TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591131.2.1
(596 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 251 8e-066
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 242 3e-063
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 234 1e-060
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 208 5e-053
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 206 2e-052
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 179 4e-044
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 175 5e-043
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 174 9e-043
gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves... 172 4e-042
gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots S... 172 4e-042
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 162 5e-039
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 160 2e-038
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 158 6e-038
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 158 6e-038
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 118 9e-038
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 157 1e-037
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 102 2e-037
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 155 5e-037
gb|CL182296.1|CL182296 104_393_10897331_148_31921_323 Sorgh... 155 5e-037
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 155 7e-037
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 154 1e-036
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 154 1e-036
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 154 1e-036
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 154 1e-036
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 154 1e-036
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 154 1e-036
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 154 1e-036
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 153 2e-036
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 153 3e-036
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 152 4e-036
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 152 4e-036
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 152 4e-036
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 152 5e-036
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 152 5e-036
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 151 9e-036
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 150 1e-035
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 98 1e-035
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 149 2e-035
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 149 3e-035
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 149 5e-035
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 98 5e-035
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 148 6e-035
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 148 6e-035
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 95 9e-035
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 143 2e-033
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 143 3e-033
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 143 3e-033
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 143 3e-033
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 88 4e-033
gb|CW201862.1|CW201862 104_627_11184792_116_37108_082 Sorgh... 141 7e-033
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 139 3e-032
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 139 3e-032
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 139 4e-032
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 139 4e-032
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 116 5e-032
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 91 1e-031
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 98 2e-031
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 126 2e-031
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 126 2e-031
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 126 2e-031
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 135 5e-031
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 125 6e-031
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 124 8e-031
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 134 9e-031
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 134 1e-030
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 94 2e-030
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 133 2e-030
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 107 7e-030
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 89 1e-029
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 127 1e-028
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 127 2e-028
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 126 3e-028
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 126 4e-028
gb|CW146462.1|CW146462 104_539_11139005_148_34986_025 Sorgh... 125 7e-028
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 125 7e-028
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 124 9e-028
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 123 2e-027
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 73 7e-027
gb|CW151902.1|CW151902 104_552_11144196_148_36321_034 Sorgh... 121 9e-027
gb|BF421232.1|BF421232 FM1_7_B08.g1_A003 Floral-Induced Mer... 119 4e-026
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 78 5e-026
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 78 5e-026
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 78 5e-026
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 118 6e-026
gb|CW135331.1|CW135331 104_519_11117788_148_34827_002 Sorgh... 118 8e-026
gb|CW433351.1|CW433351 fsbb001f148i13f0 Sorghum methylation... 117 1e-025
gb|CW045027.1|CW045027 104_281_10509311_114_30236 Sorghum m... 116 2e-025
gb|CW056377.1|CW056377 104_298_10517649_115_30157 Sorghum m... 116 2e-025
gb|CW069981.1|CW069981 104_320_10526365_1_30089 Sorghum met... 116 2e-025
gb|CW216041.1|CW216041 104_648_11194902_148_37115_019 Sorgh... 116 2e-025
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 116 2e-025
gb|CW412412.1|CW412412 fsbb001f108a17k0 Sorghum methylation... 116 2e-025
gb|BG051375.1|BG051375 FM1_55_G05.g1_A003 Floral-Induced Me... 116 3e-025
gb|CL192765.1|CL192765 104_415_10940470_116_32261_081 Sorgh... 116 4e-025
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 116 4e-025
gb|CF431288.1|CF431288 NIT1_5_F12.b1_A002 Nitrogen-deficien... 115 5e-025
gb|CW448127.1|CW448127 fsbb001f181j14f0 Sorghum methylation... 114 1e-024
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 73 1e-024
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 113 2e-024
gb|BG050409.1|BG050409 FM1_53_G06.g1_A003 Floral-Induced Me... 113 2e-024
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 113 3e-024
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 95 3e-024
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 91 4e-024
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 111 7e-024
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 73 1e-023
gb|CW455692.1|CW455692 fsbb001f200l01f0 Sorghum methylation... 108 6e-023
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 106 2e-022
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 105 4e-022
gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves... 103 3e-021
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 102 5e-021
>gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194751, DNA
sequence
Length = 643
Score = 251 bits (542), Expect = 8e-066
Identities = 102/106 (96%), Positives = 103/106 (97%)
Frame = -1 / -2
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RVSCDRAGGMRFTI+GSAHFLQVLITNVAADGEV AVKVKGSRTGWIPMGRNWGQNWQCD
Sbjct: 513 RVSCDRAGGMRFTITGSAHFLQVLITNVAADGEVTAVKVKGSRTGWIPMGRNWGQNWQCD 334
Query: 311 ADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQFAE*RS 174
ADLR QPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQFAE* S
Sbjct: 333 ADLRGQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQFAE*TS 196
Score = 140 bits (301), Expect = 1e-032
Identities = 64/107 (59%), Positives = 70/107 (65%)
Frame = -3 / -1
Query: 492 EGELRQGGRHAVHHLR*RPLPAGAHHQXXXXXXXXXXXXXGLEDGVDPDGAELGPELXXX 313
+GELRQGGRHAVHH R LPAGA HQ +EDGVDPDG ELGPEL
Sbjct: 514 QGELRQGGRHAVHHHRQCSLPAGADHQRGGGRRGDGREGERVEDGVDPDGTELGPELAVR 335
Query: 312 XXXXXXXXXXRGHRREGQDGHRLQRGAGGLDVRADVRGQAVRRVEID 172
RGHRREGQDGHRLQ A GLDVRADV G+AVRRV+++
Sbjct: 334 RRPPRPATVVRGHRREGQDGHRLQCRASGLDVRADV*GKAVRRVDVE 194
Score = 128 bits (275), Expect(3) = 6e-047
Identities = 52/73 (71%), Positives = 55/73 (75%)
Frame = +1 / +2
Query: 280 SNDSGWARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVN 459
SNDSGW RRSASHCQFWPQFRPIGIHPVL+ LV+STCRK ALP MVN
Sbjct: 302 SNDSGWPRRSASHCQFWPQFRPIGIHPVLDPFTFTAVTSPSAATLVISTCRK*ALPVMVN 481
Query: 460 RMPPALSQLTLRN 498
RMPPALSQLTL +
Sbjct: 482 RMPPALSQLTLHH 520
Score = 54.2 bits (112), Expect(3) = 6e-047
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3 / +1
Query: 219 HPVRRRHAVGGDRPAPPAGDLERQ 290
HPVR R VGGDRPAPPAGDLERQ
Sbjct: 241 HPVRWRDTVGGDRPAPPAGDLERQ 312
Score = 44.1 bits (90), Expect(3) = 6e-047
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / +2
Query: 175 DLYSANCLPSNVCANIQS 228
D+YSANC PSNVCANIQS
Sbjct: 197 DVYSANCFPSNVCANIQS 250
>gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194751, DNA
sequence
Length = 659
Score = 242 bits (523), Expect = 3e-063
Identities = 97/100 (97%), Positives = 98/100 (98%)
Frame = -1 / +2
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RVSCDRAGGMRFTI+GSAHFLQVLITNVAADGEV AVKVKGSRTGWIPMGRNWGQNWQCD
Sbjct: 359 RVSCDRAGGMRFTITGSAHFLQVLITNVAADGEVTAVKVKGSRTGWIPMGRNWGQNWQCD 538
Query: 311 ADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQ 192
ADLR QPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQ
Sbjct: 539 ADLRGQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQ 658
Score = 129 bits (276), Expect = 4e-029
Identities = 60/100 (60%), Positives = 63/100 (63%)
Frame = -3 / +1
Query: 492 EGELRQGGRHAVHHLR*RPLPAGAHHQXXXXXXXXXXXXXGLEDGVDPDGAELGPELXXX 313
+GELRQGGRHAVHH R LPAGA HQ +EDGVDPDG ELGPEL
Sbjct: 358 QGELRQGGRHAVHHHRQCSLPAGADHQRGGGRRGDGREGERVEDGVDPDGTELGPELAVR 537
Query: 312 XXXXXXXXXXRGHRREGQDGHRLQRGAGGLDVRADVRGQA 193
RGHRREGQDGHRLQ A GLDVRADV G+A
Sbjct: 538 RRPPRPATVVRGHRREGQDGHRLQCRASGLDVRADV*GKA 657
Score = 128 bits (275), Expect(3) = 4e-043
Identities = 52/73 (71%), Positives = 55/73 (75%)
Frame = +1 / -3
Query: 280 SNDSGWARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVN 459
SNDSGW RRSASHCQFWPQFRPIGIHPVL+ LV+STCRK ALP MVN
Sbjct: 570 SNDSGWPRRSASHCQFWPQFRPIGIHPVLDPFTFTAVTSPSAATLVISTCRK*ALPVMVN 391
Query: 460 RMPPALSQLTLRN 498
RMPPALSQLTL +
Sbjct: 390 RMPPALSQLTLHH 352
Score = 54.2 bits (112), Expect(3) = 4e-043
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3 / -2
Query: 219 HPVRRRHAVGGDRPAPPAGDLERQ 290
HPVR R VGGDRPAPPAGDLERQ
Sbjct: 631 HPVRWRDTVGGDRPAPPAGDLERQ 560
Score = 31.3 bits (62), Expect(3) = 4e-043
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 193 CLPSNVCANIQS 228
C PSNVCANIQS
Sbjct: 657 CFPSNVCANIQS 622
>gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11116248, DNA
sequence
Length = 643
Score = 234 bits (505), Expect = 1e-060
Identities = 95/99 (95%), Positives = 96/99 (96%)
Frame = -1 / -2
Query: 470 GGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQP 291
GGMRFTI+GSAHFLQVLITNVAADGEV AVKVKGSRTGWIPMGRNWGQNWQCDADLR QP
Sbjct: 642 GGMRFTITGSAHFLQVLITNVAADGEVTAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQP 463
Query: 290 LSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQFAE*RS 174
LSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQFAE* S
Sbjct: 462 LSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQFAE*TS 346
Score = 125 bits (268), Expect = 5e-028
Identities = 58/100 (58%), Positives = 63/100 (63%)
Frame = -3 / -1
Query: 471 GRHAVHHLR*RPLPAGAHHQXXXXXXXXXXXXXGLEDGVDPDGAELGPELXXXXXXXXXX 292
GRHAVHH R LPAGA HQ +EDGVDPDG ELGPEL
Sbjct: 643 GRHAVHHHRQCSLPAGADHQRGGGRRGDGREGERVEDGVDPDGTELGPELAVRRRPPRPA 464
Query: 291 XXXRGHRREGQDGHRLQRGAGGLDVRADVRGQAVRRVEID 172
RGHRREGQDGHRLQ A GLDVRADV G+AVRRV+++
Sbjct: 463 TVVRGHRREGQDGHRLQCRASGLDVRADV*GKAVRRVDVE 344
Score = 114 bits (244), Expect(3) = 9e-043
Identities = 45/64 (70%), Positives = 47/64 (73%)
Frame = +1 / +2
Query: 280 SNDSGWARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVN 459
SNDSGW RRSASHCQFWPQFRPIGIHPVL+ LV+STCRK ALP MVN
Sbjct: 452 SNDSGWPRRSASHCQFWPQFRPIGIHPVLDPFTFTAVTSPSAATLVISTCRK*ALPVMVN 631
Query: 460 RMPP 471
RMPP
Sbjct: 632 RMPP 643
Score = 54.2 bits (112), Expect(3) = 9e-043
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +3 / +1
Query: 219 HPVRRRHAVGGDRPAPPAGDLERQ 290
HPVR R VGGDRPAPPAGDLERQ
Sbjct: 391 HPVRWRDTVGGDRPAPPAGDLERQ 462
Score = 44.1 bits (90), Expect(3) = 9e-043
Identities = 16/18 (88%), Positives = 17/18 (94%)
Frame = +1 / +2
Query: 175 DLYSANCLPSNVCANIQS 228
D+YSANC PSNVCANIQS
Sbjct: 347 DVYSANCFPSNVCANIQS 400
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 208 bits (449), Expect = 5e-053
Identities = 81/135 (60%), Positives = 103/135 (76%)
Frame = -1 / +2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR HL++++ AFL++A+ +AGIVPV +RRV C + GG+RFTI+G ++F VL+T
Sbjct: 95 GGWCNPPRPHLDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVT 274
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
NVA G+V +V +KGS TGW PM RNWGQNWQ ++ L Q LSF+VT GRTVT+ VA
Sbjct: 275 NVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVA 454
Query: 233 PADWMFAQTFEGKQF 189
PA W F QTFEG QF
Sbjct: 455 PAGWQFGQTFEGAQF 499
Score = 103 bits (220), Expect(2) = 1e-024
Identities = 49/100 (49%), Positives = 53/100 (53%)
Frame = +1 / -3
Query: 295 WARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVNRMPPA 474
W RS CQFWPQFR +G HPVLE LV ST K P MVNR+PP
Sbjct: 393 WPSRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPF 214
Query: 475 LSQLTLRNCTGTMPALALATRRNAASDSSRCSRGKLHQPP 594
+ TL TGTMPA A R A S+C RG LHQPP
Sbjct: 213 FTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPP 94
Score = 30.4 bits (60), Expect(2) = 1e-024
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3 / -2
Query: 222 PVRRRHAVGGDRPAPPAGDLE 284
P RRR AV GD A GDLE
Sbjct: 466 PARRRDAVAGDGAAVAGGDLE 404
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 206 bits (445), Expect = 2e-052
Identities = 80/135 (59%), Positives = 102/135 (75%)
Frame = -1 / +1
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR H ++++ AFL++A+ +AGIVPV +RRV C + GG+RFTI+G ++F VL+T
Sbjct: 430 GGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVT 609
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
NVA G+V +V +KGS TGW PM RNWGQNWQ ++ L Q LSF+VT GRTVT+ VA
Sbjct: 610 NVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVA 789
Query: 233 PADWMFAQTFEGKQF 189
PA W F QTFEG QF
Sbjct: 790 PAGWQFGQTFEGAQF 834
Score = 103 bits (220), Expect(2) = 1e-024
Identities = 49/100 (49%), Positives = 53/100 (53%)
Frame = +1 / -2
Query: 295 WARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVNRMPPA 474
W RS CQFWPQFR +G HPVLE LV ST K P MVNR+PP
Sbjct: 728 WPSRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPF 549
Query: 475 LSQLTLRNCTGTMPALALATRRNAASDSSRCSRGKLHQPP 594
+ TL TGTMPA A R A S+C RG LHQPP
Sbjct: 548 FTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPP 429
Score = 30.4 bits (60), Expect(2) = 1e-024
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = +3 / -1
Query: 222 PVRRRHAVGGDRPAPPAGDLE 284
P RRR AV GD A GDLE
Sbjct: 801 PARRRDAVAGDGAAVAGGDLE 739
>gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_H07_A002 3', mRNA sequence
Length = 754
Score = 179 bits (385), Expect = 4e-044
Identities = 68/134 (50%), Positives = 93/134 (69%)
Frame = -1 / +3
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR+H ++S+ ++ ++ GIVPV ++RVSC R GG+RFTI+G+ +F VLI
Sbjct: 243 GGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIF 422
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
NVA G ++AV++KGS TGWI M RNWG NWQ ++DL Q +SF VT GR + Y+VA
Sbjct: 423 NVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVA 602
Query: 233 PADWMFAQTFEGKQ 192
++W QTF Q
Sbjct: 603 GSNWQLGQTFTNGQ 644
>gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194139, DNA
sequence
Length = 640
Score = 175 bits (377), Expect = 5e-043
Identities = 66/129 (51%), Positives = 91/129 (70%)
Frame = -1 / +1
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR+H ++S+ ++ ++ GIVPV ++RVSC R GG+RFTI+G+ +F VLI
Sbjct: 253 GGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIF 432
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
NVA G ++AV++KGS TGWI M RNWG NWQ ++DL Q +SF VT GR + Y+VA
Sbjct: 433 NVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVA 612
Query: 233 PADWMFAQT 207
++W QT
Sbjct: 613 GSNWQLGQT 639
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 174 bits (375), Expect = 9e-043
Identities = 67/116 (57%), Positives = 89/116 (76%)
Frame = -1 / +2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR H ++++ AFL++A+ +AGIVPV +RRV C + GG+RFTI+G ++F VL+T
Sbjct: 434 GGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVT 613
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTA 246
NVA G+V +V +KGS TGW PM RNWGQNWQ ++ L Q LSF+VT GRTVT+
Sbjct: 614 NVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTS 781
Score = 103 bits (220), Expect = 2e-021
Identities = 49/100 (49%), Positives = 53/100 (53%)
Frame = +1 / -2
Query: 295 WARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVNRMPPA 474
W RS CQFWPQFR +G HPVLE LV ST K P MVNR+PP
Sbjct: 732 WPSRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPF 553
Query: 475 LSQLTLRNCTGTMPALALATRRNAASDSSRCSRGKLHQPP 594
+ TL TGTMPA A R A S+C RG LHQPP
Sbjct: 552 FTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPP 433
>gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_39_D07_A002 3', mRNA sequence
Length = 686
Score = 172 bits (370), Expect = 4e-042
Identities = 65/133 (48%), Positives = 93/133 (69%)
Frame = -1 / +2
Query: 575 PREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLITNVAADG 396
P H L +F ++A KAGI+P+Q+RRV C R GG+RF+++G F VLI+NV G
Sbjct: 2 PNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAG 181
Query: 395 EVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMF 216
+V +VK+KG+ GW+ MGRNWGQ W + D+R QPLSFE++ G+T+T+++V P DW +
Sbjct: 182 DVRSVKIKGTELGWLSMGRNWGQVWHINCDMRGQPLSFELSSSDGKTLTSFNVVPKDWEY 361
Query: 215 AQTFEGKQFAE*R 177
+T+ GKQF *R
Sbjct: 362 GKTYTGKQFLL*R 400
>gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_F04_A002 3', mRNA sequence
Length = 718
Score = 172 bits (370), Expect = 4e-042
Identities = 65/133 (48%), Positives = 93/133 (69%)
Frame = -1 / +1
Query: 575 PREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLITNVAADG 396
P H L +F ++A KAGI+P+Q+RRV C R GG+RF+++G F VLI+NV G
Sbjct: 4 PNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLISNVGGAG 183
Query: 395 EVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMF 216
+V +VK+KG+ GW+ MGRNWGQ W + D+R QPLSFE++ G+T+T+++V P DW +
Sbjct: 184 DVRSVKIKGTELGWLSMGRNWGQVWHINCDMRGQPLSFELSSSDGKTLTSFNVVPKDWEY 363
Query: 215 AQTFEGKQFAE*R 177
+T+ GKQF *R
Sbjct: 364 GKTYTGKQFLL*R 402
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 162 bits (348), Expect = 5e-039
Identities = 65/116 (56%), Positives = 81/116 (69%)
Frame = -1 / +2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR H +L+ FL +A+ +AGIVPV +RRV C ++GG+RFTI+G +F VLIT
Sbjct: 275 GGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLIT 454
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTA 246
NVA G++ VK S TGW+ M RNWGQNWQ +A L Q LSF VTG RT T+
Sbjct: 455 NVAGAGDIVRASVKASSTGWLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRTSTS 622
Score = 101 bits (216), Expect = 7e-021
Identities = 47/103 (45%), Positives = 53/103 (51%)
Frame = +1 / -2
Query: 286 DSGWARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVNRM 465
+S W R A CQFWPQFR + HPVL+ V+ST K+ P MVNR
Sbjct: 582 ESAWPTRMALDCQFWPQFRDMVSHPVLDAFTLARTMSPAPATFVISTRLKYRKPLMVNRT 403
Query: 466 PPALSQLTLRNCTGTMPALALATRRNAASDSSRCSRGKLHQPP 594
PP T R TGTMPA A RN S+C RG LHQPP
Sbjct: 402 PPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPP 274
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 160 bits (344), Expect = 2e-038
Identities = 64/113 (56%), Positives = 79/113 (69%)
Frame = -1 / +3
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR H +L+ FL +A+ +AGIVPV +RRV C ++GG+RFTI+G +F VLIT
Sbjct: 483 GGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRKSGGVRFTINGFRYFNLVLIT 662
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRT 255
NVA G++ VK S TGW+ M RNWGQNWQ +A L Q LSF VTG RT
Sbjct: 663 NVAGAGDIVRASVKASSTGWLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRT 821
Score = 101 bits (216), Expect = 7e-021
Identities = 47/103 (45%), Positives = 53/103 (51%)
Frame = +1 / -1
Query: 286 DSGWARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVNRM 465
+S W R A CQFWPQFR + HPVL+ V+ST K+ P MVNR
Sbjct: 790 ESAWPTRMALDCQFWPQFRDMVSHPVLDAFTLARTMSPAPATFVISTRLKYRKPLMVNRT 611
Query: 466 PPALSQLTLRNCTGTMPALALATRRNAASDSSRCSRGKLHQPP 594
PP T R TGTMPA A RN S+C RG LHQPP
Sbjct: 610 PPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPP 482
>gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11137329, DNA
sequence
Length = 593
Score = 158 bits (340), Expect = 6e-038
Identities = 62/101 (61%), Positives = 76/101 (75%)
Frame = -1 / +2
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RV C + GG+RFTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +
Sbjct: 254 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 433
Query: 311 ADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
ADL Q LSF+VT GRTVT+ + APA W F QTFEG QF
Sbjct: 434 ADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQF 556
>gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11474070, DNA
sequence
Length = 692
Score = 158 bits (340), Expect = 6e-038
Identities = 62/101 (61%), Positives = 76/101 (75%)
Frame = -1 / -1
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RV C + GG+RFTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +
Sbjct: 500 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 321
Query: 311 ADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
ADL Q LSF+VT GRTVT+ + APA W F QTFEG QF
Sbjct: 320 ADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQF 198
>gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942159, DNA
sequence
Length = 654
Score = 118 bits (253), Expect(2) = 9e-038
Identities = 46/78 (58%), Positives = 61/78 (78%)
Frame = -1 / -2
Query: 596 AGGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLI 417
+GGWCN PREH +LS AFL++A+ KAGIVPV +RRV+C R GG+R+ I+G+ +F V +
Sbjct: 575 SGGWCNPPREHFDLSMPAFLQIAEEKAGIVPVSYRRVACARQGGIRYAIAGNKYFNMVTV 396
Query: 416 TNVAADGEVAAVKVKGSR 363
TNV G+VAAV VKGS+
Sbjct: 395 TNVGGAGDVAAVSVKGSK 342
Score = 59.3 bits (123), Expect(2) = 9e-038
Identities = 22/58 (37%), Positives = 30/58 (51%)
Frame = -1 / -2
Query: 365 RTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQ 192
R W + RNWG WQ DL + L+F V G R T++ V P DW F T++ +
Sbjct: 341 RVKWTELKRNWGVVWQTGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKFGVTYQASK 168
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 157 bits (338), Expect = 1e-037
Identities = 62/119 (52%), Positives = 82/119 (68%)
Frame = -1 / +2
Query: 596 AGGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLI 417
AGGWCN PR H +LS AFLR+A +A IVPV +RRV+C ++GG+RF ++G +F VLI
Sbjct: 503 AGGWCNPPRHHFDLSMPAFLRIADYRASIVPVTYRRVACRKSGGIRFGVNGFRYFNLVLI 682
Query: 416 TNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYS 240
+NV G+V VK S T W+P+ RNWGQNWQC + L LSF VT RT+T+++
Sbjct: 683 SNVGGAGDVVRAAVKASHTEWLPLARNWGQNWQCSSILVGGALSFRVTTSDRRTLTSWN 859
>gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899280, DNA
sequence
Length = 685
Score = 102 bits (217), Expect(2) = 2e-037
Identities = 40/76 (52%), Positives = 55/76 (72%)
Frame = -1 / +1
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR+H ++++ A+ R+ + GIVPV FRRV C R GG+RFT+SG +F VL+T
Sbjct: 40 GGWCNPPRQHFDMAQPAWERIGVYQGGIVPVLFRRVPCRRRGGVRFTVSGRDYFELVLVT 219
Query: 413 NVAADGEVAAVKVKGS 366
NVA G V A+ V+G+
Sbjct: 220 NVAGAGAVRAMDVRGT 267
Score = 74.8 bits (157), Expect(2) = 2e-037
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = -1 / +1
Query: 368 SRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGK 195
S GW+PM RNWG NWQ A L Q LSF VT G+TV V P W F QT+ +
Sbjct: 268 SSAGWMPMSRNWGANWQSLAYLNGQGLSFRVTADDGQTVVFADVVPPSWTFGQTYASR 441
>gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889911, DNA
sequence
Length = 766
Score = 155 bits (333), Expect = 5e-037
Identities = 61/101 (60%), Positives = 75/101 (74%)
Frame = -1 / -3
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RV C + GG+RFTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +
Sbjct: 398 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 219
Query: 311 ADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
ADL Q LSF+VT GRTVT+ + APA W F QTFE QF
Sbjct: 218 ADLDGQALSFQVTASDGRTVTSNNAAPAGWQFGQTFEDAQF 96
>gb|CL182296.1|CL182296 104_393_10897331_148_31921_323 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10897331, DNA
sequence
Length = 709
Score = 155 bits (333), Expect = 5e-037
Identities = 61/63 (96%), Positives = 62/63 (98%)
Frame = -1 / +1
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RVSCDRAGGMRFTI+GSAHFLQVLITNVAADGEV AVKVKGSRTGWIPMGRNWGQNWQCD
Sbjct: 520 RVSCDRAGGMRFTITGSAHFLQVLITNVAADGEVTAVKVKGSRTGWIPMGRNWGQNWQCD 699
Query: 311 ADL 303
ADL
Sbjct: 700 ADL 708
Score = 110 bits (234), Expect = 2e-023
Identities = 45/65 (69%), Positives = 48/65 (73%)
Frame = +1 / -3
Query: 304 RSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVNRMPPALSQ 483
RSASHCQFWPQFRPIGIHPVL+ LV+STCRK ALP MVNRMPPALSQ
Sbjct: 707 RSASHCQFWPQFRPIGIHPVLDPFTFTAVTSPSAATLVISTCRK*ALPVMVNRMPPALSQ 528
Query: 484 LTLRN 498
LTL +
Sbjct: 527 LTLHH 513
>gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11157513, DNA
sequence
Length = 637
Score = 155 bits (332), Expect = 7e-037
Identities = 63/134 (47%), Positives = 82/134 (61%)
Frame = -1 / -2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ A+ ++ GI+PVQ+++V C R GG+RF+I+G+ +FL V I
Sbjct: 591 GGWCGPGRPHFDMSQPAWEKIGIYSGGIIPVQYQQVKCWRNGGVRFSIAGNYYFLLVNIQ 412
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+A G VAA VKG +TGWI M RNWG NWQ A L Q LSF VT G + +V
Sbjct: 411 NLAGSGSVAAAWVKGDKTGWIQMSRNWGANWQAHAGLVGQGLSFAVTSTGGHYIQFLNVV 232
Query: 233 PADWMFAQTFEGKQ 192
P W F TF Q
Sbjct: 231 PGWWQFGMTFNTNQ 190
>gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 704
Score = 154 bits (331), Expect = 1e-036
Identities = 63/134 (47%), Positives = 82/134 (61%)
Frame = -1 / -1
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ A+ R+ AG++PV +++V C R GG+RF I+GS +FL V I
Sbjct: 509 GGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNIQ 330
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+ G V A VKG RTGWI M RNWG NWQ A L Q LSF VT G+ + ++V
Sbjct: 329 NLGGSGSVGAAWVKGDRTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVV 150
Query: 233 PADWMFAQTFEGKQ 192
P W F QT+ Q
Sbjct: 149 PRWWQFGQTYTTTQ 108
>gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 711
Score = 154 bits (331), Expect = 1e-036
Identities = 63/134 (47%), Positives = 82/134 (61%)
Frame = -1 / -2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ A+ R+ AG++PV +++V C R GG+RF I+GS +FL V I
Sbjct: 509 GGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNIQ 330
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+ G V A VKG RTGWI M RNWG NWQ A L Q LSF VT G+ + ++V
Sbjct: 329 NLGGSGSVGAAWVKGDRTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVV 150
Query: 233 PADWMFAQTFEGKQ 192
P W F QT+ Q
Sbjct: 149 PRWWQFGQTYTTTQ 108
>gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186356, DNA
sequence
Length = 698
Score = 154 bits (331), Expect = 1e-036
Identities = 60/134 (44%), Positives = 84/134 (62%)
Frame = -1 / -3
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ ++ ++ + GI+PV +++V C R+GG+RF I+GS++FL V I
Sbjct: 678 GGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNIQ 499
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+ G V A VKG+ TGWI M RNWG NWQ + L Q LSF VT G+ + +VA
Sbjct: 498 NLGGSGSVGAAWVKGTNTGWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVA 319
Query: 233 PADWMFAQTFEGKQ 192
P W F QT+ Q
Sbjct: 318 PTWWQFGQTYSTNQ 277
>gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189567, DNA
sequence
Length = 675
Score = 154 bits (331), Expect = 1e-036
Identities = 60/134 (44%), Positives = 84/134 (62%)
Frame = -1 / -3
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ ++ ++ + GI+PV +++V C R+GG+RF I+GS++FL V I
Sbjct: 487 GGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNIQ 308
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+ G V A VKG+ TGWI M RNWG NWQ + L Q LSF VT G+ + +VA
Sbjct: 307 NLGGSGSVGAAWVKGTNTGWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVA 128
Query: 233 PADWMFAQTFEGKQ 192
P W F QT+ Q
Sbjct: 127 PTWWQFGQTYSTNQ 86
>gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l07, DNA
sequence
Length = 685
Score = 154 bits (331), Expect = 1e-036
Identities = 60/134 (44%), Positives = 84/134 (62%)
Frame = -1 / -1
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ ++ ++ + GI+PV +++V C R+GG+RF I+GS++FL V I
Sbjct: 439 GGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNIQ 260
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+ G V A VKG+ TGWI M RNWG NWQ + L Q LSF VT G+ + +VA
Sbjct: 259 NLGGSGSVGAAWVKGTNTGWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVA 80
Query: 233 PADWMFAQTFEGKQ 192
P W F QT+ Q
Sbjct: 79 PTWWQFGQTYSTNQ 38
>gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504868, DNA
sequence
Length = 715
Score = 154 bits (330), Expect = 1e-036
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = -1 / -3
Query: 497 FRRVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQ 318
F RV C + GG+RFTI+G ++F VL+TNVA G+V +V +KGS TGW PM RNWGQNWQ
Sbjct: 485 FCRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQ 306
Query: 317 CDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
++ L Q LSF+VT GRTVT+ VAPA W F QTFEG QF
Sbjct: 305 SNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 177
>gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809810, DNA
sequence
Length = 719
Score = 154 bits (330), Expect = 1e-036
Identities = 62/103 (60%), Positives = 75/103 (72%)
Frame = -1 / +3
Query: 497 FRRVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQ 318
F RV C + GG+RFTI+G ++F VL+TNVA G+V +V +KGS TGW PM RNWGQNWQ
Sbjct: 396 FCRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQ 575
Query: 317 CDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
++ L Q LSF+VT GRTVT+ VAPA W F QTFEG QF
Sbjct: 576 SNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 704
>gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 3', mRNA sequence
Length = 483
Score = 153 bits (329), Expect = 2e-036
Identities = 60/123 (48%), Positives = 84/123 (68%)
Frame = -1 / +3
Query: 560 ELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAV 381
++S+ ++ ++ GIVPV ++RVSC R GG+RFTI+G+ +F VLI NVA G ++AV
Sbjct: 3 DMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNVAGPGSISAV 182
Query: 380 KVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFE 201
++KGS TGWI M RNWG NWQ ++DL Q +SF VT GR + Y+VA ++W QTF
Sbjct: 183 QIKGSSTGWITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFT 362
Query: 200 GKQ 192
Q
Sbjct: 363 NGQ 371
>gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f070m01, DNA
sequence
Length = 339
Score = 153 bits (328), Expect = 3e-036
Identities = 60/101 (59%), Positives = 74/101 (73%)
Frame = -1 / +1
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RV C + GG+RFTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +
Sbjct: 13 RVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSN 192
Query: 311 ADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
ADL Q LSF+VT GRTVT+ + APA W TFEG QF
Sbjct: 193 ADLDRQALSFQVTASDGRTVTSNNAAPAGWQLGHTFEGAQF 315
>gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f117h02, DNA
sequence
Length = 725
Score = 152 bits (327), Expect = 4e-036
Identities = 61/134 (45%), Positives = 82/134 (61%)
Frame = -1 / -2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ A+ + AG+VPV +++V C R GG+RF+++GS +FL V I
Sbjct: 571 GGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNIQ 392
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+ G V A VKG +TGWI M RNWG NWQ A L Q LSF VT G+ + ++V
Sbjct: 391 NLGGSGSVGAAWVKGDKTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVV 212
Query: 233 PADWMFAQTFEGKQ 192
P W F QT+ Q
Sbjct: 211 PGWWQFGQTYSTTQ 170
>gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_B02_A002 3', mRNA sequence
Length = 847
Score = 152 bits (327), Expect = 4e-036
Identities = 61/134 (45%), Positives = 82/134 (61%)
Frame = -1 / +2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ A+ + AG+VPV +++V C R GG+RF+++GS +FL V I
Sbjct: 8 GGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNIQ 187
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
N+ G V A VKG +TGWI M RNWG NWQ A L Q LSF VT G+ + ++V
Sbjct: 188 NLGGSGSVGAAWVKGDKTGWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVV 367
Query: 233 PADWMFAQTFEGKQ 192
P W F QT+ Q
Sbjct: 368 PGWWQFGQTYSTTQ 409
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 152 bits (327), Expect = 4e-036
Identities = 57/100 (57%), Positives = 77/100 (77%)
Frame = -1 / +2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR H ++++ AFL++A+ +AGIVPV +RRV C + GG+RFTI+G ++F VL+T
Sbjct: 302 GGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVT 481
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQ 294
NVA G+V +V +KGS TGW PM RNWGQNWQ ++ L Q
Sbjct: 482 NVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQ 601
Score = 103 bits (220), Expect = 2e-021
Identities = 49/100 (49%), Positives = 53/100 (53%)
Frame = +1 / -3
Query: 295 WARRSASHCQFWPQFRPIGIHPVLEXXXXXXXXXXXXXXLVMSTCRKWALPEMVNRMPPA 474
W RS CQFWPQFR +G HPVLE LV ST K P MVNR+PP
Sbjct: 600 WPSRSELLCQFWPQFRDMGCHPVLEPLMETDCTSPAPATLVTSTRLK*EWPLMVNRIPPF 421
Query: 475 LSQLTLRNCTGTMPALALATRRNAASDSSRCSRGKLHQPP 594
+ TL TGTMPA A R A S+C RG LHQPP
Sbjct: 420 FTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPP 301
>gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519350, DNA
sequence
Length = 558
Score = 152 bits (326), Expect = 5e-036
Identities = 59/96 (61%), Positives = 73/96 (76%)
Frame = -1 / +3
Query: 476 RAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRA 297
+ GG+RFTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +ADL
Sbjct: 6 KKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNADLDG 185
Query: 296 QPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
Q LSF+VT GRTVT+ + APA W F QTFEG QF
Sbjct: 186 QALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQF 293
>gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 673
Score = 152 bits (326), Expect = 5e-036
Identities = 59/96 (61%), Positives = 73/96 (76%)
Frame = -1 / +2
Query: 476 RAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRA 297
+ GG+RFTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +ADL
Sbjct: 5 KKGGIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNADLDG 184
Query: 296 QPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
Q LSF+VT GRTVT+ + APA W F QTFEG QF
Sbjct: 185 QALSFQVTASDGRTVTSNNAAPAGWQFGQTFEGAQF 292
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 151 bits (324), Expect = 9e-036
Identities = 55/95 (57%), Positives = 75/95 (78%)
Frame = -1 / +3
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR H ++++ AFL++A+ +AGIVPV +RRV C + GG+RFTI+G ++F VL+T
Sbjct: 417 GGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGHSYFNLVLVT 596
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDA 309
NVA G+V +V +KGS TGW PM RNWGQNWQ ++
Sbjct: 597 NVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNS 701
>gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809810, DNA
sequence
Length = 503
Score = 150 bits (323), Expect = 1e-035
Identities = 61/103 (59%), Positives = 73/103 (70%)
Frame = -1 / -3
Query: 497 FRRVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQ 318
F RV C + GG+RFTI+G ++F VL+TNVA G+ V +KGS TGW PM RNWGQNWQ
Sbjct: 462 FCRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDAHPVSIKGSSTGWQPMSRNWGQNWQ 283
Query: 317 CDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
++ L Q LSF+VT GRTVT+ VAPA W F QTFEG QF
Sbjct: 282 SNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 154
>gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11198028, DNA
sequence
Length = 626
Score = 97.7 bits (207), Expect(2) = 1e-035
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = -1 / -3
Query: 596 AGGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLI 417
A GWCN PR H ++S+ A+ + +AG++PV +RRVSC R+GG+RF ISG +F V I
Sbjct: 618 ANGWCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTI 439
Query: 416 TNVAADGEVAAVKVKGS 366
TNV G VAA + G+
Sbjct: 438 TNVGGAGAVAAAWIMGT 388
Score = 73.0 bits (153), Expect(2) = 1e-035
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = -1 / -3
Query: 362 TGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFE 201
T W+ M RNWG+NWQ A+L + LSF+V G+ V A +VAPA+W F T++
Sbjct: 381 TDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVADNVAPANWQFGSTYQ 220
>gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11110823, DNA
sequence
Length = 553
Score = 149 bits (321), Expect = 2e-035
Identities = 59/115 (51%), Positives = 78/115 (67%)
Frame = -1 / -1
Query: 536 RVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTG 357
++ GIVPV ++RVSC R GG+RFTI+G+ +F VLI NVA G ++AV++KGS TG
Sbjct: 547 KIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIKGSSTG 368
Query: 356 WIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQ 192
WI M RNWG NWQ ++DL Q +SF VT GR + Y+VA ++W QTF Q
Sbjct: 367 WITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFTNGQ 203
>gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 5', mRNA sequence
Length = 744
Score = 149 bits (320), Expect = 3e-035
Identities = 55/103 (53%), Positives = 76/103 (73%)
Frame = -1 / +3
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWCN PR+H ++S+ ++ ++ GIVPV ++RVSC R GG+RFTI+G+ +F VLI
Sbjct: 435 GGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSRTGGVRFTINGNRYFKLVLIF 614
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLS 285
NVA G ++AV++KGS TGWI M RNWG NWQ ++DL Q +S
Sbjct: 615 NVAGPGSISAVQIKGSSTGWITMSRNWGANWQANSDLTRQSIS 743
>gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 3', mRNA sequence
Length = 681
Score = 149 bits (319), Expect = 5e-035
Identities = 58/93 (62%), Positives = 71/93 (76%)
Frame = -1 / +1
Query: 467 GMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPL 288
G+RFTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +ADL Q L
Sbjct: 1 GIRFTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNADLDGQAL 180
Query: 287 SFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
SF+VT GRTVT+ + APA W F QTFEG QF
Sbjct: 181 SFQVTSSDGRTVTSNNAAPAGWQFGQTFEGAQF 279
>gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 97.7 bits (207), Expect(2) = 5e-035
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = -1 / +3
Query: 596 AGGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLI 417
A GWCN PR H ++S+ A+ + +AG++PV +RRVSC R+GG+RF ISG +F V I
Sbjct: 30 ANGWCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTI 209
Query: 416 TNVAADGEVAAVKVKGS 366
TNV G VAA + G+
Sbjct: 210 TNVGGAGAVAAAWIMGT 260
Score = 71.2 bits (149), Expect(2) = 5e-035
Identities = 26/54 (48%), Positives = 35/54 (64%)
Frame = -1 / +3
Query: 362 TGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFE 201
T W+ M RNWG+NWQ A L + LSF+V G+ V A +VAPA+W F T++
Sbjct: 267 TDWLAMSRNWGENWQSGAYLTGKALSFKVQTDDGKVVVADNVAPANWQFGSTYQ 428
>gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149372, DNA
sequence
Length = 679
Score = 148 bits (318), Expect = 6e-035
Identities = 61/130 (46%), Positives = 79/130 (60%)
Frame = -1 / -2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ A+ + +AGI+PV +++V C R GG+RF+I+GS +FL V I
Sbjct: 405 GGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNIQ 226
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
NV G V A VKG +TGWI M RNWG NWQ + L Q LSF VT G+ + V
Sbjct: 225 NVGGSGAVGAAWVKGDKTGWIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVV 46
Query: 233 PADWMFAQTF 204
P W F TF
Sbjct: 45 PGWWQFGMTF 16
>gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11466904, DNA
sequence
Length = 694
Score = 148 bits (318), Expect = 6e-035
Identities = 61/130 (46%), Positives = 79/130 (60%)
Frame = -1 / -2
Query: 593 GGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLIT 414
GGWC R H ++S+ A+ + +AGI+PV +++V C R GG+RF+I+GS +FL V I
Sbjct: 540 GGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNIQ 361
Query: 413 NVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVA 234
NV G V A VKG +TGWI M RNWG NWQ + L Q LSF VT G+ + V
Sbjct: 360 NVGGSGAVGAAWVKGDKTGWIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVV 181
Query: 233 PADWMFAQTF 204
P W F TF
Sbjct: 180 PGWWQFGMTF 151
>gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10889716, DNA
sequence
Length = 581
Score = 95.0 bits (201), Expect(2) = 9e-035
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = -1 / -1
Query: 596 AGGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLI 417
A GWCN PR H ++ + A+ + +AG++PV +RRVSC R+GG+RF ISG +F V I
Sbjct: 581 ANGWCNSPRRHFDMLQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVTI 402
Query: 416 TNVAADGEVAAVKVKGS 366
TNV G VAA + G+
Sbjct: 401 TNVGGAGAVAAAWIMGT 351
Score = 73.0 bits (153), Expect(2) = 9e-035
Identities = 26/54 (48%), Positives = 36/54 (66%)
Frame = -1 / -1
Query: 362 TGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFE 201
T W+ M RNWG+NWQ A+L + LSF+V G+ V A +VAPA+W F T++
Sbjct: 344 TDWLAMSRNWGENWQSGANLTGKALSFKVQTDDGKVVVADNVAPANWQFGSTYQ 183
>gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 664
Score = 143 bits (307), Expect = 2e-033
Identities = 56/90 (62%), Positives = 68/90 (75%)
Frame = -1 / +1
Query: 458 FTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSFE 279
FTI+G ++F VL+TNVA G+V +V ++GSRTGW PM RNWGQNWQ +ADL Q LSF+
Sbjct: 1 FTINGHSYFNLVLVTNVAGAGDVRSVSIRGSRTGWQPMSRNWGQNWQSNADLDGQALSFQ 180
Query: 278 VTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
VT GRTVT+ + APA W F QTFEG QF
Sbjct: 181 VTASDGRTVTSNNAAPAGWQFGQTFEGAQF 270
>gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211147, DNA
sequence
Length = 736
Score = 143 bits (306), Expect = 3e-033
Identities = 57/101 (56%), Positives = 70/101 (69%)
Frame = -1 / +2
Query: 491 RVSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCD 312
RV C ++GG+RFTI+G +F VLITNVA G++ VK S TGW+ M RNWGQNWQ +
Sbjct: 101 RVPCRKSGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKASSTGWLTMSRNWGQNWQSN 280
Query: 311 ADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
A L Q LSF VTG RT T+++ AP +W F QTFEGK F
Sbjct: 281 AILVGQALSFRVTGSDRRTSTSWNAAPRNWQFGQTFEGKNF 403
>gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_F04_A002 5', mRNA sequence
Length = 794
Score = 143 bits (306), Expect = 3e-033
Identities = 55/105 (52%), Positives = 73/105 (69%)
Frame = -1 / +1
Query: 596 AGGWCNFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLI 417
AGG CN P H L +F ++A KAGI+P+Q+RRV C R GG+RF+++G F VLI
Sbjct: 478 AGGHCNPPNHHFLLPIQSFEKIALWKAGIMPIQYRRVKCLREGGVRFSVNGRHFFFTVLI 657
Query: 416 TNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPLSF 282
+NV G+V +VK+KG+ GW+ MGRNWGQ W + D+R QPLSF
Sbjct: 658 SNVGGAGDVRSVKIKGTELGWLSMGRNWGQVWHINCDMRGQPLSF 792
>gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 3', mRNA sequence
Length = 731
Score = 143 bits (306), Expect = 3e-033
Identities = 57/93 (61%), Positives = 69/93 (74%)
Frame = -1 / +3
Query: 467 GMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRAQPL 288
G+RFTI+G ++F VL+TNVA G+V +V +KGS TGW PM RNWGQNWQ ++ L Q L
Sbjct: 3 GIRFTINGHSYFNLVLVTNVAGAGDVQSVSIKGSSTGWQPMSRNWGQNWQSNSLLDGQSL 182
Query: 287 SFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQF 189
SF+VT GRTVT+ VAPA W F QTFEG QF
Sbjct: 183 SFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 281
>gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113147, DNA
sequence
Length = 521
Score = 87.7 bits (185), Expect(2) = 4e-033
Identities = 36/72 (50%), Positives = 51/72 (70%)
Frame = -1 / -3
Query: 581 NFPREHLELSEAAFLRVAKAKAGIVPVQFRRVSCDRAGGMRFTISGSAHFLQVLITNVAA 402
N PR+H ++++ A+ R+ + GIVPV FRRV C R GG+RFT+SG +F VL+TNVA
Sbjct: 519 NPPRQHFDMAQPAWERIGVYQGGIVPVLFRRVPCRRRGGVRFTVSGRDYFELVLVTNVAG 340
Query: 401 DGEVAAVKVKGS 366
G V A+ V+G+
Sbjct: 339 AGAVRAMDVRGT 304
Score = 74.8 bits (157), Expect(2) = 4e-033
Identities = 29/58 (50%), Positives = 33/58 (56%)
Frame = -1 / -3
Query: 368 SRTGWIPMGRNWGQNWQCDADLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGK 195
S GW+PM RNWG NWQ A L Q LSF VT G+TV V P W F QT+ +
Sbjct: 303 SSAGWMPMSRNWGANWQSLAYLNGQGLSFRVTADDGQTVVFADVVPPSWTFGQTYASR 130
>gb|CW201862.1|CW201862 104_627_11184792_116_37108_082 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184792, DNA
sequence
Length = 701
Score = 141 bits (303), Expect = 7e-033
Identities = 52/104 (50%), Positives = 74/104 (71%)
Frame = -1 / -1
Query: 488 VSCDRAGGMRFTISGSAHFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDA 309
V C R GG+RF+++G F VLI+NV G+V +VK+KG+ GW+ MGRNWGQ W +
Sbjct: 329 VKCLREGGVRFSVNGRHFFFTVLISNVGGAGDVRSVKIKGTELGWLSMGRNWGQVWHINC 150
Query: 308 DLRAQPLSFEVTGGRGRTVTAYSVAPADWMFAQTFEGKQFAE*R 177
D+R QPLSFE++ G+T+T+++V P DW + +T+ GKQF *R
Sbjct: 149 DMRGQPLSFELSSSDGKTLTSFNVVPKDWEYGKTYTGKQFLL*R 18
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 510,344,969
Number of Sequences: 832831
Number of extensions: 5727433
Number of successful extensions: 92955
Number of sequences better than 1.0e-020: 116
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 17348744385
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)