TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594433.2.1
(766 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BF587835.1|BF587835 FM1_33_G06.g1_A003 Floral-Induced Me... 316 6e-089
gb|BG356900.1|BG356900 OV2_11_D08.g1_A002 Ovary 2 (OV2) Sor... 312 5e-084
gb|CW458016.1|CW458016 fsbb001f204b14f0 Sorghum methylation... 147 1e-075
gb|BG240756.1|BG240756 OV1_37_H04.g1_A002 Ovary 1 (OV1) Sor... 256 7e-068
gb|CW413938.1|CW413938 fsbb001f113f13k0 Sorghum methylation... 147 4e-046
gb|CW135163.1|CW135163 104_519_11117699_148_34826_038 Sorgh... 147 9e-045
gb|CW135162.1|CW135162 104_519_11117699_116_34830_038 Sorgh... 147 2e-044
gb|CW177944.1|CW177944 104_591_11159301_116_36607_087 Sorgh... 114 6e-040
gb|CW155872.1|CW155872 104_558_11146371_116_36363_006 Sorgh... 90 3e-035
gb|CW086375.1|CW086375 104_430_10946936_114_33015_028 Sorgh... 90 3e-035
gb|CW086376.1|CW086376 104_430_10946936_116_33018_028 Sorgh... 90 3e-035
gb|CW291515.1|CW291515 104_771_11413593_148_35573_043 Sorgh... 90 3e-035
gb|CW291514.1|CW291514 104_771_11413593_116_35569_043 Sorgh... 84 8e-034
gb|CW228616.1|CW228616 104_668_11206476_148_37249_038 Sorgh... 101 3e-021
>gb|BF587835.1|BF587835 FM1_33_G06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 607
Score = 316 bits (684), Expect(3) = 6e-089
Identities = 128/148 (86%), Positives = 136/148 (91%)
Frame = -1 / +1
Query: 697 TCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSA 518
TCNKKVTE FGSGYWCEGCQKNDSECSLRYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSA
Sbjct: 1 TCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSA 180
Query: 517 DELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAES 338
DELDRIRKEEGDDSY LKLKEATWVPHLFRVSVTQHEY NEKRQRITVRSEAPV++AAES
Sbjct: 181 DELDRIRKEEGDDSYVLKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAES 360
Query: 337 KYLLEQIAKLTAC**KMQPFWWFVKGCP 254
KYLLE+IAKLTAC* +W+ + P
Sbjct: 361 KYLLEEIAKLTAC*KMQSFWWFVKEDWP 444
Score = 259 bits (561), Expect(4) = 2e-077
Identities = 112/135 (82%), Positives = 121/135 (89%)
Frame = +2 / -2
Query: 293 LLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQS 472
LLASSKLR LFKQVLGFSC++DR FTPH D LPFLV VFMLCDADAE+VRNPGGFLEL++
Sbjct: 405 LLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLCDADAEKVRNPGGFLELEN 226
Query: 473 ITVVPLLFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ*AFRVILLASLA 652
+TV+ LLFPDPIKLV AAANDLL MLVEH PCL S I DL+DHDVSQ*AFRV+LLASL
Sbjct: 225 VTVIALLFPDPIKLVSAAANDLLGMLVEHGHPCLTSGIRDLEDHDVSQ*AFRVVLLASLT 46
Query: 653 PVSRSKSFSHLLVAG 697
PVSRSKSFSHLLVAG
Sbjct: 45 PVSRSKSFSHLLVAG 1
Score = 248 bits (537), Expect(2) = 7e-069
Identities = 110/159 (69%), Positives = 117/159 (73%)
Frame = +3 / -3
Query: 219 YRSAKTQREHLGGQPLTNHQKGCIFY*QAVSFAICSSRYLDSAACSTGASLLTVILCLFS 398
Y S + H+ GQ + + +*QAVSFAI SSRYLDSAA STGASLLTVILCLFS
Sbjct: 479 YSSKPLRGNHIRGQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFS 300
Query: 399 LLYSCCVTLTRNR*GTQVASLSFRAXXXXXXXXXXXXXXXXXQPMIFSACSLNTETHASP 578
+YSCCVTLTR R*GTQVASLS R QPMIFSACSLNT+THASP
Sbjct: 299 FMYSCCVTLTRKR*GTQVASLSLRT*LSSPSSFLIRSSSSALQPMIFSACSLNTDTHASP 120
Query: 579 VGSETLTTMMYLSEHSESFFWHPSHQYPDPKVSVTFLLQ 695
VGSE L TMMYLSEHSESFFWHPSHQYPDPK SVTFLLQ
Sbjct: 119 VGSEILRTMMYLSEHSESFFWHPSHQYPDPKASVTFLLQ 3
Score = 241 bits (521), Expect(2) = 5e-065
Identities = 112/152 (73%), Positives = 120/152 (78%)
Frame = -3 / +3
Query: 695 LQQEGD*NFWIWILVRGMPKE*LGMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRR 516
LQQEGD*+FWIWILV GMPKE L MLTEIHHG Q L S+W GMG+ VQRACREDHWLQR
Sbjct: 3 LQQEGD*SFWIWILV*GMPKERL*MLTEIHHGPQDL*SHW*GMGVRVQRACREDHWLQR* 182
Query: 515 RA*SDQERGGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQ 336
RA*SDQERGG QL S+AQGSHLGSSP PRQRHTA*I REKAE+H EE*S GR S*IQ
Sbjct: 183 RA*SDQERGGR*QLRSQAQGSHLGSSPFPRQRHTA*IHEREKAEDHREE*STGRLCS*IQ 362
Query: 335 VPA*TDSEAYCLLVEDATFLVVR*GLPSEMFP 240
VPA* D EAYCLL + +V GL +M P
Sbjct: 363 VPA*RDREAYCLLEDAIFLVVREGGLAPDMVP 458
Score = 182 bits (392), Expect(3) = 1e-049
Identities = 86/108 (79%), Positives = 87/108 (80%)
Frame = -2 / +2
Query: 654 GARDAKRMTRNAH*DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKRRGTTV 475
G RDAKR T NAH*DTSWSSRS I L RHG CSTSM RRSLAAA TSLIGSGKRR TV
Sbjct: 44 GVRDAKRTTLNAH*DTSWSSRSLIPLVRHGCPCSTSMPRRSLAAALTSLIGSGKRRAMTV 223
Query: 474 ML*SSRKPPGFLTCSASASHSMNTITRKGRESL*GVKRRSSTQLNPST 331
SSRKPPGFLT SASASHSMNT TRKGR S *GVK RS+ QLNPST
Sbjct: 224 TFSSSRKPPGFLTFSASASHSMNT*TRKGRGSP*GVKHRSTMQLNPST 367
Score = 165 bits (355), Expect(2) = 3e-053
Identities = 76/103 (73%), Positives = 83/103 (80%)
Frame = +1 / -1
Query: 241 GNISEGSP*RTTRKVASSTSKQ*ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV* 420
G IS SP T + +S+SKQ*AS S+QAGTWIQL +RP LHSS+* SAFSR CIHAV*
Sbjct: 457 GTISGASPPSRTTRKIASSSKQ*ASRSLQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAV* 278
Query: 421 R*RGTGEEPRWLP*ASEHNCRPPPLS*SDQARRRCSQ*SSLHA 549
R*RG GEEPRWLP*A E NC PPLS*SDQAR+RCSQ*SS HA
Sbjct: 277 R*RGKGEEPRWLP*A*ERNCHRPPLS*SDQARQRCSQ*SSRHA 149
Score = 64.8 bits (135), Expect(2) = 3e-053
Identities = 27/31 (87%), Positives = 27/31 (87%)
Frame = +1 / -1
Query: 604 *CISVSIPSHSFGIPRTSIQIQKFQSPSCCR 696
*CISVSI S SFGIP TSIQIQK QSPSCCR
Sbjct: 94 *CISVSIQSRSFGIPHTSIQIQKLQSPSCCR 2
Score = 36.8 bits (74), Expect(4) = 2e-077
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +1 / -2
Query: 145 LHASCLNCPSICCLTSR*PNLYI 213
LHASCLNC + LTSR* ++YI
Sbjct: 603 LHASCLNCIASVVLTSR*TSIYI 535
Score = 33.6 bits (67), Expect(2) = 7e-069
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2 / -3
Query: 146 FMHHA*TVLASVA*HQGNQTSTYILQ 223
FMHHA*TV + HQG STY+ +
Sbjct: 602 FMHHA*TV*HLLCLHQGEPASTYLTE 525
Score = 29.9 bits (59), Expect(3) = 6e-089
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -2 / +1
Query: 213 YVEVWLP*CQATDARTVQA*CMK 145
YV+ P*C+ TVQA*CMK
Sbjct: 535 YVDAGSP*CKHNRCYTVQA*CMK 603
Score = 29.5 bits (58), Expect(3) = 1e-049
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 295 *KMQPFWWFVK 263
*KMQ FWWFVK
Sbjct: 400 *KMQSFWWFVK 432
Score = 29.5 bits (58), Expect(4) = 2e-077
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 263 LNEPPERLHLLLAS 304
L+EPPERLHLL +S
Sbjct: 432 LHEPPERLHLLASS 391
Score = 28.1 bits (55), Expect(2) = 5e-065
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1 / +3
Query: 214 ICRGLVTLMSSNRC*DSSSMMHEA 143
ICR TLM + + SSSMMHEA
Sbjct: 534 ICRCWFTLM*AQQMLYSSSMMHEA 605
Score = 24.9 bits (48), Expect(3) = 1e-049
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -3 / +2
Query: 212 M*RFGYLDVKQQMLGQFKHDA*SV 141
M* +LDV QFKHDA*S+
Sbjct: 536 M*MLVHLDVSTTDAIQFKHDA*SL 607
Score = 22.6 bits (43), Expect(3) = 6e-089
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 247 CSLWVLALL*DI 212
CS W LALL*D+
Sbjct: 503 CSHWSLALL*DM 538
Score = 22.1 bits (42), Expect(4) = 2e-077
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / -2
Query: 207 LHISYRSAKTQRE 245
++ISYRSAK Q E
Sbjct: 543 IYISYRSAKDQ*E 505
>gb|BG356900.1|BG356900 OV2_11_D08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 463
Score = 312 bits (675), Expect = 5e-084
Identities = 122/128 (95%), Positives = 125/128 (97%)
Frame = -1 / +3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLRYIMVVKVSDPTGEAWVSV 557
+KPDQNMWYRACKTCNKKVTE FGSGYWCEGCQKNDSECSLRYIMV+K+SDPTGEAWVSV
Sbjct: 51 IKPDQNMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLRYIMVLKISDPTGEAWVSV 230
Query: 556 FNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRIT 377
FNEHAEKIIGCSADELDRIRKEEGDDSY LKLKEATWVPHLFRVSVTQHEY NEKRQRIT
Sbjct: 231 FNEHAEKIIGCSADELDRIRKEEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRIT 410
Query: 376 VRSEAPVE 353
VRSEAPVE
Sbjct: 411 VRSEAPVE 434
Score = 238 bits (514), Expect(2) = 6e-063
Identities = 100/130 (76%), Positives = 104/130 (80%)
Frame = +3 / -1
Query: 354 STGASLLTVILCLFSLLYSCCVTLTRNR*GTQVASLSFRAXXXXXXXXXXXXXXXXXQPM 533
STGASLLTVILCLFS +YSCCVTLTR R*GTQVASLS R QPM
Sbjct: 433 STGASLLTVILCLFSFMYSCCVTLTRKR*GTQVASLSLRM*LSSPSSFLIRSSSSALQPM 254
Query: 534 IFSACSLNTETHASPVGSETLTTMMYLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARY 713
IFSACSLNT+THASPVGSE L T+MYLSEHSESFFWHPSHQYPDPK SVTFLLQVLQARY
Sbjct: 253 IFSACSLNTDTHASPVGSEILRTIMYLSEHSESFFWHPSHQYPDPKASVTFLLQVLQARY 74
Query: 714 HMFWSGLXGL 743
H+FWSGL L
Sbjct: 73 HIFWSGLMWL 44
Score = 237 bits (512), Expect(2) = 2e-062
Identities = 103/127 (81%), Positives = 112/127 (88%)
Frame = +2 / -3
Query: 356 DRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQSITVVPLLFPDPIKLVGAAAND 535
DR FTPH D LPFLV VFML DADAE+VRNPGGFLEL+++TV+ LLFPDPIKLV AAAND
Sbjct: 431 DRCFTPHGDPLPFLVHVFMLRDADAEKVRNPGGFLELENVTVIALLFPDPIKLVSAAAND 252
Query: 536 LLCMLVEHRDPCLASRIGDLDDHDVSQ*AFRVILLASLAPVSRSKSFSHLLVAGLASTVP 715
LL MLVEH PCL S I DL+DH VSQ*AFRV+LLASL PVSRSKSFSHLLVAGLASTVP
Sbjct: 251 LLSMLVEHGHPCLTSGIRDLEDHYVSQ*AFRVVLLASLTPVSRSKSFSHLLVAGLASTVP 72
Query: 716 HVLVRLE 736
H+LVRL+
Sbjct: 71 HILVRLD 51
Score = 225 bits (486), Expect = 6e-058
Identities = 101/127 (79%), Positives = 108/127 (85%)
Frame = -3 / +2
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEIHHGRQGLRSYWRGMGLCV 555
QA*PE+VVPCLQDLQQEGD*+FWIWILV GMPKE L MLTEIH+G Q L S+W GMG+ V
Sbjct: 53 QA*PEYVVPCLQDLQQEGD*SFWIWILV*GMPKERL*MLTEIHNGPQDL*SHW*GMGVRV 232
Query: 554 QRACREDHWLQRRRA*SDQERGGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHC 375
QRAC EDHWLQR RA*SDQERGG QL S+AQGSHLGSSP PRQRH A*I REKAE+H
Sbjct: 233 QRAC*EDHWLQR*RA*SDQERGGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHR 412
Query: 374 EE*SAGR 354
EE*S GR
Sbjct: 413 EE*STGR 433
Score = 187 bits (402), Expect = 2e-046
Identities = 93/130 (71%), Positives = 95/130 (73%)
Frame = -2 / +1
Query: 741 SXSSLTRTCGTVLARPAXXXXXXXXXXXTGARDAKRMTRNAH*DTSWSSRSPILLARHGS 562
+ SSLTR CGTVLARPA TG RDAKR T NAH*DT WSSRS I L RHG
Sbjct: 46 ATSSLTRICGTVLARPATRR*LKLLDLDTGVRDAKRTTLNAH*DT*WSSRSLIPLVRHGC 225
Query: 561 LCSTSMQRRSLAAAPTSLIGSGKRRGTTVML*SSRKPPGFLTCSASASHSMNTITRKGRE 382
CSTSM RRSLAAA TSLIGSGKRR TV SSRKPPGFLT SASAS SMNT TRKGR
Sbjct: 226 PCSTSMLRRSLAAALTSLIGSGKRRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRG 405
Query: 381 SL*GVKRRSS 352
S *GVK RS+
Sbjct: 406 SP*GVKHRSN 435
Score = 117 bits (251), Expect(2) = 2e-046
Identities = 53/65 (81%), Positives = 55/65 (84%)
Frame = +1 / -2
Query: 355 RPALHSSQ*FSAFSRYCIHAV*R*RGTGEEPRWLP*ASEHNCRPPPLS*SDQARRRCSQ* 534
RP LHSS+* SAFSR CIHA *R*RG GEEPRWLP*A E NC PPLS*SDQAR+RCSQ*
Sbjct: 432 RPVLHSSR*SSAFSRSCIHAA*R*RGKGEEPRWLP*A*ECNCHRPPLS*SDQARQRCSQ* 253
Query: 535 SSLHA 549
SS HA
Sbjct: 252 SSQHA 238
Score = 89.5 bits (189), Expect(2) = 2e-046
Identities = 36/41 (87%), Positives = 36/41 (87%)
Frame = +1 / -2
Query: 607 CISVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTTCSGQ 729
CISVSI S SFGIP TSIQIQK QSPSCCRSCKHGTT SGQ
Sbjct: 180 CISVSIQSRSFGIPHTSIQIQKLQSPSCCRSCKHGTTYSGQ 58
Score = 24.4 bits (47), Expect(2) = 6e-063
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 326 KQVLGFSCVL 355
KQVLGFSC++
Sbjct: 462 KQVLGFSCIV 433
Score = 23.5 bits (45), Expect(2) = 2e-062
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 325 QAGTWIQLRA 354
QAGTWIQL +
Sbjct: 463 QAGTWIQLHS 434
>gb|CW458016.1|CW458016 fsbb001f204b14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f204b14, DNA
sequence
Length = 738
Score = 147 bits (315), Expect(3) = 1e-075
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = -1 / -1
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQHEY NEKRQRITVRSEAPV++AAESKYLLE+IA
Sbjct: 327 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 148
Query: 313 KLTAC**KMQPFWWFVKGCP 254
KLTAC* +W+ + P
Sbjct: 147 KLTAC*KMQSFWWFVKEDWP 88
Score = 127 bits (272), Expect(3) = 1e-062
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = +1 / +3
Query: 241 GNISEGSP*RTTRKVASSTSKQ*ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV* 420
G IS SP T + +S+SKQ*AS S+QAGTWIQL +RP LHSS+* SAFSR CIHA *
Sbjct: 75 GTISGASPPSRTTRKIASSSKQ*ASRSLQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA* 254
Query: 421 R*RGTGEEPRWLP*ASEHNCRPPP 492
R*RG GEEPRWLP*A E NC PP
Sbjct: 255 R*RGKGEEPRWLP*A*ECNCHRPP 326
Score = 126 bits (269), Expect(5) = 3e-075
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +2 / +1
Query: 293 LLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQS 472
LLASSKLR LFKQVLGFSC++DR FTPH D LPFLV VFML DADAE+VRNPGGFLEL++
Sbjct: 127 LLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVRNPGGFLELEN 306
Query: 473 ITVVPLL 493
+TV+ LL
Sbjct: 307 VTVIALL 327
Score = 119 bits (254), Expect(2) = 4e-042
Identities = 55/75 (73%), Positives = 60/75 (80%)
Frame = +3 / +2
Query: 246 HLGGQPLTNHQKGCIFY*QAVSFAICSSRYLDSAACSTGASLLTVILCLFSLLYSCCVTL 425
H+ GQ + + +*QAVSFAI SSRYLDSAA STGASLLTVILCLFS +YSCCVTL
Sbjct: 80 HIRGQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFSFMYSCCVTL 259
Query: 426 TRNR*GTQVASLSFR 470
TR R*GTQVASLS R
Sbjct: 260 TRKR*GTQVASLSLR 304
Score = 111 bits (237), Expect(3) = 1e-056
Identities = 55/84 (65%), Positives = 60/84 (71%)
Frame = -3 / -3
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+AQGSHLGSSP PRQRH A*I REKAE+H EE*S GR S*IQVPA* D E
Sbjct: 325 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 146
Query: 311 AYCLLVEDATFLVVR*GLPSEMFP 240
AYCLL + +V GL +M P
Sbjct: 145 AYCLLEDAIFLVVREGGLAPDMVP 74
Score = 102 bits (218), Expect(3) = 1e-075
Identities = 36/37 (97%), Positives = 36/37 (97%)
Frame = -1 / -2
Query: 721 NMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
NMWYRACKTCNKKVTE FGSGYWCEGCQKNDSECSLR
Sbjct: 737 NMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLR 627
Score = 101 bits (215), Expect(3) = 1e-043
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = -1 / -2
Query: 646 GCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
G + + S RYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE
Sbjct: 587 GAKSDCFPASFRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 432
Score = 96.4 bits (204), Expect(5) = 3e-075
Identities = 36/38 (94%), Positives = 37/38 (97%)
Frame = +3 / +1
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMF 722
YLSEHSESFFWHPSHQYPDPK SVTFLLQVLQARYH+F
Sbjct: 625 YLSEHSESFFWHPSHQYPDPKASVTFLLQVLQARYHIF 738
Score = 85.8 bits (181), Expect(3) = 1e-043
Identities = 41/54 (75%), Positives = 42/54 (77%)
Frame = -2 / -2
Query: 492 RRGTTVML*SSRKPPGFLTCSASASHSMNTITRKGRESL*GVKRRSSTQLNPST 331
RR TV SSRKPPGFLT SASAS SMNT TRKGR S *GVK RS+ QLNPST
Sbjct: 326 RRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPST 165
Score = 78.5 bits (165), Expect(3) = 1e-056
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = -3 / -1
Query: 722 EHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEI 609
E+VVPCLQDLQQEGD*+FWIWILV GMPKE L MLTE+
Sbjct: 738 EYVVPCLQDLQQEGD*SFWIWILV*GMPKERL*MLTEV 625
Score = 77.6 bits (163), Expect(3) = 1e-062
Identities = 31/35 (88%), Positives = 31/35 (88%)
Frame = +1 / +2
Query: 613 SVSIPSHSFGIPRTSIQIQKFQSPSCCRSCKHGTT 717
SVSI S SFGIP TSIQIQK QSPSCCRSCKHGTT
Sbjct: 629 SVSIQSRSFGIPHTSIQIQKLQSPSCCRSCKHGTT 733
Score = 76.2 bits (160), Expect(2) = 4e-042
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2 / +3
Query: 614 Q*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHV 721
Q*AFRV+LLASL PVSRSKSFSHLLVAGLASTVPH+
Sbjct: 630 Q*AFRVVLLASLTPVSRSKSFSHLLVAGLASTVPHI 737
Score = 75.3 bits (158), Expect(3) = 1e-062
Identities = 32/42 (76%), Positives = 34/42 (80%)
Frame = +2 / +3
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
LFPDPIKLV AAANDLL MLVEH PCL S I DL+DH VS+
Sbjct: 432 LFPDPIKLVSAAANDLLSMLVEHGHPCLTSGIRDLEDHYVSE 557
Score = 74.4 bits (156), Expect(3) = 1e-075
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = -3 / -1
Query: 620 LTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
+ +IH+G Q L S+W GMG+ VQRAC EDHWLQR RA*SDQERG
Sbjct: 561 ILQIHNGPQDL*SHW*GMGVRVQRAC*EDHWLQR*RA*SDQERG 430
Score = 70.3 bits (147), Expect(3) = 1e-056
Identities = 33/41 (80%), Positives = 33/41 (80%)
Frame = -2 / -3
Query: 612 DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKR 490
DT WSSRS I L RHG CSTSM RRSLAAA TSLIGSGKR
Sbjct: 553 DT*WSSRSLIPLVRHGCPCSTSMLRRSLAAALTSLIGSGKR 431
Score = 66.1 bits (138), Expect(5) = 3e-075
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +3 / +1
Query: 525 QPMIFSACSLNTETHASPVGSETLTTMMYLSE 620
QPMIFSACSLNT+THASPVGSE L T+MYL +
Sbjct: 466 QPMIFSACSLNTDTHASPVGSEILRTIMYLKD 561
Score = 40.9 bits (83), Expect(5) = 3e-075
Identities = 18/20 (90%), Positives = 19/20 (95%)
Frame = +1 / +2
Query: 490 PLS*SDQARRRCSQ*SSLHA 549
PLS*SDQAR+RCSQ*SS HA
Sbjct: 431 PLS*SDQARQRCSQ*SSQHA 490
Score = 29.5 bits (58), Expect(3) = 1e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 295 *KMQPFWWFVK 263
*KMQ FWWFVK
Sbjct: 132 *KMQSFWWFVK 100
Score = 29.5 bits (58), Expect(5) = 3e-075
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / +1
Query: 263 LNEPPERLHLLLAS 304
L+EPPERLHLL +S
Sbjct: 100 LHEPPERLHLLASS 141
>gb|BG240756.1|BG240756 OV1_37_H04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 538
Score = 256 bits (554), Expect(2) = 7e-068
Identities = 107/126 (84%), Positives = 115/126 (91%)
Frame = -1 / +3
Query: 631 DSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYALKLKEA 452
DSECSLRYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSY LKLKEA
Sbjct: 3 DSECSLRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKEEGDDSYILKLKEA 182
Query: 451 TWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIAKLTAC**KMQPFWW 272
TWVPHLFRVSVTQHEY NEKRQRITVRSEAPV++AAESKYLLE+IAKLTAC* +W+
Sbjct: 183 TWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIAKLTAC*KMQSFWWF 362
Query: 271 FVKGCP 254
+ P
Sbjct: 363 VKEDWP 380
Score = 207 bits (446), Expect(4) = 9e-059
Identities = 90/113 (79%), Positives = 98/113 (86%)
Frame = +2 / -3
Query: 293 LLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQS 472
LLASSKLR LFKQVLGFSC++DR FTPH D LPFLV VFML DADAE+VRNPGGFLEL++
Sbjct: 341 LLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVRNPGGFLELEN 162
Query: 473 ITVVPLLFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ*AFRV 631
+TV+ LLFPDPIKLV AAANDLL MLVEH PCL S I DL+DH VSQ*AFRV
Sbjct: 161 VTVIALLFPDPIKLVSAAANDLLSMLVEHGHPCLTSGIRDLEDHYVSQ*AFRV 3
Score = 192 bits (413), Expect = 7e-048
Identities = 89/138 (64%), Positives = 97/138 (70%)
Frame = +3 / -1
Query: 219 YRSAKTQREHLGGQPLTNHQKGCIFY*QAVSFAICSSRYLDSAACSTGASLLTVILCLFS 398
Y S + H+ GQ + + +*QAVSFAI SSRYLDSAA STGASLLTVILCLFS
Sbjct: 415 YSSKPLRGNHIRGQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFS 236
Query: 399 LLYSCCVTLTRNR*GTQVASLSFRAXXXXXXXXXXXXXXXXXQPMIFSACSLNTETHASP 578
+YSCCVTLTR R*GTQVASLS R QPMIFSACSLNT+THASP
Sbjct: 235 FMYSCCVTLTRKR*GTQVASLSLRM*LSSPSSFLIRSSSSALQPMIFSACSLNTDTHASP 56
Query: 579 VGSETLTTMMYLSEHSES 632
VGSE L T+MYLSEHSES
Sbjct: 55 VGSEILRTIMYLSEHSES 2
Score = 187 bits (403), Expect = 2e-046
Identities = 89/128 (69%), Positives = 97/128 (75%)
Frame = -3 / +2
Query: 623 MLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERGGGRQLCSEAQGSHLG 444
MLTEIH+G Q L S+W GMG+ VQRAC EDHWLQR RA*SDQERGG QL S+AQGSHLG
Sbjct: 11 MLTEIHNGPQDL*SHW*GMGVRVQRAC*EDHWLQR*RA*SDQERGGR*QLHSQAQGSHLG 190
Query: 443 SSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSEAYCLLVEDATFLVVR* 264
SSP PRQRH A*I REKAE+H EE*S GR S*IQVPA* D EAYCLL + +V
Sbjct: 191 SSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDREAYCLLEDAIFLVVREG 370
Query: 263 GLPSEMFP 240
GL +M P
Sbjct: 371 GLAPDMVP 394
Score = 162 bits (348), Expect(3) = 6e-040
Identities = 75/103 (72%), Positives = 82/103 (79%)
Frame = +1 / -2
Query: 241 GNISEGSP*RTTRKVASSTSKQ*ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV* 420
G IS SP T + +S+SKQ*AS S+QAGTWIQL +RP LHSS+* SAFSR CIHA *
Sbjct: 393 GTISGASPPSRTTRKIASSSKQ*ASRSLQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA* 214
Query: 421 R*RGTGEEPRWLP*ASEHNCRPPPLS*SDQARRRCSQ*SSLHA 549
R*RG GEEPRWLP*A E NC PPLS*SDQAR+RCSQ*SS HA
Sbjct: 213 R*RGKGEEPRWLP*A*ECNCHRPPLS*SDQARQRCSQ*SSQHA 85
Score = 160 bits (345), Expect(2) = 2e-041
Identities = 78/100 (78%), Positives = 79/100 (79%)
Frame = -2 / +1
Query: 630 TRNAH*DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKRRGTTVML*SSRKP 451
T NAH*DT WSSRS I L RHG CSTSM RRSLAAA TSLIGSGKRR TV SSRKP
Sbjct: 4 TLNAH*DT*WSSRSLIPLVRHGCPCSTSMLRRSLAAALTSLIGSGKRRAMTVTFSSSRKP 183
Query: 450 PGFLTCSASASHSMNTITRKGRESL*GVKRRSSTQLNPST 331
PGFLT SASAS SMNT TRKGR S *GVK RS+ QLNPST
Sbjct: 184 PGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPST 303
Score = 29.5 bits (58), Expect(2) = 2e-041
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 295 *KMQPFWWFVK 263
*KMQ FWWFVK
Sbjct: 336 *KMQSFWWFVK 368
Score = 29.5 bits (58), Expect(4) = 9e-059
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 263 LNEPPERLHLLLAS 304
L+EPPERLHLL +S
Sbjct: 368 LHEPPERLHLLASS 327
Score = 26.7 bits (52), Expect(4) = 9e-059
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +1 / -2
Query: 157 CLNCPSICC 183
CLNC SICC
Sbjct: 528 CLNCHSICC 502
Score = 22.6 bits (43), Expect(2) = 7e-068
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 247 CSLWVLALL*DI 212
CS W LALL*D+
Sbjct: 439 CSHWSLALL*DM 474
Score = 22.1 bits (42), Expect(3) = 6e-040
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 207 LHISYRSAKTQRE 245
++ISYRSAK Q E
Sbjct: 479 IYISYRSAKDQ*E 441
Score = 22.1 bits (42), Expect(4) = 9e-059
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2 / -1
Query: 188 HQGNQTSTYILQ 223
HQG TSTY+ +
Sbjct: 496 HQGEPTSTYLTE 461
Score = 21.7 bits (41), Expect(3) = 6e-040
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 153 IMLELS*HLL 182
+MLELS*HLL
Sbjct: 532 LMLELS*HLL 503
>gb|CW413938.1|CW413938 fsbb001f113f13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f113f13, DNA
sequence
Length = 579
Score = 147 bits (315), Expect(5) = 4e-046
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = -1 / +3
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQHEY NEKRQRITVRSEAPV++AAESKYLLE+IA
Sbjct: 93 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 272
Query: 313 KLTAC**KMQPFWWFVKGCP 254
KLTAC* +W+ + P
Sbjct: 273 KLTAC*KMQSFWWFVKEDWP 332
Score = 127 bits (272), Expect(3) = 8e-034
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = +1 / -1
Query: 241 GNISEGSP*RTTRKVASSTSKQ*ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV* 420
G IS SP T + +S+SKQ*AS S+QAGTWIQL +RP LHSS+* SAFSR CIHA *
Sbjct: 345 GTISGASPPSRTTRKIASSSKQ*ASRSLQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA* 166
Query: 421 R*RGTGEEPRWLP*ASEHNCRPPP 492
R*RG GEEPRWLP*A E NC PP
Sbjct: 165 R*RGKGEEPRWLP*A*ECNCHRPP 94
Score = 126 bits (269), Expect(6) = 4e-044
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +2 / -2
Query: 293 LLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQS 472
LLASSKLR LFKQVLGFSC++DR FTPH D LPFLV VFML DADAE+VRNPGGFLEL++
Sbjct: 293 LLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVRNPGGFLELEN 114
Query: 473 ITVVPLL 493
+TV+ LL
Sbjct: 113 VTVIALL 93
Score = 122 bits (260), Expect(2) = 3e-030
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +3 / -3
Query: 219 YRSAKTQREHLGGQPLTNHQKGCIFY*QAVSFAICSSRYLDSAACSTGASLLTVILCLFS 398
Y S + H+ GQ + + +*QAVSFAI SSRYLDSAA STGASLLTVILCLFS
Sbjct: 367 YSSKPLRGNHIRGQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFS 188
Query: 399 LLYSCCVTLTRNR*GTQVASLSFR 470
+YSCCVTLTR R*GTQVASLS R
Sbjct: 187 FMYSCCVTLTRKR*GTQVASLSLR 116
Score = 111 bits (237), Expect(3) = 1e-029
Identities = 55/84 (65%), Positives = 60/84 (71%)
Frame = -3 / +2
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+AQGSHLGSSP PRQRH A*I REKAE+H EE*S GR S*IQVPA* D E
Sbjct: 95 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 274
Query: 311 AYCLLVEDATFLVVR*GLPSEMFP 240
AYCLL + +V GL +M P
Sbjct: 275 AYCLLEDAIFLVVREGGLAPDMVP 346
Score = 39.1 bits (79), Expect(5) = 4e-046
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = -1 / +1
Query: 103 PCQCNFVEQIVRIIRTN*WCQ 41
PC C+FVEQI R+I+TN CQ
Sbjct: 511 PCLCSFVEQIARVIKTNS*CQ 573
Score = 38.2 bits (77), Expect(6) = 4e-044
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = +3 / -2
Query: 39 T*HHQLVLIILTICSTKLHWHG 104
T*HH+LVLI L ICSTKL G
Sbjct: 575 T*HHELVLITLAICSTKLQRQG 510
Score = 36.8 bits (74), Expect(3) = 1e-029
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -3 / +3
Query: 104 SVPMQLC*ANSEDY*D*LMVSG 39
S+ +QLC*ANSE Y*D* M+SG
Sbjct: 510 SLSLQLC*ANSEGY*D*FMMSG 575
Score = 33.6 bits (67), Expect(3) = 8e-034
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = +2 / -1
Query: 35 RDLTPSISPNNPHYLLNKVALARKYGTRELK 127
R+LT IS NNP YLLNK A R K
Sbjct: 579 RNLTS*ISLNNPRYLLNKAAETRNRNCNSAK 487
Score = 33.1 bits (66), Expect(2) = 3e-030
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1 / -3
Query: 40 PDTIN*S**SSLFAQQSC 93
PD +N*S** SLFAQQSC
Sbjct: 574 PDIMN*S**PSLFAQQSC 521
Score = 30.4 bits (60), Expect(6) = 4e-044
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 151 ASCLNCPSICC 183
ASCLNC SICC
Sbjct: 486 ASCLNCHSICC 454
Score = 29.5 bits (58), Expect(6) = 4e-044
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 263 LNEPPERLHLLLAS 304
L+EPPERLHLL +S
Sbjct: 320 LHEPPERLHLLASS 279
Score = 27.6 bits (54), Expect(5) = 4e-046
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -1 / +2
Query: 151 HEAFAELQFQF 119
HEAFAELQF+F
Sbjct: 479 HEAFAELQFRF 511
Score = 23.5 bits (45), Expect(3) = 1e-029
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -3 / +1
Query: 152 A*SVCRIAVSVP 117
A*S+CRIAV +P
Sbjct: 478 A*SLCRIAVPIP 513
Score = 23.5 bits (45), Expect(5) = 4e-046
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +2
Query: 182 QQMLGQFKHDA 150
QQML QFKH+A
Sbjct: 455 QQML*QFKHEA 487
Score = 23.5 bits (45), Expect(6) = 4e-044
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +1 / -2
Query: 100 TEIRNEGTETAIRQTLHA 153
T+++ +G TAI Q LHA
Sbjct: 530 TKLQRQGIGTAILQRLHA 477
Score = 22.6 bits (43), Expect(5) = 4e-046
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 247 CSLWVLALL*DI 212
CS W LALL*D+
Sbjct: 391 CSHWSLALL*DM 426
Score = 22.6 bits (43), Expect(6) = 4e-044
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / -2
Query: 207 LHISYRSAKTQRE 245
++ISYRSAK Q E
Sbjct: 431 IYISYRSAKDQCE 393
Score = 22.1 bits (42), Expect(3) = 8e-034
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2 / -3
Query: 188 HQGNQTSTYILQ 223
HQG TSTY+ +
Sbjct: 448 HQGEPTSTYLTE 413
>gb|CW135163.1|CW135163 104_519_11117699_148_34826_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117699, DNA
sequence
Length = 563
Score = 147 bits (315), Expect(5) = 9e-045
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = -1 / -3
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQHEY NEKRQRITVRSEAPV++AAESKYLLE+IA
Sbjct: 414 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 235
Query: 313 KLTAC**KMQPFWWFVKGCP 254
KLTAC* +W+ + P
Sbjct: 234 KLTAC*KMQSFWWFVKEDWP 175
Score = 127 bits (272), Expect(3) = 1e-033
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = +1 / +3
Query: 241 GNISEGSP*RTTRKVASSTSKQ*ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV* 420
G IS SP T + +S+SKQ*AS S+QAGTWIQL +RP LHSS+* SAFSR CIHA *
Sbjct: 162 GTISGASPPSRTTRKIASSSKQ*ASRSLQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA* 341
Query: 421 R*RGTGEEPRWLP*ASEHNCRPPP 492
R*RG GEEPRWLP*A E NC PP
Sbjct: 342 R*RGKGEEPRWLP*A*ECNCHRPP 413
Score = 126 bits (269), Expect(5) = 3e-041
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +2 / +1
Query: 293 LLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQS 472
LLASSKLR LFKQVLGFSC++DR FTPH D LPFLV VFML DADAE+VRNPGGFLEL++
Sbjct: 214 LLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVRNPGGFLELEN 393
Query: 473 ITVVPLL 493
+TV+ LL
Sbjct: 394 VTVIALL 414
Score = 122 bits (260), Expect = 9e-027
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +3 / +2
Query: 219 YRSAKTQREHLGGQPLTNHQKGCIFY*QAVSFAICSSRYLDSAACSTGASLLTVILCLFS 398
Y S + H+ GQ + + +*QAVSFAI SSRYLDSAA STGASLLTVILCLFS
Sbjct: 140 YSSKPLRGNHIRGQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFS 319
Query: 399 LLYSCCVTLTRNR*GTQVASLSFR 470
+YSCCVTLTR R*GTQVASLS R
Sbjct: 320 FMYSCCVTLTRKR*GTQVASLSLR 391
Score = 111 bits (237), Expect(2) = 3e-028
Identities = 55/84 (65%), Positives = 60/84 (71%)
Frame = -3 / -2
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+AQGSHLGSSP PRQRH A*I REKAE+H EE*S GR S*IQVPA* D E
Sbjct: 412 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 233
Query: 311 AYCLLVEDATFLVVR*GLPSEMFP 240
AYCLL + +V GL +M P
Sbjct: 232 AYCLLEDAIFLVVREGGLAPDMVP 161
Score = 85.8 bits (181), Expect(3) = 9e-023
Identities = 41/54 (75%), Positives = 42/54 (77%)
Frame = -2 / -1
Query: 492 RRGTTVML*SSRKPPGFLTCSASASHSMNTITRKGRESL*GVKRRSSTQLNPST 331
RR TV SSRKPPGFLT SASAS SMNT TRKGR S *GVK RS+ QLNPST
Sbjct: 413 RRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPST 252
Score = 37.7 bits (76), Expect(5) = 9e-045
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -1 / -1
Query: 535 IIGCSADELDRIRKE 491
IIGCSADELDRIRKE
Sbjct: 563 IIGCSADELDRIRKE 519
Score = 35.4 bits (71), Expect(5) = 3e-041
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = +2 / +3
Query: 491 LFPDPIKLVGAAAND 535
LFPDPIKLV AAAND
Sbjct: 519 LFPDPIKLVSAAAND 563
Score = 35.0 bits (70), Expect(2) = 3e-028
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3 / -3
Query: 533 HWLQRRRA*SDQERG 489
HWLQR RA*SDQERG
Sbjct: 561 HWLQR*RA*SDQERG 517
Score = 32.7 bits (65), Expect(3) = 1e-033
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = +1 / +2
Query: 490 PLS*SDQARRRCSQ* 534
PLS*SDQAR+RCSQ*
Sbjct: 518 PLS*SDQARQRCSQ* 562
Score = 30.4 bits (60), Expect(5) = 3e-041
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 151 ASCLNCPSICC 183
ASCLNC SICC
Sbjct: 21 ASCLNCHSICC 53
Score = 30.4 bits (60), Expect(3) = 9e-023
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2 / -2
Query: 534 SLAAAPTSLIGSGKR 490
SLAAA TSLIGSGKR
Sbjct: 562 SLAAALTSLIGSGKR 518
Score = 29.5 bits (58), Expect(3) = 9e-023
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 295 *KMQPFWWFVK 263
*KMQ FWWFVK
Sbjct: 219 *KMQSFWWFVK 187
Score = 29.5 bits (58), Expect(5) = 3e-041
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / +1
Query: 263 LNEPPERLHLLLAS 304
L+EPPERLHLL +S
Sbjct: 187 LHEPPERLHLLASS 228
Score = 24.4 bits (47), Expect(5) = 9e-045
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -2
Query: 151 HEAFAELQF 125
HEAFAELQF
Sbjct: 28 HEAFAELQF 2
Score = 23.5 bits (45), Expect(5) = 9e-045
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 182 QQMLGQFKHDA 150
QQML QFKH+A
Sbjct: 52 QQML*QFKHEA 20
Score = 22.6 bits (43), Expect(5) = 9e-045
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / -1
Query: 247 CSLWVLALL*DI 212
CS W LALL*D+
Sbjct: 116 CSHWSLALL*DM 81
Score = 22.1 bits (42), Expect(3) = 1e-033
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / +1
Query: 207 LHISYRSAKTQRE 245
++ISYRSAK Q E
Sbjct: 76 IYISYRSAKDQ*E 114
Score = 22.1 bits (42), Expect(5) = 3e-041
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 188 HQGNQTSTYILQ 223
HQG TSTY+ +
Sbjct: 59 HQGEPTSTYLTE 94
>gb|CW135162.1|CW135162 104_519_11117699_116_34830_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117699, DNA
sequence
Length = 563
Score = 147 bits (315), Expect(5) = 2e-044
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = -1 / +1
Query: 493 EEGDDSYALKLKEATWVPHLFRVSVTQHEYNNEKRQRITVRSEAPVEHAAESKYLLEQIA 314
+EGDDSY LKLKEATWVPHLFRVSVTQHEY NEKRQRITVRSEAPV++AAESKYLLE+IA
Sbjct: 148 QEGDDSYILKLKEATWVPHLFRVSVTQHEYMNEKRQRITVRSEAPVDYAAESKYLLEEIA 327
Query: 313 KLTAC**KMQPFWWFVKGCP 254
KLTAC* +W+ + P
Sbjct: 328 KLTAC*KMQSFWWFVKEDWP 387
Score = 127 bits (272), Expect(3) = 2e-033
Identities = 58/84 (69%), Positives = 64/84 (76%)
Frame = +1 / -2
Query: 241 GNISEGSP*RTTRKVASSTSKQ*ASLSVQAGTWIQLRARPALHSSQ*FSAFSRYCIHAV* 420
G IS SP T + +S+SKQ*AS S+QAGTWIQL +RP LHSS+* SAFSR CIHA *
Sbjct: 400 GTISGASPPSRTTRKIASSSKQ*ASRSLQAGTWIQLHSRPVLHSSR*SSAFSRSCIHAA* 221
Query: 421 R*RGTGEEPRWLP*ASEHNCRPPP 492
R*RG GEEPRWLP*A E NC PP
Sbjct: 220 R*RGKGEEPRWLP*A*ECNCHRPP 149
Score = 126 bits (269), Expect(5) = 2e-040
Identities = 53/67 (79%), Positives = 60/67 (89%)
Frame = +2 / -3
Query: 293 LLASSKLRYLFKQVLGFSCVLDRRFTPHSDSLPFLVIVFMLCDADAEQVRNPGGFLELQS 472
LLASSKLR LFKQVLGFSC++DR FTPH D LPFLV VFML DADAE+VRNPGGFLEL++
Sbjct: 348 LLASSKLRDLFKQVLGFSCIVDRCFTPHGDPLPFLVHVFMLRDADAEKVRNPGGFLELEN 169
Query: 473 ITVVPLL 493
+TV+ LL
Sbjct: 168 VTVIALL 148
Score = 122 bits (260), Expect = 9e-027
Identities = 57/84 (67%), Positives = 63/84 (75%)
Frame = +3 / -1
Query: 219 YRSAKTQREHLGGQPLTNHQKGCIFY*QAVSFAICSSRYLDSAACSTGASLLTVILCLFS 398
Y S + H+ GQ + + +*QAVSFAI SSRYLDSAA STGASLLTVILCLFS
Sbjct: 422 YSSKPLRGNHIRGQSSFTNHQKDCIF*QAVSFAISSSRYLDSAA*STGASLLTVILCLFS 243
Query: 399 LLYSCCVTLTRNR*GTQVASLSFR 470
+YSCCVTLTR R*GTQVASLS R
Sbjct: 242 FMYSCCVTLTRKR*GTQVASLSLR 171
Score = 111 bits (237), Expect(2) = 3e-028
Identities = 55/84 (65%), Positives = 60/84 (71%)
Frame = -3 / +3
Query: 491 GGGRQLCSEAQGSHLGSSPVPRQRHTA*IQ*REKAENHCEE*SAGRARS*IQVPA*TDSE 312
GG QL S+AQGSHLGSSP PRQRH A*I REKAE+H EE*S GR S*IQVPA* D E
Sbjct: 150 GGR*QLHSQAQGSHLGSSPFPRQRHAA*IHEREKAEDHREE*STGRLCS*IQVPA*RDRE 329
Query: 311 AYCLLVEDATFLVVR*GLPSEMFP 240
AYCLL + +V GL +M P
Sbjct: 330 AYCLLEDAIFLVVREGGLAPDMVP 401
Score = 85.8 bits (181), Expect(3) = 3e-022
Identities = 41/54 (75%), Positives = 42/54 (77%)
Frame = -2 / +2
Query: 492 RRGTTVML*SSRKPPGFLTCSASASHSMNTITRKGRESL*GVKRRSSTQLNPST 331
RR TV SSRKPPGFLT SASAS SMNT TRKGR S *GVK RS+ QLNPST
Sbjct: 149 RRAMTVTFSSSRKPPGFLTFSASASRSMNT*TRKGRGSP*GVKHRSTMQLNPST 310
Score = 35.9 bits (72), Expect(5) = 2e-044
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / +2
Query: 532 IGCSADELDRIRKE 491
IGCSADELDRIRKE
Sbjct: 2 IGCSADELDRIRKE 43
Score = 35.0 bits (70), Expect(2) = 3e-028
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 533 HWLQRRRA*SDQERG 489
HWLQR RA*SDQERG
Sbjct: 1 HWLQR*RA*SDQERG 45
Score = 32.7 bits (65), Expect(5) = 2e-040
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +2 / -2
Query: 491 LFPDPIKLVGAAAN 532
LFPDPIKLV AAAN
Sbjct: 43 LFPDPIKLVSAAAN 2
Score = 32.2 bits (64), Expect(3) = 2e-033
Identities = 13/14 (92%), Positives = 14/14 (100%)
Frame = +1 / -1
Query: 490 PLS*SDQARRRCSQ 531
PLS*SDQAR+RCSQ
Sbjct: 44 PLS*SDQARQRCSQ 3
Score = 30.4 bits (60), Expect(5) = 2e-040
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -2
Query: 151 ASCLNCPSICC 183
ASCLNC SICC
Sbjct: 541 ASCLNCHSICC 509
Score = 29.5 bits (58), Expect(3) = 3e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 295 *KMQPFWWFVK 263
*KMQ FWWFVK
Sbjct: 343 *KMQSFWWFVK 375
Score = 29.5 bits (58), Expect(5) = 2e-040
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +2 / -3
Query: 263 LNEPPERLHLLLAS 304
L+EPPERLHLL +S
Sbjct: 375 LHEPPERLHLLASS 334
Score = 28.6 bits (56), Expect(3) = 3e-022
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / +3
Query: 531 LAAAPTSLIGSGKR 490
LAAA TSLIGSGKR
Sbjct: 3 LAAALTSLIGSGKR 44
Score = 24.9 bits (48), Expect(5) = 2e-044
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -1 / +3
Query: 151 HEAFAELQFQ 122
HEAFAELQF+
Sbjct: 534 HEAFAELQFR 563
Score = 23.5 bits (45), Expect(5) = 2e-044
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 182 QQMLGQFKHDA 150
QQML QFKH+A
Sbjct: 510 QQML*QFKHEA 542
Score = 22.6 bits (43), Expect(5) = 2e-044
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -1 / +2
Query: 247 CSLWVLALL*DI 212
CS W LALL*D+
Sbjct: 446 CSHWSLALL*DM 481
Score = 22.1 bits (42), Expect(3) = 2e-033
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3 / -3
Query: 207 LHISYRSAKTQRE 245
++ISYRSAK Q E
Sbjct: 486 IYISYRSAKDQ*E 448
Score = 22.1 bits (42), Expect(5) = 2e-040
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2 / -1
Query: 188 HQGNQTSTYILQ 223
HQG TSTY+ +
Sbjct: 503 HQGEPTSTYLTE 468
>gb|CW177944.1|CW177944 104_591_11159301_116_36607_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159301, DNA
sequence
Length = 690
Score = 114 bits (243), Expect(2) = 6e-040
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -1 / -2
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KPDQNMWYRACKTCNKKVTE FGSGYWCEGCQKNDSECSLR
Sbjct: 320 IKPDQNMWYRACKTCNKKVTEAFGSGYWCEGCQKNDSECSLR 195
Score = 108 bits (230), Expect(2) = 1e-038
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +3 / +1
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHSESFFWHPSHQYPDPK SVTFLLQVLQARYH+FWSGL L
Sbjct: 193 YLSEHSESFFWHPSHQYPDPKASVTFLLQVLQARYHIFWSGLMWL 327
Score = 86.3 bits (182), Expect(2) = 2e-030
Identities = 36/42 (85%), Positives = 39/42 (92%)
Frame = -3 / -1
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLTEI 609
QA*PE+VVPCLQDLQQEGD*+FWIWILV GMPKE L MLTE+
Sbjct: 318 QA*PEYVVPCLQDLQQEGD*SFWIWILV*GMPKERL*MLTEV 193
Score = 84.9 bits (179), Expect(2) = 1e-029
Identities = 37/41 (90%), Positives = 40/41 (97%)
Frame = +2 / +3
Query: 614 Q*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
Q*AFRV+LLASL PVSRSKSFSHLLVAGLASTVPH+LVRL+
Sbjct: 198 Q*AFRVVLLASLTPVSRSKSFSHLLVAGLASTVPHILVRLD 320
Score = 73.5 bits (154), Expect(2) = 1e-038
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = +2 / +3
Query: 494 FPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
FPDPIKLV AAANDLL MLVEH PCL S I DL+DH VS+
Sbjct: 3 FPDPIKLVSAAANDLLSMLVEHGHPCLTSGIRDLEDHYVSE 125
Score = 71.6 bits (150), Expect(2) = 6e-040
Identities = 30/43 (69%), Positives = 35/43 (81%)
Frame = -3 / -1
Query: 620 LTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQER 492
+ +IH+G Q L S+W GMG+ VQRAC EDHWLQR RA*SDQER
Sbjct: 129 ILQIHNGPQDL*SHW*GMGVRVQRAC*EDHWLQR*RA*SDQER 1
Score = 68.0 bits (142), Expect(2) = 2e-030
Identities = 32/40 (80%), Positives = 32/40 (80%)
Frame = -2 / -3
Query: 612 DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGK 493
DT WSSRS I L RHG CSTSM RRSLAAA TSLIGSGK
Sbjct: 121 DT*WSSRSLIPLVRHGCPCSTSMLRRSLAAALTSLIGSGK 2
Score = 66.1 bits (138), Expect(2) = 1e-029
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +3 / +1
Query: 525 QPMIFSACSLNTETHASPVGSETLTTMMYLSE 620
QPMIFSACSLNT+THASPVGSE L T+MYL +
Sbjct: 34 QPMIFSACSLNTDTHASPVGSEILRTIMYLKD 129
>gb|CW155872.1|CW155872 104_558_11146371_116_36363_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146371, DNA
sequence
Length = 755
Score = 89.5 bits (189), Expect(2) = 3e-035
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -1 / +3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KP+Q+MWYRACKTC KVTE FGSGYW E C KN SECSLR
Sbjct: 30 IKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 155
Score = 80.8 bits (170), Expect(2) = 3e-035
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = -3 / +1
Query: 629 LGMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
L + +IHHG QG S W GMG VQR CREDHWLQR RA*SDQERG
Sbjct: 211 LPFVLQIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 351
Score = 78.0 bits (164), Expect(2) = 5e-029
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +2 / -2
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
LFPDPIKLV A ANDLLCM VEH +PCL I +LDDHDVS+
Sbjct: 349 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 224
Score = 72.5 bits (152), Expect(3) = 8e-034
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3 / -2
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHSE+F H S QYP+PK SVT L QVLQARYH+ SGL L
Sbjct: 157 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWL 23
Score = 71.2 bits (149), Expect(2) = 5e-029
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2 / -1
Query: 614 Q*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+*AFR IL+ASL PVSR+KSFSHL+ AGLAST+PH+L+RL+
Sbjct: 152 K*AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLD 30
Score = 69.8 bits (146), Expect(2) = 2e-022
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -2 / +3
Query: 612 DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKR 490
DTSWSSR I + RHG CST+MQRRSLA A TSLIGSGKR
Sbjct: 228 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 350
Score = 68.9 bits (144), Expect(3) = 8e-034
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3 / -3
Query: 528 PMIFSACSLNTETHASPVGSETLTTMMYLSEHSE 629
PMIFSACSLNTETHASP+GSETL TMMYL + +
Sbjct: 312 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 211
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / +2
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLT 615
QA* +VV CLQDL Q+GD*+FW WILV M +E L MLT
Sbjct: 32 QA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*MLT 151
Score = 41.8 bits (85), Expect(3) = 8e-034
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -1
Query: 490 PLS*SDQARRRCSQ*SSLH 546
PLS*SDQAR+RCSQ*SSLH
Sbjct: 350 PLS*SDQARQRCSQ*SSLH 294
>gb|CW086375.1|CW086375 104_430_10946936_114_33015_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10946936, DNA
sequence
Length = 708
Score = 89.5 bits (189), Expect(2) = 3e-035
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -1 / -3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KP+Q+MWYRACKTC KVTE FGSGYW E C KN SECSLR
Sbjct: 682 IKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 557
Score = 80.8 bits (170), Expect(2) = 3e-035
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = -3 / -1
Query: 629 LGMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
L + +IHHG QG S W GMG VQR CREDHWLQR RA*SDQERG
Sbjct: 501 LPFVLQIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 361
Score = 78.0 bits (164), Expect(2) = 5e-029
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +2 / +3
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
LFPDPIKLV A ANDLLCM VEH +PCL I +LDDHDVS+
Sbjct: 363 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 488
Score = 72.5 bits (152), Expect(3) = 8e-034
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3 / +3
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHSE+F H S QYP+PK SVT L QVLQARYH+ SGL L
Sbjct: 555 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWL 689
Score = 71.2 bits (149), Expect(2) = 5e-029
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2 / +2
Query: 614 Q*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+*AFR IL+ASL PVSR+KSFSHL+ AGLAST+PH+L+RL+
Sbjct: 560 K*AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLD 682
Score = 69.8 bits (146), Expect(2) = 2e-022
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -2 / -3
Query: 612 DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKR 490
DTSWSSR I + RHG CST+MQRRSLA A TSLIGSGKR
Sbjct: 484 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 362
Score = 68.9 bits (144), Expect(3) = 8e-034
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3 / +1
Query: 528 PMIFSACSLNTETHASPVGSETLTTMMYLSEHSE 629
PMIFSACSLNTETHASP+GSETL TMMYL + +
Sbjct: 400 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 501
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / -2
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLT 615
QA* +VV CLQDL Q+GD*+FW WILV M +E L MLT
Sbjct: 680 QA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*MLT 561
Score = 41.8 bits (85), Expect(3) = 8e-034
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / +2
Query: 490 PLS*SDQARRRCSQ*SSLH 546
PLS*SDQAR+RCSQ*SSLH
Sbjct: 362 PLS*SDQARQRCSQ*SSLH 418
>gb|CW086376.1|CW086376 104_430_10946936_116_33018_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10946936, DNA
sequence
Length = 685
Score = 89.5 bits (189), Expect(2) = 3e-035
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -1 / +1
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KP+Q+MWYRACKTC KVTE FGSGYW E C KN SECSLR
Sbjct: 154 IKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 279
Score = 80.8 bits (170), Expect(2) = 3e-035
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = -3 / +2
Query: 629 LGMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
L + +IHHG QG S W GMG VQR CREDHWLQR RA*SDQERG
Sbjct: 335 LPFVLQIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 475
Score = 78.0 bits (164), Expect(2) = 5e-029
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +2 / -3
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
LFPDPIKLV A ANDLLCM VEH +PCL I +LDDHDVS+
Sbjct: 473 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 348
Score = 72.5 bits (152), Expect(3) = 8e-034
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3 / -3
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHSE+F H S QYP+PK SVT L QVLQARYH+ SGL L
Sbjct: 281 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWL 147
Score = 71.2 bits (149), Expect(2) = 5e-029
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2 / -2
Query: 614 Q*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+*AFR IL+ASL PVSR+KSFSHL+ AGLAST+PH+L+RL+
Sbjct: 276 K*AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLD 154
Score = 69.8 bits (146), Expect(2) = 2e-022
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -2 / +1
Query: 612 DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKR 490
DTSWSSR I + RHG CST+MQRRSLA A TSLIGSGKR
Sbjct: 352 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 474
Score = 68.9 bits (144), Expect(3) = 8e-034
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3 / -1
Query: 528 PMIFSACSLNTETHASPVGSETLTTMMYLSEHSE 629
PMIFSACSLNTETHASP+GSETL TMMYL + +
Sbjct: 436 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 335
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / +3
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLT 615
QA* +VV CLQDL Q+GD*+FW WILV M +E L MLT
Sbjct: 156 QA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*MLT 275
Score = 41.8 bits (85), Expect(3) = 8e-034
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -2
Query: 490 PLS*SDQARRRCSQ*SSLH 546
PLS*SDQAR+RCSQ*SSLH
Sbjct: 474 PLS*SDQARQRCSQ*SSLH 418
>gb|CW291515.1|CW291515 104_771_11413593_148_35573_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11413593, DNA
sequence
Length = 646
Score = 89.5 bits (189), Expect(2) = 3e-035
Identities = 32/42 (76%), Positives = 35/42 (83%)
Frame = -1 / +3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KP+Q+MWYRACKTC KVTE FGSGYW E C KN SECSLR
Sbjct: 219 IKPEQHMWYRACKTCCNKVTEAFGSGYWSERCNKNASECSLR 344
Score = 80.8 bits (170), Expect(2) = 3e-035
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = -3 / +1
Query: 629 LGMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
L + +IHHG QG S W GMG VQR CREDHWLQR RA*SDQERG
Sbjct: 400 LPFVLQIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 540
Score = 78.0 bits (164), Expect(2) = 5e-029
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +2 / -1
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
LFPDPIKLV A ANDLLCM VEH +PCL I +LDDHDVS+
Sbjct: 538 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 413
Score = 72.5 bits (152), Expect(3) = 8e-034
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +3 / -1
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHSE+F H S QYP+PK SVT L QVLQARYH+ SGL L
Sbjct: 346 YLSEHSEAFLLHLSDQYPEPKASVTLLQQVLQARYHICCSGLMWL 212
Score = 71.2 bits (149), Expect(2) = 5e-029
Identities = 30/41 (73%), Positives = 38/41 (92%)
Frame = +2 / -3
Query: 614 Q*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+*AFR IL+ASL PVSR+KSFSHL+ AGLAST+PH+L+RL+
Sbjct: 341 K*AFRGILVASLRPVSRTKSFSHLVAAGLASTIPHMLLRLD 219
Score = 69.8 bits (146), Expect(2) = 2e-022
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -2 / +3
Query: 612 DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKR 490
DTSWSSR I + RHG CST+MQRRSLA A TSLIGSGKR
Sbjct: 417 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 539
Score = 68.9 bits (144), Expect(3) = 8e-034
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3 / -2
Query: 528 PMIFSACSLNTETHASPVGSETLTTMMYLSEHSE 629
PMIFSACSLNTETHASP+GSETL TMMYL + +
Sbjct: 501 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 400
Score = 57.0 bits (118), Expect(2) = 2e-022
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -3 / +2
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLT 615
QA* +VV CLQDL Q+GD*+FW WILV M +E L MLT
Sbjct: 221 QA*AAYVVSCLQDLLQQGD*SFWFWILV*EMQQECL*MLT 340
Score = 41.8 bits (85), Expect(3) = 8e-034
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -3
Query: 490 PLS*SDQARRRCSQ*SSLH 546
PLS*SDQAR+RCSQ*SSLH
Sbjct: 539 PLS*SDQARQRCSQ*SSLH 483
>gb|CW291514.1|CW291514 104_771_11413593_116_35569_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11413593, DNA
sequence
Length = 653
Score = 84.5 bits (178), Expect(2) = 8e-034
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = -1 / -3
Query: 736 LKPDQNMWYRACKTCNKKVTETFGSGYWCEGCQKNDSECSLR 611
+KP+Q+MWYRACKT KVTE FGSGYW E C KN SECSLR
Sbjct: 627 IKPEQHMWYRACKTXCNKVTEAFGSGYWSERCNKNASECSLR 502
Score = 80.8 bits (170), Expect(2) = 8e-034
Identities = 33/47 (70%), Positives = 35/47 (74%)
Frame = -3 / -1
Query: 629 LGMLTEIHHGRQGLRSYWRGMGLCVQRACREDHWLQRRRA*SDQERG 489
L + +IHHG QG S W GMG VQR CREDHWLQR RA*SDQERG
Sbjct: 446 LPFVLQIHHGHQGF*SQW*GMGFRVQRTCREDHWLQR*RA*SDQERG 306
Score = 78.0 bits (164), Expect(2) = 3e-028
Identities = 31/42 (73%), Positives = 34/42 (80%)
Frame = +2 / +2
Query: 491 LFPDPIKLVGAAANDLLCMLVEHRDPCLASRIGDLDDHDVSQ 616
LFPDPIKLV A ANDLLCM VEH +PCL I +LDDHDVS+
Sbjct: 308 LFPDPIKLVSAVANDLLCMFVEHGNPCLTIGIRNLDDHDVSE 433
Score = 69.8 bits (146), Expect(3) = 5e-033
Identities = 30/45 (66%), Positives = 33/45 (73%)
Frame = +3 / +2
Query: 609 YLSEHSESFFWHPSHQYPDPKVSVTFLLQVLQARYHMFWSGLXGL 743
YLSEHSE+F H S QYP+PK SVT L VLQARYH+ SGL L
Sbjct: 500 YLSEHSEAFLLHLSDQYPEPKASVTLLQXVLQARYHICCSGLMWL 634
Score = 69.8 bits (146), Expect(2) = 1e-021
Identities = 31/41 (75%), Positives = 33/41 (80%)
Frame = -2 / -3
Query: 612 DTSWSSRSPILLARHGSLCSTSMQRRSLAAAPTSLIGSGKR 490
DTSWSSR I + RHG CST+MQRRSLA A TSLIGSGKR
Sbjct: 429 DTSWSSRFLIPMVRHGFPCSTNMQRRSLATALTSLIGSGKR 307
Score = 68.9 bits (144), Expect(3) = 5e-033
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = +3 / +3
Query: 528 PMIFSACSLNTETHASPVGSETLTTMMYLSEHSE 629
PMIFSACSLNTETHASP+GSETL TMMYL + +
Sbjct: 345 PMIFSACSLNTETHASPLGSETLMTMMYLKDEGK 446
Score = 68.4 bits (143), Expect(2) = 3e-028
Identities = 29/41 (70%), Positives = 37/41 (90%)
Frame = +2 / +1
Query: 614 Q*AFRVILLASLAPVSRSKSFSHLLVAGLASTVPHVLVRLE 736
+*AFR IL+ASL PVSR+KSFSHL+ A LAST+PH+L+RL+
Sbjct: 505 K*AFRGILVASLRPVSRTKSFSHLVAASLASTIPHMLLRLD 627
Score = 54.7 bits (113), Expect(2) = 1e-021
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = -3 / -2
Query: 734 QA*PEHVVPCLQDLQQEGD*NFWIWILVRGMPKE*LGMLT 615
QA* +VV CLQD Q+GD*+FW WILV M +E L MLT
Sbjct: 625 QA*AAYVVSCLQDXLQQGD*SFWFWILV*EMQQECL*MLT 506
Score = 41.8 bits (85), Expect(3) = 5e-033
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / +1
Query: 490 PLS*SDQARRRCSQ*SSLH 546
PLS*SDQAR+RCSQ*SSLH
Sbjct: 307 PLS*SDQARQRCSQ*SSLH 363
>gb|CW228616.1|CW228616 104_668_11206476_148_37249_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11206476, DNA
sequence
Length = 302
Score = 101 bits (215), Expect(2) = 3e-021
Identities = 41/52 (78%), Positives = 45/52 (86%)
Frame = -1 / +1
Query: 646 GCQKNDSECSLRYIMVVKVSDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 491
G + + S RYIMV+K+SDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE
Sbjct: 4 GAKSDCFPASFRYIMVLKISDPTGEAWVSVFNEHAEKIIGCSADELDRIRKE 159
Score = 21.2 bits (40), Expect(2) = 3e-021
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -1 / +1
Query: 493 EEGDDSYALKLK 458
+EGDDSY +L+
Sbjct: 265 QEGDDSYISQLR 300
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 959,845,123
Number of Sequences: 832831
Number of extensions: 14328967
Number of successful extensions: 102919
Number of sequences better than 1.0e-020: 16
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 23762736400
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)