TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594147.2.1
(744 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN136626.1|CN136626 OX1_44_G12.b1_A002 Oxidatively-stres... 163 2e-080
gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorgh... 198 3e-077
gb|CW155769.1|CW155769 104_558_11146316_116_36370_074 Sorgh... 158 8e-075
gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation... 198 3e-073
gb|CW430464.1|CW430464 fsbb001f144d01f0 Sorghum methylation... 110 2e-050
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 121 4e-046
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 121 9e-045
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 121 9e-045
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 121 9e-045
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 121 9e-045
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 118 3e-044
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 121 4e-044
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 121 4e-044
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 121 4e-044
gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1... 110 8e-044
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 67 1e-043
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 118 1e-043
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 121 1e-043
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 119 2e-043
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 119 2e-043
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 119 2e-043
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 119 2e-043
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 121 2e-043
gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation... 109 3e-043
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 121 5e-043
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 115 2e-042
gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation... 88 2e-042
gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sor... 125 3e-042
gb|CW217957.1|CW217957 104_651_11195928_116_37067_090 Sorgh... 104 4e-042
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 121 4e-042
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 121 2e-041
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 104 7e-041
gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkal... 107 1e-040
gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation... 107 1e-040
gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorgh... 107 1e-040
gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sor... 107 1e-040
gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorgh... 107 1e-040
gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation... 107 1e-040
gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/c... 107 1e-040
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 65 3e-040
gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stres... 107 4e-040
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 102 4e-039
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 102 4e-039
gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorgh... 70 1e-038
gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sor... 99 1e-038
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 101 2e-038
gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkal... 121 3e-038
gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-defici... 90 9e-038
gb|CD223142.1|CD223142 CCC1_26_C06.b1_A007 Callus culture/c... 96 3e-037
gb|CX607383.1|CX607383 ANR1_8_G05.b1_A002 Anaerobic roots S... 95 1e-036
gb|CX616323.1|CX616323 GABR1_27_F04.b1_A002 GA- or brassino... 95 1e-036
gb|CF489807.1|CF489807 POL1_59_F02.g1_A002 Pollen Sorghum b... 122 1e-036
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 69 1e-036
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 93 4e-036
gb|CW269038.1|CW269038 104_740_11401653_116_35318_093 Sorgh... 107 5e-036
gb|CW253166.1|CW253166 104_716_11224935_116_35104_054 Sorgh... 88 6e-035
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 122 2e-034
gb|CD223154.1|CD223154 CCC1_26_F12.b1_A007 Callus culture/c... 85 8e-034
gb|BE361244.1|BE361244 DG1_70_C10.g1_A002 Dark Grown 1 (DG1... 89 1e-033
gb|CN136121.1|CN136121 OX1_40_H11.g1_A002 Oxidatively-stres... 107 2e-033
gb|CD210102.1|CD210102 HS1_57_F11.b1_A012 Heat-shocked seed... 88 3e-033
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 83 4e-033
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 83 4e-033
gb|CN149473.1|CN149473 WOUND1_63_A11.b1_A002 Wounded leaves... 82 5e-033
gb|BZ780043.1|BZ780043 ii36g12.g1 WGS-SbicolorF (DH5a methy... 99 7e-033
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 81 1e-032
gb|CW241491.1|CW241491 104_700_11218800_116_37544_086 Sorgh... 70 2e-032
gb|CN150200.1|CN150200 WOUND1_67_D03.g1_A002 Wounded leaves... 119 2e-032
gb|BG049047.1|BG049047 OV1_22_E11.g1_A002 Ovary 1 (OV1) Sor... 92 2e-032
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 122 2e-032
gb|CX609949.1|CX609949 ANR1_15_F01.g1_A002 Anaerobic roots ... 121 2e-032
gb|CN123868.1|CN123868 RHOH1_1_F04.b1_A002 Acid- and alkali... 88 5e-032
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 73 8e-032
gb|CX616412.1|CX616412 GABR1_27_F04.g1_A002 GA- or brassino... 107 9e-032
gb|CW300425.1|CW300425 104_783_11463650_148_36247_001 Sorgh... 80 9e-032
gb|CW038650.1|CW038650 104_271_10505052_114_30387 Sorghum m... 80 1e-031
gb|CX610446.1|CX610446 ANR1_18_F11.g1_A002 Anaerobic roots ... 120 2e-031
gb|CD463889.1|CD463889 ETH1_47_B11.b1_A002 Ethylene-treated... 80 2e-031
gb|BG048321.1|BG048321 OV1_16_G02.g1_A002 Ovary 1 (OV1) Sor... 80 2e-031
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 79 2e-031
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 71 4e-031
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 122 4e-031
gb|CW233768.1|CW233768 104_687_11213622_116_37380_027 Sorgh... 61 5e-031
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 70 5e-031
gb|CN130196.1|CN130196 RHOH1_39_H10.g1_A002 Acid- and alkal... 118 6e-031
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 79 6e-031
gb|CD227127.1|CD227127 CCC1_4_A10.b1_A007 Callus culture/ce... 80 8e-031
gb|CD223643.1|CD223643 CCC1_29_B07.b1_A007 Callus culture/c... 80 1e-030
gb|BG159424.1|BG159424 OV2_7_F12.g1_A002 Ovary 2 (OV2) Sorg... 80 1e-030
gb|CD227727.1|CD227727 CCC1_53_C01.b1_A007 Callus culture/c... 80 1e-030
gb|CN127679.1|CN127679 RHOH1_24_A06.g3_A002 Acid- and alkal... 107 3e-030
gb|CW437579.1|CW437579 fsbb001f154m08f0 Sorghum methylation... 107 3e-030
gb|BG048752.1|BG048752 OV1_22_E11.b1_A002 Ovary 1 (OV1) Sor... 125 3e-030
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 80 5e-030
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 80 5e-030
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 80 5e-030
gb|CD223263.1|CD223263 CCC1_27_E07.b1_A007 Callus culture/c... 80 5e-030
gb|BF657412.1|BF657412 OV2_24_G10.g1_A002 Ovary 2 (OV2) Sor... 80 5e-030
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 77 7e-030
gb|CX606202.1|CX606202 ANR1_1_E07.g1_A002 Anaerobic roots S... 121 1e-029
gb|CN129996.1|CN129996 RHOH1_38_E01.g1_A002 Acid- and alkal... 124 1e-029
gb|CF483096.1|CF483096 POL1_11_F05.b1_A002 Pollen Sorghum b... 78 1e-029
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 80 2e-029
gb|CD221690.1|CD221690 CCC1_70_E10.b1_A007 Callus culture/c... 80 2e-029
gb|CD222137.1|CD222137 CCC1_2_B01.b1_A007 Callus culture/ce... 80 2e-029
gb|CF486514.1|CF486514 POL1_38_D08.b1_A002 Pollen Sorghum b... 76 3e-029
gb|CF489097.1|CF489097 POL1_54_H09.b1_A002 Pollen Sorghum b... 76 3e-029
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 65 3e-029
gb|CF489352.1|CF489352 POL1_57_C07.b1_A002 Pollen Sorghum b... 76 3e-029
gb|CF483197.1|CF483197 POL1_12_H10.b1_A002 Pollen Sorghum b... 76 3e-029
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 65 3e-029
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 79 3e-029
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 65 4e-029
gb|CF488299.1|CF488299 POL1_49_A10.b1_A002 Pollen Sorghum b... 76 4e-029
gb|CW321934.1|CW321934 104_815_11475820_116_35944_008 Sorgh... 114 6e-029
gb|CD227112.1|CD227112 CCC1_4_D07.b1_A007 Callus culture/ce... 80 9e-029
gb|CD225932.1|CD225932 CCC1_42_G10.b1_A007 Callus culture/c... 80 9e-029
gb|CF484704.1|CF484704 POL1_27_A11.b1_A002 Pollen Sorghum b... 76 1e-028
gb|BG049025.1|BG049025 OV1_22_C07.g1_A002 Ovary 1 (OV1) Sor... 79 1e-028
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 80 2e-028
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 80 2e-028
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 80 2e-028
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 80 2e-028
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 80 2e-028
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 75 2e-028
gb|CF487790.1|CF487790 POL1_46_A03.b1_A002 Pollen Sorghum b... 73 2e-028
gb|CF487513.1|CF487513 POL1_44_F08.b1_A002 Pollen Sorghum b... 77 3e-028
gb|CD225094.1|CD225094 CCC1_38_F05.b1_A007 Callus culture/c... 79 3e-028
gb|CN134577.1|CN134577 OX1_27_E09.b1_A002 Oxidatively-stres... 88 4e-028
gb|CD228001.1|CD228001 CCC1_5_B06.b1_A007 Callus culture/ce... 78 4e-028
gb|CF484108.1|CF484108 POL1_3_E05.b1_A002 Pollen Sorghum bi... 76 5e-028
gb|CN134237.1|CN134237 OX1_25_D04.b1_A002 Oxidatively-stres... 88 7e-028
gb|CN134399.1|CN134399 OX1_26_D04.b1_A002 Oxidatively-stres... 88 7e-028
gb|CW189107.1|CW189107 104_610_11173790_116_37100_059 Sorgh... 104 7e-028
gb|CN146372.1|CN146372 WOUND1_39_H03.g1_A002 Wounded leaves... 125 7e-028
gb|CN149549.1|CN149549 WOUND1_63_A11.g1_A002 Wounded leaves... 108 1e-027
gb|CD226829.1|CD226829 CCC1_48_E12.b1_A007 Callus culture/c... 99 1e-027
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 79 1e-027
gb|CW323837.1|CW323837 104_818_11476843_116_35904_078 Sorgh... 66 1e-027
gb|CW041615.1|CW041615 104_275_10506649_114_30284 Sorghum m... 67 1e-027
gb|CF483193.1|CF483193 POL1_12_H04.b1_A002 Pollen Sorghum b... 60 2e-027
gb|CF482202.1|CF482202 POL1_5_B11.g1_A002 Pollen Sorghum bi... 62 3e-027
gb|CF485397.1|CF485397 POL1_31_F11.b1_A002 Pollen Sorghum b... 58 4e-027
gb|CF485229.1|CF485229 POL1_30_E09.b1_A002 Pollen Sorghum b... 73 4e-027
gb|CW335483.1|CW335483 104_834_11483062_148_36104_089 Sorgh... 110 5e-027
gb|CX610193.1|CX610193 ANR1_17_E04.b1_A002 Anaerobic roots ... 108 5e-027
gb|CW359786.1|CW359786 fsbb001f027j03k0 Sorghum methylation... 110 5e-027
gb|CF487622.1|CF487622 POL1_44_H12.g1_A002 Pollen Sorghum b... 68 6e-027
gb|CN128214.1|CN128214 RHOH1_27_G06.g1_A002 Acid- and alkal... 122 6e-027
gb|AW677546.1|AW677546 DG1_8_G07.b1_A002 Dark Grown 1 (DG1)... 107 1e-026
gb|CF489893.1|CF489893 POL1_61_F05.b1_A002 Pollen Sorghum b... 60 1e-026
gb|CF483416.1|CF483416 POL1_22_D07.b1_A002 Pollen Sorghum b... 76 2e-026
gb|CF487484.1|CF487484 POL1_44_C08.b1_A002 Pollen Sorghum b... 73 2e-026
gb|BZ367428.1|BZ367428 id04d05.g1 WGS-SbicolorF (JM107 adap... 80 3e-026
gb|CD219585.1|CD219585 CCC1_57_C04.g1_A007 Callus culture/c... 119 4e-026
gb|CF489991.1|CF489991 POL1_61_G05.g1_A002 Pollen Sorghum b... 60 5e-026
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 80 6e-026
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 80 6e-026
gb|CF483683.1|CF483683 POL1_24_B02.b1_A002 Pollen Sorghum b... 73 9e-026
gb|CF480166.1|CF480166 POL1_64_D03.b1_A002 Pollen Sorghum b... 73 1e-025
gb|CD430458.1|CD430458 ETH1_19_F11.b1_A002 Ethylene-treated... 94 2e-025
gb|CF481823.1|CF481823 POL1_74_H05.b1_A002 Pollen Sorghum b... 52 2e-025
gb|BG559187.1|BG559187 RHIZ2_55_F12.g1_A003 Rhizome2 (RHIZ2... 80 3e-025
gb|CN127255.1|CN127255 RHOH1_22_A01.b1_A002 Acid- and alkal... 77 4e-025
gb|CW300424.1|CW300424 104_783_11463650_116_36248_001 Sorgh... 107 6e-025
gb|CF489366.1|CF489366 POL1_57_D11.b1_A002 Pollen Sorghum b... 52 6e-025
gb|CL159722.1|CL159722 104_349_10804467_116_31382_291 Sorgh... 114 1e-024
gb|CW247381.1|CW247381 104_708_11221754_116_36078_009 Sorgh... 114 1e-024
gb|CF481642.1|CF481642 POL1_73_D12.b1_A002 Pollen Sorghum b... 54 2e-024
gb|CW154770.1|CW154770 104_557_11145777_148_36360_047 Sorgh... 114 2e-024
gb|CW354064.1|CW354064 fsbb001f017b11k0 Sorghum methylation... 113 4e-024
gb|AW287233.2|AW287233 LG1_268_C03.b1_A002 Light Grown 1 (L... 113 4e-024
gb|BE358945.1|BE358945 DG1_37_C09.b1_A002 Dark Grown 1 (DG1... 113 4e-024
gb|CW039698.1|CW039698 104_272_10505645_114_30389 Sorghum m... 67 4e-024
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 65 5e-024
gb|CW480555.1|CW480555 fsbb001f239k22f0 Sorghum methylation... 88 7e-024
gb|CF480333.1|CF480333 POL1_65_D03.b1_A002 Pollen Sorghum b... 78 1e-023
gb|CF480745.1|CF480745 POL1_67_D07.g1_A002 Pollen Sorghum b... 76 1e-023
gb|CF487995.1|CF487995 POL1_47_D10.b1_A002 Pollen Sorghum b... 76 1e-023
gb|CF482205.1|CF482205 POL1_5_C03.g1_A002 Pollen Sorghum bi... 60 1e-023
gb|CW233769.1|CW233769 104_687_11213622_148_37379_027 Sorgh... 70 2e-023
gb|CW335482.1|CW335482 104_834_11483062_116_36083_089 Sorgh... 110 2e-023
gb|CX610279.1|CX610279 ANR1_17_E04.g1_A002 Anaerobic roots ... 110 2e-023
gb|BZ339450.1|BZ339450 ic32c10.b1 WGS-SbicolorF (JM107 adap... 61 2e-023
gb|CW147025.1|CW147025 104_540_11139300_116_34999_046 Sorgh... 60 5e-023
gb|CL191208.1|CL191208 104_410_10906632_114_32533_096 Sorgh... 66 5e-023
gb|CF488022.1|CF488022 POL1_47_G06.b1_A002 Pollen Sorghum b... 74 5e-023
gb|CW229188.1|CW229188 104_670_11207171_116_37259_042 Sorgh... 66 5e-023
gb|CD430578.1|CD430578 ETH1_19_F11.g1_A002 Ethylene-treated... 109 6e-023
gb|CF484397.1|CF484397 POL1_25_C05.b1_A002 Pollen Sorghum b... 76 6e-023
gb|CW423090.1|CW423090 fsbb001f132l21f0 Sorghum methylation... 108 8e-023
gb|CW046679.1|CW046679 104_284_10512277_114_30219 Sorghum m... 108 1e-022
gb|CF483493.1|CF483493 POL1_22_D09.g1_A002 Pollen Sorghum b... 60 2e-022
gb|CL177774.1|CL177774 104_385_10894067_116_31914_131 Sorgh... 107 2e-022
gb|CF487538.1|CF487538 POL1_44_H12.b1_A002 Pollen Sorghum b... 76 2e-022
gb|CD227862.1|CD227862 CCC1_56_H03.b1_A007 Callus culture/c... 79 2e-022
gb|CW186182.1|CW186182 104_604_11166433_116_36705_013 Sorgh... 107 2e-022
gb|CW417495.1|CW417495 fsbb001f120i17f0 Sorghum methylation... 57 3e-022
gb|CW428522.1|CW428522 fsbb001f141e10k0 Sorghum methylation... 57 3e-022
gb|CF486512.1|CF486512 POL1_38_D06.b1_A002 Pollen Sorghum b... 76 3e-022
gb|CF483976.1|CF483976 POL1_2_G04.b1_A002 Pollen Sorghum bi... 76 3e-022
gb|CW140343.1|CW140343 104_530_11135731_148_34916_066 Sorgh... 57 3e-022
gb|CN133273.1|CN133273 OX1_11_E08.b1_A002 Oxidatively-stres... 88 7e-022
gb|CF483102.1|CF483102 POL1_11_F12.b1_A002 Pollen Sorghum b... 51 1e-021
gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum m... 80 1e-021
gb|CF486890.1|CF486890 POL1_40_A11.g1_A002 Pollen Sorghum b... 60 1e-021
gb|CX607987.1|CX607987 ANR1_32_A06.b1_A002 Anaerobic roots ... 57 1e-021
gb|CN126050.1|CN126050 RHOH1_14_H04.g1_A002 Acid- and alkal... 81 1e-021
gb|CW399257.1|CW399257 fsbb001f089a13f0 Sorghum methylation... 104 2e-021
gb|CD431281.1|CD431281 ETH1_7_B06.g1_A002 Ethylene-treated ... 104 2e-021
gb|CN133353.1|CN133353 OX1_11_E08.g1_A002 Oxidatively-stres... 104 2e-021
gb|CX606182.1|CX606182 ANR1_1_C10.g1_A002 Anaerobic roots S... 104 2e-021
gb|CX614568.1|CX614568 GABR1_14_H01.g1_A002 GA- or brassino... 104 2e-021
gb|CX616580.1|CX616580 GABR1_28_F03.g1_A002 GA- or brassino... 104 2e-021
gb|CX620407.1|CX620407 GABR1_51_E02.g1_A002 GA- or brassino... 103 3e-021
gb|CF489520.1|CF489520 POL1_58_C06.b1_A002 Pollen Sorghum b... 54 3e-021
gb|CF489774.1|CF489774 POL1_59_C03.g1_A002 Pollen Sorghum b... 60 3e-021
gb|CF483417.1|CF483417 POL1_22_D08.b1_A002 Pollen Sorghum b... 51 3e-021
gb|BI139612.1|BI139612 IP1_46_G07.g1_A002 Immature pannicle... 80 4e-021
gb|CD220860.1|CD220860 CCC1_72_B03.b1_A007 Callus culture/c... 80 4e-021
gb|CF483980.1|CF483980 POL1_2_G08.b1_A002 Pollen Sorghum bi... 73 5e-021
gb|CX607460.1|CX607460 ANR1_8_G05.g1_A002 Anaerobic roots S... 102 5e-021
gb|CW333019.1|CW333019 104_830_11481720_116_36037_082 Sorgh... 59 6e-021
gb|CF482434.1|CF482434 POL1_7_A01.b1_A002 Pollen Sorghum bi... 76 7e-021
gb|CD227465.1|CD227465 CCC1_51_H01.g1_A007 Callus culture/c... 102 7e-021
gb|CD236070.1|CD236070 SS1_25_E11.g1_A012 Salt-stressed see... 102 7e-021
gb|CF486340.1|CF486340 POL1_37_D08.b1_A002 Pollen Sorghum b... 51 9e-021
>gb|CN136626.1|CN136626 OX1_44_G12.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_44_G12_A002 3', mRNA sequence
Length = 795
Score = 163 bits (350), Expect(2) = 2e-080
Identities = 66/89 (74%), Positives = 73/89 (82%)
Frame = -1 / +2
Query: 738 DCPCPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGS 559
D C +E HFDMSGTAFGA+AKPG QLR AG +QIQYTRVQCEWPGVDVTFSV+ GS
Sbjct: 29 DGMCLNEGAHFDMSGTAFGAMAKPGMADQLRAAGLLQIQYTRVQCEWPGVDVTFSVDSGS 208
Query: 558 NPNYLAVLIEYEDSDSALDSVDMMQTQGG 472
NPNYLAVLIEYEDS+S L +VD+MQ G
Sbjct: 209 NPNYLAVLIEYEDSESDLSAVDIMQNSAG 295
Score = 158 bits (339), Expect(2) = 2e-080
Identities = 61/81 (75%), Positives = 71/81 (87%)
Frame = -1 / +2
Query: 471 TTGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRSGG 292
+ GQWVPMQ SWGA+W+++SGS L GPF++RLTFSSGR L+ASNAIPAGW GVAYR+GG
Sbjct: 287 SAGQWVPMQHSWGAIWRLDSGSALHGPFHLRLTFSSGRVLIASNAIPAGWTPGVAYRAGG 466
Query: 291 VAVTRARPRSGACRGYEAAGT 229
VAVTRARPRSG R +EAAGT
Sbjct: 467 VAVTRARPRSGGGRIHEAAGT 529
Score = 139 bits (299), Expect(2) = 8e-060
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +2 / -1
Query: 215 TKPSSVPAAS*PRQAPLLGLALVTATPPDRYATPAFHPAGMALLATSALPELKVRRMLKG 394
TK +VPAAS R PLLGLALVTATPP RYATP HPAGMALLA S LPEL VRR G
Sbjct: 543 TKLLNVPAASWIRPPPLLGLALVTATPPARYATPGVHPAGMALLAMSTLPELNVRRRWNG 364
Query: 395 PWRTEPELIFHTAPHDCCIGTHCP 466
P R EPE APH+CCIGTHCP
Sbjct: 363 P*RAEPESSLQIAPHECCIGTHCP 292
Score = 112 bits (239), Expect(2) = 8e-060
Identities = 48/86 (55%), Positives = 50/86 (58%)
Frame = +2 / -1
Query: 473 PPCVCIMXXXXXXXXXXXXXXXXXXXFGLEPGSTEKVTSTPGHSHCTRVYWIWMAPAPRS 652
P C+M FG EP STEKVTSTPGHSHCTRVYWI PA RS
Sbjct: 294 PAEFCMMSTAERSLSLSSYSISTAR*FGFEPESTEKVTSTPGHSHCTRVYWICSRPAARS 115
Query: 653 WLSCPGFAKAPNAVPLMSKWTCSSGH 730
+ PGFA APNAVPLMSKW S H
Sbjct: 114 *SAIPGFAMAPNAVPLMSKWAPSFRH 37
Score = 83.5 bits (176), Expect(2) = 6e-028
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +1 / -3
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHPGILDLDGAGATQLALLPGL 672
V G + A +LVLDQH Q+VRV AR++RE ++++RP ALH +LDL A +T+L L
Sbjct: 274 VDGRKIAFTVLVLDQHSQIVRVRARVNRESYINSRPFALHTSVLDLQQASSTELIGHSRL 95
Query: 673 RQGTERCPAHVEVDLLIRTRAI 738
GT+ P HV+V LI AI
Sbjct: 94 CHGTKCSPTHVKVGSLI*AHAI 29
Score = 62.0 bits (129), Expect(2) = 6e-028
Identities = 29/70 (41%), Positives = 39/70 (55%)
Frame = +1 / -3
Query: 211 MHQTIQCPGSLVXXXXXXXXXXXRHSHAARPVRDAGVPPRRYGVAGDERPARAEGEADVE 390
+HQT +C SL+ H H+ PVR PP RYG+AG E PA AE +A+VE
Sbjct: 547 IHQTAKCSSSLMDPAATTPGPGPSHRHSTCPVRHTRSPPCRYGIAGYEYPA*AECQAEVE 368
Query: 391 GALEDGAGVD 420
A++ A V+
Sbjct: 367 RAVKGRARVE 338
>gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195928, DNA
sequence
Length = 715
Score = 198 bits (426), Expect(3) = 3e-077
Identities = 80/89 (89%), Positives = 81/89 (91%)
Frame = -1 / -2
Query: 492 MMQTQGGTTGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAG 313
M Q QGGTTGQWVPMQQSWGAVWKINSG+VLQGPFNIRLTFSSGR LVA NAIPAGWNAG
Sbjct: 594 MQQGQGGTTGQWVPMQQSWGAVWKINSGAVLQGPFNIRLTFSSGRVLVAGNAIPAGWNAG 415
Query: 312 VAYRSGGVAVTRARPRSGACRGYEAAGTL 226
VAYRSGGVAV RARPRSG CR YEAAG L
Sbjct: 414 VAYRSGGVAVARARPRSGVCRRYEAAGAL 328
Score = 196 bits (422), Expect(4) = 6e-075
Identities = 80/93 (86%), Positives = 80/93 (86%)
Frame = +2 / +2
Query: 215 TKPSSVPAAS*PRQAPLLGLALVTATPPDRYATPAFHPAGMALLATSALPELKVRRMLKG 394
TK S PAAS* RQ PL GLAL TATPPDRYATPAFHPAGMAL ATS LPELKVRRMLKG
Sbjct: 317 TKRCSAPAAS*RRQTPLRGLALATATPPDRYATPAFHPAGMALPATSTLPELKVRRMLKG 496
Query: 395 PWRTEPELIFHTAPHDCCIGTHCPVVPPCVCIM 493
PWRT PELIFHTAPHDCCIGTHCPVVPP C M
Sbjct: 497 PWRTAPELIFHTAPHDCCIGTHCPVVPP*PCCM 595
Score = 124 bits (265), Expect(3) = 2e-042
Identities = 52/69 (75%), Positives = 54/69 (78%)
Frame = +1 / +1
Query: 214 HQTIQCPGSLVXXXXXXXXXXXRHSHAARPVRDAGVPPRRYGVAGDERPARAEGEADVEG 393
H+ +QC GSLV RHSHAA PVRDAGVPPRRYGVAGDE PARAEGEADVEG
Sbjct: 316 HEKVQCSGSLVAPADTAPGPGPRHSHAA*PVRDAGVPPRRYGVAGDEHPARAEGEADVEG 495
Query: 394 ALEDGAGVD 420
ALEDGAGVD
Sbjct: 496 ALEDGAGVD 522
Score = 95.0 bits (201), Expect(3) = 3e-077
Identities = 40/48 (83%), Positives = 41/48 (85%)
Frame = -1 / -2
Query: 609 QCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSALDSVDMMQTQGGTT 466
QCEWPGVDVTFSVE GSNPNYLAVLIEYEDSDS L SVD+MQ G T
Sbjct: 714 QCEWPGVDVTFSVESGSNPNYLAVLIEYEDSDSDLYSVDIMQQGQGGT 571
Score = 94.1 bits (199), Expect(3) = 9e-037
Identities = 37/39 (94%), Positives = 37/39 (94%)
Frame = -2 / -3
Query: 608 SASGLAWT*PSRWSRAPTRTTWPC*SSTRIATAPSTPWT 492
SASGLAWT*PSRWSRAPTRTTWPC*SSTR ATA STPWT
Sbjct: 713 SASGLAWT*PSRWSRAPTRTTWPC*SSTRTATATSTPWT 597
Score = 89.5 bits (189), Expect(4) = 6e-075
Identities = 37/39 (94%), Positives = 38/39 (97%)
Frame = +1 / +1
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLAL 609
VHGVE AVA+LVLDQHGQVVRVGARLHREGHVHARPLAL
Sbjct: 598 VHGVEVAVAVLVLDQHGQVVRVGARLHREGHVHARPLAL 714
Score = 70.7 bits (148), Expect(3) = 9e-037
Identities = 33/51 (64%), Positives = 33/51 (64%)
Frame = -2 / -3
Query: 365 LAGRSSPATPYLRGGTPASRTGLAAWL*RXXXXXXXXXXATRLPGHWMVWC 213
LAG SSPATPYLRGGTPASRTG AAWL R ATRLP H C
Sbjct: 467 LAGCSSPATPYLRGGTPASRTGQAAWLWRGPGPGAVSAGATRLPEHCTFSC 315
Score = 66.6 bits (139), Expect(3) = 5e-023
Identities = 28/46 (60%), Positives = 29/46 (63%)
Frame = -3 / -1
Query: 355 ARRQQRHTCGXXXXXXXXXXXRGCDEGQAQERCLPGLRGCRDTGWF 218
ARR+QRHTCG RGC EGQA ERCLP LRGCR T F
Sbjct: 457 ARRRQRHTCGVERRRRVPVRRRGCGEGQAPERCLPALRGCRSTAPF 320
Score = 54.2 bits (112), Expect(3) = 5e-023
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -3 / -1
Query: 610 AVRVAWRGRDLLGGAGLQPELP 545
AVRVAWRGRDLLGG GLQPELP
Sbjct: 715 AVRVAWRGRDLLGGVGLQPELP 650
Score = 51.9 bits (107), Expect(3) = 2e-042
Identities = 23/48 (47%), Positives = 24/48 (50%)
Frame = +2 / +2
Query: 467 VVPPCVCIMXXXXXXXXXXXXXXXXXXXFGLEPGSTEKVTSTPGHSHC 610
V P C+M FGLEP STEKVTSTPGHSHC
Sbjct: 572 VPP*PCCMMSTE*RSLSLSSYSISTAR*FGLEPDSTEKVTSTPGHSHC 715
Score = 36.3 bits (73), Expect(3) = 3e-077
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = -1 / -1
Query: 165 AEMRCNFAGSGSVRVWATWTE* 100
AEMRCNF G SV++ TW E*
Sbjct: 280 AEMRCNFGGGVSVQIRTTWIE* 215
Score = 35.9 bits (72), Expect(3) = 2e-042
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2 / +3
Query: 86 KNTQSYSVHVAQTRTLPEPAKLHRISAHSVXXXXXXXXXR 205
++ ++YS+ V TL P KLHRISAH + R
Sbjct: 201 QHQENYSIQVVLICTLTPPPKLHRISAHRLTASTIPLTTR 320
Score = 35.4 bits (71), Expect(4) = 6e-075
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +1 / +2
Query: 97 ELLSPCSPNSHAPRTSKIASHLGS 168
+LL+P SPN HA T+KI SHL S
Sbjct: 212 KLLNPGSPNLHAHTTTKITSHLRS 283
Score = 31.3 bits (62), Expect(3) = 9e-037
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3 / -3
Query: 175 DAVSRDAMQFCWFWERASLGYMD*V 101
+ VS DAM F W+ ERA+ Y+D*V
Sbjct: 290 EPVSGDAM*FWWWCERAN*DYLD*V 216
Score = 28.6 bits (56), Expect(3) = 5e-023
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2 / -2
Query: 155 DAILLVLGACEFGLHGLSS 99
D IL+V+ AC+ GL GLSS
Sbjct: 270 DVILVVV*ACKLGLPGLSS 214
Score = 22.1 bits (42), Expect(4) = 6e-075
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 156 ASRLTASITPVTTTR 200
A RLTAS P+TT +
Sbjct: 279 AHRLTASTIPLTTRK 323
>gb|CW155769.1|CW155769 104_558_11146316_116_36370_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146316, DNA
sequence
Length = 719
Score = 158 bits (339), Expect(3) = 8e-075
Identities = 61/81 (75%), Positives = 71/81 (87%)
Frame = -1 / +2
Query: 471 TTGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRSGG 292
+ GQWVPMQ SWGA+W+++SGS L GPF++RLTFSSGR L+ASNAIPAGW GVAYR+GG
Sbjct: 395 SAGQWVPMQHSWGAIWRLDSGSALHGPFHLRLTFSSGRVLIASNAIPAGWTPGVAYRAGG 574
Query: 291 VAVTRARPRSGACRGYEAAGT 229
VAVTRARPRSG R +EAAGT
Sbjct: 575 VAVTRARPRSGGGRIHEAAGT 637
Score = 139 bits (299), Expect(3) = 3e-055
Identities = 60/84 (71%), Positives = 62/84 (73%)
Frame = +2 / -3
Query: 215 TKPSSVPAAS*PRQAPLLGLALVTATPPDRYATPAFHPAGMALLATSALPELKVRRMLKG 394
TK +VPAAS R PLLGLALVTATPP RYATP HPAGMALLA S LPEL VRR G
Sbjct: 651 TKLLNVPAASWIRPPPLLGLALVTATPPARYATPGVHPAGMALLAMSTLPELNVRRRWNG 472
Query: 395 PWRTEPELIFHTAPHDCCIGTHCP 466
P R EPE APH+CCIGTHCP
Sbjct: 471 P*RAEPESSLQIAPHECCIGTHCP 400
Score = 94.5 bits (200), Expect(3) = 8e-075
Identities = 37/47 (78%), Positives = 41/47 (87%)
Frame = -1 / +2
Query: 612 VQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSALDSVDMMQTQGG 472
VQCEWPGVDVTFSV+ GSNPNYLAVLIEYEDS+S L +VD+MQ G
Sbjct: 263 VQCEWPGVDVTFSVDSGSNPNYLAVLIEYEDSESDLSAVDIMQNSAG 403
Score = 71.6 bits (150), Expect(3) = 8e-075
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -1 / +3
Query: 738 DCPCPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTR 613
D C +E HFDMSGTAFGA+AKPG QLR AG +QIQYTR
Sbjct: 3 DGMCLNEGAHFDMSGTAFGAMAKPGMADQLRAAGLLQIQYTR 128
Score = 62.0 bits (129), Expect(3) = 8e-024
Identities = 29/70 (41%), Positives = 39/70 (55%)
Frame = +1 / -2
Query: 211 MHQTIQCPGSLVXXXXXXXXXXXRHSHAARPVRDAGVPPRRYGVAGDERPARAEGEADVE 390
+HQT +C SL+ H H+ PVR PP RYG+AG E PA AE +A+VE
Sbjct: 655 IHQTAKCSSSLMDPAATTPGPGPSHRHSTCPVRHTRSPPCRYGIAGYEYPA*AECQAEVE 476
Query: 391 GALEDGAGVD 420
A++ A V+
Sbjct: 475 RAVKGRARVE 446
Score = 61.6 bits (128), Expect(3) = 3e-055
Identities = 26/39 (66%), Positives = 27/39 (69%)
Frame = +2 / -2
Query: 614 RVYWIWMAPAPRSWLSCPGFAKAPNAVPLMSKWTCSSGH 730
RVYWI PA RS + PGFA APNAVPLMSKW S H
Sbjct: 127 RVYWICSRPAARS*SAIPGFAMAPNAVPLMSKWAPSFRH 11
Score = 55.6 bits (115), Expect(3) = 8e-024
Identities = 22/40 (55%), Positives = 31/40 (77%)
Frame = +1 / -2
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALH 612
V G + A +LVLDQH Q+VRV AR++RE ++++RP ALH
Sbjct: 382 VDGRKIAFTVLVLDQHSQIVRVRARVNRESYINSRPFALH 263
Score = 54.2 bits (112), Expect(3) = 3e-055
Identities = 24/54 (44%), Positives = 25/54 (46%)
Frame = +2 / -3
Query: 473 PPCVCIMXXXXXXXXXXXXXXXXXXXFGLEPGSTEKVTSTPGHSHCTRVYWIWM 634
P C+M FG EP STEKVTSTPGHSHCT I M
Sbjct: 402 PAEFCMMSTAERSLSLSSYSISTAR*FGFEPESTEKVTSTPGHSHCTLYIHICM 241
Score = 34.5 bits (69), Expect(3) = 8e-024
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = +1 / -1
Query: 613 PGILDLDGAGATQLALLPGLRQGTERCPAHVEVDLLIRTRAI 738
P +LDL A +T+L L GT+ P HV+V LI AI
Sbjct: 128 PSVLDLQQASSTELIGHSRLCHGTKCSPTHVKVGSLI*AHAI 3
>gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f151h04, DNA
sequence
Length = 598
Score = 198 bits (426), Expect(2) = 3e-073
Identities = 80/89 (89%), Positives = 81/89 (91%)
Frame = -1 / -2
Query: 492 MMQTQGGTTGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAG 313
M Q QGGTTGQWVPMQQSWGAVWKINSG+VLQGPFNIRLTFSSGR LVA NAIPAGWNAG
Sbjct: 357 MQQGQGGTTGQWVPMQQSWGAVWKINSGAVLQGPFNIRLTFSSGRVLVAGNAIPAGWNAG 178
Query: 312 VAYRSGGVAVTRARPRSGACRGYEAAGTL 226
VAYRSGGVAV RARPRSG CR YEAAG L
Sbjct: 177 VAYRSGGVAVARARPRSGVCRRYEAAGAL 91
Score = 196 bits (422), Expect(3) = 3e-073
Identities = 80/93 (86%), Positives = 80/93 (86%)
Frame = +2 / +2
Query: 215 TKPSSVPAAS*PRQAPLLGLALVTATPPDRYATPAFHPAGMALLATSALPELKVRRMLKG 394
TK S PAAS* RQ PL GLAL TATPPDRYATPAFHPAGMAL ATS LPELKVRRMLKG
Sbjct: 80 TKRCSAPAAS*RRQTPLRGLALATATPPDRYATPAFHPAGMALPATSTLPELKVRRMLKG 259
Query: 395 PWRTEPELIFHTAPHDCCIGTHCPVVPPCVCIM 493
PWRT PELIFHTAPHDCCIGTHCPVVPP C M
Sbjct: 260 PWRTAPELIFHTAPHDCCIGTHCPVVPP*PCCM 358
Score = 124 bits (265), Expect(3) = 5e-039
Identities = 52/69 (75%), Positives = 54/69 (78%)
Frame = +1 / +1
Query: 214 HQTIQCPGSLVXXXXXXXXXXXRHSHAARPVRDAGVPPRRYGVAGDERPARAEGEADVEG 393
H+ +QC GSLV RHSHAA PVRDAGVPPRRYGVAGDE PARAEGEADVEG
Sbjct: 79 HEKVQCSGSLVAPADTAPGPGPRHSHAA*PVRDAGVPPRRYGVAGDEHPARAEGEADVEG 258
Query: 394 ALEDGAGVD 420
ALEDGAGVD
Sbjct: 259 ALEDGAGVD 285
Score = 99.1 bits (210), Expect(2) = 3e-073
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -1 / -2
Query: 615 RVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSALDSVDMMQTQGGTT 466
RVQCEWPGVDVTFSVE GSNPNYLAVLIEYEDSDS L SVD+MQ G T
Sbjct: 483 RVQCEWPGVDVTFSVESGSNPNYLAVLIEYEDSDSDLYSVDIMQQGQGGT 334
Score = 97.7 bits (207), Expect(2) = 3e-034
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = -2 / -3
Query: 614 GCSASGLAWT*PSRWSRAPTRTTWPC*SSTRIATAPSTPWT 492
GCSASGLAWT*PSRWS APTRTTWPC*SSTR ATA STPWT
Sbjct: 482 GCSASGLAWT*PSRWSPAPTRTTWPC*SSTRTATATSTPWT 360
Score = 93.2 bits (197), Expect(3) = 3e-073
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1 / +1
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHP 615
VHGVE AVA+LVLDQHGQVVRVGA LHREGHVHARPLALHP
Sbjct: 361 VHGVEVAVAVLVLDQHGQVVRVGAGLHREGHVHARPLALHP 483
Score = 70.7 bits (148), Expect(2) = 3e-034
Identities = 33/51 (64%), Positives = 33/51 (64%)
Frame = -2 / -3
Query: 365 LAGRSSPATPYLRGGTPASRTGLAAWL*RXXXXXXXXXXATRLPGHWMVWC 213
LAG SSPATPYLRGGTPASRTG AAWL R ATRLP H C
Sbjct: 230 LAGCSSPATPYLRGGTPASRTGQAAWLWRGPGPGAVSAGATRLPEHCTFSC 78
Score = 54.2 bits (112), Expect(3) = 5e-039
Identities = 24/49 (48%), Positives = 25/49 (51%)
Frame = +2 / +2
Query: 467 VVPPCVCIMXXXXXXXXXXXXXXXXXXXFGLEPGSTEKVTSTPGHSHCT 613
V P C+M FGLEP STEKVTSTPGHSHCT
Sbjct: 335 VPP*PCCMMSTE*RSLSLSSYSISTAR*FGLEPDSTEKVTSTPGHSHCT 481
Score = 26.7 bits (52), Expect(3) = 3e-073
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +2 / +3
Query: 128 TLPEPAKLHRISAHSVXXXXXXXXXR 205
++P KLHRISAH + R
Sbjct: 6 SIPSTTKLHRISAHRLTASTIPLTTR 83
Score = 22.1 bits (42), Expect(3) = 5e-039
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3 / +3
Query: 156 ASRLTASITPVTTTR 200
A RLTAS P+TT +
Sbjct: 42 AHRLTASTIPLTTRK 86
>gb|CW430464.1|CW430464 fsbb001f144d01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f144d01, DNA
sequence
Length = 639
Score = 110 bits (235), Expect(3) = 2e-049
Identities = 41/43 (95%), Positives = 41/43 (95%)
Frame = +2 / +3
Query: 614 RVYWIWMAPAPRSWLSCPGFAKAPNAVPLMSKWTCSSGHGQSG 742
RVYWIWMAPAPRSWLSCPG AKAPNAVPLMSKWT SSGHGQSG
Sbjct: 291 RVYWIWMAPAPRSWLSCPGLAKAPNAVPLMSKWTWSSGHGQSG 419
Score = 110 bits (234), Expect(3) = 2e-050
Identities = 42/44 (95%), Positives = 43/44 (97%)
Frame = -1 / -3
Query: 744 CPDCPCPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTR 613
CPDCPCPD+QVH DMSGTAFGALAKPGQESQLRGAGAIQIQYTR
Sbjct: 421 CPDCPCPDDQVHLDMSGTAFGALAKPGQESQLRGAGAIQIQYTR 290
Score = 99.1 bits (210), Expect(2) = 1e-037
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -1 / -3
Query: 615 RVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSALDSVDMMQTQGGTT 466
RVQCEWPGVDVTFSVE GSNPNYLAVLIEYEDSDS L SVD+MQ G T
Sbjct: 169 RVQCEWPGVDVTFSVESGSNPNYLAVLIEYEDSDSDLYSVDIMQQGQGGT 20
Score = 97.7 bits (207), Expect(3) = 2e-050
Identities = 38/41 (92%), Positives = 38/41 (92%)
Frame = -2 / -1
Query: 614 GCSASGLAWT*PSRWSRAPTRTTWPC*SSTRIATAPSTPWT 492
GCSASGLAWT*PSRWS APTRTTWPC*SSTR ATA STPWT
Sbjct: 168 GCSASGLAWT*PSRWSPAPTRTTWPC*SSTRTATATSTPWT 46
Score = 93.2 bits (197), Expect(3) = 2e-049
Identities = 38/41 (92%), Positives = 39/41 (95%)
Frame = +1 / +2
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHP 615
VHGVE AVA+LVLDQHGQVVRVGA LHREGHVHARPLALHP
Sbjct: 47 VHGVEVAVAVLVLDQHGQVVRVGAGLHREGHVHARPLALHP 169
Score = 90.4 bits (191), Expect(2) = 4e-027
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3 / +1
Query: 615 GYTGFGWRRRHAAGSPARASPRHRTLSRSCRSGPAHQDTGNRG 743
GYTGFGW +RHAAGSPARA PR +TLSRSC SGP H DTGN+G
Sbjct: 292 GYTGFGWHQRHAAGSPARAWPRRQTLSRSCPSGPGHLDTGNQG 420
Score = 79.0 bits (166), Expect(2) = 4e-024
Identities = 36/46 (78%), Positives = 37/46 (80%)
Frame = -2 / -1
Query: 743 APIARVLMSRSTST*AGQRSVPWRSPGRRASCVAPAPSKSSIPGCS 606
A IARV M+RST T*AGQR PW SPGRRASCVA PSKSSIPG S
Sbjct: 420 ALIARVQMTRSTWT*AGQRLAPWPSPGRRASCVALVPSKSSIPGMS 283
Score = 79.0 bits (166), Expect(2) = 1e-037
Identities = 34/43 (79%), Positives = 35/43 (81%)
Frame = -3 / -2
Query: 742 PRLPVS**AGPLRHERDSVRCLGEARAGEPAAWRRRHPNPVYP 614
P LPVS * GPL HERDSV LG+ARAGEPAAWR HPNPVYP
Sbjct: 419 P*LPVSR*PGPLGHERDSVWRLGQARAGEPAAWRWCHPNPVYP 291
Score = 54.2 bits (112), Expect(2) = 4e-027
Identities = 24/49 (48%), Positives = 25/49 (51%)
Frame = +2 / +3
Query: 467 VVPPCVCIMXXXXXXXXXXXXXXXXXXXFGLEPGSTEKVTSTPGHSHCT 613
V P C+M FGLEP STEKVTSTPGHSHCT
Sbjct: 21 VPP*PCCMMSTE*RSLSLSSYSISTAR*FGLEPDSTEKVTSTPGHSHCT 167
Score = 53.8 bits (111), Expect(2) = 4e-024
Identities = 21/26 (80%), Positives = 22/26 (84%)
Frame = -3 / -2
Query: 622 VYPGAVRVAWRGRDLLGGAGLQPELP 545
+ GAVRVAWRGRDLLGG LQPELP
Sbjct: 176 IVQGAVRVAWRGRDLLGGVRLQPELP 99
Score = 34.1 bits (68), Expect(3) = 2e-050
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / -3
Query: 492 MMQTQGGTTGQWVP 451
M Q QGGTTGQWVP
Sbjct: 43 MQQGQGGTTGQWVP 2
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / +3
Query: 452 GTHCPVVPPCVCIM 493
GTHCPVVPP C M
Sbjct: 3 GTHCPVVPP*PCCM 44
>gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 1256
Score = 121 bits (259), Expect(3) = 4e-046
Identities = 46/92 (50%), Positives = 63/92 (68%)
Frame = -1 / -3
Query: 744 CPDCPCPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEP 565
CP C E HFDMSGT+ GA+AKPG ++R AG +++QY RV C++ GV++ F V+
Sbjct: 789 CPGGVCLAEAAHFDMSGTSMGAMAKPGMADKIRAAGILKVQYKRVPCKYSGVNIAFRVDQ 610
Query: 564 GSNPNYLAVLIEYEDSDSALDSVDMMQTQGGT 469
GSNP Y VL+E+ED D L +VD+M+ GT
Sbjct: 609 GSNPFYFEVLVEFEDGDGDLSAVDLMEAGCGT 514
Score = 73.5 bits (154), Expect(2) = 4e-022
Identities = 40/84 (47%), Positives = 45/84 (53%)
Frame = +1 / +1
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHPGILDLDGAGATQLALLPGL 672
VHG E AVA+L L QH +V V A +H E VHA LA HP +LDL G L GL
Sbjct: 538 VHGAEVAVAVLELHQHLKVEWVRALVHPERDVHAAVLARHPLVLDL*DTGGANLVGHAGL 717
Query: 673 RQGTERCPAHVEVDLLIRTRAIGA 744
R G AHVEV L + GA
Sbjct: 718 RHGAHGGAAHVEVSRLRKADTAGA 789
Score = 65.2 bits (136), Expect(3) = 4e-046
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -3
Query: 417 NSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
N+G L+ PF++RLT SG+ LVA+N IPAGWN G YRS
Sbjct: 465 NTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRS 346
Score = 52.4 bits (108), Expect(2) = 4e-022
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +2 / +2
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKGPWRTEPEL 418
+RY P F PAGM LLATS LPE +VRR KG P L
Sbjct: 347 ERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVL 466
Score = 38.2 bits (77), Expect(3) = 4e-046
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / -3
Query: 465 GQWVPMQQSWGAVWKINSGS 406
G W PM Q+WGA+W+ NS +
Sbjct: 519 GTWTPMVQNWGALWRYNSNT 460
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 121 bits (259), Expect(2) = 9e-045
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 82 PVSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 261
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGGT 469
AVL+E+ED D + VD+M+ G+
Sbjct: 262 FAVLVEFEDGDGDVVQVDLMEANSGS 339
Score = 80.3 bits (169), Expect(2) = 9e-045
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W YRS
Sbjct: 331 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRS 501
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 121 bits (259), Expect(2) = 9e-045
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 123 PVSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 302
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGGT 469
AVL+E+ED D + VD+M+ G+
Sbjct: 303 FAVLVEFEDGDGDVVQVDLMEANSGS 380
Score = 80.3 bits (169), Expect(2) = 9e-045
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W YRS
Sbjct: 372 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRS 542
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 121 bits (259), Expect(2) = 9e-045
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = -1 / -3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 736 PVSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 557
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGGT 469
AVL+E+ED D + VD+M+ G+
Sbjct: 556 FAVLVEFEDGDGDVVQVDLMEANSGS 479
Score = 80.3 bits (169), Expect(2) = 9e-045
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / -3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W YRS
Sbjct: 487 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRS 317
>gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_G06_A002 5', mRNA sequence
Length = 677
Score = 121 bits (259), Expect(2) = 9e-045
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 253 PVSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 432
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGGT 469
AVL+E+ED D + VD+M+ G+
Sbjct: 433 FAVLVEFEDGDGDVVQVDLMEANSGS 510
Score = 80.3 bits (169), Expect(2) = 9e-045
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W YRS
Sbjct: 502 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRS 672
>gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 605
Score = 118 bits (253), Expect(2) = 3e-044
Identities = 48/85 (56%), Positives = 60/85 (70%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSN Y
Sbjct: 89 PVAKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNSVY 268
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVL+E+ED D + VD+M+ G
Sbjct: 269 LAVLVEFEDGDGDVVQVDLMEANSG 343
Score = 81.3 bits (171), Expect(2) = 3e-044
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++S LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 338 SGYWTPMRESWGSIWRLDSNHRLQAPFSLRITNESGRTLVANQVIPANWVPNTYYRS 508
>gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_15_F01_A002 3', mRNA sequence
Length = 775
Score = 121 bits (258), Expect(2) = 4e-044
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 123 PVSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 302
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 303 FAVLVEFEDGDGDVVQVDIMEANSG 377
Score = 78.5 bits (165), Expect(2) = 4e-044
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 372 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 542
>gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_18_F11_A002 3', mRNA sequence
Length = 739
Score = 121 bits (258), Expect(2) = 4e-044
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 131 PVSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 310
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 311 FAVLVEFEDGDGDVVQVDIMEANSG 385
Score = 78.5 bits (165), Expect(2) = 4e-044
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 380 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 550
>gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_1_E07_A002 3', mRNA sequence
Length = 668
Score = 121 bits (258), Expect(2) = 4e-044
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 16 PVSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 195
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 196 FAVLVEFEDGDGDVVQVDIMEANSG 270
Score = 78.5 bits (165), Expect(2) = 4e-044
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 265 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 435
>gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 110 bits (234), Expect(2) = 8e-044
Identities = 42/76 (55%), Positives = 56/76 (73%)
Frame = -1 / +2
Query: 711 HFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLI 532
HFDMSGTA GA+A+PG +LR G ++I Y RV C++PGV+V F V+ G+NP Y VLI
Sbjct: 5 HFDMSGTAMGAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVDQGANPFYFDVLI 184
Query: 531 EYEDSDSALDSVDMMQ 484
E+ED D L +VD+M+
Sbjct: 185 EFEDDDGDLKAVDLME 232
Score = 88.6 bits (187), Expect(2) = 8e-044
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 459 WVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
W PM +WGA W++N+G L+ PF +RLT SGR LVA+NAIPA W G AYRS
Sbjct: 248 WTPMAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRS 409
Score = 64.3 bits (134), Expect(2) = 1e-021
Identities = 33/73 (45%), Positives = 42/73 (57%)
Frame = +1 / -2
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHPGILDLDGAGATQLALLPGL 672
V G+E AV +L LDQH +V RV A +H E VHA LA HP + D + A + +L G
Sbjct: 223 VDGLEVAVVVLELDQHVEVERVRALVHLERDVHAGVLARHPPVQDPEHAASAELVGHAGP 44
Query: 673 RQGTERCPAHVEV 711
R G AHV+V
Sbjct: 43 RHGAHGGAAHVKV 5
Score = 59.7 bits (124), Expect(2) = 1e-021
Identities = 28/54 (51%), Positives = 31/54 (57%)
Frame = +2 / -3
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKGPWRTEPELIFHTAPHDCCIGTH 460
+R A P FH AGMALLATS LPE +V R G P L H AP C +G H
Sbjct: 408 ER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAMGVH 247
>gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148g13, DNA
sequence
Length = 768
Score = 66.6 bits (139), Expect(4) = 1e-043
Identities = 28/48 (58%), Positives = 33/48 (68%)
Frame = -2 / -3
Query: 632 SKSSIPGCSASGLAWT*PSRWSRAPTRTTWPC*SSTRIATAPSTPWT* 489
S+ S+ GC AS A T PS W+RAPT +TW C S+R ATA S PWT*
Sbjct: 385 SRPSVAGCRASTAA*TSPSGWTRAPTHSTWRCWWSSRTATATSAPWT* 242
Score = 65.2 bits (136), Expect(4) = 1e-043
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / -2
Query: 417 NSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
N+G L+ PF++RLT SG+ LVA+N IPAGWN G YRS
Sbjct: 173 NTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRS 54
Score = 64.3 bits (134), Expect(4) = 1e-043
Identities = 25/44 (56%), Positives = 30/44 (68%)
Frame = -1 / -3
Query: 744 CPDCPCPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTR 613
CP C E HFDMSGT+ GA+AKPG +LR AG ++IQY R
Sbjct: 619 CPGGVCLAEAAHFDMSGTSMGAMAKPGMADRLRAAGILKIQYKR 488
Score = 56.1 bits (116), Expect(3) = 1e-023
Identities = 26/41 (63%), Positives = 28/41 (68%)
Frame = +1 / +3
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHP 615
VHG E AVA+L L QH QV VGA +H EG VHA LA HP
Sbjct: 246 VHGAEVAVAVLELHQHLQVEWVGALVHPEGDVHAAVLARHP 368
Score = 52.4 bits (108), Expect(3) = 1e-023
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +2 / +1
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKGPWRTEPEL 418
+RY P F PAGM LLATS LPE +VRR KG P L
Sbjct: 55 ERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVL 174
Score = 43.2 bits (88), Expect(3) = 1e-023
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = +2 / +3
Query: 617 VYWIWMAPAPRSWLSCPGFAKAPNAVPLMSKWTCSS 724
+YWI PA RS + PG A AP VPLMSK S+
Sbjct: 492 LYWILRMPAARSLSAMPGLAMAPMEVPLMSK*AASA 599
Score = 38.2 bits (77), Expect(4) = 1e-043
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / -2
Query: 465 GQWVPMQQSWGAVWKINSGS 406
G W PM Q+WGA+W+ NS +
Sbjct: 227 GTWTPMVQNWGALWRYNSNT 168
>gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_G11_A002 3', mRNA sequence
Length = 781
Score = 118 bits (253), Expect(2) = 1e-043
Identities = 47/86 (54%), Positives = 60/86 (69%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTA GA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 68 PVSKYHFDLSGTALGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 247
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGGT 469
AVL+E+ED D + VD+M+ G+
Sbjct: 248 FAVLVEFEDGDGDVVQVDLMEANSGS 325
Score = 79.4 bits (167), Expect(2) = 1e-043
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W YRS
Sbjct: 317 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNPYYRS 487
>gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_31_B04_A002 3', mRNA sequence
Length = 681
Score = 121 bits (258), Expect(2) = 1e-043
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 28 PVSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 207
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 208 FAVLVEFEDGDGDVVQVDIMEANSG 282
Score = 77.1 bits (162), Expect(2) = 1e-043
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR +VA+ IPA W YRS
Sbjct: 277 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKVVANRVIPANWAPNNYYRS 447
>gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 3', mRNA sequence
Length = 776
Score = 119 bits (254), Expect(2) = 2e-043
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++ R AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 123 PVSKYHFDLSGTAFGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 302
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 303 FAVLVEFEDGDGDVVQVDIMEANSG 377
Score = 78.5 bits (165), Expect(2) = 2e-043
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 372 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 542
>gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_G04_A002 3', mRNA sequence
Length = 695
Score = 119 bits (254), Expect(2) = 2e-043
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++ R AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 45 PVSKYHFDLSGTAFGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 224
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 225 FAVLVEFEDGDGDVVQVDIMEANSG 299
Score = 78.5 bits (165), Expect(2) = 2e-043
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 294 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 464
>gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 3', mRNA sequence
Length = 680
Score = 119 bits (254), Expect(2) = 2e-043
Identities = 47/85 (55%), Positives = 60/85 (70%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++ R AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 41 PVSKYHFDLSGTAFGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 220
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 221 FAVLVEFEDGDGDVVQVDIMEANSG 295
Score = 78.5 bits (165), Expect(2) = 2e-043
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 290 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 460
>gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 536
Score = 119 bits (254), Expect(2) = 2e-043
Identities = 47/80 (58%), Positives = 59/80 (73%)
Frame = -1 / +1
Query: 711 HFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLI 532
HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y AVL+
Sbjct: 7 HFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLV 186
Query: 531 EYEDSDSALDSVDMMQTQGG 472
E+ED D + VD+M+ G
Sbjct: 187 EFEDGDGDVVQVDIMEANSG 246
Score = 78.5 bits (165), Expect(2) = 2e-043
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 241 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 411
>gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D02_A002 5', mRNA sequence
Length = 816
Score = 121 bits (259), Expect(2) = 2e-043
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 414 PVSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 593
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGGT 469
AVL+E+ED D + VD+M+ G+
Sbjct: 594 FAVLVEFEDGDGDVVQVDLMEANSGS 671
Score = 75.8 bits (159), Expect(2) = 2e-043
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGW 322
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W
Sbjct: 663 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANW 809
>gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188j04, DNA
sequence
Length = 648
Score = 109 bits (232), Expect(2) = 3e-043
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = -1 / -3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P E HFDMSGT GA+A+PG +LR G ++I Y RV C++PGV+V F V G+NP Y
Sbjct: 616 PGEVEHFDMSGTPMGAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVYQGANPFY 437
Query: 546 LAVLIEYEDSDSALDSVDMMQ 484
VLIE+ED D L +VD+M+
Sbjct: 436 FDVLIEFEDDDGDLKAVDLME 374
Score = 87.7 bits (185), Expect(2) = 3e-043
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = -1 / -3
Query: 459 WVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
W PM +WGA W++N+G L+ PF +RLT SGR LVA+NAIPA W G AYRS
Sbjct: 358 WTPMALNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRS 197
>gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_35_B11_A002 5', mRNA sequence
Length = 836
Score = 121 bits (258), Expect(2) = 5e-043
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 440 PVSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 619
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 620 FAVLVEFEDGDGDVVQVDIMEANSG 694
Score = 74.8 bits (157), Expect(2) = 5e-043
Identities = 24/49 (48%), Positives = 37/49 (75%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGW 322
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W
Sbjct: 689 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANW 835
>gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 3', mRNA sequence
Length = 755
Score = 115 bits (246), Expect(2) = 2e-042
Identities = 46/85 (54%), Positives = 58/85 (68%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD SGTA GA+AKPG+ ++ R AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 107 PVSKYHFDFSGTALGAMAKPGRNNEFRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 286
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 287 FAVLVEFEDGDGDVVQVDIMEANSG 361
Score = 78.5 bits (165), Expect(2) = 2e-042
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 356 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 526
>gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f054l06, DNA
sequence
Length = 588
Score = 88.1 bits (186), Expect(3) = 2e-042
Identities = 32/54 (59%), Positives = 38/54 (70%)
Frame = -1 / +2
Query: 459 WVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
W PM +WGA W++N+G L+ PF +RLT SGR LVASNAIPA W G YRS
Sbjct: 344 WTPMAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRS 505
Score = 80.8 bits (170), Expect(3) = 2e-042
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = -1 / +2
Query: 666 GQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSALDSVDMM 487
G ++R G +++QY RV C++PGV+V F V+ G+NP Y VLIE+ED D L +VD+M
Sbjct: 146 GMADKVRAGGVVRVQYRRVPCKYPGVNVAFKVDQGANPFYFNVLIEFEDDDGDLSAVDLM 325
Query: 486 Q 484
+
Sbjct: 326 E 328
Score = 60.6 bits (126), Expect(3) = 8e-025
Identities = 28/54 (51%), Positives = 33/54 (61%)
Frame = +1 / -3
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHPGILDLDGAGATQL 654
V G E AV +L LD+H +V RVGA +H EG VHA LA HP +LD A L
Sbjct: 319 VDGAEVAVVVLELDEHVEVERVGALVHLEGDVHAGVLARHPPVLDPHDAAGADL 158
Score = 54.7 bits (113), Expect(3) = 8e-025
Identities = 26/54 (48%), Positives = 29/54 (53%)
Frame = +2 / -1
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKGPWRTEPELIFHTAPHDCCIGTH 460
+R P H AGMALLATS LPE +V R G P L H AP C +G H
Sbjct: 504 ER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLLRRHVAPQLCAMGVH 343
Score = 43.2 bits (88), Expect(3) = 2e-042
Identities = 16/22 (72%), Positives = 18/22 (81%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQ 661
P E HFDMSGTA GA+AKPG+
Sbjct: 80 PGEVAHFDMSGTAMGAMAKPGR 145
Score = 37.3 bits (75), Expect(3) = 8e-025
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / -1
Query: 665 PGFAKAPNAVPLMSKWTCSSGHGQSG 742
PGFA AP AVPLMSK S G+ G
Sbjct: 141 PGFAMAPMAVPLMSKCATSPGNSPPG 64
>gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 125 bits (267), Expect(3) = 3e-042
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = -1 / +1
Query: 729 CPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPN 550
C E VHFD+SGTAFGA+AKPGQ QLR G + +QYTRV C W GVDV F V+ GSN N
Sbjct: 34 CQSEPVHFDLSGTAFGAMAKPGQADQLRNVGRLPVQYTRVPCNWNGVDVAFRVDAGSNAN 213
Query: 549 YLAVLIEYEDSDSALDSVDM 490
YLA+ IEYE D L +V++
Sbjct: 214 YLAMAIEYEAGDGDLRAVEL 273
Score = 96.8 bits (205), Expect(2) = 8e-025
Identities = 45/81 (55%), Positives = 53/81 (65%)
Frame = +1 / -3
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHPGILDLDGAGATQLALLPGL 672
+HG + V LVLD HGQVV V A +H EGHVHA P+A HP +LD + A ++L L G
Sbjct: 270 LHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPSVLDWEAADVSELVGLAGF 91
Query: 673 RQGTERCPAHVEVDLLIRTRA 735
R GTER PA VEVD L RA
Sbjct: 90 RHGTERRPAEVEVDGLGLARA 28
Score = 51.0 bits (105), Expect(3) = 3e-042
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1 / +1
Query: 426 WKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
++ + S+ P ++RLT SG+ LVAS IPAGW G YRS
Sbjct: 331 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRS 459
Score = 38.2 bits (77), Expect(2) = 8e-025
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKG 394
+R P HPAGM LAT LPE +VRR +G
Sbjct: 458 ER*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 363
Score = 35.4 bits (71), Expect(3) = 3e-042
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1 / +1
Query: 459 WVPMQQSWGAVWKINS 412
W PM++SWGAVW+ S
Sbjct: 292 WAPMERSWGAVWRYQS 339
>gb|CW217957.1|CW217957 104_651_11195928_116_37067_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11195928, DNA
sequence
Length = 665
Score = 104 bits (221), Expect(2) = 4e-042
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -1 / +1
Query: 744 CPDCPCPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTR 613
CPDCPCPD+QVH DMSGTA GALAKPGQESQLR AGAIQIQYTR
Sbjct: 298 CPDCPCPDDQVHLDMSGTAIGALAKPGQESQLRDAGAIQIQYTR 429
Score = 97.7 bits (207), Expect(2) = 9e-037
Identities = 38/43 (88%), Positives = 38/43 (88%)
Frame = +2 / -1
Query: 614 RVYWIWMAPAPRSWLSCPGFAKAPNAVPLMSKWTCSSGHGQSG 742
RVYWIWMAPA RSWLS PG AKAP AVPLMSKWT SSGHGQSG
Sbjct: 428 RVYWIWMAPASRSWLSWPGLAKAPIAVPLMSKWTWSSGHGQSG 300
Score = 89.0 bits (188), Expect(2) = 4e-042
Identities = 35/38 (92%), Positives = 36/38 (94%)
Frame = -2 / +2
Query: 614 GCSASGLAWT*PSRWSRAPTRTTWPC*SSTRIATAPST 501
GC+ASGLAWT*PSRWSRAPTRTTWPC*SSTR ATA ST
Sbjct: 551 GCTASGLAWT*PSRWSRAPTRTTWPC*SSTRTATATST 664
Score = 86.8 bits (183), Expect(2) = 8e-022
Identities = 32/43 (74%), Positives = 36/43 (83%)
Frame = +3 / -2
Query: 615 GYTGFGWRRRHAAGSPARASPRHRTLSRSCRSGPAHQDTGNRG 743
GYTGFGW +RHAAGSP RA PR ++LSRSC SGP H DTGN+G
Sbjct: 427 GYTGFGWHQRHAAGSPGRAWPRRQSLSRSCPSGPGHLDTGNQG 299
Score = 79.4 bits (167), Expect(2) = 2e-030
Identities = 31/37 (83%), Positives = 33/37 (89%)
Frame = -1 / +1
Query: 615 RVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSAL 505
RV CEWPG+D+TFSVE SNPNYLAVLIEYEDSDS L
Sbjct: 550 RVHCEWPGLDLTFSVESSSNPNYLAVLIEYEDSDSDL 660
Score = 79.4 bits (167), Expect(2) = 9e-037
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +1 / -3
Query: 502 VEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHP 615
VE AVA+LVLDQHGQVVRVGARLHREG V ARPLA+HP
Sbjct: 663 VEVAVAVLVLDQHGQVVRVGARLHREGQVQARPLAVHP 550
Score = 74.4 bits (156), Expect(2) = 2e-030
Identities = 34/46 (73%), Positives = 35/46 (76%)
Frame = -2 / +2
Query: 743 APIARVLMSRSTST*AGQRSVPWRSPGRRASCVAPAPSKSSIPGCS 606
A IARV M+RST T*AGQR PW SP RRASCV PSKSSIPG S
Sbjct: 299 ALIARVQMTRSTWT*AGQRLAPWPSPARRASCVTLVPSKSSIPGMS 436
Score = 40.0 bits (81), Expect(2) = 8e-022
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +2 / -1
Query: 551 FGLEPGSTEKVTSTPGHSHCT 613
FGLE STEKV S PGHS CT
Sbjct: 614 FGLELDSTEKVRSRPGHSQCT 552
>gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_E01_A002 5', mRNA sequence
Length = 456
Score = 121 bits (259), Expect(2) = 4e-042
Identities = 48/86 (55%), Positives = 61/86 (70%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 59 PVSKYHFDLSGTAFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 238
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGGT 469
AVL+E+ED D + VD+M+ G+
Sbjct: 239 FAVLVEFEDGDGDVVQVDLMEANSGS 316
Score = 71.6 bits (150), Expect(2) = 4e-042
Identities = 23/49 (46%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGW 322
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ I A W
Sbjct: 308 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIRANW 454
>gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_G08_A002 5', mRNA sequence
Length = 889
Score = 121 bits (258), Expect(2) = 2e-041
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 439 PVSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 618
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 619 FAVLVEFEDGDGDVVQVDIMEANSG 693
Score = 69.3 bits (145), Expect(2) = 2e-041
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++S G++W++++ LQ PF++R+T SGR LVA+ IPA W Y S
Sbjct: 688 SGYWTPMRESXGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYGS 858
>gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_F08_A002 3', mRNA sequence
Length = 730
Score = 104 bits (222), Expect(3) = 7e-041
Identities = 40/78 (51%), Positives = 57/78 (73%)
Frame = -1 / +3
Query: 702 MSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYE 523
MSGT+ GA+AKPG +LR AG +++QY RV C++ GV++ F V+ GSNP YL VL+E+E
Sbjct: 3 MSGTSMGAMAKPGMADKLRAAGILKVQYKRVPCKYSGVNIAFRVDQGSNPLYLEVLVEFE 182
Query: 522 DSDSALDSVDMMQTQGGT 469
D D L +V++M+ GT
Sbjct: 183 DGDGDLSAVNLMEAGCGT 236
Score = 64.3 bits (134), Expect(3) = 7e-041
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -1 / +3
Query: 417 NSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
N+G L+ PF+ RLT SG+ LVA+N IPAGWN G YRS
Sbjct: 285 NTGKALKAPFSFRLTSDSGKVLVANNVIPAGWNPGATYRS 404
Score = 38.2 bits (77), Expect(3) = 7e-041
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / +3
Query: 465 GQWVPMQQSWGAVWKINSGS 406
G W PM Q+WGA+W+ NS +
Sbjct: 231 GTWTPMVQNWGALWRYNSNT 290
>gb|CN127599.1|CN127599 RHOH1_24_A06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_A06_A002 3', mRNA sequence
Length = 834
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 129 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 308
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 309 LAVLIEHENQDGDVVQADIMQNNSG 383
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 378 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 548
>gb|CW487412.1|CW487412 fsbb001f253e05f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f253e05, DNA
sequence
Length = 704
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 182 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 361
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 362 LAVLIEHENQDGDVVQADIMQNNSG 436
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 431 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 601
>gb|CW321645.1|CW321645 104_815_11475665_116_35947_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475665, DNA
sequence
Length = 679
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 144 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 323
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 324 LAVLIEHENQDGDVVQADIMQNNSG 398
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 393 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 563
>gb|BG048045.1|BG048045 OV1_26_H12.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 645
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 25 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 204
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 205 LAVLIEHENQDGDVVQADIMQNNSG 279
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 274 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 444
>gb|CW267419.1|CW267419 104_737_11400724_148_35294_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11400724, DNA
sequence
Length = 637
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / +2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 95 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 274
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 275 LAVLIEHENQDGDVVQADIMQNNSG 349
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 344 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 514
>gb|CW446822.1|CW446822 fsbb001f179k13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f179k13, DNA
sequence
Length = 562
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / -2
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 477 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 298
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 297 LAVLIEHENQDGDVVQADIMQNNSG 223
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / -2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 228 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 58
>gb|CD220954.1|CD220954 CCC1_72_B03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_72_B03_A007 5', mRNA sequence
Length = 504
Score = 107 bits (229), Expect(2) = 1e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 82 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 261
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 262 LAVLIEHENQDGDVVQADIMQNNSG 336
Score = 80.3 bits (169), Expect(2) = 1e-040
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 331 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 501
>gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808375, DNA
sequence
Length = 758
Score = 65.2 bits (136), Expect(4) = 3e-040
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = -1 / +1
Query: 417 NSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
N+G L+ PF++RLT SG+ LVA+N IPAGWN G YRS
Sbjct: 478 NTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRS 597
Score = 63.8 bits (133), Expect(4) = 3e-040
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -1 / +1
Query: 744 CPDCPCPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTR 613
CP C E HFDMSGT+ GA+AKPG +LR AG +++QY R
Sbjct: 76 CPGGVCLAEAAHFDMSGTSMGAMAKPGMADKLRAAGILKVQYKR 207
Score = 55.1 bits (114), Expect(4) = 3e-040
Identities = 25/42 (59%), Positives = 28/42 (66%)
Frame = -2 / +2
Query: 614 GCSASGLAWT*PSRWSRAPTRTTWPC*SSTRIATAPSTPWT* 489
GC AS A T PS W+RAPT +T C S+R ATA S PWT*
Sbjct: 284 GCRASTAA*TSPSGWTRAPTHSTSRCWWSSRTATATSAPWT* 409
Score = 54.7 bits (113), Expect(3) = 1e-024
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +1 / -3
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHP 615
VHG E AVA+L L QH +V VGA +H EG VHA LA HP
Sbjct: 405 VHGAEVAVAVLELHQHLEVEWVGALVHPEGDVHAAVLARHP 283
Score = 52.4 bits (108), Expect(3) = 1e-024
Identities = 23/40 (57%), Positives = 25/40 (62%)
Frame = +2 / -1
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKGPWRTEPEL 418
+RY P F PAGM LLATS LPE +VRR KG P L
Sbjct: 596 ERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVL 477
Score = 45.1 bits (92), Expect(3) = 1e-024
Identities = 19/36 (52%), Positives = 23/36 (63%)
Frame = +2 / -1
Query: 617 VYWIWMAPAPRSWLSCPGFAKAPNAVPLMSKWTCSS 724
+YW + PA RS + PGFA AP VPLMSK S+
Sbjct: 203 LYWTFRIPAARSLSAMPGFAMAPMEVPLMSK*AASA 96
Score = 38.2 bits (77), Expect(4) = 3e-040
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1 / +1
Query: 465 GQWVPMQQSWGAVWKINSGS 406
G W PM Q+WGA+W+ NS +
Sbjct: 424 GTWTPMVQNWGALWRYNSNT 483
>gb|CN136034.1|CN136034 OX1_40_H11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_40_H11_A002 3', mRNA sequence
Length = 698
Score = 107 bits (229), Expect(2) = 4e-040
Identities = 44/85 (51%), Positives = 58/85 (68%)
Frame = -1 / +3
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP Y
Sbjct: 33 PVAKYHFDLSGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMY 212
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
LAVLIE+E+ D + D+MQ G
Sbjct: 213 LAVLIEHENQDGDVVQADIMQNNSG 287
Score = 78.5 bits (165), Expect(2) = 4e-040
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ +GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 282 SGYWEPMHESWGSIWRIDPNRPFRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 452
>gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 102 bits (218), Expect(2) = 4e-039
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -1 / +2
Query: 690 AFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDS 511
AFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y AVL+E+ED D
Sbjct: 2 AFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDG 181
Query: 510 ALDSVDMMQTQGGT 469
+ VD+M+ G+
Sbjct: 182 DVVQVDLMEANSGS 223
Score = 80.3 bits (169), Expect(2) = 4e-039
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W YRS
Sbjct: 215 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRS 385
>gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 478
Score = 102 bits (218), Expect(2) = 4e-039
Identities = 41/74 (55%), Positives = 52/74 (70%)
Frame = -1 / +2
Query: 690 AFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDS 511
AFGA+AKPG+ +LR AG I IQ+ RV C +PG VTF VE GSNP Y AVL+E+ED D
Sbjct: 2 AFGAMAKPGRSDELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDGDG 181
Query: 510 ALDSVDMMQTQGGT 469
+ VD+M+ G+
Sbjct: 182 DVVQVDLMEANSGS 223
Score = 80.3 bits (169), Expect(2) = 4e-039
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +2
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W+++SG L PF++R+T SG+ LVA+ IPA W YRS
Sbjct: 215 SGSWTPMRESWGSIWRLDSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRS 385
>gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218800, DNA
sequence
Length = 644
Score = 69.8 bits (146), Expect(4) = 1e-038
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = -1 / -3
Query: 729 CPDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTR 613
C E VHFD+SGTAFGA+AKPGQ QLR G + +QYTR
Sbjct: 597 CQSEPVHFDLSGTAFGAMAKPGQADQLRNVGRLPVQYTR 481
Score = 62.9 bits (131), Expect(3) = 3e-027
Identities = 25/39 (64%), Positives = 26/39 (66%)
Frame = +2 / +2
Query: 614 RVYWIWMAPAPRSWLSCPGFAKAPNAVPLMSKWTCSSGH 730
RVYW P RSW + PGFA APNAVPL SKWT S H
Sbjct: 482 RVYWTGRRPTFRSWSAWPGFAMAPNAVPLRSKWTGSDWH 598
Score = 61.1 bits (127), Expect(4) = 1e-038
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -1 / -2
Query: 621 YTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSALDSVDM 490
+ RV C W GVDV F V+ GSN NYLA+ IEYE D L +V++
Sbjct: 373 HCRVPCNWNGVDVAFRVDAGSNANYLAMAIEYEAGDGDLRAVEL 242
Score = 59.7 bits (124), Expect(3) = 3e-027
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1 / +2
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHPGI 621
+HG + V LVLD HGQVV V A +H EGHVHA P+A HP +
Sbjct: 245 LHGAQVPVPGLVLDGHGQVVGVRAGVHPEGHVHAVPVARHPAV 373
Score = 51.0 bits (105), Expect(4) = 1e-038
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = -1 / -2
Query: 426 WKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
++ + S+ P ++RLT SG+ LVAS IPAGW G YRS
Sbjct: 184 YQSSGSSLQAAPLSVRLTSGSGKTLVASGVIPAGWQPGNTYRS 56
Score = 38.2 bits (77), Expect(3) = 3e-027
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +2 / +3
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKG 394
+R P HPAGM LAT LPE +VRR +G
Sbjct: 57 ER*VLPGCHPAGMTPLATRVLPEPEVRRTDRG 152
Score = 35.4 bits (71), Expect(4) = 1e-038
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = -1 / -2
Query: 459 WVPMQQSWGAVWKINS 412
W PM++SWGAVW+ S
Sbjct: 223 WAPMERSWGAVWRYQS 176
>gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 547
Score = 99.1 bits (210), Expect(2) = 1e-038
Identities = 35/54 (64%), Positives = 43/54 (79%)
Frame = -1 / +1
Query: 459 WVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
W PMQ+SWGAVW+ NSG+ LQ PF++RLT SGR +VA+N IPAGW+ G YRS
Sbjct: 178 WAPMQRSWGAVWRYNSGAALQAPFSVRLTSGSGRTVVATNVIPAGWSPGATYRS 339
Score = 83.5 bits (176), Expect(2) = 6e-029
Identities = 33/54 (61%), Positives = 37/54 (68%)
Frame = +2 / -3
Query: 299 DRYATPAFHPAGMALLATSALPELKVRRMLKGPWRTEPELIFHTAPHDCCIGTH 460
+RY P HPAGM L+AT+ LPE +VRR KG R PEL HTAPHD CIG H
Sbjct: 338 ERYVAPGDHPAGMTLVATTVLPEPEVRRTEKGACRAAPELYLHTAPHDRCIGAH 177
Score = 82.2 bits (173), Expect(2) = 1e-038
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = -1 / +1
Query: 639 GAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSALDSVDMMQTQG 475
G ++IQYTRV C W G+D+ F V+ GSN NYL VLIEYE D L SV++MQ G
Sbjct: 7 GLLKIQYTRVPCNWNGMDIAFKVDGGSNANYLPVLIEYESGDGELRSVELMQRGG 171
Score = 65.2 bits (136), Expect(2) = 6e-029
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +1 / -2
Query: 493 VHGVEGAVAILVLDQHGQVVRVGARLHREGHVHARPLALHPGILDLDGAGA 645
+HG + AVA LVLDQH QVVRV +H E VH P+A HP +LDL+ +GA
Sbjct: 153 LHGPQLAVAGLVLDQHRQVVRVRPAVHLERDVHPVPVARHPSVLDLEESGA 1
>gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_A01_A002 3', mRNA sequence
Length = 620
Score = 101 bits (216), Expect(2) = 2e-038
Identities = 41/75 (54%), Positives = 52/75 (69%)
Frame = -1 / +3
Query: 696 GTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDS 517
G A GA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y AVL+E+ED
Sbjct: 3 GRALGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVYFAVLVEFEDG 182
Query: 516 DSALDSVDMMQTQGG 472
D + VD+M+ G
Sbjct: 183 DGDVVQVDIMEANSG 227
Score = 78.5 bits (165), Expect(2) = 2e-038
Identities = 27/57 (47%), Positives = 40/57 (70%)
Frame = -1 / +3
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM++SWG++W++++ LQ PF++R+T SGR LVA+ IPA W YRS
Sbjct: 222 SGYWTPMRESWGSIWRLDANHRLQAPFSLRITNESGRKLVANRVIPANWAPNNYYRS 392
>gb|CN126677.1|CN126677 RHOH1_18_C01.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_18_C01_A002 5', mRNA sequence
Length = 821
Score = 121 bits (258), Expect(2) = 3e-038
Identities = 48/85 (56%), Positives = 61/85 (71%)
Frame = -1 / +1
Query: 726 PDEQVHFDMSGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNY 547
P + HFD+SGTAFGA+AKPG+ ++LR AG I IQ+ RV C +PG VTF VE GSNP Y
Sbjct: 436 PVSKYHFDLSGTAFGAMAKPGRNNELRHAGIIDIQFKRVPCNYPGQKVTFHVEEGSNPVY 615
Query: 546 LAVLIEYEDSDSALDSVDMMQTQGG 472
AVL+E+ED D + VD+M+ G
Sbjct: 616 FAVLVEFEDGDGDVVQVDIMEANSG 690
Score = 58.8 bits (122), Expect(2) = 3e-038
Identities = 20/45 (44%), Positives = 33/45 (73%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAI 334
+G W PM++S G++W++++ LQ PF++R+T SGR LVA+ I
Sbjct: 685 SGYWTPMRESXGSIWRLDANHRLQAPFSLRITNESGRKLVANRVI 819
>gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_A04_A002 3', mRNA sequence
Length = 622
Score = 90.0 bits (190), Expect(2) = 9e-038
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = -1 / +2
Query: 684 GALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDSDSAL 505
GA+A+PG +LR G ++I Y RV C++PGV+V F V+ G+NP Y VLIE+ED D L
Sbjct: 5 GAMARPGMADKLRAGGVLRILYRRVPCKYPGVNVAFKVDQGANPFYFDVLIEFEDDDGDL 184
Query: 504 DSVDMMQ 484
+VD+M+
Sbjct: 185 KAVDLME 205
Score = 88.6 bits (187), Expect(2) = 9e-038
Identities = 32/54 (59%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 459 WVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
W PM +WGA W++N+G L+ PF +RLT SGR LVA+NAIPA W G AYRS
Sbjct: 221 WTPMAHNWGATWRLNNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGQAYRS 382
>gb|CD223142.1|CD223142 CCC1_26_C06.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_C06_A007 3', mRNA sequence
Length = 647
Score = 96.4 bits (204), Expect(2) = 3e-037
Identities = 40/76 (52%), Positives = 52/76 (68%)
Frame = -1 / +1
Query: 699 SGTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYED 520
SGTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP YLAVLIE+E+
Sbjct: 1 SGTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHEN 180
Query: 519 SDSALDSVDMMQTQGG 472
D + D+MQ G
Sbjct: 181 QDGDVVQADIMQNNSG 228
Score = 80.3 bits (169), Expect(2) = 3e-037
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 223 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 393
>gb|CX607383.1|CX607383 ANR1_8_G05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_8_G05_A002 3', mRNA sequence
Length = 660
Score = 94.5 bits (200), Expect(2) = 1e-036
Identities = 39/75 (52%), Positives = 51/75 (68%)
Frame = -1 / +1
Query: 696 GTAFGALAKPGQESQLRGAGAIQIQYTRVQCEWPGVDVTFSVEPGSNPNYLAVLIEYEDS 517
GTAFGA+A G +LR AG I +Q+ RV C +PG+ +TF V+ GSNP YLAVLIE+E+
Sbjct: 1 GTAFGAMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLIEHENQ 180
Query: 516 DSALDSVDMMQTQGG 472
D + D+MQ G
Sbjct: 181 DGDVVQADIMQNNSG 225
Score = 80.3 bits (169), Expect(2) = 1e-036
Identities = 30/57 (52%), Positives = 41/57 (71%)
Frame = -1 / +1
Query: 468 TGQWVPMQQSWGAVWKINSGSVLQGPFNIRLTFSSGRALVASNAIPAGWNAGVAYRS 298
+G W PM +SWG++W+I+ L+GPF+IR+T SG+ LVA N IPA + A V YRS
Sbjct: 220 SGYWEPMHESWGSIWRIDPNRPLRGPFSIRITNESGKQLVAKNIIPANYVADVDYRS 390
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 943,946,950
Number of Sequences: 832831
Number of extensions: 15127388
Number of successful extensions: 237902
Number of sequences better than 1.0e-020: 247
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 22931040626
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)