
Query: 361 HGPKPVQG 384
HGP+PVQG
Sbjct: 356 HGPEPVQG 379
Score = 135 bits (290), Expect(5) = 4e-087
Identities = 58/76 (76%), Positives = 63/76 (82%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLR+QRGGVR HA
Sbjct: 380 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRDQRGGVRDHA 559
Query: 571 AQLQVLPHEHVPVQGH 618
A+ QVLPHE VPVQGH
Sbjct: 560 AKRQVLPHERVPVQGH 607
Score = 132 bits (283), Expect(5) = 3e-077
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 378 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 199
Query: 203 CCLS 192
CC S
Sbjct: 198 CCPS 187
Score = 125 bits (268), Expect(5) = 3e-077
Identities = 54/85 (63%), Positives = 61/85 (71%)
Frame = -2 / -3
Query: 634 HVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXXXXXXXAPHGWAL 455
H L QHVLA HVHVEELGV QRDPGHLPV H V HQRVG+D APHG AL
Sbjct: 623 HPLXQHVLALEHVHVEELGV*QRDPGHLPVGHVVQHQRVGQDLAVVLLGARVLAPHGGAL 444
Query: 454 PVKVSLAGDDQVIHA*NLDPITMVL 380
PV++ LAGD QV+H +LDP+T+VL
Sbjct: 443 PVELPLAGDHQVVHTQDLDPVTLVL 369
Score = 113 bits (241), Expect(4) = 5e-038
Identities = 54/71 (76%), Positives = 57/71 (80%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 383 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 204
Query: 208 LRAVCLAIAGG 176
LRAV LA G
Sbjct: 203 LRAVLLAAFAG 171
Score = 106 bits (226), Expect(5) = e-124
Identities = 41/45 (91%), Positives = 44/45 (97%)
Frame = +2 / +2
Query: 623 IKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPG 757
++DVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISIGPG
Sbjct: 614 LRDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPG 748
Score = 100 bits (213), Expect(5) = e-115
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = -3 / -2
Query: 756 PGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSL 625
PGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSL
Sbjct: 747 PGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSL 616
Score = 75.3 bits (158), Expect(4) = 4e-036
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 373 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 507
Score = 74.4 bits (156), Expect(4) = 4e-036
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 253 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 378
Score = 53.3 bits (110), Expect(5) = e-115
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 93 PSQHARRRRTPGGRRLSSHCLCTP 22
Score = 46.9 bits (96), Expect(5) = e-124
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 11 TNKNGVHRQCDESLLPPGVRLRRACWEGR 97
Score = 43.7 bits (89), Expect(5) = e-115
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -3 / -1
Query: 183 PEAPNLVMSKDPPGPDAFASMP 118
PEAPNL+MS DPPGPDA + P
Sbjct: 175 PEAPNLLMSNDPPGPDAAFASP 110
Score = 42.8 bits (87), Expect(5) = e-124
Identities = 17/24 (70%), Positives = 18/24 (75%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMA 191
A R+RPGL G STS SWAPPA A
Sbjct: 112 AMRRRRPGLAGRSTSASWAPPAKA 183
Score = 42.3 bits (86), Expect(5) = 4e-087
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 18 KMACTGNAMRAFFLLAFVCAAHAGKD 95
Score = 41.8 bits (85), Expect(5) = 3e-077
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 92 LPSMRGADERQEEEGSHRIACARH 21
Score = 41.8 bits (85), Expect(5) = 4e-087
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 625 QGRDRDGARGQPQHGWHPHG 684
+G D GARGQPQHG HPHG
Sbjct: 616 KGCDGHGARGQPQHGRHPHG 675
Score = 40.9 bits (83), Expect(5) = 4e-087
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASG 184
ASGPGGSFDI+KLGASG
Sbjct: 126 ASGPGGSFDISKLGASG 176
Score = 40.0 bits (81), Expect(4) = 5e-038
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 507 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 379
Score = 38.2 bits (77), Expect(5) = 3e-077
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -3
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 686 RTSRPCGCRPCWG 648
Score = 35.9 bits (72), Expect(4) = 5e-038
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 97 ASFPACAAQTNARRKKALIALPVHAI 20
Score = 34.5 bits (69), Expect(4) = 4e-036
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQ 186
VRAW V+RH QVGRLR+
Sbjct: 128 VRAWRVVRHQQVGRLRR 178
Score = 29.0 bits (57), Expect(5) = 3e-077
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHV 629
+RVGAVPGRR H+
Sbjct: 661 VRVGAVPGRRDRHI 620
Score = 27.2 bits (53), Expect(4) = 5e-038
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 597 TGTRSCGRTW 568
Score = 25.8 bits (50), Expect(4) = 4e-036
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 19 KWRAQAMR*EP 51
>gb|CF481397.1|CF481397 POL1_71_F02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_F02_A002 5', mRNA sequence
Length = 693
Score = 243 bits (526), Expect(3) = e-122
Identities = 94/106 (88%), Positives = 104/106 (98%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VN+GEVSG+T
Sbjct: 375 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNDGEVSGIT 554
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITI 706
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSP+TDGIHMGDSSG+TI
Sbjct: 555 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPHTDGIHMGDSSGVTI 692
Score = 210 bits (452), Expect(3) = e-113
Identities = 90/106 (84%), Positives = 92/106 (86%)
Frame = -3 / -3
Query: 705 MVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSIT 526
MV PDESPMWMPSV GLSPGAVTVTSLI+MSLH FMWKNL SSV PDTSP FT S T
Sbjct: 691 MVTPDESPMWMPSVWGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPSFT*SST 512
Query: 525 SELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
SELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 511 SELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 374
Score = 189 bits (407), Expect(3) = e-122
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 126 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 305
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 306 CKGDVTIQVDGNLLATTDLSQYK 374
Score = 188 bits (404), Expect(3) = e-113
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -3
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 391 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 212
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 211 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 110
Score = 171 bits (369), Expect(3) = 8e-093
Identities = 73/98 (74%), Positives = 78/98 (79%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLRE+RGGVR HA
Sbjct: 377 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRERRGGVRDHA 556
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQP HG HPHG
Sbjct: 557 AKRQVLPHERVPVQGHVD*GCDGHGARGQPPHGRHPHG 670
Score = 168 bits (362), Expect(3) = 8e-093
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 128 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 307
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 308 QGRRDHPGGRQSAGDHGPEPVQG 376
Score = 153 bits (328), Expect(4) = 2e-084
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -2
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 656 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 477
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 476 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 366
Score = 146 bits (313), Expect(4) = 2e-084
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -2
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 380 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 201
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 200 LRAVLLAVAGGAQLADVERPARPGR 126
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -1
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 375 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 196
Query: 203 CCLS 192
CC S
Sbjct: 195 CCPS 184
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 370 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 504
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 250 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 375
Score = 53.3 bits (110), Expect(3) = e-113
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 93 PSQHARRRRTPGGRRLSSHCLCTP 22
Score = 46.9 bits (96), Expect(3) = e-122
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 11 TNKNGVHRQCDESLLPPGVRLRRACWEGR 97
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 112 AMRKRRPGLAGRSTSASWAPPATARRT 192
Score = 42.3 bits (86), Expect(3) = 8e-093
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 18 KMACTGNAMRAFFLLAFVCAAHAGKD 95
Score = 41.8 bits (85), Expect(4) = 2e-084
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -2
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 92 LPSMRGADERQEEEGSHRIACARH 21
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -1
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 504 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 376
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 97 ASFPACAAQTNARRKKALIALPVHAI 20
Score = 32.2 bits (64), Expect(4) = 2e-084
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PC G
Sbjct: 681 RTSRPCGCRPCGG 643
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 594 TGTRSCGRTW 565
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 19 KWRAQAMR*EP 51
>gb|CF483347.1|CF483347 POL1_21_D07.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_21_D07_A002 5', mRNA sequence
Length = 709
Score = 248 bits (536), Expect(3) = e-121
Identities = 96/106 (90%), Positives = 104/106 (98%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 390 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 569
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITI 706
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI
Sbjct: 570 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTI 707
Score = 215 bits (464), Expect(3) = e-114
Identities = 92/106 (86%), Positives = 94/106 (88%)
Frame = -3 / -1
Query: 705 MVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSIT 526
MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL SSV PDTSPLFT S T
Sbjct: 706 MVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SST 527
Query: 525 SELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
SELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 526 SELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 389
Score = 187 bits (403), Expect(3) = e-121
Identities = 76/83 (91%), Positives = 80/83 (96%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTG+QTILIPKGD+LVG LNFTGP
Sbjct: 141 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGEQTILIPKGDYLVGPLNFTGP 320
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 321 CKGDVTIQVDGNLLATTDLSQYK 389
Score = 184 bits (396), Expect(3) = e-114
Identities = 76/94 (80%), Positives = 79/94 (84%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVC PVPPHAD HA
Sbjct: 406 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCSPVPPHADVHA 227
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 226 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 125
Score = 176 bits (379), Expect(3) = 2e-092
Identities = 75/98 (76%), Positives = 79/98 (80%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 392 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 571
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 572 AKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 685
Score = 165 bits (355), Expect(3) = 2e-092
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH AD+PH GRLP RTTQLHRP+
Sbjct: 143 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHRGADDPHP*GRLPRRTTQLHRPV 322
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 323 QGRRDHPGGRQSAGDHGPEPVQG 391
Score = 153 bits (328), Expect(4) = 7e-085
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 671 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 492
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 491 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 381
Score = 146 bits (313), Expect(4) = 7e-085
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 395 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 216
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 215 LRAVLLAVAGGAQLADVERPARPGR 141
Score = 130 bits (278), Expect(4) = 1e-042
Identities = 51/64 (79%), Positives = 53/64 (82%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SA +CRRTP MPPAQPS
Sbjct: 390 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSAPRCRRTPTSMPPAQPS 211
Query: 203 CCLS 192
CC S
Sbjct: 210 CCPS 199
Score = 75.3 bits (158), Expect(4) = 3e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 385 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 519
Score = 74.4 bits (156), Expect(4) = 3e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 265 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 390
Score = 53.3 bits (110), Expect(3) = e-114
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 108 PSQHARRRRTPGGRRLSSHCLCTP 37
Score = 46.4 bits (95), Expect(4) = 3e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 127 AMRKRRPGLAGRSTSASWAPPATARRT 207
Score = 43.2 bits (88), Expect(3) = e-121
Identities = 17/29 (58%), Positives = 22/29 (75%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GV +QCDESL+PPG L RA EGR
Sbjct: 26 TNKNGVQRQCDESLLPPGVRLRRACWEGR 112
Score = 40.0 bits (81), Expect(4) = 1e-042
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 519 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 391
Score = 39.6 bits (80), Expect(3) = 2e-092
Identities = 15/26 (57%), Positives = 16/26 (61%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMAC NAMRA FLL C H K+
Sbjct: 33 KMACRGNAMRAFFLLAFVCAAHAGKD 110
Score = 38.2 bits (77), Expect(4) = 7e-085
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 696 RTSRPCGCRPCWG 658
Score = 37.3 bits (75), Expect(4) = 7e-085
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI ARH
Sbjct: 107 LPSMRGADERQEEEGSHRIASARH 36
Score = 34.5 bits (69), Expect(4) = 1e-042
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL +HAI
Sbjct: 112 ASFPACAAQTNARRKKALIALPLHAI 35
Score = 27.2 bits (53), Expect(4) = 1e-042
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 609 TGTRSCGRTW 580
Score = 24.4 bits (47), Expect(4) = 3e-039
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRA+ MR*EP
Sbjct: 34 KWRAEAMR*EP 66
>gb|CF488060.1|CF488060 POL1_47_C02.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_47_C02_A002 5', mRNA sequence
Length = 682
Score = 237 bits (511), Expect(3) = e-120
Identities = 91/101 (90%), Positives = 99/101 (98%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 378 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 557
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDS 691
L+N+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDS
Sbjct: 558 LVNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDS 680
Score = 207 bits (446), Expect(3) = e-112
Identities = 88/102 (86%), Positives = 91/102 (89%)
Frame = -3 / -1
Query: 693 DESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELG 514
DESPMWMPSVLGLSPGAVTVTSLI+MSLH FMWKNL +SV PDTSPLFT S TSELG
Sbjct: 682 DESPMWMPSVLGLSPGAVTVTSLINMSLHWNTFMWKNLAFTSVIPDTSPLFT*SSTSELG 503
Query: 513 RILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
RILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 502 RILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 377
Score = 189 bits (407), Expect(3) = e-120
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 129 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 308
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 309 CKGDVTIQVDGNLLATTDLSQYK 377
Score = 188 bits (404), Expect(3) = e-112
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 394 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 215
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 214 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 113
Score = 174 bits (375), Expect(3) = 1e-093
Identities = 74/98 (75%), Positives = 78/98 (79%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 380 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 559
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 560 GKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 673
Score = 168 bits (362), Expect(3) = 1e-093
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 131 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 310
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 311 QGRRDHPGGRQSAGDHGPEPVQG 379
Score = 154 bits (330), Expect(4) = 6e-086
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 659 VRVGAVPGRRDRHILNQHVLALEHVHVEELGVYQRDPGHLPVVHVVQHQRVGQDLAVVLL 480
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 479 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 369
Score = 146 bits (313), Expect(4) = 6e-086
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 383 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 204
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 203 LRAVLLAVAGGAQLADVERPARPGR 129
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 378 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 199
Query: 203 CCLS 192
CC S
Sbjct: 198 CCPS 187
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 373 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 507
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 253 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 378
Score = 53.3 bits (110), Expect(3) = e-112
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 96 PSQHARRRRTPGGRRLSSHCLCTP 25
Score = 46.9 bits (96), Expect(3) = e-120
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 14 TNKNGVHRQCDESLLPPGVRLRRACWEGR 100
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 115 AMRKRRPGLAGRSTSASWAPPATARRT 195
Score = 42.3 bits (86), Expect(3) = 1e-093
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 21 KMACTGNAMRAFFLLAFVCAAHAGKD 98
Score = 41.8 bits (85), Expect(4) = 6e-086
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 95 LPSMRGADERQEEEGSHRIACARH 24
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 507 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 379
Score = 36.3 bits (73), Expect(4) = 6e-086
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 689 SRPCGCHPCWG 657
SRPCGC PCWG
Sbjct: 678 SRPCGCRPCWG 646
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 100 ASFPACAAQTNARRKKALIALPVHAI 23
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 597 TGTRSCGRTW 568
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 22 KWRAQAMR*EP 54
>gb|CL196999.1|CL196999 104_423_10943444_114_32326_070 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10943444, DNA
sequence
Length = 699
Score = 419 bits (909), Expect(2) = e-116
Identities = 167/207 (80%), Positives = 187/207 (90%)
Frame = +2 / +1
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
+LV+DF NN VSG+TLLNSKFFHMN+++CK + IKDVTVTAPGDSPNTDGIH+GDSS +
Sbjct: 61 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 240
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTL
Sbjct: 241 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 420
Query: 881 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 1060
KKT GVRIK+YEDAA V+T SK+HYENI M+D ANPI IDMKYCPNK+CTA G SKVTV
Sbjct: 421 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTV 600
Query: 1061 KDVTFKNITGTSSTPEAVSLLCTAKVP 1141
KDVTFKNITGTSSTPEAVSLLC+ K P
Sbjct: 601 KDVTFKNITGTSSTPEAVSLLCSEKSP 681
Score = 336 bits (728), Expect = 6e-091
Identities = 153/206 (74%), Positives = 164/206 (79%)
Frame = -3 / -2
Query: 1140 GTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIF 961
G + QSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSM MGLA SS+ +F
Sbjct: 680 GDFSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMF 501
Query: 960 S*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVT 781
S*W LE V T AASS L+RTP +VFL VQSLTLMSVTSFSSLY PRLP LMPWPGPQVT
Sbjct: 500 S*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVT 321
Query: 780 PVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRY 601
PV +PGPMEMQSSPTPM V VMV +ESPMWMPSVLGLSPGAVTVTSLI LH
Sbjct: 320 PVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWN 141
Query: 600 MFMWKNLELSSVTPDTSPLFTKSITS 523
FMWKNLE S V P+T L KS T+
Sbjct: 140 TFMWKNLEFSRVIPETVALLQKSSTN 63
Score = 81.3 bits (171), Expect(3) = 1e-030
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = +1 / +3
Query: 526 GDGLREQRGGVRGHAAQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPH 681
G L +QR +R H A+LQVLPHE VPVQ DQGRDR ARGQPQH HPH
Sbjct: 66 GARLLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHPH 221
Score = 80.3 bits (169), Expect(4) = 2e-022
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = -2 / -1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRV 518
+ VGAVPGR GHVLD+H A HVHVEELGV+Q DPG VV EV HQR+
Sbjct: 210 VGVGAVPGRGDGHVLDRHAFALEHVHVEELGVQQGDPGDGGVVAEVEHQRL 58
Score = 75.3 bits (158), Expect(3) = 1e-030
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQVVYC 1035
ED RP Q +RGRR+R H LQ PLRE+ G QPH HRHEVLPQQ ++C
Sbjct: 423 EDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHEVLPQQDLHC 575
Score = 40.0 bits (81), Expect(4) = 2e-022
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 1034 QYTTCWGSTSCR*RWGW 984
Q +CWGSTSCR* WGW
Sbjct: 574 QCRSCWGSTSCR**WGW 524
Score = 26.3 bits (51), Expect(4) = 2e-022
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1 / -3
Query: 689 SRPCGCHPCWG 657
S CGC CWG
Sbjct: 229 SHQCGCRRCWG 197
Score = 23.5 bits (45), Expect(2) = e-116
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 1133 KVPCTGVTM 1159
K+PC+GVTM
Sbjct: 672 KIPCSGVTM 698
Score = 23.5 bits (45), Expect(4) = 2e-022
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 798 PGPQVTPVMFTLE 760
P P V PVM TLE
Sbjct: 269 PTPMVVPVMVTLE 231
Score = 22.6 bits (43), Expect(3) = 1e-030
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 758 TSKVNITGVTCGPG 799
+SKV ITG T G G
Sbjct: 229 SSKVTITGTTIGVG 270
>gb|CW270778.1|CW270778 104_742_11402626_148_35337_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402626, DNA
sequence
Length = 671
Score = 414 bits (899), Expect = e-114
Identities = 165/202 (81%), Positives = 184/202 (91%)
Frame = +2 / +1
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
+LV+DF NN VSG+TLLNSKFFHMN+++CK + IKDVTVTAPGDSPNTDGIH+GDSS +
Sbjct: 64 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 243
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTL
Sbjct: 244 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 423
Query: 881 KKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTV 1060
KKT GVRIK+YEDAA V+T SK+HYENI M+D ANPI IDMKYCPNK+CTA G SKVTV
Sbjct: 424 KKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTV 603
Query: 1061 KDVTFKNITGTSSTPEAVSLLC 1126
KDVTFKNITGTSSTPEAVSLLC
Sbjct: 604 KDVTFKNITGTSSTPEAVSLLC 669
Score = 334 bits (724), Expect = 2e-090
Identities = 152/201 (75%), Positives = 162/201 (80%)
Frame = -3 / -1
Query: 1125 QSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WIL 946
QSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSM MGLA SS+ +FS*W L
Sbjct: 668 QSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS*WSL 489
Query: 945 ETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFT 766
E V T AASS L+RTP +VFL VQSLTLMSVTSFSSLY PRLP LMPWPGPQVTPV
Sbjct: 488 EAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLI 309
Query: 765 LEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWK 586
+PGPMEMQSSPTPM V VMV +ESPMWMPSVLGLSPGAVTVTSLI LH FMWK
Sbjct: 308 PVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWK 129
Query: 585 NLELSSVTPDTSPLFTKSITS 523
NLE S V P+T L KS T+
Sbjct: 128 NLEFSRVIPETVALLQKSSTN 66
Score = 81.3 bits (171), Expect(3) = 1e-030
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = +1 / +3
Query: 526 GDGLREQRGGVRGHAAQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPH 681
G L +QR +R H A+LQVLPHE VPVQ DQGRDR ARGQPQH HPH
Sbjct: 69 GARLLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHPH 224
Score = 80.3 bits (169), Expect(4) = 1e-022
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRV 518
+ VGAVPGR GHVLD+H A HVHVEELGV+Q DPG VV EV HQR+
Sbjct: 213 VGVGAVPGRGDGHVLDRHAFALEHVHVEELGVQQGDPGDGGVVAEVEHQRL 61
Score = 75.3 bits (158), Expect(3) = 1e-030
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQVVYC 1035
ED RP Q +RGRR+R H LQ PLRE+ G QPH HRHEVLPQQ ++C
Sbjct: 426 EDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHEVLPQQDLHC 578
Score = 40.0 bits (81), Expect(4) = 1e-022
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 1034 QYTTCWGSTSCR*RWGW 984
Q +CWGSTSCR* WGW
Sbjct: 577 QCRSCWGSTSCR**WGW 527
Score = 26.3 bits (51), Expect(4) = 1e-022
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1 / -2
Query: 689 SRPCGCHPCWG 657
S CGC CWG
Sbjct: 232 SHQCGCRRCWG 200
Score = 23.5 bits (45), Expect(4) = 1e-022
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / -1
Query: 798 PGPQVTPVMFTLE 760
P P V PVM TLE
Sbjct: 272 PTPMVVPVMVTLE 234
Score = 22.6 bits (43), Expect(3) = 1e-030
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 758 TSKVNITGVTCGPG 799
+SKV ITG T G G
Sbjct: 232 SSKVTITGTTIGVG 273
>gb|CL155265.1|CL155265 104_341_10782005_114_31471_101 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10782005, DNA
sequence
Length = 706
Score = 215 bits (464), Expect(3) = e-113
Identities = 83/92 (90%), Positives = 90/92 (97%)
Frame = +2 / +1
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 430 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 609
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPN 664
LLN+KFFHMN+++CKDMLIKDVTVTAPGDSPN
Sbjct: 610 LLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPN 705
Score = 189 bits (407), Expect(3) = e-113
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 181 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 360
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 361 CKGDVTIQVDGNLLATTDLSQYK 429
Score = 188 bits (404), Expect(3) = e-105
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -3
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 446 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 267
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 266 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 165
Score = 182 bits (391), Expect(3) = e-105
Identities = 79/92 (85%), Positives = 81/92 (88%)
Frame = -3 / -3
Query: 663 LGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQ 484
LGLSPGAVTVTSLI+MSLH FMWKNL SSV PDTSPLFT S TSELGRILQSYFL
Sbjct: 704 LGLSPGAVTVTSLINMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAH 525
Query: 483 EFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 524 EFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 429
Score = 168 bits (362), Expect(3) = 1e-087
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 183 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 362
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 363 QGRRDHPGGRQSAGDHGPEPVQG 431
Score = 154 bits (331), Expect(3) = 1e-087
Identities = 68/91 (74%), Positives = 72/91 (79%)
Frame = +1 / +3
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 432 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 611
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQ 663
A+ QVLPHE VPVQGH D D GARGQPQ
Sbjct: 612 AKRQVLPHERVPVQGHVD*RCDGHGARGQPQ 704
Score = 147 bits (316), Expect(3) = 9e-079
Identities = 62/95 (65%), Positives = 71/95 (74%)
Frame = -2 / -2
Query: 664 VGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXXXX 485
VGAVPGRR H+ +QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 705 VGAVPGRRDRHIFNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLLGA 526
Query: 484 XXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 525 RVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 421
Score = 146 bits (313), Expect(3) = 9e-079
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -2
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 435 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 256
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 255 LRAVLLAVAGGAQLADVERPARPGR 181
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -1
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 430 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 251
Query: 203 CCLS 192
CC S
Sbjct: 250 CCPS 239
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 425 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 559
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 305 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 430
Score = 53.3 bits (110), Expect(3) = e-105
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 148 PSQHARRRRTPGGRRLSSHCLCTP 77
Score = 46.9 bits (96), Expect(3) = e-113
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 66 TNKNGVHRQCDESLLPPGVRLRRACWEGR 152
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 167 AMRKRRPGLAGRSTSASWAPPATARRT 247
Score = 42.3 bits (86), Expect(3) = 1e-087
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 73 KMACTGNAMRAFFLLAFVCAAHAGKD 150
Score = 41.8 bits (85), Expect(3) = 9e-079
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -2
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 147 LPSMRGADERQEEEGSHRIACARH 76
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -1
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 559 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 431
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 152 ASFPACAAQTNARRKKALIALPVHAI 75
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 649 TGTRSCGRTW 620
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 74 KWRAQAMR*EP 106
>gb|CW463315.1|CW463315 fsbb001f211n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f211n16, DNA
sequence
Length = 695
Score = 211 bits (455), Expect(3) = e-112
Identities = 81/91 (89%), Positives = 89/91 (97%)
Frame = +2 / +1
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 421 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 600
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSP 661
L+N+KFFHMN+++CKDMLIKDVTVTAPGDSP
Sbjct: 601 LVNAKFFHMNVFQCKDMLIKDVTVTAPGDSP 693
Score = 189 bits (407), Expect(3) = e-112
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 172 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 351
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 352 CKGDVTIQVDGNLLATTDLSQYK 420
Score = 188 bits (404), Expect(3) = e-104
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 437 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 258
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 257 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 156
Score = 180 bits (388), Expect(3) = e-104
Identities = 78/92 (84%), Positives = 81/92 (88%)
Frame = -3 / -1
Query: 663 LGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQ 484
LGLSPGAVTVTSLI+MSLH FMWKNL +SV PDTSPLFT S TSELGRILQSYFL
Sbjct: 695 LGLSPGAVTVTSLINMSLHWNTFMWKNLAFTSVIPDTSPLFT*SSTSELGRILQSYFLAH 516
Query: 483 EFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 515 EFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 420
Score = 168 bits (362), Expect(3) = 3e-088
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 174 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 353
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 354 QGRRDHPGGRQSAGDHGPEPVQG 422
Score = 156 bits (335), Expect(3) = 3e-088
Identities = 68/91 (74%), Positives = 72/91 (79%)
Frame = +1 / +3
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 423 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 602
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQ 663
+ QVLPHE VPVQGH D G D GARGQPQ
Sbjct: 603 GKRQVLPHERVPVQGHVD*GCDGHGARGQPQ 695
Score = 148 bits (318), Expect(3) = 5e-079
Identities = 62/94 (65%), Positives = 71/94 (75%)
Frame = -2 / -3
Query: 661 GAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXXXXX 482
GAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 693 GAVPGRRDRHILNQHVLALEHVHVEELGVYQRDPGHLPVVHVVQHQRVGQDLAVVLLGAR 514
Query: 481 XXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 513 VLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 412
Score = 146 bits (313), Expect(3) = 5e-079
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 426 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 247
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 246 LRAVLLAVAGGAQLADVERPARPGR 172
Score = 132 bits (283), Expect(4) = 1e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 421 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 242
Query: 203 CCLS 192
CC S
Sbjct: 241 CCPS 230
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 416 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 550
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +2
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 296 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 421
Score = 53.3 bits (110), Expect(3) = e-104
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 139 PSQHARRRRTPGGRRLSSHCLCTP 68
Score = 46.9 bits (96), Expect(3) = e-112
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 57 TNKNGVHRQCDESLLPPGVRLRRACWEGR 143
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 158 AMRKRRPGLAGRSTSASWAPPATARRT 238
Score = 42.3 bits (86), Expect(3) = 3e-088
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 64 KMACTGNAMRAFFLLAFVCAAHAGKD 141
Score = 41.8 bits (85), Expect(3) = 5e-079
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 138 LPSMRGADERQEEEGSHRIACARH 67
Score = 40.0 bits (81), Expect(4) = 1e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 550 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 422
Score = 35.9 bits (72), Expect(4) = 1e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 143 ASFPACAAQTNARRKKALIALPVHAI 66
Score = 27.2 bits (53), Expect(4) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 640 TGTRSCGRTW 611
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 65 KWRAQAMR*EP 97
>gb|CF488665.1|CF488665 POL1_51_A10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_51_A10_A002 5', mRNA sequence
Length = 651
Score = 245 bits (530), Expect(4) = e-111
Identities = 95/105 (90%), Positives = 102/105 (97%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 335 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 514
Query: 569 LLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGIT 703
LLN+KFFHMN++ CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+T
Sbjct: 515 LLNAKFFHMNVFXCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVT 649
Score = 211 bits (455), Expect(4) = e-102
Identities = 91/106 (85%), Positives = 93/106 (87%)
Frame = -3 / -1
Query: 705 MVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSIT 526
MV PDESPMWMPSVLGLSPGAVTVTSLI+MSL FMWKNL SSV PDTSPLFT S T
Sbjct: 651 MVTPDESPMWMPSVLGLSPGAVTVTSLINMSLXWNTFMWKNLAFSSVIPDTSPLFT*SST 472
Query: 525 SELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQLP 388
SELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLSTRRISIQLP
Sbjct: 471 SELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLSTRRISIQLP 334
Score = 174 bits (374), Expect(4) = 4e-082
Identities = 74/98 (75%), Positives = 78/98 (79%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 337 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 516
Query: 571 AQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
A+ QVLPHE VP QGH D G D GARGQPQHG HPHG
Sbjct: 517 AKRQVLPHERVPXQGHVD*GCDGHGARGQPQHGRHPHG 630
Score = 153 bits (329), Expect(5) = 5e-080
Identities = 64/97 (65%), Positives = 74/97 (76%)
Frame = -2 / -3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXX 491
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 616 VRVGAVPGRRDRHILNQHVLAXEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLL 437
Query: 490 XXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMVL 380
APHG ALPV++ LAGD QV+H +LDP+T+VL
Sbjct: 436 GARVLAPHGGALPVELPLAGDHQVVHTQDLDPVTLVL 326
Score = 118 bits (252), Expect(4) = e-102
Identities = 47/57 (82%), Positives = 49/57 (85%)
Frame = -3 / -2
Query: 288 TRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
TR SPLGMRIVCFPVPPHAD HASCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 239 TR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 69
Score = 117 bits (250), Expect(4) = e-111
Identities = 49/63 (77%), Positives = 53/63 (84%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LV P
Sbjct: 85 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVCISQLHRP 264
Query: 314 CKG 322
+G
Sbjct: 265 VQG 273
Score = 94.5 bits (200), Expect(4) = 4e-082
Identities = 37/50 (74%), Positives = 42/50 (84%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLP 285
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP
Sbjct: 87 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLP 236
Score = 90.0 bits (190), Expect(5) = 5e-080
Identities = 40/53 (75%), Positives = 43/53 (81%)
Frame = -2 / -1
Query: 292 SDKEVALGYEDCLLPSAAARRCPCLLHSLRAVCLAIAGGAQLGDVEGPTRPGR 134
+D+ VAL ED LLP AAARR PCLLHSLRAV LA+AGGAQL DVE P RPGR
Sbjct: 243 TDEVVALRDEDRLLPGAAARRRPCLLHSLRAVLLAVAGGAQLADVERPARPGR 85
Score = 75.3 bits (158), Expect(3) = 2e-033
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 330 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 464
Score = 73.0 bits (153), Expect(4) = e-111
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +2 / +2
Query: 296 LNFTGPCKGDVTIQVDGNLLATTDLSQYK 382
LNFTGPCKGDVTIQVDGNLLATTDLSQYK
Sbjct: 248 LNFTGPCKGDVTIQVDGNLLATTDLSQYK 334
Score = 72.1 bits (151), Expect(4) = e-102
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVR 288
PCTG GPWSPADC PPGWSRRPC G *S* ++
Sbjct: 335 PCTGSGPWSPADCRPPGWSRRPCTGR*S*EIQ 240
Score = 72.1 bits (151), Expect(4) = 4e-082
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +1 / +1
Query: 295 TQLHRPLQGRRDHPGGWQSAGDHGPKPVQG 384
+QLHRP+QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 247 SQLHRPVQGRRDHPGGRQSAGDHGPEPVQG 336
Score = 68.9 bits (144), Expect(5) = 5e-080
Identities = 28/34 (82%), Positives = 29/34 (85%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKL 298
I + LYWLRSVVASRLPSTWMVTSPL GPVKL
Sbjct: 351 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKL 250
Score = 61.6 bits (128), Expect(3) = 2e-033
Identities = 26/29 (89%), Positives = 26/29 (89%)
Frame = +3 / +3
Query: 297 STSQALARAT*PSRWMAICWRPRT*ASTR 383
STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 249 STSPARARAT*PSRWTAICWRPRT*ASTR 335
Score = 60.6 bits (126), Expect(4) = 1e-028
Identities = 25/33 (75%), Positives = 27/33 (81%)
Frame = -1 / -3
Query: 290 RQGSRPWV*GLSASQCRRTPMPMPPAQPSCCLS 192
R+GSRP *G SAS+CRRTP MPPAQPSCC S
Sbjct: 241 RRGSRP*G*GSSASRCRRTPTSMPPAQPSCCPS 143
Score = 58.8 bits (122), Expect(4) = 1e-028
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVE 296
+ LVLA VRGRQQIA+HLDGHVALARA EVE
Sbjct: 340 VTLVLAQVRGRQQIAVHLDGHVALARAGEVE 248
Score = 46.4 bits (95), Expect(3) = 2e-033
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +2
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 71 AMRKRRPGLAGRSTSASWAPPATARRT 151
Score = 40.0 bits (81), Expect(4) = 1e-028
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 464 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 336
Score = 38.2 bits (77), Expect(5) = 5e-080
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 641 RTSRPCGCRPCWG 603
Score = 32.2 bits (64), Expect(4) = e-102
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLS 57
PS HAR RR PGG RLS
Sbjct: 52 PSQHARRRRTPGGRRLS 2
Score = 27.2 bits (53), Expect(4) = e-111
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / +3
Query: 58 ESLVPPGPLLHRAW*EGR 111
ESL+PPG L RA EGR
Sbjct: 3 ESLLPPGVRLRRACWEGR 56
Score = 25.8 bits (50), Expect(5) = 5e-080
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSH 56
L +M A+E QEE+GSH
Sbjct: 51 LPSMRGADERQEEEGSH 1
Score = 24.9 bits (48), Expect(4) = 1e-028
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / -2
Query: 605 GTCSCGRTW 579
GT SCGRTW
Sbjct: 551 GTRSCGRTW 525
Score = 24.9 bits (48), Expect(4) = 4e-082
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +2 / +1
Query: 56 MRALFLLVLFCIVHGEKE 109
MRA FLL C H K+
Sbjct: 1 MRAFFLLAFVCAAHAGKD 54
>gb|CF485801.1|CF485801 POL1_33_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 5', mRNA sequence
Length = 663
Score = 336 bits (727), Expect(3) = e-110
Identities = 134/147 (91%), Positives = 142/147 (96%)
Frame = +2 / +3
Query: 593 MNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVN 772
MN+++CKDMLIKDVTVTAPGDSPNTDGIHMGDSSG+TI NTVIGVGDDCISIGPGT+KVN
Sbjct: 222 MNVFQCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVN 401
Query: 773 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKI 952
ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAASVLT SKI
Sbjct: 402 ITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKI 581
Query: 953 HYENIKMEDSANPIFIDMKYCPNKLCT 1033
HYENIKMEDS+NPI IDMKYCPNK+CT
Sbjct: 582 HYENIKMEDSSNPIIIDMKYCPNKICT 662
Score = 284 bits (614), Expect(3) = 7e-099
Identities = 124/147 (84%), Positives = 128/147 (87%)
Frame = -3 / -3
Query: 1032 VHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMS 853
V LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYAL+R P +VF VQS TLMS
Sbjct: 661 VQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMS 482
Query: 852 VTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWM 673
VTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV PDESPMWM
Sbjct: 481 VTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWM 302
Query: 672 PSVLGLSPGAVTVTSLISMSLHRYMFM 592
PSVLGLSPGAVTVTSLI+MSLH FM
Sbjct: 301 PSVLGLSPGAVTVTSLINMSLHWNTFM 221
Score = 91.8 bits (194), Expect(5) = 2e-050
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +2
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 512 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 652
Score = 71.2 bits (149), Expect(3) = 7e-099
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = -3 / -2
Query: 225 HASCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
HASCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 224 HASCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 117
Score = 65.2 bits (136), Expect(3) = e-110
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEA 223
ASGPGGSFDI+KLGASG+GK DSTKAVQEA
Sbjct: 133 ASGPGGSFDISKLGASGDGKKDSTKAVQEA 222
Score = 63.8 bits (133), Expect(5) = 2e-050
Identities = 24/31 (77%), Positives = 24/31 (77%)
Frame = +1 / +2
Query: 592 HEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
HE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 221 HERVPVQGHVD*GCDGHGARGQPQHGRHPHG 313
Score = 61.6 bits (128), Expect(6) = 3e-037
Identities = 25/30 (83%), Positives = 26/30 (86%)
Frame = -2 / -1
Query: 223 CLLHSLRAVCLAIAGGAQLGDVEGPTRPGR 134
CLLHSLRAV LA+AGGAQL DVE P RPGR
Sbjct: 222 CLLHSLRAVLLAVAGGAQLADVERPARPGR 133
Score = 61.6 bits (128), Expect(5) = 2e-050
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGI 231
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +
Sbjct: 135 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMNV 230
Score = 53.3 bits (110), Expect(3) = 7e-099
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 100 PSQHARRRRTPGGRRLSSHCLCTP 29
Score = 49.6 bits (102), Expect(6) = 3e-037
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -2 / -2
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVH 593
+RVGAVPGRR H+L+QHVLA HVH
Sbjct: 299 VRVGAVPGRRDRHILNQHVLALEHVH 222
Score = 46.9 bits (96), Expect(3) = e-110
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 18 TNKNGVHRQCDESLLPPGVRLRRACWEGR 104
Score = 42.3 bits (86), Expect(5) = 2e-050
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 25 KMACTGNAMRAFFLLAFVCAAHAGKD 102
Score = 41.8 bits (85), Expect(6) = 3e-037
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 99 LPSMRGADERQEEEGSHRIACARH 28
Score = 38.2 bits (77), Expect(6) = 3e-037
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -1
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 324 RTSRPCGCRPCWG 286
Score = 37.3 bits (75), Expect(6) = 3e-037
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 566 EHGGGVLVRLDPEAVARLLQRTV 498
Score = 26.7 bits (52), Expect(6) = 3e-037
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 651 C*GSTSCR**WG 616
Score = 24.0 bits (46), Expect(5) = 2e-050
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 386 DNQGEHHRRHM 418
>gb|BG322873.1|BG322873 EM1_15_B11.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 580
Score = 397 bits (861), Expect = e-109
Identities = 157/190 (82%), Positives = 174/190 (91%)
Frame = +2 / +1
Query: 626 KDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHG 805
KDVTVTAPGDSPNTDGIH+GDSS +TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHG
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 806 ISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSA 985
IS+GSLGRYKDEKDVTDINVKDCTLKKT GVRIK+YEDAA V+T SK+HYENI M+D A
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 986 NPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDD 1165
NPI IDMKYCPNK+CTA G SKVTVKDVTFKNITGTSSTPEAVSLLC+ K+PC+GVTMD+
Sbjct: 370 NPIIIDMKYCPNKICTAKGDSKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPCSGVTMDN 549
Query: 1166 VNVEYSGTNN 1195
+ VEY GTNN
Sbjct: 550 IKVEYKGTNN 579
Score = 331 bits (717), Expect = 2e-089
Identities = 150/190 (78%), Positives = 160/190 (84%)
Frame = -3 / -3
Query: 1194 LLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLG 1015
LLVPLYSTL SMVTP+ G L+ QSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLG
Sbjct: 578 LLVPLYSTLMLSMVTPLQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLG 399
Query: 1014 QYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSS 835
QYFMSM MGLA SS+ +FS*W LE V T AASS L+RTP +VFL VQSLTLMSVTSFSS
Sbjct: 398 QYFMSMMMGLATSSMAMFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSS 219
Query: 834 LYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGL 655
LY PRLP LMPWPGPQVTPV +PGPMEMQSSPTPM V VMV +ESPMWMPSVLGL
Sbjct: 218 LYLPRLPTLMPWPGPQVTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGL 39
Query: 654 SPGAVTVTSL 625
SPGAVTVTSL
Sbjct: 38 SPGAVTVTSL 9
Score = 75.3 bits (158), Expect(4) = 2e-023
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQVVYC 1035
ED RP Q +RGRR+R H LQ PLRE+ G QPH HRHEVLPQQ ++C
Sbjct: 267 EDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHEVLPQQDLHC 419
Score = 40.5 bits (82), Expect(4) = 2e-023
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / +3
Query: 625 QGRDRDGARGQPQHGWHPH 681
QGRDR ARGQPQH HPH
Sbjct: 9 QGRDRHRARGQPQHRRHPH 65
Score = 33.6 bits (67), Expect(4) = 2e-023
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = +3 / +2
Query: 1137 SHAPASPWMTSTSSIAAPTT 1196
S A ASPW+TS SS APTT
Sbjct: 521 SPAAASPWITSRSSTRAPTT 580
Score = 22.6 bits (43), Expect(4) = 2e-023
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 758 TSKVNITGVTCGPG 799
+SKV ITG T G G
Sbjct: 73 SSKVTITGTTIGVG 114
>gb|BZ423602.1|BZ423602 id51c01.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone id51c01 5', DNA sequence
Length = 574
Score = 394 bits (854), Expect = e-108
Identities = 156/191 (81%), Positives = 173/191 (90%)
Frame = +2 / +1
Query: 533 DFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITN 712
DF NN VSG+TLLNSKFFHMN+++CK + IKDVTVTAPGDSPNTDGIH+GDSS +TIT
Sbjct: 1 DFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKVTITG 180
Query: 713 TVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTM 892
T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTLKKT
Sbjct: 181 TTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTLKKTS 360
Query: 893 FGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVT 1072
GVRIK+YEDAA V+T SK+HYENI M+D ANPI IDMKYCPNK+CTA G SKVTVKDVT
Sbjct: 361 NGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKICTAKGDSKVTVKDVT 540
Query: 1073 FKNITGTSSTP 1105
FKNITGTSSTP
Sbjct: 541 FKNITGTSSTP 573
Score = 316 bits (685), Expect = 5e-085
Identities = 143/190 (75%), Positives = 152/190 (80%)
Frame = -3 / -3
Query: 1104 GVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEA 925
GV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSM MGLA SS+ +FS*W LE V T A
Sbjct: 572 GVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS*WSLEAVITHA 393
Query: 924 ASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPM 745
ASS L+RTP +VFL VQSLTLMSVTSFSSLY PRLP LMPWPGPQVTPV +PGPM
Sbjct: 392 ASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPM 213
Query: 744 EMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSV 565
EMQSSPTPM V VMV +ESPMWMPSVLGLSPGAVTVTSLI LH FMWKNLE S V
Sbjct: 212 EMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRV 33
Query: 564 TPDTSPLFTK 535
P+T L K
Sbjct: 32 IPETVALLQK 3
Score = 80.3 bits (169), Expect(3) = 2e-030
Identities = 33/49 (67%), Positives = 36/49 (73%)
Frame = +1 / +3
Query: 535 LREQRGGVRGHAAQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPH 681
L +QR +R H A+LQVLPHE VPVQ DQGRDR ARGQPQH HPH
Sbjct: 3 LLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHPH 149
Score = 75.3 bits (158), Expect(3) = 2e-030
Identities = 31/51 (60%), Positives = 36/51 (70%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQVVYC 1035
ED RP Q +RGRR+R H LQ PLRE+ G QPH HRHEVLPQQ ++C
Sbjct: 351 EDQQWRPDQVLRGRRVRDHCLQAPLREHSHGRRGQPHHHRHEVLPQQDLHC 503
Score = 22.6 bits (43), Expect(3) = 2e-030
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / +1
Query: 758 TSKVNITGVTCGPG 799
+SKV ITG T G G
Sbjct: 157 SSKVTITGTTIGVG 198
>gb|CF480173.1|CF480173 POL1_64_D11.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_64_D11_A002 3', mRNA sequence
Length = 637
Score = 393 bits (853), Expect = e-108
Identities = 158/181 (87%), Positives = 171/181 (94%)
Frame = +2 / +2
Query: 728 GDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRI 907
GDDCISIGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RI
Sbjct: 2 GDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRI 181
Query: 908 KAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNIT 1087
KAYEDAASVLT SKIHYENIKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+T
Sbjct: 182 KAYEDAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVT 361
Query: 1088 GTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF* 1267
GTS++PEAVSLLC+ K+PCTGVTMD+V VEYSG NNKTMA+C NAKGS GCLKELACF*
Sbjct: 362 GTSASPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF* 541
Query: 1268 T 1270
T
Sbjct: 542 T 544
Score = 334 bits (723), Expect = 3e-090
Identities = 150/181 (82%), Positives = 157/181 (86%)
Frame = -3 / -2
Query: 1269 V*KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEV 1090
V*KHASSLRQP+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EV
Sbjct: 543 V*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEV 364
Query: 1089 PVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYA 910
PV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYA
Sbjct: 363 PVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYA 184
Query: 909 LMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSS 730
L+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSS
Sbjct: 183 LIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSS 4
Query: 729 P 727
P
Sbjct: 3 P 1
Score = 91.8 bits (194), Expect(3) = 6e-037
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +1
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 157 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 297
Score = 89.5 bits (189), Expect(3) = 1e-024
Identities = 39/53 (73%), Positives = 43/53 (81%)
Frame = -2 / -1
Query: 1270 GLEACKLLEATLGAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GLEAC+LLEA GAALGV AY HGLVV A +LD+DVIHGDA A DL AEQA+
Sbjct: 544 GLEACELLEAACGAALGVLAYGHGLVVFATVLDLDVIHGDASAGDLVGAEQAD 386
Score = 79.4 bits (167), Expect(3) = 6e-037
Identities = 33/45 (73%), Positives = 36/45 (80%)
Frame = +3 / +3
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAPRVASRSLHASRP 1271
S A ASPW+TS SS A TTRPW YA+TPRAAP+ ASRS HASRP
Sbjct: 411 SPALASPWITSRSSTVAKTTRPWPYAKTPRAAPQAASRSSHASRP 545
Score = 37.3 bits (75), Expect(3) = 1e-024
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -1
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 211 EHGGGVLVRLDPEAVARLLQRTV 143
Score = 26.7 bits (52), Expect(3) = 1e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 296 C*GSTSCR**WG 261
Score = 24.0 bits (46), Expect(3) = 6e-037
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +1
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 31 DNQGEHHRRHM 63
>gb|CF486111.1|CF486111 POL1_35_F09.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 5', mRNA sequence
Length = 645
Score = 189 bits (407), Expect(4) = e-106
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +2
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 131 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 310
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 311 CKGDVTIQVDGNLLATTDLSQYK 379
Score = 188 bits (404), Expect(4) = 4e-098
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 396 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 217
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 216 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 115
Score = 168 bits (362), Expect(4) = 5e-082
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +1
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 133 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 312
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 313 QGRRDHPGGRQSAGDHGPEPVQG 381
Score = 166 bits (356), Expect(4) = e-106
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSCTKKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 380 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCTKKYDCKILPNSLVLDYVNNGEVSGIT 559
Query: 569 LLNSKFFHM 595
LLN+KFFHM
Sbjct: 560 LLNAKFFHM 586
Score = 146 bits (313), Expect(3) = 1e-067
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 385 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 206
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 205 LRAVLLAVAGGAQLADVERPARPGR 131
Score = 144 bits (308), Expect(4) = 4e-098
Identities = 61/69 (88%), Positives = 62/69 (89%)
Frame = -3 / -1
Query: 594 MWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLS 415
MWKNL SSV PDTSPLFT S TSELGRILQSYFLV EFLLHTAGPCPS FPLPV+TRLS
Sbjct: 585 MWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLVHEFLLHTAGPCPSSFPLPVITRLS 406
Query: 414 TRRISIQLP 388
TRRISIQLP
Sbjct: 405 TRRISIQLP 379
Score = 132 bits (283), Expect(3) = 7e-041
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 380 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 201
Query: 203 CCLS 192
CC S
Sbjct: 200 CCPS 189
Score = 122 bits (262), Expect(4) = 5e-082
Identities = 53/68 (77%), Positives = 57/68 (83%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+HQEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 382 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVHQEVRLQDPAQLAGAGLREQRGGVRDHA 561
Query: 571 AQLQVLPH 594
A+ QVLPH
Sbjct: 562 AKRQVLPH 585
Score = 110 bits (234), Expect(3) = 1e-067
Identities = 46/72 (63%), Positives = 53/72 (73%)
Frame = -2 / -3
Query: 595 HVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXXXXXXXAPHGWALPVKVSLAGDDQVI 416
HVEELGV QRDPGHLPVVH V HQRVG+D APHG ALPV++ LAGD QV+
Sbjct: 586 HVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVV 407
Query: 415 HA*NLDPITMVL 380
H +LDP+T+VL
Sbjct: 406 HTQDLDPVTLVL 371
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 375 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 509
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 255 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 380
Score = 53.3 bits (110), Expect(4) = 4e-098
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 98 PSQHARRRRTPGGRRLSSHCLCTP 27
Score = 46.9 bits (96), Expect(4) = e-106
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 16 TNKNGVHRQCDESLLPPGVRLRRACWEGR 102
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 117 AMRKRRPGLAGRSTSASWAPPATARRT 197
Score = 44.1 bits (90), Expect(4) = e-106
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +2 / +3
Query: 596 NMYRCKDMLIKDVTVTAPG 652
N+++CKDMLIKDVTVTAPG
Sbjct: 588 NVFQCKDMLIKDVTVTAPG 644
Score = 42.3 bits (86), Expect(4) = 5e-082
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 23 KMACTGNAMRAFFLLAFVCAAHAGKD 100
Score = 41.8 bits (85), Expect(3) = 1e-067
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 97 LPSMRGADERQEEEGSHRIACARH 26
Score = 40.0 bits (81), Expect(3) = 7e-041
Identities = 26/72 (36%), Positives = 32/72 (44%)
Frame = -3 / -3
Query: 651 PGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLL 472
PGAVTVTSLI+MSLH F + L + P P+ +G+ L L L
Sbjct: 643 PGAVTVTSLINMSLHWNTFHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLA 464
Query: 471 HTAGPCPSRFPL 436
G P PL
Sbjct: 463 PHGGALPVELPL 428
Score = 35.9 bits (72), Expect(3) = 7e-041
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 102 ASFPACAAQTNARRKKALIALPVHAI 25
Score = 34.1 bits (68), Expect(4) = 4e-098
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 652 PGRRHGHVLDQHVLAPVHV 596
PGRR H+L+QHVLA HV
Sbjct: 644 PGRRDRHILNQHVLALEHV 588
Score = 31.3 bits (62), Expect(4) = 5e-082
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +1 / +2
Query: 595 EHVPVQGHADQGRDRDGAR 651
E VPVQGH D G D GAR
Sbjct: 587 ERVPVQGHVD*GCDGHGAR 643
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 24 KWRAQAMR*EP 56
>gb|CF487334.1|CF487334 POL1_43_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_D12_A002 3', mRNA sequence
Length = 637
Score = 381 bits (826), Expect = e-104
Identities = 154/177 (87%), Positives = 167/177 (94%)
Frame = +2 / +1
Query: 740 ISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYE 919
ISIGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYE
Sbjct: 1 ISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYE 180
Query: 920 DAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSS 1099
DAASVLT SKIHYENIKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS+
Sbjct: 181 DAASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSA 360
Query: 1100 TPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF*T 1270
+PEAVSLLC+ K+PCTGVTMD+V VEYSG NNKTMA+C NAKGS GCLKELACF*T
Sbjct: 361 SPEAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*T 531
Score = 322 bits (698), Expect = 8e-087
Identities = 145/176 (82%), Positives = 152/176 (86%)
Frame = -3 / -3
Query: 1269 V*KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEV 1090
V*KHASSLRQP+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EV
Sbjct: 530 V*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEV 351
Query: 1089 PVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYA 910
PV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYA
Sbjct: 350 PVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYA 171
Query: 909 LMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPME 742
L+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPME
Sbjct: 170 LIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPME 3
Score = 91.8 bits (194), Expect(3) = 1e-036
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 144 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 284
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -2 / -2
Query: 1270 GLEACKLLEATLGAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GLEAC+LLEA GAALGV AY HGLVV A + D+DVIHGDA A DL AEQA+
Sbjct: 531 GLEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQAD 373
Score = 78.0 bits (164), Expect(3) = 1e-036
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3 / +2
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAPRVASRSLHASRP 1271
S A ASPW+TS S+ A TTRPW YA+TPRAAP+ ASRS HASRP
Sbjct: 398 SPALASPWITSRSNTVAKTTRPWPYAKTPRAAPQAASRSSHASRP 532
Score = 37.3 bits (75), Expect(3) = 4e-024
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 198 EHGGGVLVRLDPEAVARLLQRTV 130
Score = 26.7 bits (52), Expect(3) = 4e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 283 C*GSTSCR**WG 248
Score = 24.0 bits (46), Expect(3) = 1e-036
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 18 DNQGEHHRRHM 50
>gb|CF489185.1|CF489185 POL1_55_F02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_55_F02_A002 3', mRNA sequence
Length = 619
Score = 377 bits (818), Expect = e-103
Identities = 152/175 (86%), Positives = 165/175 (94%)
Frame = +2 / +3
Query: 746 IGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDA 925
IGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDA
Sbjct: 3 IGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDA 182
Query: 926 ASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTP 1105
ASVLT SKIHYENIKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++P
Sbjct: 183 ASVLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASP 362
Query: 1106 EAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF*T 1270
EAVSLLC+ K+PCTGVTMD+V VEYSG NNKTMA+C NAKGS GCLKELACF*T
Sbjct: 363 EAVSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*T 527
Score = 320 bits (693), Expect = 4e-086
Identities = 144/175 (82%), Positives = 151/175 (86%)
Frame = -3 / -1
Query: 1269 V*KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEV 1090
V*KHASSLRQP+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EV
Sbjct: 526 V*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEV 347
Query: 1089 PVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYA 910
PV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYA
Sbjct: 346 PVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYA 167
Query: 909 LMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPM 745
L+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPM
Sbjct: 166 LIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPM 2
Score = 91.8 bits (194), Expect(3) = 9e-036
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +2
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 140 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 280
Score = 85.8 bits (181), Expect(3) = 3e-023
Identities = 37/53 (69%), Positives = 42/53 (79%)
Frame = -2 / -3
Query: 1270 GLEACKLLEATLGAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GL+AC+LLEA GAALGV AY HGLVV A + D+DVIHGDA A DL AEQA+
Sbjct: 527 GLKACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQAD 369
Score = 75.3 bits (158), Expect(3) = 9e-036
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +3 / +1
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAPRVASRSLHASRP 1271
S A ASPW+TS S+ A TTRPW YA+TPRAAP+ ASRS HA RP
Sbjct: 394 SPALASPWITSRSNTVAKTTRPWPYAKTPRAAPQAASRSSHAFRP 528
Score = 35.9 bits (72), Expect(3) = 3e-023
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -2 / -3
Query: 937 EHGGGVLVRLDADAEHRLL 881
EHGGGVLVRLD +A RLL
Sbjct: 194 EHGGGVLVRLDPEAVARLL 138
Score = 26.7 bits (52), Expect(3) = 3e-023
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 279 C*GSTSCR**WG 244
Score = 24.0 bits (46), Expect(3) = 9e-036
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +2
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 14 DNQGEHHRRHM 46
>gb|CF483650.1|CF483650 POL1_23_F06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_23_F06_A002 5', mRNA sequence
Length = 616
Score = 189 bits (407), Expect(3) = e-103
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 132 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 311
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 312 CKGDVTIQVDGNLLATTDLSQYK 380
Score = 188 bits (404), Expect(3) = 1e-095
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 397 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 218
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 217 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 116
Score = 180 bits (387), Expect(3) = e-103
Identities = 68/78 (87%), Positives = 75/78 (96%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVW KNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 381 GNWIEILRVDNLVITGKGKLDGQGPAVWGKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 560
Query: 569 LLNSKFFHMNMYRCKDML 622
LLN+KFFHMN+++CKDML
Sbjct: 561 LLNAKFFHMNVFQCKDML 614
Score = 168 bits (362), Expect(3) = 3e-082
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 134 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 313
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 314 QGRRDHPGGRQSAGDHGPEPVQG 382
Score = 150 bits (323), Expect(3) = 1e-095
Identities = 65/79 (82%), Positives = 67/79 (84%)
Frame = -3 / -1
Query: 624 ISMSLHRYMFMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSR 445
I+MSLH FMWKNL SSV PDTSPLFT S TSELGRILQSYFL EFL HTAGPCPS
Sbjct: 616 INMSLHWNTFMWKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLPHTAGPCPSS 437
Query: 444 FPLPVMTRLSTRRISIQLP 388
FPLPV+TRLSTRRISIQLP
Sbjct: 436 FPLPVITRLSTRRISIQLP 380
Score = 146 bits (313), Expect(3) = 6e-072
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 386 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 207
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 206 LRAVLLAVAGGAQLADVERPARPGR 132
Score = 136 bits (292), Expect(3) = 3e-082
Identities = 59/78 (75%), Positives = 63/78 (80%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RV QEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 383 *LDRDPACGQPGDHRQGEARRAGPRRVGQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 562
Query: 571 AQLQVLPHEHVPVQGHAD 624
A+ QVLPHE VPVQGH D
Sbjct: 563 AKRQVLPHERVPVQGHVD 616
Score = 132 bits (283), Expect(4) = 2e-043
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 381 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 202
Query: 203 CCLS 192
CC S
Sbjct: 201 CCPS 190
Score = 124 bits (266), Expect(3) = 6e-072
Identities = 53/81 (65%), Positives = 60/81 (74%)
Frame = -2 / -3
Query: 622 QHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXXXXXXXAPHGWALPVKV 443
QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D APHG ALPV++
Sbjct: 614 QHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVEL 435
Query: 442 SLAGDDQVIHA*NLDPITMVL 380
LAGD QV+H +LDP+T+VL
Sbjct: 434 PLAGDHQVVHTQDLDPVTLVL 372
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 376 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 510
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 256 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 381
Score = 53.3 bits (110), Expect(3) = 1e-095
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 99 PSQHARRRRTPGGRRLSSHCLCTP 28
Score = 46.9 bits (96), Expect(3) = e-103
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 17 TNKNGVHRQCDESLLPPGVRLRRACWEGR 103
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 118 AMRKRRPGLAGRSTSASWAPPATARRT 198
Score = 42.3 bits (86), Expect(3) = 3e-082
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 24 KMACTGNAMRAFFLLAFVCAAHAGKD 101
Score = 41.8 bits (85), Expect(3) = 6e-072
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 98 LPSMRGADERQEEEGSHRIACARH 27
Score = 39.1 bits (79), Expect(4) = 2e-043
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 510 WAGSCSRTSWRTSSCPTRRGPARRASPCR*SPGCPHAGSRSSY 382
Score = 35.9 bits (72), Expect(4) = 2e-043
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 103 ASFPACAAQTNARRKKALIALPVHAI 26
Score = 27.2 bits (53), Expect(4) = 2e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 608 TGTCSCGRTW 579
TGT SCGRTW
Sbjct: 600 TGTRSCGRTW 571
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 25 KWRAQAMR*EP 57
>gb|CF486033.1|CF486033 POL1_35_F09.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F09_A002 3', mRNA sequence
Length = 618
Score = 373 bits (808), Expect = e-102
Identities = 150/173 (86%), Positives = 163/173 (94%)
Frame = +2 / +1
Query: 752 PGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAAS 931
PGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAAS
Sbjct: 1 PGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAAS 180
Query: 932 VLTVSKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEA 1111
VLT SKIHYENIKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEA
Sbjct: 181 VLTASKIHYENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEA 360
Query: 1112 VSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF*T 1270
VSLLC+ K+PCTGVTMD+V VEYSG NNKTMA+C NAKGS GCLKELACF*T
Sbjct: 361 VSLLCSDKIPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*T 519
Score = 312 bits (675), Expect = 1e-083
Identities = 141/172 (81%), Positives = 148/172 (86%)
Frame = -3 / -2
Query: 1269 V*KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEV 1090
V*KHASSLRQP+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EV
Sbjct: 518 V*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEV 339
Query: 1089 PVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYA 910
PV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYA
Sbjct: 338 PVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYA 159
Query: 909 LMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVP 754
L+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VP
Sbjct: 158 LIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVP 3
Score = 91.8 bits (194), Expect(3) = 9e-036
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 132 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 272
Score = 84.0 bits (177), Expect(3) = 4e-023
Identities = 36/53 (67%), Positives = 42/53 (79%)
Frame = -2 / -1
Query: 1270 GLEACKLLEATLGAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GL+AC+LLEA GAALGV AY HGLVV A + D+DVIHGDA A DL A+QA+
Sbjct: 519 GLKACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAKQAD 361
Score = 75.3 bits (158), Expect(3) = 9e-036
Identities = 31/45 (68%), Positives = 35/45 (77%)
Frame = +3 / +2
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAPRVASRSLHASRP 1271
S A ASPW+TS S+ A TTRPW YA+TPRAAP+ ASRS HA RP
Sbjct: 386 SPALASPWITSRSNTVAKTTRPWPYAKTPRAAPQAASRSSHAFRP 520
Score = 37.3 bits (75), Expect(3) = 4e-023
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -1
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 186 EHGGGVLVRLDPEAVARLLQRTV 118
Score = 26.7 bits (52), Expect(3) = 4e-023
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 271 C*GSTSCR**WG 236
Score = 24.0 bits (46), Expect(3) = 9e-036
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 6 DNQGEHHRRHM 38
>gb|CL187602.1|CL187602 104_403_10901000_116_32464_026 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10901000, DNA
sequence
Length = 712
Score = 266 bits (576), Expect(2) = 1e-099
Identities = 103/164 (62%), Positives = 129/164 (78%)
Frame = +2 / -3
Query: 539 VNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTV 718
V NG VSG+ LLNSKFFH+N+ K++ +KDV +TAPGD NTDG+H+G S+ ++ITN+
Sbjct: 710 VTNGTVSGIKLLNSKFFHINIDASKNITVKDVNITAPGDVENTDGVHVGMSTKVSITNST 531
Query: 719 IGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFG 898
IG GDDCIS+GPG+ V + + CGPG GISIG LGRYKDEKDVTD+ V+DC LKKT G
Sbjct: 530 IGTGDDCISVGPGSDGVMVNNIICGPGQGISIGCLGRYKDEKDVTDVTVRDCVLKKTTNG 351
Query: 899 VRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKLC 1030
VRIK+YEDA SVLT S + +ENI+ME+ ANPI ID +CP K+C
Sbjct: 350 VRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPEKVC 219
Score = 203 bits (437), Expect(2) = 4e-071
Identities = 94/164 (57%), Positives = 108/164 (65%)
Frame = -3 / +1
Query: 1029 HNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSV 850
H GQ + SM MG A SSIL+FS + VST++ASSY LMRTP +VFL QS T+ SV
Sbjct: 220 HTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSV 399
Query: 849 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMP 670
TSFSSL RPR PMLMP PGPQ+ T +PGP EMQSSP PM LVM+ + P W P
Sbjct: 400 TSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTP 579
Query: 669 SVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSVTPDTSPLFT 538
SV SPGAV TS M + MWKNLELSS+ P+T PL T
Sbjct: 580 SVFSTSPGAVMFTSFTVMFFEASILMWKNLELSSLIPETVPLVT 711
Score = 119 bits (255), Expect(2) = 1e-099
Identities = 46/66 (69%), Positives = 58/66 (87%)
Frame = +2 / -3
Query: 1043 ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNA 1222
+S V VKDVTF+NITGTSSTP+A+SLLC+ PC+GV++ DVNVEY+G NNKTMA+C+NA
Sbjct: 200 SSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 21
Query: 1223 KGSTKG 1240
KG+ KG
Sbjct: 20 KGTAKG 3
Score = 88.1 bits (186), Expect(2) = 4e-071
Identities = 40/68 (58%), Positives = 47/68 (69%)
Frame = -3 / +1
Query: 1239 PLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVMFLKVTSL 1060
PL +PLA +H AMVLL +P YST TS TP+HG QSRL A GV++VPVM VTSL
Sbjct: 4 PLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPVMLRNVTSL 183
Query: 1059 TVTLEAPL 1036
T+T E L
Sbjct: 184 TMT*EESL 207
>gb|CW160106.1|CW160106 104_566_11149707_148_36427_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149707, DNA
sequence
Length = 526
Score = 337 bits (730), Expect(2) = 2e-098
Identities = 136/150 (90%), Positives = 146/150 (97%)
Frame = +2 / -3
Query: 506 KILPNSLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMG 685
KILPNSLV+D+VNNGEVSG+TLLN+KFFHMN+++CKDMLIKDVTVTAPGDSPNTDGIHMG
Sbjct: 524 KILPNSLVLDYVNNGEVSGITLLNAKFFHMNVFQCKDMLIKDVTVTAPGDSPNTDGIHMG 345
Query: 686 DSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV 865
DSSG+TI NTVIGVGDDCISIGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV
Sbjct: 344 DSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINV 165
Query: 866 KDCTLKKTMFGVRIKAYEDAASVLTVSKIH 955
KDCTLKKT G+RIKAYEDAASVLT SKIH
Sbjct: 164 KDCTLKKTSNGLRIKAYEDAASVLTASKIH 75
Score = 297 bits (644), Expect(2) = 2e-084
Identities = 129/151 (85%), Positives = 132/151 (87%)
Frame = -3 / +1
Query: 957 *WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTP 778
*WILE VSTEAASSYAL+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTP
Sbjct: 73 *WILEAVSTEAASSYALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTP 252
Query: 777 VMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYM 598
VMFTL VPGPMEMQSSPTPMTV MV PDESPMWMPSVLGLSPGAVTVTSLI+MSLH
Sbjct: 253 VMFTLVVPGPMEMQSSPTPMTVFSMVTPDESPMWMPSVLGLSPGAVTVTSLINMSLHWNT 432
Query: 597 FMWKNLELSSVTPDTSPLFTKSITSELGRIL 505
FMWKNL SSV PDTSPLFT S TSELGRIL
Sbjct: 433 FMWKNLAFSSVIPDTSPLFT*SSTSELGRIL 525
Score = 119 bits (254), Expect(3) = 2e-038
Identities = 48/60 (80%), Positives = 50/60 (83%)
Frame = +1 / -2
Query: 505 QDPSQLAGDGLREQRGGVRGHAAQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPHG 684
QDP+QLAG GLREQRGGVR HAA+ QVLPHE VPVQGH D G D GARGQPQHG HPHG
Sbjct: 525 QDPAQLAGAGLREQRGGVRDHAAKRQVLPHERVPVQGHVD*GCDGHGARGQPQHGRHPHG 346
Score = 106 bits (227), Expect(4) = 2e-033
Identities = 43/54 (79%), Positives = 47/54 (87%)
Frame = -2 / +3
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRVGKD 509
+RVGAVPGRR H+L+QHVLA HVHVEELGV QRDPGHLPVVH V HQRVG+D
Sbjct: 360 VRVGAVPGRRDRHILNQHVLALEHVHVEELGV*QRDPGHLPVVHVVQHQRVGQD 521
Score = 56.5 bits (117), Expect(3) = 2e-038
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +1 / -2
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQV 1026
ED+ R P QGVRGRRLRAHRLQDPL + S P + + P ++
Sbjct: 147 EDEQRPPDQGVRGRRLRAHRLQDPLENIKREDWSNPIIMDRKYCPNKI 4
Score = 45.1 bits (92), Expect(2) = 2e-098
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2 / -2
Query: 959 ENIKMEDSANPIFIDMKYCPNKL 1027
ENIK ED +NPI +D KYCPNK+
Sbjct: 72 ENIKREDWSNPIIMDRKYCPNKI 4
Score = 38.2 bits (77), Expect(4) = 2e-033
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / +2
Query: 695 RMSRPCGCHPCWG 657
R SRPCGC PCWG
Sbjct: 335 RTSRPCGCRPCWG 373
Score = 37.7 bits (76), Expect(2) = 2e-084
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -3 / +2
Query: 1023 LLGQYFMSMKMGLAESSILIFS 958
LLGQYF+SM MG +SS+L+FS
Sbjct: 8 LLGQYFLSMIMGFDQSSLLMFS 73
Score = 37.3 bits (75), Expect(4) = 2e-033
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / +3
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 93 EHGGGVLVRLDPEAVARLLQRTV 161
Score = 24.0 bits (46), Expect(3) = 2e-038
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / -2
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 273 DNQGEHHRRHM 241
Score = 23.5 bits (45), Expect(4) = 2e-033
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1 / +3
Query: 1022 CWGSTSCR*RWG 987
C GSTSC * WG
Sbjct: 9 C*GSTSCP**WG 44
>gb|CF481344.1|CF481344 POL1_71_A04.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_A04_A002 5', mRNA sequence
Length = 592
Score = 187 bits (402), Expect(3) = 9e-098
Identities = 76/83 (91%), Positives = 79/83 (95%)
Frame = +2 / +2
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DS KAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 128 ASGPGGSFDISKLGASGDGKKDSAKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 307
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 308 CKGDVTIQVDGNLLATTDLSQYK 376
Score = 186 bits (400), Expect(3) = 3e-092
Identities = 76/94 (80%), Positives = 79/94 (84%)
Frame = -3 / -2
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 393 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 214
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAF LS LP PEAPNL+MS DPPGPDA + P
Sbjct: 213 SCTAFALSFLPSPEAPNLLMSNDPPGPDAAFASP 112
Score = 165 bits (355), Expect(3) = 9e-098
Identities = 63/72 (87%), Positives = 69/72 (95%)
Frame = +2 / +2
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+V NGEVSG+T
Sbjct: 377 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVTNGEVSGIT 556
Query: 569 LLNSKFFHMNMY 604
LLN+KFFHMN++
Sbjct: 557 LLNAKFFHMNVF 592
Score = 165 bits (354), Expect(3) = 8e-077
Identities = 65/83 (78%), Positives = 72/83 (86%)
Frame = +1 / +1
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ Q EGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 130 VRAWRVVRHQQVGRLRRRQEGQREGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 309
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 310 QGRRDHPGGRQSAGDHGPEPVQG 378
Score = 146 bits (313), Expect(3) = 3e-068
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -1
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 382 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 203
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 202 LRAVLLAVAGGAQLADVERPARPGR 128
Score = 141 bits (303), Expect(3) = 3e-092
Identities = 60/70 (85%), Positives = 61/70 (87%)
Frame = -3 / -2
Query: 597 FMWKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRL 418
FMWKNL SSV PDTSPL T S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRL
Sbjct: 585 FMWKNLAFSSVIPDTSPLVT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRL 406
Query: 417 STRRISIQLP 388
STRRISIQLP
Sbjct: 405 STRRISIQLP 376
Score = 127 bits (271), Expect(4) = 1e-040
Identities = 51/64 (79%), Positives = 53/64 (82%)
Frame = -1 / -3
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 377 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 198
Query: 203 CCLS 192
C S
Sbjct: 197 RCPS 186
Score = 122 bits (260), Expect(3) = 8e-077
Identities = 53/71 (74%), Positives = 58/71 (81%)
Frame = +1 / +1
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLR+QRGGVR HA
Sbjct: 379 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLRDQRGGVRDHA 558
Query: 571 AQLQVLPHEHV 603
A+ QVLPHE V
Sbjct: 559 AKRQVLPHERV 591
Score = 112 bits (239), Expect(3) = 3e-068
Identities = 47/74 (63%), Positives = 54/74 (72%)
Frame = -2 / -1
Query: 601 HVHVEELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXXXXXXXAPHGWALPVKVSLAGDDQ 422
HVHVEELGV QRDPGHLPV H V HQRVG+D APHG ALPV++ LAGD Q
Sbjct: 589 HVHVEELGV*QRDPGHLPVGHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQ 410
Query: 421 VIHA*NLDPITMVL 380
V+H +LDP+T+VL
Sbjct: 409 VVHTQDLDPVTLVL 368
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +3
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 372 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 506
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +3
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 252 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 377
Score = 53.3 bits (110), Expect(3) = 3e-092
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -3
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 95 PSQHARRRRTPGGRRLSSHCLCTP 24
Score = 46.9 bits (96), Expect(3) = 9e-098
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 13 TNKNGVHRQCDESLLPPGVRLRRACWEGR 99
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +3
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 114 AMRKRRPGLAGRSTSASWAPPATARRT 194
Score = 42.3 bits (86), Expect(3) = 8e-077
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 20 KMACTGNAMRAFFLLAFVCAAHAGKD 97
Score = 41.8 bits (85), Expect(3) = 3e-068
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -1
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 94 LPSMRGADERQEEEGSHRIACARH 23
Score = 40.0 bits (81), Expect(4) = 1e-040
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -3
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 506 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 378
Score = 35.9 bits (72), Expect(4) = 1e-040
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -2
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 99 ASFPACAAQTNARRKKALIALPVHAI 22
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 21 KWRAQAMR*EP 53
Score = 22.1 bits (42), Expect(4) = 1e-040
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1 / -3
Query: 602 TCSCGRTW 579
T SCGRTW
Sbjct: 590 TRSCGRTW 567
>gb|BG411749.1|BG411749 OV2_37_E12.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 670
Score = 355 bits (770), Expect(2) = 3e-097
Identities = 143/165 (86%), Positives = 155/165 (93%)
Frame = +2 / +2
Query: 776 TGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIH 955
TGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAASVLT SKIH
Sbjct: 2 TGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIH 181
Query: 956 YENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAK 1135
YENIKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAVSLLC+ K
Sbjct: 182 YENIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDK 361
Query: 1136 VPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF*T 1270
+PCTGVTMD+V VEYSG NNKTMA+C NAKGS GCLKELACF*T
Sbjct: 362 IPCTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*T 496
Score = 298 bits (646), Expect = 1e-079
Identities = 135/165 (81%), Positives = 142/165 (86%)
Frame = -3 / -2
Query: 1269 V*KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEV 1090
V*KHASSLRQP+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EV
Sbjct: 495 V*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEV 316
Query: 1089 PVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYA 910
PV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYA
Sbjct: 315 PVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYA 136
Query: 909 LMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPV 775
L+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPV
Sbjct: 135 LIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPV 1
Score = 91.8 bits (194), Expect(2) = 8e-035
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +1
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 109 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 249
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -2 / -1
Query: 1270 GLEACKLLEATLGAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GLEAC+LLEA GAALGV AY HGLVV A + D+DVIHGDA A DL AEQA+
Sbjct: 496 GLEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQAD 338
Score = 78.0 bits (164), Expect(2) = 8e-035
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3 / +3
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAPRVASRSLHASRP 1271
S A ASPW+TS S+ A TTRPW YA+TPRAAP+ ASRS HASRP
Sbjct: 363 SPALASPWITSRSNTVAKTTRPWPYAKTPRAAPQAASRSSHASRP 497
Score = 37.3 bits (75), Expect(3) = 4e-024
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -1
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 163 EHGGGVLVRLDPEAVARLLQRTV 95
Score = 26.7 bits (52), Expect(3) = 4e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 248 C*GSTSCR**WG 213
Score = 23.1 bits (44), Expect(2) = 3e-097
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3 / +3
Query: 1293 LVIIFLSSLHCPLVAIHW*RTTVKRQTSDSY 1385
L + + SL + AIHW*RT+ SY
Sbjct: 510 LALYLVISLVHXIGAIHW*RTSTIHWFISSY 602
>gb|BG355410.1|BG355410 EM1_16_B04.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence
Length = 522
Score = 354 bits (768), Expect = 2e-096
Identities = 142/171 (83%), Positives = 156/171 (91%)
Frame = +2 / +1
Query: 626 KDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHG 805
KDVTVTAPGDSPNTDGIH+GDSS +TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHG
Sbjct: 10 KDVTVTAPGDSPNTDGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHG 189
Query: 806 ISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSA 985
IS+GSLGRYKDEKDVTDINVKDCTLKKT GVRIK+YEDAA V+T SK+HYENI M+D A
Sbjct: 190 ISVGSLGRYKDEKDVTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVA 369
Query: 986 NPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKV 1138
NPI IDMKYCPNK+CTA G SKVTVKDVTFKNITGTSSTP AVSLLC+ K+
Sbjct: 370 NPIIIDMKYCPNKICTAKGDSKVTVKDVTFKNITGTSSTPGAVSLLCSDKI 522
Score = 296 bits (641), Expect = 6e-079
Identities = 134/170 (78%), Positives = 143/170 (84%)
Frame = -3 / -2
Query: 1134 LAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS* 955
L+ QSRLTA GV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSM MGLA SS+ +FS*
Sbjct: 518 LSEQSRLTAPGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMAMFS* 339
Query: 954 WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPV 775
W LE V T AASS L+RTP +VFL VQSLTLMSVTSFSSLY PRLP LMPWPGPQVTPV
Sbjct: 338 WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPV 159
Query: 774 MFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSL 625
+PGPMEMQSSPTPM V VMV +ESPMWMPSVLGLSPGAVTVTSL
Sbjct: 158 TLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSL 9
>gb|CF484527.1|CF484527 POL1_25_H01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_25_H01_A002 5', mRNA sequence
Length = 586
Score = 189 bits (407), Expect(3) = 4e-096
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +2 / +3
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 135 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 314
Query: 314 CKGDVTIQVDGNLLATTDLSQYK 382
CKGDVTIQVDGNLLATTDLSQYK
Sbjct: 315 CKGDVTIQVDGNLLATTDLSQYK 383
Score = 188 bits (404), Expect(3) = 3e-092
Identities = 77/94 (81%), Positives = 80/94 (85%)
Frame = -3 / -1
Query: 399 IQLPWSLYWLRSVVASRLPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHA 220
I + LYWLRSVVASRLPSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HA
Sbjct: 400 ISIQLPLYWLRSVVASRLPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHA 221
Query: 219 SCTAFVLSVLPLPEAPNLVMSKDPPGPDAFASMP 118
SCTAFVLS LP PEAPNL+MS DPPGPDA + P
Sbjct: 220 SCTAFVLSFLPSPEAPNLLMSNDPPGPDAAFASP 119
Score = 168 bits (362), Expect(3) = 5e-076
Identities = 66/83 (79%), Positives = 73/83 (87%)
Frame = +1 / +2
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 137 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 316
Query: 316 QGRRDHPGGWQSAGDHGPKPVQG 384
QGRRDHPGG QSAGDHGP+PVQG
Sbjct: 317 QGRRDHPGGRQSAGDHGPEPVQG 385
Score = 157 bits (338), Expect(3) = 4e-096
Identities = 61/67 (91%), Positives = 65/67 (97%)
Frame = +2 / +3
Query: 389 GNWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPNSLVMDFVNNGEVSGVT 568
GNWIEILRVDNLVITGKG LDGQGPAVWSKNSC KKYDCKILPNSLV+D+VNNGEVSG+T
Sbjct: 384 GNWIEILRVDNLVITGKGKLDGQGPAVWSKNSCAKKYDCKILPNSLVLDYVNNGEVSGIT 563
Query: 569 LLNSKFF 589
LLN+KFF
Sbjct: 564 LLNAKFF 584
Score = 146 bits (313), Expect(3) = 6e-066
Identities = 67/85 (78%), Positives = 71/85 (83%)
Frame = -2 / -3
Query: 388 MVLVLA*VRGRQQIAIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHS 209
+ LVLA VRGRQQIA+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHS
Sbjct: 389 VTLVLAQVRGRQQIAVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHS 210
Query: 208 LRAVCLAIAGGAQLGDVEGPTRPGR 134
LRAV LA+AGGAQL DVE P RPGR
Sbjct: 209 LRAVLLAVAGGAQLADVERPARPGR 135
Score = 139 bits (299), Expect(3) = 3e-092
Identities = 59/68 (86%), Positives = 60/68 (88%)
Frame = -3 / -1
Query: 591 WKNLELSSVTPDTSPLFTKSITSELGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLST 412
WKNL SSV PDTSPLFT S TSELGRILQSYFL EFLLHTAGPCPS FPLPV+TRLST
Sbjct: 586 WKNLAFSSVIPDTSPLFT*SSTSELGRILQSYFLAHEFLLHTAGPCPSSFPLPVITRLST 407
Query: 411 RRISIQLP 388
RRISIQLP
Sbjct: 406 RRISIQLP 383
Score = 132 bits (283), Expect(3) = 7e-041
Identities = 52/64 (81%), Positives = 54/64 (84%)
Frame = -1 / -2
Query: 383 PCTGLGPWSPADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPS 204
PCTG GPWSPADC PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPS
Sbjct: 384 PCTGSGPWSPADCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPS 205
Query: 203 CCLS 192
CC S
Sbjct: 204 CCPS 193
Score = 115 bits (246), Expect(3) = 5e-076
Identities = 51/67 (76%), Positives = 55/67 (82%)
Frame = +1 / +2
Query: 391 *LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQLAGDGLREQRGGVRGHA 570
*LDRD G PG HRQG+ RAGP RVEQEL+ QEVRLQDP+QLAG GLREQRGGVR HA
Sbjct: 386 *LDRDPACGQPGDHRQGEARRAGPRRVEQELVRQEVRLQDPAQLAGAGLREQRGGVRDHA 565
Query: 571 AQLQVLP 591
A+ QVLP
Sbjct: 566 AKRQVLP 586
Score = 104 bits (222), Expect(3) = 6e-066
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = -2 / -3
Query: 589 EELGVEQRDPGHLPVVHEVHHQRVGKDXXXXXXXXXXXAPHGWALPVKVSLAGDDQVIHA 410
EELGV QRDPGHLPVVH V HQRVG+D APHG ALPV++ LAGD QV+H
Sbjct: 584 EELGV*QRDPGHLPVVHVVQHQRVGQDLAVVLLGARVLAPHGGALPVELPLAGDHQVVHT 405
Query: 409 *NLDPITMVL 380
+LDP+T+VL
Sbjct: 404 QDLDPVTLVL 375
Score = 75.3 bits (158), Expect(4) = 1e-039
Identities = 32/45 (71%), Positives = 33/45 (73%)
Frame = +3 / +1
Query: 384 TMVIGSRFYAWITWSSPARETLTGRAQPCGARTPAPRSTTARSFP 518
T V GSR W TW SPAR + TGRA PCGART APRSTTARS P
Sbjct: 379 TRVTGSRSCVWTTW*SPARGSSTGRAPPCGARTRAPRSTTARSCP 513
Score = 74.4 bits (156), Expect(4) = 1e-039
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +3 / +1
Query: 258 QSSYPRATSLSDNSTSQALARAT*PSRWMAICWRPRT*ASTR 383
+SS RAT+ SD+STS A ARAT*PSRW AICWRPRT*ASTR
Sbjct: 259 RSSSLRATTSSDHSTSPARARAT*PSRWTAICWRPRT*ASTR 384
Score = 53.3 bits (110), Expect(3) = 3e-092
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -2
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 102 PSQHARRRRTPGGRRLSSHCLCTP 31
Score = 46.9 bits (96), Expect(3) = 4e-096
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 20 TNKNGVHRQCDESLLPPGVRLRRACWEGR 106
Score = 46.4 bits (95), Expect(4) = 1e-039
Identities = 18/27 (66%), Positives = 21/27 (77%)
Frame = +3 / +1
Query: 120 ASMRKRPGLVGPSTSPSWAPPAMARQT 200
A ++RPGL G STS SWAPPA AR+T
Sbjct: 121 AMRKRRPGLAGRSTSASWAPPATARRT 201
Score = 42.3 bits (86), Expect(3) = 5e-076
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 27 KMACTGNAMRAFFLLAFVCAAHAGKD 104
Score = 41.8 bits (85), Expect(3) = 6e-066
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -3
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 101 LPSMRGADERQEEEGSHRIACARH 30
Score = 40.0 bits (81), Expect(3) = 7e-041
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -1 / -2
Query: 518 WEGXXXXXXXXXXXXXXRLGPARQGFPCR**PGYPRVESRSNY 390
W G R GPAR+ PCR* PG P SRS+Y
Sbjct: 513 WAGSCSRTSWRTSSCSTRRGPARRASPCR*SPGCPHAGSRSSY 385
Score = 35.9 bits (72), Expect(3) = 7e-041
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -1
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 106 ASFPACAAQTNARRKKALIALPVHAI 29
Score = 25.8 bits (50), Expect(4) = 1e-039
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +1
Query: 33 RWRAQTMR*EP 65
+WRAQ MR*EP
Sbjct: 28 KWRAQAMR*EP 60
>gb|CF485728.1|CF485728 POL1_33_F06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_33_F06_A002 3', mRNA sequence
Length = 609
Score = 350 bits (759), Expect = 3e-095
Identities = 141/163 (86%), Positives = 153/163 (93%)
Frame = +2 / +3
Query: 782 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYE 961
VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAASVLT SKIHYE
Sbjct: 3 VTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYE 182
Query: 962 NIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVP 1141
NIKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAVSLLC+ K+P
Sbjct: 183 NIKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIP 362
Query: 1142 CTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF*T 1270
CTGVTMD+V VEYSG NNKTMA+C NAKGS GCLKELACF*T
Sbjct: 363 CTGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*T 491
Score = 293 bits (635), Expect = 4e-078
Identities = 133/163 (81%), Positives = 140/163 (85%)
Frame = -3 / -3
Query: 1269 V*KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEV 1090
V*KHASSLRQP+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EV
Sbjct: 490 V*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEV 311
Query: 1089 PVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYA 910
PV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYA
Sbjct: 310 PVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYA 131
Query: 909 LMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVT 781
L+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VT
Sbjct: 130 LIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVT 2
Score = 91.8 bits (194), Expect(2) = 8e-035
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +2
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 104 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 244
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -2 / -2
Query: 1270 GLEACKLLEATLGAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GLEAC+LLEA GAALGV AY HGLVV A + D+DVIHGDA A DL AEQA+
Sbjct: 491 GLEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQAD 333
Score = 78.0 bits (164), Expect(2) = 8e-035
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3 / +1
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAPRVASRSLHASRP 1271
S A ASPW+TS S+ A TTRPW YA+TPRAAP+ ASRS HASRP
Sbjct: 358 SPALASPWITSRSNTVAKTTRPWPYAKTPRAAPQAASRSSHASRP 492
Score = 37.3 bits (75), Expect(3) = 4e-024
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 158 EHGGGVLVRLDPEAVARLLQRTV 90
Score = 26.7 bits (52), Expect(3) = 4e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 243 C*GSTSCR**WG 208
>gb|CW330184.1|CW330184 104_827_11480239_148_36008_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480239, DNA
sequence
Length = 729
Score = 349 bits (756), Expect = 8e-095
Identities = 138/229 (60%), Positives = 175/229 (76%)
Frame = +2 / +2
Query: 584 FFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTS 763
FFH+N++ K++LI VTV APG+SPNTDGIHMGDS +TI+ T IGVGDDCISIGPG+
Sbjct: 2 FFHLNIFASKNVLIDKVTVKAPGNSPNTDGIHMGDSENVTISGTTIGVGDDCISIGPGSK 181
Query: 764 KVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTV 943
+ I GV CGPGHGIS+GSLGRYKDEKDV D+ VK CTL T G+RIK+YED+ S V
Sbjct: 182 TIRIDGVKCGPGHGISVGSLGRYKDEKDVEDVKVKGCTLVGTTNGLRIKSYEDSKSSPKV 361
Query: 944 SKIHYENIKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLL 1123
+K YE++ M++ + PI ID KYCPN +C +GASKV V DV FKNI GTS+TPEA++L
Sbjct: 362 TKFVYEDVTMDNVSYPIIIDQKYCPNNICVRSGASKVAVTDVVFKNIHGTSNTPEAITLN 541
Query: 1124 CTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF*T 1270
C +PC GV + +V+++Y+ +NNKTMA+C NA G + G KELAC *+
Sbjct: 542 CADNLPCQGVQLHNVDIKYNKSNNKTMAVCKNAVGKSFGLSKELACI*S 688
Score = 257 bits (556), Expect = 3e-067
Identities = 125/226 (55%), Positives = 144/226 (63%)
Frame = -3 / -1
Query: 1260 HASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPVM 1081
HASS +P LP AF+ AMVLLL LY T TP HG L+ Q + ASGV EVP M
Sbjct: 678 HASSFDKPKDLPTAFLQTAMVLLLDLLYLMSTLWSCTPWHGRLSAQLSVMASGVLEVPWM 499
Query: 1080 FLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMR 901
FLK TS+T TL+AP L GQYF SM +G S++ S L T+ + SSY LMR
Sbjct: 498 FLKTTSVTATLDAPDLTQMLFGQYFWSMMIGYETLSMVTSSYTNLVTLGDDLESSYDLMR 319
Query: 900 TPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTP 721
P +V VQ T S TSFSSLY PRLP LMPWPGP +TP + + +PGPMEMQSSPTP
Sbjct: 318 RPLVVPTSVQPFTFTSSTSFSSLYLPRLPTLMPWPGPHLTPSIRIVLLPGPMEMQSSPTP 139
Query: 720 MTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKN 583
M V +MV ESPMW+PSVLGL PGA TVT I+ L M WKN
Sbjct: 138 MVVPLMVTFSESPMWIPSVLGLFPGAFTVTLSINTFLLAKMLRWKN 1
>gb|CF489342.1|CF489342 POL1_57_B05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_B05_A002 3', mRNA sequence
Length = 670
Score = 348 bits (755), Expect = 1e-094
Identities = 140/162 (86%), Positives = 152/162 (93%)
Frame = +2 / +3
Query: 785 TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYEN 964
TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAASVLT SKIHYEN
Sbjct: 3 TCGPGHGISIGSLGRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYEN 182
Query: 965 IKMEDSANPIFIDMKYCPNKLCTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPC 1144
IKMEDS+NPI IDMKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++PEAVSLLC+ K+PC
Sbjct: 183 IKMEDSSNPIIIDMKYCPNKICTASGASKVTVKDVSFKNVTGTSASPEAVSLLCSDKIPC 362
Query: 1145 TGVTMDDVNVEYSGTNNKTMAICTNAKGSTKGCLKELACF*T 1270
TGVTMD+V VEYSG NNKTMA+C NAKGS GCLKELACF*T
Sbjct: 363 TGVTMDNVKVEYSGKNNKTMAVCQNAKGSATGCLKELACF*T 488
Score = 291 bits (630), Expect = 2e-077
Identities = 132/162 (81%), Positives = 139/162 (85%)
Frame = -3 / -1
Query: 1269 V*KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEV 1090
V*KHASSLRQP+ LPLAF H AMVLL +PLYSTLT SMVTPV G L+ QSRLTASG+ EV
Sbjct: 487 V*KHASSLRQPVALPLAFWHTAMVLLFLPLYSTLTLSMVTPVQGILSEQSRLTASGLAEV 308
Query: 1089 PVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYA 910
PV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASSYA
Sbjct: 307 PVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASSYA 128
Query: 909 LMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQV 784
L+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP V
Sbjct: 127 LIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHV 2
Score = 91.8 bits (194), Expect(2) = 8e-035
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +2
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 101 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 241
Score = 87.7 bits (185), Expect(3) = 4e-024
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = -2 / -3
Query: 1270 GLEACKLLEATLGAALGVRAYSHGLVVGAAILDVDVIHGDAGAWDLGSAEQAN 1112
GLEAC+LLEA GAALGV AY HGLVV A + D+DVIHGDA A DL AEQA+
Sbjct: 488 GLEACELLEAACGAALGVLAYGHGLVVFATVFDLDVIHGDASAGDLVGAEQAD 330
Score = 78.0 bits (164), Expect(2) = 8e-035
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +3 / +1
Query: 1137 SHAPASPWMTSTSSIAAPTTRPWLYARTPRAAPRVASRSLHASRP 1271
S A ASPW+TS S+ A TTRPW YA+TPRAAP+ ASRS HASRP
Sbjct: 355 SPALASPWITSRSNTVAKTTRPWPYAKTPRAAPQAASRSSHASRP 489
Score = 37.3 bits (75), Expect(3) = 4e-024
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = -2 / -3
Query: 937 EHGGGVLVRLDADAEHRLLKSAI 869
EHGGGVLVRLD +A RLL+ +
Sbjct: 155 EHGGGVLVRLDPEAVARLLQRTV 87
Score = 26.7 bits (52), Expect(3) = 4e-024
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = -1 / -2
Query: 1022 CWGSTSCR*RWG 987
C GSTSCR* WG
Sbjct: 240 C*GSTSCR**WG 205
>gb|CW323366.1|CW323366 104_817_11476592_148_35963_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476592, DNA
sequence
Length = 680
Score = 278 bits (602), Expect(2) = 3e-093
Identities = 109/135 (80%), Positives = 124/135 (91%)
Frame = +2 / -3
Query: 521 SLVMDFVNNGEVSGVTLLNSKFFHMNMYRCKDMLIKDVTVTAPGDSPNTDGIHMGDSSGI 700
+LV+DF NN VSG+TLLNSKFFHMN+++CK + IKDVTVTAPGDSPNTDGIH+GDSS +
Sbjct: 405 TLVLDFCNNATVSGITLLNSKFFHMNVFQCKGVTIKDVTVTAPGDSPNTDGIHIGDSSKV 226
Query: 701 TITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKDVTDINVKDCTL 880
TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKDVTDINVKDCTL
Sbjct: 225 TITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKDVTDINVKDCTL 46
Query: 881 KKTMFGVRIKAYEDA 925
KKT GVRIK+YEDA
Sbjct: 45 KKTSNGVRIKSYEDA 1
Score = 221 bits (477), Expect(2) = 3e-069
Identities = 99/134 (73%), Positives = 105/134 (78%)
Frame = -3 / +2
Query: 924 ASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPM 745
ASS L+RTP +VFL VQSLTLMSVTSFSSLY PRLP LMPWPGPQVTPV +PGPM
Sbjct: 2 ASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQVTPVTLIPVLPGPM 181
Query: 744 EMQSSPTPMTVLVMVIPDESPMWMPSVLGLSPGAVTVTSLISMSLHRYMFMWKNLELSSV 565
EMQSSPTPM V VMV +ESPMWMPSVLGLSPGAVTVTSLI LH FMWKNLE S V
Sbjct: 182 EMQSSPTPMVVPVMVTLEESPMWMPSVLGLSPGAVTVTSLIVTPLHWNTFMWKNLEFSRV 361
Query: 564 TPDTSPLFTKSITS 523
P+T L KS T+
Sbjct: 362 IPETVALLQKSSTN 403
Score = 86.3 bits (182), Expect(2) = 3e-093
Identities = 32/43 (74%), Positives = 34/43 (79%)
Frame = +2 / -3
Query: 392 NWIEILRVDNLVITGKGNLDGQGPAVWSKNSCTKKYDCKILPN 520
NWIEI VDNLVI+GKG LDGQG VW N C +KYDCKILPN
Sbjct: 651 NWIEIEHVDNLVISGKGTLDGQGKQVWDNNKCAQKYDCKILPN 523
Score = 81.3 bits (171), Expect(3) = 5e-022
Identities = 34/52 (65%), Positives = 37/52 (71%)
Frame = +1 / -2
Query: 526 GDGLREQRGGVRGHAAQLQVLPHEHVPVQGHADQGRDRDGARGQPQHGWHPH 681
G L +QR +R H A+LQVLPHE VPVQ DQGRDR ARGQPQH HPH
Sbjct: 400 GARLLQQRHRLRDHPAELQVLPHERVPVQRRDDQGRDRHRARGQPQHRRHPH 245
Score = 80.3 bits (169), Expect(4) = 8e-023
Identities = 34/51 (66%), Positives = 38/51 (74%)
Frame = -2 / +1
Query: 670 IRVGAVPGRRHGHVLDQHVLAPVHVHVEELGVEQRDPGHLPVVHEVHHQRV 518
+ VGAVPGR GHVLD+H A HVHVEELGV+Q DPG VV EV HQR+
Sbjct: 256 VGVGAVPGRGDGHVLDRHAFALEHVHVEELGVQQGDPGDGGVVAEVEHQRL 408
Score = 63.8 bits (133), Expect(2) = 3e-069
Identities = 30/43 (69%), Positives = 31/43 (72%)
Frame = -3 / +2
Query: 519 LGRILQSYFLVQEFLLHTAGPCPSRFPLPVMTRLSTRRISIQL 391
LGRILQSYF L HT P PSR PLP+MTRLST ISIQL
Sbjct: 524 LGRILQSYF*AHLLLSHTCLPWPSRVPLPLMTRLSTCSISIQL 652
Score = 46.0 bits (94), Expect(3) = 5e-022
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +1 / -2
Query: 394 LDRDSTRG*PGHHRQGKP*RAGPSRVEQELLHQEVRLQDPSQ 519
LDRD R P H RQ P R G + + Q+ + E+RLQDP+Q
Sbjct: 649 LDRDRARRQPCHQRQRHPRRPGQTSMGQQQMCSEIRLQDPAQ 524
Score = 34.1 bits (68), Expect(4) = 8e-023
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -2 / +1
Query: 520 VGKDXXXXXXXXXXXAPHGWALPVKVSLAGDDQVIHA*NLDPITMV 383
VG+D P+ +AL V+ + A DD+V+ +LDP+ +V
Sbjct: 523 VGQDLAVVFLSTFVVVPYLFALAVEGAFAADDKVVDVLDLDPVGLV 660
Score = 26.3 bits (51), Expect(4) = 8e-023
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = -1 / +3
Query: 689 SRPCGCHPCWG 657
S CGC CWG
Sbjct: 237 SHQCGCRRCWG 269
Score = 23.5 bits (45), Expect(4) = 8e-023
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +2
Query: 798 PGPQVTPVMFTLE 760
P P V PVM TLE
Sbjct: 197 PTPMVVPVMVTLE 235
Score = 22.6 bits (43), Expect(3) = 5e-022
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2 / -3
Query: 758 TSKVNITGVTCGPG 799
+SKV ITG T G G
Sbjct: 237 SSKVTITGTTIGVG 196
>gb|BG412065.1|BG412065 OV2_37_E12.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 459
Score = 339 bits (735), Expect = 6e-092
Identities = 137/153 (89%), Positives = 147/153 (96%)
Frame = +2 / +1
Query: 644 APGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSL 823
A GDSPNTDGIHMGDSSG+TI NTVIGVGDDCISIGPGT+KVNITGVTCGPGHGISIGSL
Sbjct: 1 ARGDSPNTDGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSL 180
Query: 824 GRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFID 1003
GRYKDEKDVTDINVKDCTLKKT G+RIKAYEDAASVLT SKIHYENIKMEDS+NPI ID
Sbjct: 181 GRYKDEKDVTDINVKDCTLKKTSNGLRIKAYEDAASVLTASKIHYENIKMEDSSNPIIID 360
Query: 1004 MKYCPNKLCTANGASKVTVKDVTFKNITGTSST 1102
MKYCPNK+CTA+GASKVTVKDV+FKN+TGTS++
Sbjct: 361 MKYCPNKICTASGASKVTVKDVSFKNVTGTSAS 459
Score = 293 bits (634), Expect = 5e-078
Identities = 128/149 (85%), Positives = 131/149 (87%)
Frame = -3 / -2
Query: 1095 EVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASS 916
EVPV FLK TSLTVTLEAPLAV LLGQYFMSM MG ESSIL+FS*WILE VSTEAASS
Sbjct: 452 EVPVTFLKETSLTVTLEAPLAVQILLGQYFMSMIMGFDESSILMFS*WILEAVSTEAASS 273
Query: 915 YALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQ 736
YAL+R P +VF VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQ
Sbjct: 272 YALIRRPLLVFFSVQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQ 93
Query: 735 SSPTPMTVLVMVIPDESPMWMPSVLGLSP 649
SSPTPMTV MV PDESPMWMPSVLGLSP
Sbjct: 92 SSPTPMTVFSMVTPDESPMWMPSVLGLSP 6
Score = 91.8 bits (194), Expect(3) = 1e-023
Identities = 37/47 (78%), Positives = 40/47 (85%)
Frame = +1 / +3
Query: 883 EDDVRRPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRHEVLPQQ 1023
ED+ R P QGVRGRRLRAHRLQDPL E+QDGGL +PH HRHEVLP Q
Sbjct: 240 EDEQRPPDQGVRGRRLRAHRLQDPL*EHQDGGLVEPHYHRHEVLP*Q 380
Score = 34.1 bits (68), Expect(3) = 1e-023
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +3
Query: 649 RGQPQHGWHPHG 684
RGQPQHG HPHG
Sbjct: 6 RGQPQHGRHPHG 41
Score = 24.0 bits (46), Expect(3) = 1e-023
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +1 / +3
Query: 757 DLQGEHHRRDL 789
D QGEHHRR +
Sbjct: 114 DNQGEHHRRHM 146
>gb|CF481389.1|CF481389 POL1_71_E06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_71_E06_A002 5', mRNA sequence
Length = 556
Score = 171 bits (369), Expect(3) = 8e-091
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +2 / +1
Query: 668 DGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKD 847
DGIHMGDSSG+TI NTVIGVGDDCISIGPGT+KVNITGVTCGPGHGISIGSLGRYKDEKD
Sbjct: 343 DGIHMGDSSGVTIENTVIGVGDDCISIGPGTTKVNITGVTCGPGHGISIGSLGRYKDEKD 522
Query: 848 VTDINVKDCTL 880
VTDINVKDCTL
Sbjct: 523 VTDINVKDCTL 555
Score = 162 bits (348), Expect(3) = 8e-091
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +1
Query: 134 ASGPGGSFDITKLGASGNGKTDSTKAVQEAWASACGGTGKQTILIPKGDFLVGQLNFTGP 313
ASGPGGSFDI+KLGASG+GK DSTKAVQEAW SACGGTGKQTILIPKGD+LVG LNFTGP
Sbjct: 136 ASGPGGSFDISKLGASGDGKKDSTKAVQEAWTSACGGTGKQTILIPKGDYLVGPLNFTGP 315
Query: 314 CKGDVTIQVDG 346
CKGDVTIQVDG
Sbjct: 316 CKGDVTIQVDG 348
Score = 160 bits (344), Expect(3) = 4e-088
Identities = 64/77 (83%), Positives = 67/77 (87%)
Frame = -3 / -3
Query: 348 LPSTWMVTSPLQGPVKLSCPTRKSPLGMRIVCFPVPPHADAHASCTAFVLSVLPLPEAPN 169
+PSTWMVTSPL GPVKLS PTR SPLGMRIVCFPVPPHAD HASCTAFVLS LP PEAPN
Sbjct: 350 MPSTWMVTSPLHGPVKLSGPTR*SPLGMRIVCFPVPPHADVHASCTAFVLSFLPSPEAPN 171
Query: 168 LVMSKDPPGPDAFASMP 118
L+MS DPPGPDA + P
Sbjct: 170 LLMSNDPPGPDAAFASP 120
Score = 158 bits (339), Expect(3) = 4e-088
Identities = 64/70 (91%), Positives = 64/70 (91%)
Frame = -3 / -3
Query: 876 VQSLTLMSVTSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVI 697
VQS TLMSVTSFSSLYRPRLPMLMPWPGP VTPVMFTL VPGPMEMQSSPTPMTV MV
Sbjct: 551 VQSFTLMSVTSFSSLYRPRLPMLMPWPGPHVTPVMFTLVVPGPMEMQSSPTPMTVFSMVT 372
Query: 696 PDESPMWMPS 667
PDESPMWMPS
Sbjct: 371 PDESPMWMPS 342
Score = 138 bits (296), Expect(3) = 1e-038
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = +1 / +3
Query: 136 VRAWWVLRHHQVGRLRQWQDRQHEGCAGGMGIGVRRHWEADNPHTQGRLPCRTTQLHRPL 315
VRAW V+RH QVGRLR+ Q+ QHEGCAGGM +GVRRH EAD+PH GRLP RTTQLHRP+
Sbjct: 138 VRAWRVVRHQQVGRLRRRQEGQHEGCAGGMDVGVRRHREADDPHP*GRLPRRTTQLHRPV 317
Query: 316 QGRRDHPGG 342
QGRRDHPGG
Sbjct: 318 QGRRDHPGG 344
Score = 124 bits (266), Expect(3) = 7e-035
Identities = 56/71 (78%), Positives = 59/71 (83%)
Frame = -2 / -2
Query: 346 AIHLDGHVALARACEVELSDKEVALGYEDCLLPSAAARRCPCLLHSLRAVCLAIAGGAQL 167
A+HLDGHVALARA EVE SD+ VAL ED LLP AAARR PCLLHSLRAV LA+AGGAQL
Sbjct: 348 AVHLDGHVALARAGEVEWSDEVVALRDEDRLLPGAAARRRPCLLHSLRAVLLAVAGGAQL 169
Query: 166 GDVEGPTRPGR 134
DVE P RPGR
Sbjct: 168 ADVERPARPGR 136
Score = 103 bits (219), Expect(2) = 1e-025
Identities = 42/55 (76%), Positives = 44/55 (80%)
Frame = -1 / -1
Query: 356 PADCHPPGWSRRPCKGL*S*VVRQGSRPWV*GLSASQCRRTPMPMPPAQPSCCLS 192
P C PPGWSRRPC G *S*VVR+GSRP *G SAS+CRRTP MPPAQPSCC S
Sbjct: 358 PCGCRPPGWSRRPCTGR*S*VVRRGSRP*G*GSSASRCRRTPTSMPPAQPSCCPS 194
Score = 53.3 bits (110), Expect(3) = 4e-088
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -1 / -1
Query: 107 PSHHARCRRGPGGTRLSSHCLCTP 36
PS HAR RR PGG RLSSHCLCTP
Sbjct: 103 PSQHARRRRTPGGRRLSSHCLCTP 32
Score = 46.9 bits (96), Expect(3) = 8e-091
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 25 SRQDGVHKQCDESLVPPGPLLHRAW*EGR 111
+ ++GVH+QCDESL+PPG L RA EGR
Sbjct: 21 TNKNGVHRQCDESLLPPGVRLRRACWEGR 107
Score = 42.3 bits (86), Expect(3) = 1e-038
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +1
Query: 32 KMACTNNAMRALFLLVLFCIVHGEKE 109
KMACT NAMRA FLL C H K+
Sbjct: 28 KMACTGNAMRAFFLLAFVCAAHAGKD 105
Score = 41.8 bits (85), Expect(3) = 7e-035
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / -2
Query: 106 LLTMHDAEEDQEEQGSHRIVCARH 35
L +M A+E QEE+GSHRI CARH
Sbjct: 102 LPSMRGADERQEEEGSHRIACARH 31
Score = 35.9 bits (72), Expect(2) = 1e-025
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = -3 / -3
Query: 111 SSFSPCTMQKRTRRNKALIALFVHAI 34
+SF C Q RR KALIAL VHAI
Sbjct: 107 ASFPACAAQTNARRKKALIALPVHAI 30
Score = 26.3 bits (51), Expect(3) = 7e-035
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = -1 / -1
Query: 695 RMSRPCGCHP 666
R SRPCGC P
Sbjct: 370 RTSRPCGCRP 341
Score = 24.9 bits (48), Expect(3) = 1e-038
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +1 / +3
Query: 898 RPHQGVRGRRLRAHRLQDPLREYQDGGLSQPHLHRH 1005
R H+ R RRL HR +D E+ + H+H
Sbjct: 381 REHRHRRRRRLHLHRPRDDQGEHHRRHMRPRPWHQH 488
>gb|CL149387.1|CL149387 104_330_10777794_114_31353_114 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10777794, DNA
sequence
Length = 711
Score = 225 bits (485), Expect(2) = 2e-089
Identities = 86/134 (64%), Positives = 106/134 (79%)
Frame = +2 / -2
Query: 629 DVTVTAPGDSPNTDGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGI 808
DV +TAPGD NTDG+H+G S+ ++ITN+ IG GDDCIS+GPG+ V + + CGPG GI
Sbjct: 710 DVNITAPGDVENTDGVHVGMSTKVSITNSTIGTGDDCISVGPGSDGVMVNNIICGPGQGI 531
Query: 809 SIGSLGRYKDEKDVTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSAN 988
SIG LGRYKDEKDVTD+ V+DC LKKT GVRIK+YEDA SVLT S + +ENI+ME+ AN
Sbjct: 530 SIGCLGRYKDEKDVTDVTVRDCVLKKTTNGVRIKSYEDAESVLTASHLTFENIRMEEVAN 351
Query: 989 PIFIDMKYCPNKLC 1030
PI ID +CP K+C
Sbjct: 350 PIIIDQYFCPEKVC 309
Score = 169 bits (364), Expect(2) = 3e-062
Identities = 79/134 (58%), Positives = 90/134 (67%)
Frame = -3 / +1
Query: 1029 HNLLGQYFMSMKMGLAESSILIFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSV 850
H GQ + SM MG A SSIL+FS + VST++ASSY LMRTP +VFL QS T+ SV
Sbjct: 310 HTFSGQKYWSMMMGFATSSILMFSKVRCDAVSTDSASSYDLMRTPLVVFLSTQSRTVTSV 489
Query: 849 TSFSSLYRPRLPMLMPWPGPQVTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMP 670
TSFSSL RPR PMLMP PGPQ+ T +PGP EMQSSP PM LVM+ + P W P
Sbjct: 490 TSFSSL*RPRQPMLMPCPGPQMMLFTMTPSLPGPTEMQSSPVPMVELVMLTLVDIPTWTP 669
Query: 669 SVLGLSPGAVTVTS 628
SV SPGAV TS
Sbjct: 670 SVFSTSPGAVMFTS 711
Score = 127 bits (272), Expect(2) = 2e-089
Identities = 49/73 (67%), Positives = 63/73 (86%)
Frame = +2 / -2
Query: 1043 ASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPCTGVTMDDVNVEYSGTNNKTMAICTNA 1222
+S V VKDVTF+NITGTSSTP+A+SLLC+ PC+GV++ DVNVEY+G NNKTMA+C+NA
Sbjct: 290 SSHVIVKDVTFRNITGTSSTPQAISLLCSQSQPCSGVSLIDVNVEYAGKNNKTMAVCSNA 111
Query: 1223 KGSTKGCLKELAC 1261
KG+ KG ++ LAC
Sbjct: 110 KGTAKGSVEALAC 72
Score = 92.3 bits (195), Expect(2) = 3e-062
Identities = 42/76 (55%), Positives = 51/76 (67%)
Frame = -3 / +1
Query: 1263 KHASSLRQPLVLPLAFVHIAMVLLLVPLYSTLTSSMVTPVHGTLAVQSRLTASGVEEVPV 1084
+HA + PL +PLA +H AMVLL +P YST TS TP+HG QSRL A GV++VPV
Sbjct: 70 RHARASTLPLAVPLALLHTAMVLLFLPAYSTFTSMSDTPLHGCDCEQSRLMACGVDDVPV 249
Query: 1083 MFLKVTSLTVTLEAPL 1036
M VTSLT+T E L
Sbjct: 250 MLRNVTSLTMT*EESL 297
>gb|BH246023.1|BH246023 pSB1633.1 S. bicolor BTx623 PstI-digested total genomic DNA library
Sorghum bicolor genomic clone pSB1633 similar to PG gene
for polygalacturonase (X66422), DNA sequence
Length = 479
Score = 331 bits (717), Expect = 2e-089
Identities = 131/159 (82%), Positives = 145/159 (91%)
Frame = +2 / -1
Query: 668 DGIHMGDSSGITITNTVIGVGDDCISIGPGTSKVNITGVTCGPGHGISIGSLGRYKDEKD 847
DGIH+GDSS +TIT T IGVGDDCISIGPG++ +N+TGVTCGPGHGIS+GSLGRYKDEKD
Sbjct: 479 DGIHIGDSSKVTITGTTIGVGDDCISIGPGSTGINVTGVTCGPGHGISVGSLGRYKDEKD 300
Query: 848 VTDINVKDCTLKKTMFGVRIKAYEDAASVLTVSKIHYENIKMEDSANPIFIDMKYCPNKL 1027
VTDINVKDCTLKKT GVRIK+YEDAA V+T SK+HYENI M+D ANPI IDMKYCPNK+
Sbjct: 299 VTDINVKDCTLKKTSNGVRIKSYEDAACVITASKLHYENIAMDDVANPIIIDMKYCPNKI 120
Query: 1028 CTANGASKVTVKDVTFKNITGTSSTPEAVSLLCTAKVPC 1144
CTA G SKVTVKDVTFKNITGTSSTPEAVSLLC+ K+PC
Sbjct: 119 CTAKGDSKVTVKDVTFKNITGTSSTPEAVSLLCSDKIPC 3
Score = 270 bits (583), Expect = 6e-071
Identities = 121/159 (76%), Positives = 131/159 (82%)
Frame = -3 / +1
Query: 1146 VHGTLAVQSRLTASGVEEVPVMFLKVTSLTVTLEAPLAVHNLLGQYFMSMKMGLAESSIL 967
+ G L+ QSRLTASGV+EVPVMFL VTSLTVTLE+PLAV LLGQYFMSM MGLA SS+
Sbjct: 1 LQGILSEQSRLTASGVDEVPVMFLNVTSLTVTLESPLAVQILLGQYFMSMMMGLATSSMA 180
Query: 966 IFS*WILETVSTEAASSYALMRTPNIVFLRVQSLTLMSVTSFSSLYRPRLPMLMPWPGPQ 787
+FS*W LE V T AASS L+RTP +VFL VQSLTLMSVTSFSSLY PRLP LMPWPGPQ
Sbjct: 181 MFS*WSLEAVITHAASS*DLIRTPLLVFLSVQSLTLMSVTSFSSLYLPRLPTLMPWPGPQ 360
Query: 786 VTPVMFTLEVPGPMEMQSSPTPMTVLVMVIPDESPMWMP 670
VTPV +PGPMEMQSSPTPM V VMV +ESPMWMP
Sbjct: 361 VTPVTLIPVLPGPMEMQSSPTPMVVPVMVTLEESPMWMP 477
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,838,405,983
Number of Sequences: 832831
Number of extensions: 29785764
Number of successful extensions: 266877
Number of sequences better than 1.0e-020: 185
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 56933937720
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)