TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2542512.2.1
(834 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW156276.1|CW156276 104_559_11146598_116_36378_061 Sorgh... 186 9e-080
gb|CW192718.1|CW192718 104_615_11179178_148_36775_011 Sorgh... 158 1e-076
gb|CW156277.1|CW156277 104_559_11146598_148_36377_061 Sorgh... 186 2e-075
gb|BE357860.1|BE357860 DG1_22_C12.g1_A002 Dark Grown 1 (DG1... 184 1e-074
gb|CX613643.1|CX613643 GABR1_9_H05.b1_A002 GA- or brassinol... 182 3e-074
gb|BE355191.1|BE355191 DG1_10_D02.g1_A002 Dark Grown 1 (DG1... 184 2e-072
gb|CW193504.1|CW193504 104_616_11179600_148_36779_058 Sorgh... 158 4e-070
gb|CX610228.1|CX610228 ANR1_17_H06.b1_A002 Anaerobic roots ... 158 2e-069
gb|BE362029.1|BE362029 DG1_83_E01.g1_A002 Dark Grown 1 (DG1... 184 1e-066
gb|CN147616.1|CN147616 WOUND1_50_G10.g1_A002 Wounded leaves... 149 2e-066
gb|CD226055.1|CD226055 CCC1_43_F04.b1_A007 Callus culture/c... 186 4e-065
gb|BZ779926.1|BZ779926 ii35e07.g1 WGS-SbicolorF (DH5a methy... 149 5e-065
gb|CW188052.1|CW188052 104_607_11172812_116_36728_070 Sorgh... 149 9e-065
gb|CD427023.1|CD427023 SA1_17_C08.b1_A002 Salicylic acid-tr... 149 4e-059
gb|CD464006.1|CD464006 ETH1_48_F01.b1_A002 Ethylene-treated... 153 2e-058
gb|CN140087.1|CN140087 OX1_34_B02.b1_A002 Oxidatively-stres... 94 1e-057
gb|CW442457.1|CW442457 fsbb001f162c05k0 Sorghum methylation... 119 2e-057
gb|CD212860.1|CD212860 HS1_17_H04.b1_A012 Heat-shocked seed... 149 4e-054
gb|CW263276.1|CW263276 104_731_11230595_116_35213_042 Sorgh... 102 5e-053
gb|BE360028.1|BE360028 DG1_60_C08.g2_A002 Dark Grown 1 (DG1... 184 9e-053
gb|BE363286.1|BE363286 WS1_61_D09.g1_A002 Water-stressed 1 ... 184 9e-053
gb|BG933110.1|BG933110 WS1_29_D01.b1_A002 Water-stressed 1 ... 102 1e-051
gb|CD205908.1|CD205908 HS1_19_B08.b1_A012 Heat-shocked seed... 149 2e-049
gb|CL184034.1|CL184034 104_397_10898577_116_32364_047 Sorgh... 94 3e-047
gb|BE357452.1|BE357452 DG1_15_A08.b2_A002 Dark Grown 1 (DG1... 117 4e-046
gb|BE363200.1|BE363200 WS1_61_D09.b1_A002 Water-stressed 1 ... 117 4e-046
gb|CL161359.1|CL161359 104_352_10805664_114_31826_336 Sorgh... 78 2e-045
gb|CB924446.1|CB924446 ABA1_21_F08.b1_A012 Abscisic acid-tr... 149 4e-044
gb|AW679544.1|AW679544 WS1_29_D01.g1_A002 Water-stressed 1 ... 149 4e-044
gb|CW256586.1|CW256586 104_721_11226871_116_35138_020 Sorgh... 92 1e-043
gb|CF430593.1|CF430593 NIT1_3_A05.b1_A002 Nitrogen-deficien... 92 6e-043
gb|CL161360.1|CL161360 104_352_10805664_116_31827_336 Sorgh... 76 2e-039
gb|AW922538.1|AW922538 DG1_20_D10.g1_A002 Dark Grown 1 (DG1... 162 5e-039
gb|CW393838.1|CW393838 fsbb001f081b07f0 Sorghum methylation... 117 2e-038
gb|CW485262.1|CW485262 fsbb001f247o06f0 Sorghum methylation... 80 1e-037
gb|CW255081.1|CW255081 104_719_11226032_116_35125_024 Sorgh... 80 3e-037
gb|AW922289.1|AW922289 DG1_17_H09.g1_A002 Dark Grown 1 (DG1... 153 3e-036
gb|CW485263.1|CW485263 fsbb001f247o06k0 Sorghum methylation... 75 9e-035
gb|CW246873.1|CW246873 104_707_11221518_148_35089_019 Sorgh... 105 2e-034
gb|CF770824.1|CF770824 DSBF1_10_B04.g1_A010 Drought-stresse... 147 3e-034
gb|CW253791.1|CW253791 104_717_11225292_148_35107_038 Sorgh... 139 3e-034
gb|CW193503.1|CW193503 104_616_11179600_116_36780_058 Sorgh... 109 7e-034
gb|CW428466.1|CW428466 fsbb001f141c22k0 Sorghum methylation... 105 9e-034
gb|CW034873.1|CW034873 104_265_10502820_114_30378 Sorghum m... 139 2e-033
gb|CW483941.1|CW483941 fsbb001f245n05k0 Sorghum methylation... 85 4e-032
gb|CW253790.1|CW253790 104_717_11225292_116_35111_038 Sorgh... 107 4e-032
gb|CW296832.1|CW296832 104_778_11461724_116_35631_068 Sorgh... 73 4e-032
gb|CW229839.1|CW229839 104_671_11207529_148_37263_041 Sorgh... 82 2e-031
gb|BG464902.1|BG464902 EM1_35_G06.g1_A002 Embryo 1 (EM1) So... 136 5e-031
gb|CW491815.1|CW491815 fsbb001f281n13k0 Sorghum methylation... 80 2e-030
gb|CW355674.1|CW355674 fsbb001f020g14k0 Sorghum methylation... 102 4e-030
gb|CW485737.1|CW485737 fsbb001f248k03f0 Sorghum methylation... 105 6e-030
gb|BG464759.1|BG464759 EM1_33_G05.g1_A002 Embryo 1 (EM1) So... 130 2e-029
gb|CW338726.1|CW338726 104_839_11484895_148_36135_030 Sorgh... 76 2e-028
gb|CD424723.1|CD424723 SA1_7_D01.b1_A002 Salicylic acid-tre... 126 6e-028
gb|BG464757.1|BG464757 EM1_33_G01.g1_A002 Embryo 1 (EM1) So... 125 8e-028
gb|CL157599.1|CL157599 104_345_10783700_116_31478_260 Sorgh... 70 8e-028
gb|CW082297.1|CW082297 104_424_10943587_114_32382_080 Sorgh... 89 2e-027
gb|CL197202.1|CL197202 104_424_10943587_114_32333_080 Sorgh... 89 2e-027
gb|CW270090.1|CW270090 104_741_11402213_148_35326_021 Sorgh... 73 3e-027
gb|CW416553.1|CW416553 fsbb001f117c13k0 Sorghum methylation... 66 3e-027
gb|CN138190.1|CN138190 OX1_62_F08.b1_A002 Oxidatively-stres... 66 3e-027
gb|CW209240.1|CW209240 104_639_11189127_148_36990_062 Sorgh... 65 7e-027
gb|CW115514.1|CW115514 104_490_11106601_148_34588_003 Sorgh... 69 1e-026
gb|BE359601.1|BE359601 DG1_54_G12.g2_A002 Dark Grown 1 (DG1... 70 1e-026
gb|CL155529.1|CL155529 104_341_10782204_116_31472_300 Sorgh... 63 1e-026
gb|CW176056.1|CW176056 104_588_11158283_148_36575_034 Sorgh... 79 2e-026
gb|AC152913.1| Sorghum bicolor clone SB106M24, *** SEQUENCI... 62 7e-026
gb|CW236515.1|CW236515 104_692_11215656_148_37499_088 Sorgh... 70 8e-026
gb|CX612756.1|CX612756 GABR1_4_F12.b1_A002 GA- or brassinol... 70 1e-025
gb|CW029992.1|CW029992 104_257_10499993_114_30401 Sorghum m... 73 1e-025
gb|AW285419.1|AW285419 LG1_251_B11.g1_A002 Light Grown 1 (L... 92 4e-025
gb|CX617035.1|CX617035 GABR1_31_G05.b1_A002 GA- or brassino... 92 4e-025
gb|CW216764.1|CW216764 104_649_11195288_148_37123_020 Sorgh... 73 4e-025
gb|CW246874.1|CW246874 104_707_11221518_148_37607_019 Sorgh... 105 4e-025
gb|CL151424.1|CL151424 104_334_10779238_116_31362_022 Sorgh... 70 5e-025
gb|CD222314.1|CD222314 CCC1_21_E10.b1_A007 Callus culture/c... 76 9e-025
gb|CW179942.1|CW179942 104_594_11160375_148_36632_060 Sorgh... 65 2e-024
gb|AF029856.1|AF029856 Sorghum bicolor cytochrome P450 CYP9... 65 2e-024
gb|CW420849.1|CW420849 fsbb001f128g04f0 Sorghum methylation... 62 2e-024
gb|CX609001.1|CX609001 ANR1_10_B10.b1_A002 Anaerobic roots ... 65 3e-024
gb|CN124664.1|CN124664 RHOH1_6_E02.b1_A002 Acid- and alkali... 62 3e-024
gb|CN143955.1|CN143955 WOUND1_19_H05.b1_A002 Wounded leaves... 69 3e-024
gb|CW472079.1|CW472079 fsbb001f226m01f0 Sorghum methylation... 65 7e-024
gb|BF587013.1|BF587013 FM1_32_B12.g1_A003 Floral-Induced Me... 63 8e-024
gb|CW317464.1|CW317464 104_809_11473427_116_35861_044 Sorgh... 62 1e-023
gb|CW320841.1|CW320841 104_814_11475226_148_35937_047 Sorgh... 68 2e-023
gb|CW320840.1|CW320840 104_814_11475226_116_35933_047 Sorgh... 68 2e-023
gb|CW282234.1|CW282234 104_758_11408605_148_35469_059 Sorgh... 55 3e-023
gb|CW235176.1|CW235176 104_690_11214843_116_37409_010 Sorgh... 51 4e-023
gb|CW132069.1|CW132069 104_515_11116013_148_34794_027 Sorgh... 64 4e-023
gb|CW207619.1|CW207619 104_636_11188248_116_36976_082 Sorgh... 77 4e-023
gb|CW207620.1|CW207620 104_636_11188248_148_36968_082 Sorgh... 77 4e-023
gb|CL193600.1|CL193600 104_417_10941045_114_32273_089 Sorgh... 65 7e-023
gb|CW164995.1|CW164995 104_573_11152274_116_36471_011 Sorgh... 54 1e-022
gb|CW485738.1|CW485738 fsbb001f248k03k0 Sorghum methylation... 105 2e-022
gb|CW318281.1|CW318281 104_810_11473865_148_35869_073 Sorgh... 63 2e-022
gb|CW237418.1|CW237418 104_693_11216154_148_37516_067 Sorgh... 63 2e-022
gb|BE360582.1|BE360582 DG1_64_D09.g1_A002 Dark Grown 1 (DG1... 73 2e-022
gb|BE360601.1|BE360601 DG1_64_C08.g1_A002 Dark Grown 1 (DG1... 73 2e-022
gb|CD233891.1|CD233891 SS1_5_B04.b1_A012 Salt-stressed seed... 84 3e-022
gb|CW176055.1|CW176055 104_588_11158283_116_36574_034 Sorgh... 106 3e-022
gb|CW119823.1|CW119823 104_497_11108979_116_34640_016 Sorgh... 63 4e-022
gb|CW043503.1|CW043503 104_279_10508404_114_30276 Sorghum m... 106 5e-022
gb|CW372570.1|CW372570 fsbb001f048i11k0 Sorghum methylation... 106 5e-022
gb|CW360728.1|CW360728 fsbb001f028p06f0 Sorghum methylation... 78 5e-022
gb|CW351440.1|CW351440 fsbb001f013d07k0 Sorghum methylation... 78 6e-022
gb|CL155528.1|CL155528 104_341_10782204_114_31471_300 Sorgh... 61 1e-021
gb|BG410749.1|BG410749 EM1_25_F07.g1_A002 Embryo 1 (EM1) So... 68 1e-021
gb|CW490045.1|CW490045 fsbb001f275e17k0 Sorghum methylation... 54 1e-021
gb|CW495205.1|CW495205 fsbb001f286n22k0 Sorghum methylation... 60 1e-021
gb|CW260389.1|CW260389 104_727_11228940_116_35196_046 Sorgh... 57 2e-021
gb|CW247245.1|CW247245 104_708_11221685_116_35017_027 Sorgh... 62 2e-021
gb|CW044186.1|CW044186 104_280_10508807_115_30242 Sorghum m... 49 4e-021
gb|CW481125.1|CW481125 fsbb001f240i12k0 Sorghum methylation... 66 4e-021
gb|CW481124.1|CW481124 fsbb001f240i12f0 Sorghum methylation... 66 4e-021
gb|CW209173.1|CW209173 104_639_11189089_116_37080_013 Sorgh... 66 4e-021
gb|CW460451.1|CW460451 fsbb001f207k13f0 Sorghum methylation... 50 5e-021
gb|BG933235.1|BG933235 WS1_91_H08.g1_A002 Water-stressed 1 ... 62 7e-021
>gb|CW156276.1|CW156276 104_559_11146598_116_36378_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146598, DNA
sequence
Length = 724
Score = 186 bits (401), Expect(3) = 9e-080
Identities = 74/100 (74%), Positives = 81/100 (81%)
Frame = +2 / +2
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 257 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 436
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
IQCF WDR+DG EIDMTE+GGLTMPRAVPLEATCKPR A+
Sbjct: 437 IQCFDWDRVDGVEIDMTEAGGLTMPRAVPLEATCKPRAAV 556
Score = 156 bits (335), Expect(2) = 3e-058
Identities = 70/108 (64%), Positives = 74/108 (68%)
Frame = -1 / -2
Query: 654 NQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRR 475
+ SC RT A+RGL VASNGTARGMVSPP SVMSIS PS LSQ KHW+SV STRP VR
Sbjct: 582 DHSCLRTSLTAARGLHVASNGTARGMVSPPASVMSISTPSTLSQSKHWISVPSTRPTVRS 403
Query: 474 ASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
ASVSPGH RRPIPNG SRPSALP LW+AYA
Sbjct: 402 ASVSPGHFRRPIPNGISSRPSALPSSKRSGLNSAGSSHTAGSLWIAYA 259
Score = 143 bits (306), Expect(2) = 1e-037
Identities = 60/104 (57%), Positives = 72/104 (69%)
Frame = -3 / -1
Query: 706 TATHTRENRDENV*HIDQSELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSV 527
T T+ R + H +S+LL+N+TH RLA GLQRDGPGHG+PA LGHVD ++SV
Sbjct: 634 TFTYRRVRT*DMPKHYSRSQLLENITHSCTRLARGLQRDGPGHGQPAGLGHVDFDTVNSV 455
Query: 526 PVEALDERGEHEAGGPQSERLPGAPAPSHPERQHQPALGLAVAE 395
PVEALD+ EH+A PQ E LPG +P HPER QP LGLAV E
Sbjct: 454 PVEALDQCPEHQADSPQRECLPGTLSPPHPERHQQPPLGLAVLE 323
Score = 117 bits (251), Expect(3) = 9e-080
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1 / +2
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRLIT DDVP LGYL CVINETLR+YP APLLLPHES+ADC VGGY+VPRGTLL V
Sbjct: 89 SRLITPDDVPRLGYLHCVINETLRMYPAAPLLLPHESSADCNVGGYDVPRGTLLIV 256
Score = 90.9 bits (192), Expect(2) = 3e-058
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMT CR*P GTSS V+
Sbjct: 255 TISSVPRGTS*PPTLQSADDSCGRSSGAAGYMRRVSLMTQCR*PRRGTSSGVI 97
Score = 63.8 bits (133), Expect(5) = 2e-021
Identities = 32/60 (53%), Positives = 38/60 (63%)
Frame = +3 / +3
Query: 546 RST*PRAAGSPCPGPSRWRPPASLAKPCVMFFSSSDWSMC*TFSSLFSLVCVAVRTARAS 725
+ST*PR AG PCPGPSRWRP ASL + VMF SS D C S + +L+ V V + S
Sbjct: 474 KST*PRPAG*PCPGPSRWRPRASLVQL*VMFSSSCDLL*CFGIS*VLTLL*VKVSSVVCS 653
Score = 37.7 bits (76), Expect(2) = 1e-037
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1 / -1
Query: 222 LVDDALQVAQPRHVVHGDEAG 160
LVDDA+QVA+ HV+ GD+AG
Sbjct: 151 LVDDAVQVAEAGHVIRGDQAG 89
Score = 33.6 bits (67), Expect(3) = 9e-080
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2 / +2
Query: 74 TIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
T EWAMSLLLNHP VG
Sbjct: 2 TTEWAMSLLLNHPEALNKARAEIDAVVG 85
Score = 30.9 bits (61), Expect(5) = 2e-021
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3 / +3
Query: 429 CRSGWDGAGAPGRRS 473
CRSGW G PGR S
Sbjct: 357 CRSGWGGESVPGRHS 401
Score = 30.4 bits (60), Expect(5) = 2e-021
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3 / +1
Query: 159 VPPHHHGRRAGAGLPAVRHQ 218
+PP H G RA LPA+RHQ
Sbjct: 88 LPPDHPG*RAPPRLPALRHQ 147
Score = 27.6 bits (54), Expect(5) = 2e-021
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3 / +1
Query: 279 LHGRRLRSAPRHAAVR 326
L RRLR APRHAA R
Sbjct: 208 LQRRRLRRAPRHAADR 255
Score = 22.1 bits (42), Expect(5) = 2e-021
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1 / +1
Query: 73 HDRMGHV 93
HDRMGHV
Sbjct: 1 HDRMGHV 21
>gb|CW192718.1|CW192718 104_615_11179178_148_36775_011 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179178, DNA
sequence
Length = 730
Score = 158 bits (339), Expect(4) = 1e-076
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPR 586
+AEGRL++PFGMGRR+CPGE LALRT GLVL TLIQCF WDR+DG E+DM ESGGLTMPR
Sbjct: 378 QAEGRLLMPFGMGRRKCPGEALALRTVGLVLGTLIQCFDWDRVDGVEVDMAESGGLTMPR 557
Query: 587 AVPLEATCKPREAMR 631
AVPLEA CKPR AMR
Sbjct: 558 AVPLEALCKPRAAMR 602
Score = 153 bits (328), Expect(3) = 1e-061
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = -3 / -3
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SELLKN+TH ARLA GLQRDGPGHG+PAALGHVDL++I+ VPVEALD+R EH+ GPQ
Sbjct: 623 SELLKNITHSCARLAQGLQRDGPGHGQPAALGHVDLNSINPVPVEALDQRAEHQPDGPQR 444
Query: 472 ERLPGAPAPSHPERQHQPALGL 407
ERLPGA AP HPER QP LGL
Sbjct: 443 ERLPGALAPPHPERHQQPPLGL 378
Score = 133 bits (284), Expect(3) = 4e-038
Identities = 60/81 (74%), Positives = 64/81 (79%)
Frame = -1 / -1
Query: 651 QSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRA 472
QS *RT R+A+RGL AS+GTA GMVSPPLS MS S PS LSQ KHW+SV ST P VR A
Sbjct: 622 QSF*RTSRIAARGLHRASSGTALGMVSPPLSAMSTSTPSTLSQSKHWISVPSTSPTVRSA 443
Query: 471 SVSPGHLRRPIPNGSISRPSA 409
S SPGHLRRPIPNG SRPSA
Sbjct: 442 SASPGHLRRPIPNGISSRPSA 380
Score = 109 bits (233), Expect(4) = 1e-076
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = +1 / +3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+T DDV L YLQC+INETLRL+P APLLLPHES+ADC VGGY+VPRGT+L V
Sbjct: 129 SRLVTADDVSRLTYLQCIINETLRLHPAAPLLLPHESSADCKVGGYDVPRGTMLLV 296
Score = 87.7 bits (185), Expect(3) = 1e-061
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = -2 / -1
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMV 171
T+S VPRGTS*PPT+QSA DSCGSSSGA G RRSVSLM HCR* TSS V
Sbjct: 295 TSSIVPRGTS*PPTLQSAEDSCGSSSGAAGCRRSVSLMMHCR*VRRDTSSAV 140
Score = 72.5 bits (152), Expect(4) = 2e-030
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3 / +1
Query: 537 MALRST*PRAAGSPCPGPSRWRPPASLAKPCVMFFSSSD 653
M LRST PRAAG PCPGPSRWRP AS A+ CVMFF SS+
Sbjct: 508 MELRSTWPRAAG*PCPGPSRWRPCASRAQLCVMFFRSSE 624
Score = 53.8 bits (111), Expect(4) = 1e-076
Identities = 23/39 (58%), Positives = 24/39 (61%)
Frame = +2 / +3
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
LF AGTETTS+T EWAMSLLLNHP VG
Sbjct: 9 LFLAGTETTSTTTEWAMSLLLNHPEVLKKAQAEIDAAVG 125
Score = 48.3 bits (99), Expect(4) = 2e-030
Identities = 22/54 (40%), Positives = 23/54 (42%)
Frame = +3 / +2
Query: 159 VPPHHHGRRAGAGLPAVRHQXXXXXXXXXXXXXXXXXXXXLHGRRLRSAPRHAA 320
+PP GRR LPAV HQ L GRRLR APRH A
Sbjct: 128 LPPGDRGRRVSPHLPAVHHQRDAAPAPSRAAAAAARVLRRLQGRRLRRAPRHDA 289
Score = 37.7 bits (76), Expect(3) = 4e-038
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 222 LVDDALQVAQPRHVVHGDEAG 160
LVDDALQV + RHVV G +AG
Sbjct: 191 LVDDALQVGEARHVVRGHQAG 129
Score = 37.3 bits (75), Expect(4) = 2e-030
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 429 CRSGWDGAGAPGRRS 473
CRSGW GA APGRRS
Sbjct: 400 CRSGWGGASAPGRRS 444
Score = 36.3 bits (73), Expect(3) = 1e-061
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -1 / -1
Query: 156 PTXXXXXXXXXXXXXXXXXXSDMAHSIVDDVVSVPAVNK 40
PT SDMAHS+V DVVSVPA NK
Sbjct: 124 PTAASISACAFLRTSGWFSRSDMAHSVVVDVVSVPARNK 8
Score = 31.3 bits (62), Expect(4) = 2e-030
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +1 / +2
Query: 40 LVYSRNGDDVVHDRMGHV 93
L+ RNGD V HD MGHV
Sbjct: 8 LISRRNGDHVHHDGMGHV 61
Score = 30.9 bits (61), Expect(3) = 4e-038
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 92 TWPILSWTTSSPFR 51
TWPI SW T SPFR
Sbjct: 60 TWPIPSWWTWSPFR 19
Score = 24.4 bits (47), Expect(4) = 1e-076
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAW 364
+ +A+HRDP W
Sbjct: 297 NVHAVHRDPVVW 332
>gb|CW156277.1|CW156277 104_559_11146598_148_36377_061 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11146598, DNA
sequence
Length = 720
Score = 186 bits (401), Expect(2) = 2e-075
Identities = 74/100 (74%), Positives = 81/100 (81%)
Frame = +2 / -1
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 480 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 301
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
IQCF WDR+DG EIDMTE+GGLTMPRAVPLEATCKPR A+
Sbjct: 300 IQCFDWDRVDGVEIDMTEAGGLTMPRAVPLEATCKPRAAV 181
Score = 156 bits (335), Expect(2) = 3e-058
Identities = 70/108 (64%), Positives = 74/108 (68%)
Frame = -1 / +2
Query: 654 NQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRR 475
+ SC RT A+RGL VASNGTARGMVSPP SVMSIS PS LSQ KHW+SV STRP VR
Sbjct: 155 DHSCLRTSLTAARGLHVASNGTARGMVSPPASVMSISTPSTLSQSKHWISVPSTRPTVRS 334
Query: 474 ASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
ASVSPGH RRPIPNG SRPSALP LW+AYA
Sbjct: 335 ASVSPGHFRRPIPNGISSRPSALPSSKRSGLNSAGSSHTAGSLWIAYA 478
Score = 143 bits (306), Expect(2) = 1e-037
Identities = 60/104 (57%), Positives = 72/104 (69%)
Frame = -3 / +1
Query: 706 TATHTRENRDENV*HIDQSELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSV 527
T T+ R + H +S+LL+N+TH RLA GLQRDGPGHG+PA LGHVD ++SV
Sbjct: 103 TFTYRRVRT*DMPKHYSRSQLLENITHSCTRLARGLQRDGPGHGQPAGLGHVDFDTVNSV 282
Query: 526 PVEALDERGEHEAGGPQSERLPGAPAPSHPERQHQPALGLAVAE 395
PVEALD+ EH+A PQ E LPG +P HPER QP LGLAV E
Sbjct: 283 PVEALDQCPEHQADSPQRECLPGTLSPPHPERHQQPPLGLAVLE 414
Score = 117 bits (251), Expect(2) = 2e-075
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1 / -1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRLIT DDVP LGYL CVINETLR+YP APLLLPHES+ADC VGGY+VPRGTLL V
Sbjct: 648 SRLITPDDVPRLGYLHCVINETLRMYPAAPLLLPHESSADCNVGGYDVPRGTLLIV 481
Score = 90.9 bits (192), Expect(2) = 3e-058
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = -2 / +2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMT CR*P GTSS V+
Sbjct: 482 TISSVPRGTS*PPTLQSADDSCGRSSGAAGYMRRVSLMTQCR*PRRGTSSGVI 640
Score = 37.7 bits (76), Expect(2) = 1e-037
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1 / +1
Query: 222 LVDDALQVAQPRHVVHGDEAG 160
LVDDA+QVA+ HV+ GD+AG
Sbjct: 586 LVDDAVQVAEAGHVIRGDQAG 648
>gb|BE357860.1|BE357860 DG1_22_C12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 695
Score = 184 bits (396), Expect(2) = 1e-074
Identities = 74/101 (73%), Positives = 79/101 (78%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 214 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 393
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAMR 631
IQC WDR+DG EIDMT GGLTMPRAVPLEATCKPR AMR
Sbjct: 394 IQCIDWDRVDGLEIDMTAGGGLTMPRAVPLEATCKPRAAMR 516
Score = 150 bits (322), Expect(2) = 3e-058
Identities = 70/115 (60%), Positives = 77/115 (66%)
Frame = -1 / -1
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 560 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 381
Query: 495 TRPAVRRASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
T P VR ASVSPGHLRRPIPNG SRPSALP LW+AYA
Sbjct: 380 TSPTVRSASVSPGHLRRPIPNGISSRPSALPSSNRSGLNSAGSSHTAGSLWIAYA 216
Score = 146 bits (314), Expect(2) = 1e-038
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = -3 / -3
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 537 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 358
Query: 472 ERLPGAPAPSHPERQHQPALGLAVAE 395
ERLPGA AP HPER QP LGLAV E
Sbjct: 357 ERLPGALAPPHPERHQQPPLGLAVLE 280
Score = 117 bits (251), Expect(2) = 1e-074
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRLIT +DVP LGYLQCVINETLR+YP APLLLPHES ADC VGGY+VPRGTLL V
Sbjct: 46 SRLITAEDVPRLGYLQCVINETLRMYPAAPLLLPHESAADCKVGGYDVPRGTLLIV 213
Score = 96.8 bits (205), Expect(2) = 3e-058
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -2 / -1
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMTHCR*P GTSS V+
Sbjct: 212 TISSVPRGTS*PPTLQSAADSCGRSSGAAGYMRRVSLMTHCR*PRRGTSSAVI 54
Score = 63.8 bits (133), Expect(4) = 9e-023
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3 / +2
Query: 537 MALRST*PRAAGSPCPGPSRWRPPASLAKPCVMFFSSSD 653
MA R T*PR AG PCPGPSRWRP ASL + C MF SS+
Sbjct: 422 MAWRLT*PRVAG*PCPGPSRWRPRASLVQLCAMF*WSSE 538
Score = 37.3 bits (75), Expect(4) = 9e-023
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 429 CRSGWDGAGAPGRRS 473
CRSGW GA APGRRS
Sbjct: 314 CRSGWGGASAPGRRS 358
Score = 36.8 bits (74), Expect(2) = 1e-038
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -3
Query: 222 LVDDALQVAQPRHVVHGDEAG 160
LVDDALQVA+ RHV GD+ G
Sbjct: 108 LVDDALQVAEARHVFCGDQPG 46
Score = 31.3 bits (62), Expect(4) = 9e-023
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / +3
Query: 279 LHGRRLRSAPRHAAVR 326
L GRRLR APRHAA R
Sbjct: 165 LQGRRLRRAPRHAADR 212
Score = 30.4 bits (60), Expect(4) = 9e-023
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3 / +3
Query: 159 VPPHHHGRRAGAGLPAVRHQ 218
+P H RRA LPAVRHQ
Sbjct: 45 LPADHRRRRASPRLPAVRHQ 104
>gb|CX613643.1|CX613643 GABR1_9_H05.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_9_H05_A002 3', mRNA sequence
Length = 604
Score = 182 bits (393), Expect(2) = 3e-074
Identities = 73/100 (73%), Positives = 80/100 (80%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAI RDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 177 NAYAIRRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 356
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
IQCF WDR+DG EIDMTE+GGLTMPRAVPLEATCKPR A+
Sbjct: 357 IQCFDWDRVDGVEIDMTEAGGLTMPRAVPLEATCKPRAAV 476
Score = 149 bits (321), Expect(2) = 2e-056
Identities = 69/108 (63%), Positives = 73/108 (67%)
Frame = -1 / -1
Query: 654 NQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRR 475
+ SC RT A+RGL VASNGTARGMVSPP SVMSIS PS LSQ KHW+SV STRP VR
Sbjct: 502 DHSCLRTSLTAARGLHVASNGTARGMVSPPASVMSISTPSTLSQSKHWISVPSTRPTVRS 323
Query: 474 ASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
ASVSPGH RRPIPNG SRPSALP L +AYA
Sbjct: 322 ASVSPGHFRRPIPNGISSRPSALPSSKRSGLNSAGSSHTAGSLRIAYA 179
Score = 143 bits (306), Expect(2) = 6e-038
Identities = 60/104 (57%), Positives = 72/104 (69%)
Frame = -3 / -3
Query: 706 TATHTRENRDENV*HIDQSELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSV 527
T T+ R + H +S+LL+N+TH RLA GLQRDGPGHG+PA LGHVD ++SV
Sbjct: 554 TFTYRRVRT*DMPKHYSRSQLLENITHSCTRLARGLQRDGPGHGQPAGLGHVDFDTVNSV 375
Query: 526 PVEALDERGEHEAGGPQSERLPGAPAPSHPERQHQPALGLAVAE 395
PVEALD+ EH+A PQ E LPG +P HPER QP LGLAV E
Sbjct: 374 PVEALDQCPEHQADSPQRECLPGTLSPPHPERHQQPPLGLAVLE 243
Score = 117 bits (251), Expect(2) = 3e-074
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1 / +3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRLIT DDVP LGYL CVINETLR+YP APLLLPHES+ADC VGGY+VPRGTLL V
Sbjct: 9 SRLITPDDVPRLGYLHCVINETLRMYPAAPLLLPHESSADCNVGGYDVPRGTLLIV 176
Score = 90.9 bits (192), Expect(2) = 2e-056
Identities = 41/53 (77%), Positives = 43/53 (81%)
Frame = -2 / -1
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMT CR*P GTSS V+
Sbjct: 175 TISSVPRGTS*PPTLQSADDSCGRSSGAAGYMRRVSLMTQCR*PRRGTSSGVI 17
Score = 38.2 bits (77), Expect(2) = 6e-038
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1 / -3
Query: 222 LVDDALQVAQPRHVVHGDEAG 160
LVDDA+QVA+ HV+ GD+AG
Sbjct: 71 LVDDAMQVAEAGHVIRGDQAG 9
>gb|BE355191.1|BE355191 DG1_10_D02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 594
Score = 184 bits (396), Expect(2) = 2e-072
Identities = 74/101 (73%), Positives = 79/101 (78%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 157 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 336
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAMR 631
IQC WDR+DG EIDMT GGLTMPRAVPLEATCKPR AMR
Sbjct: 337 IQCIDWDRVDGLEIDMTAGGGLTMPRAVPLEATCKPRAAMR 459
Score = 150 bits (322), Expect(2) = 1e-057
Identities = 70/115 (60%), Positives = 77/115 (66%)
Frame = -1 / -2
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 503 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 324
Query: 495 TRPAVRRASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
T P VR ASVSPGHLRRPIPNG SRPSALP LW+AYA
Sbjct: 323 TSPTVRSASVSPGHLRRPIPNGISSRPSALPSSNRSGLNSAGSSHTAGSLWIAYA 159
Score = 146 bits (314), Expect(2) = 7e-037
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = -3 / -1
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 480 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 301
Query: 472 ERLPGAPAPSHPERQHQPALGLAVAE 395
ERLPGA AP HPER QP LGLAV E
Sbjct: 300 ERLPGALAPPHPERHQQPPLGLAVLE 223
Score = 110 bits (234), Expect(2) = 2e-072
Identities = 43/52 (82%), Positives = 46/52 (88%)
Frame = +1 / +1
Query: 172 TMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
T +DVP LGYLQCVINETLR+YP APLLLPHES ADC VGGY+VPRGTLL V
Sbjct: 1 TAEDVPRLGYLQCVINETLRMYPAAPLLLPHESAADCKVGGYDVPRGTLLIV 156
Score = 95.0 bits (201), Expect(2) = 1e-057
Identities = 41/50 (82%), Positives = 42/50 (84%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSS 177
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMTHCR*P GTSS
Sbjct: 155 TISSVPRGTS*PPTLQSAADSCGRSSGAAGYMRRVSLMTHCR*PRRGTSS 6
Score = 63.8 bits (133), Expect(4) = 4e-021
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3 / +2
Query: 537 MALRST*PRAAGSPCPGPSRWRPPASLAKPCVMFFSSSD 653
MA R T*PR AG PCPGPSRWRP ASL + C MF SS+
Sbjct: 365 MAWRLT*PRVAG*PCPGPSRWRPRASLVQLCAMF*WSSE 481
Score = 37.3 bits (75), Expect(4) = 4e-021
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +2
Query: 429 CRSGWDGAGAPGRRS 473
CRSGW GA APGRRS
Sbjct: 257 CRSGWGGASAPGRRS 301
Score = 31.3 bits (62), Expect(4) = 4e-021
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / +3
Query: 279 LHGRRLRSAPRHAAVR 326
L GRRLR APRHAA R
Sbjct: 108 LQGRRLRRAPRHAADR 155
Score = 30.9 bits (61), Expect(2) = 7e-037
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 222 LVDDALQVAQPRHVVHG 172
LVDDALQVA+ RHV G
Sbjct: 51 LVDDALQVAEARHVFCG 1
Score = 24.9 bits (48), Expect(4) = 4e-021
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +3 / +3
Query: 180 RRAGAGLPAVRHQ 218
RRA LPAVRHQ
Sbjct: 9 RRASPRLPAVRHQ 47
>gb|CW193504.1|CW193504 104_616_11179600_148_36779_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179600, DNA
sequence
Length = 697
Score = 158 bits (339), Expect(4) = 4e-070
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = +2 / -3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPR 586
+AEGRL++PFGMGRR+CPGE LALRT GLVL TLIQCF WDR+DG E+DM ESGGLTMPR
Sbjct: 365 QAEGRLLMPFGMGRRKCPGEALALRTVGLVLGTLIQCFDWDRVDGVEVDMAESGGLTMPR 186
Query: 587 AVPLEATCKPREAMR 631
AVPLEA CKPR AMR
Sbjct: 185 AVPLEALCKPRAAMR 141
Score = 153 bits (328), Expect(2) = 2e-056
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = -3 / +3
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SELLKN+TH ARLA GLQRDGPGHG+PAALGHVDL++I+ VPVEALD+R EH+ GPQ
Sbjct: 120 SELLKNITHSCARLAQGLQRDGPGHGQPAALGHVDLNSINPVPVEALDQRAEHQPDGPQR 299
Query: 472 ERLPGAPAPSHPERQHQPALGL 407
ERLPGA AP HPER QP LGL
Sbjct: 300 ERLPGALAPPHPERHQQPPLGL 365
Score = 133 bits (284), Expect(2) = 1e-034
Identities = 60/81 (74%), Positives = 64/81 (79%)
Frame = -1 / +1
Query: 651 QSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRA 472
QS *RT R+A+RGL AS+GTA GMVSPPLS MS S PS LSQ KHW+SV ST P VR A
Sbjct: 121 QSF*RTSRIAARGLHRASSGTALGMVSPPLSAMSTSTPSTLSQSKHWISVPSTSPTVRSA 300
Query: 471 SVSPGHLRRPIPNGSISRPSA 409
S SPGHLRRPIPNG SRPSA
Sbjct: 301 SASPGHLRRPIPNGISSRPSA 363
Score = 109 bits (233), Expect(4) = 4e-070
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = +1 / -3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+T DDV L YLQC+INETLRL+P APLLLPHES+ADC VGGY+VPRGT+L V
Sbjct: 614 SRLVTADDVSRLTYLQCIINETLRLHPAAPLLLPHESSADCKVGGYDVPRGTMLLV 447
Score = 87.7 bits (185), Expect(2) = 2e-056
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = -2 / +1
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMV 171
T+S VPRGTS*PPT+QSA DSCGSSSGA G RRSVSLM HCR* TSS V
Sbjct: 448 TSSIVPRGTS*PPTLQSAEDSCGSSSGAAGCRRSVSLMMHCR*VRRDTSSAV 603
Score = 72.5 bits (152), Expect(3) = 2e-026
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3 / -1
Query: 537 MALRST*PRAAGSPCPGPSRWRPPASLAKPCVMFFSSSD 653
M LRST PRAAG PCPGPSRWRP AS A+ CVMFF SS+
Sbjct: 235 MELRSTWPRAAG*PCPGPSRWRPCASRAQLCVMFFRSSE 119
Score = 48.3 bits (99), Expect(3) = 2e-026
Identities = 22/54 (40%), Positives = 23/54 (42%)
Frame = +3 / -2
Query: 159 VPPHHHGRRAGAGLPAVRHQXXXXXXXXXXXXXXXXXXXXLHGRRLRSAPRHAA 320
+PP GRR LPAV HQ L GRRLR APRH A
Sbjct: 615 LPPGDRGRRVSPHLPAVHHQRDAAPAPSRAAAAAARVLRRLQGRRLRRAPRHDA 454
Score = 37.7 bits (76), Expect(2) = 1e-034
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / +3
Query: 222 LVDDALQVAQPRHVVHGDEAG 160
LVDDALQV + RHVV G +AG
Sbjct: 552 LVDDALQVGEARHVVRGHQAG 614
Score = 37.3 bits (75), Expect(3) = 2e-026
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / -1
Query: 429 CRSGWDGAGAPGRRS 473
CRSGW GA APGRRS
Sbjct: 343 CRSGWGGASAPGRRS 299
Score = 31.8 bits (63), Expect(4) = 4e-070
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2 / -3
Query: 80 EWAMSLLLNHPXXXXXXXXXXXXXVG 157
EWAMSLLLNHP VG
Sbjct: 695 EWAMSLLLNHPEVLKKAQAEIDAAVG 618
Score = 24.4 bits (47), Expect(4) = 4e-070
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2 / -3
Query: 329 HAYAIHRDPAAW 364
+ +A+HRDP W
Sbjct: 446 NVHAVHRDPVVW 411
>gb|CX610228.1|CX610228 ANR1_17_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_17_H06_A002 3', mRNA sequence
Length = 734
Score = 158 bits (339), Expect(4) = 2e-069
Identities = 61/75 (81%), Positives = 67/75 (89%)
Frame = +2 / +3
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPR 586
+AEGRL++PFGMGRR+CPGE LALRT GLVL TLIQCF WDR+DG E+DM ESGGLTMPR
Sbjct: 336 QAEGRLLMPFGMGRRKCPGEALALRTVGLVLGTLIQCFDWDRVDGVEVDMAESGGLTMPR 515
Query: 587 AVPLEATCKPREAMR 631
AVPLEA CKPR AMR
Sbjct: 516 AVPLEALCKPRAAMR 560
Score = 153 bits (328), Expect(2) = 9e-056
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = -3 / -1
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SELLKN+TH ARLA GLQRDGPGHG+PAALGHVDL++I+ VPVEALD+R EH+ GPQ
Sbjct: 581 SELLKNITHSCARLAQGLQRDGPGHGQPAALGHVDLNSINPVPVEALDQRAEHQPDGPQR 402
Query: 472 ERLPGAPAPSHPERQHQPALGL 407
ERLPGA AP HPER QP LGL
Sbjct: 401 ERLPGALAPPHPERHQQPPLGL 336
Score = 133 bits (284), Expect(2) = 1e-034
Identities = 60/81 (74%), Positives = 64/81 (79%)
Frame = -1 / -2
Query: 651 QSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRA 472
QS *RT R+A+RGL AS+GTA GMVSPPLS MS S PS LSQ KHW+SV ST P VR A
Sbjct: 580 QSF*RTSRIAARGLHRASSGTALGMVSPPLSAMSTSTPSTLSQSKHWISVPSTSPTVRSA 401
Query: 471 SVSPGHLRRPIPNGSISRPSA 409
S SPGHLRRPIPNG SRPSA
Sbjct: 400 SASPGHLRRPIPNGISSRPSA 338
Score = 107 bits (228), Expect(4) = 2e-069
Identities = 42/56 (75%), Positives = 48/56 (85%)
Frame = +1 / +3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+T DDV L YLQC+INET RL+P APLLLPHES+ADC VGGY+VPRGT+L V
Sbjct: 87 SRLVTADDVSRLTYLQCIINETXRLHPAAPLLLPHESSADCKVGGYDVPRGTMLLV 254
Score = 85.8 bits (181), Expect(2) = 9e-056
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMV 171
T+S VPRGTS*PPT+QSA DSCGSSSGA G RR VSLM HCR* TSS V
Sbjct: 253 TSSIVPRGTS*PPTLQSAEDSCGSSSGAAGCRRXVSLMMHCR*VRRDTSSAV 98
Score = 72.5 bits (152), Expect(3) = 3e-026
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3 / +1
Query: 537 MALRST*PRAAGSPCPGPSRWRPPASLAKPCVMFFSSSD 653
M LRST PRAAG PCPGPSRWRP AS A+ CVMFF SS+
Sbjct: 466 MELRSTWPRAAG*PCPGPSRWRPCASRAQLCVMFFRSSE 582
Score = 47.8 bits (98), Expect(3) = 3e-026
Identities = 23/54 (42%), Positives = 24/54 (44%)
Frame = +3 / +2
Query: 159 VPPHHHGRRAGAGLPAVRHQXXXXXXXXXXXXXXXXXXXXLHGRRLRSAPRHAA 320
+PP GRR LPAV HQ L GRRLR APRH A
Sbjct: 86 LPPGDRGRRVSPHLPAVHHQRDXAPAPSRAAAAAARVLRRLQGRRLRRAPRHDA 247
Score = 37.7 bits (76), Expect(2) = 1e-034
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 222 LVDDALQVAQPRHVVHGDEAG 160
LVDDALQV + RHVV G +AG
Sbjct: 149 LVDDALQVGEARHVVRGHQAG 87
Score = 37.3 bits (75), Expect(3) = 3e-026
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +3 / +1
Query: 429 CRSGWDGAGAPGRRS 473
CRSGW GA APGRRS
Sbjct: 358 CRSGWGGASAPGRRS 402
Score = 31.8 bits (63), Expect(4) = 2e-069
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2 / +3
Query: 80 EWAMSLLLNHPXXXXXXXXXXXXXVG 157
EWAMSLLLNHP VG
Sbjct: 6 EWAMSLLLNHPEVLKKAQAEIDAAVG 83
Score = 24.4 bits (47), Expect(4) = 2e-069
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAW 364
+ +A+HRDP W
Sbjct: 255 NVHAVHRDPVVW 290
>gb|BE362029.1|BE362029 DG1_83_E01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 654
Score = 184 bits (396), Expect(2) = 1e-066
Identities = 74/101 (73%), Positives = 79/101 (78%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 124 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 303
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAMR 631
IQC WDR+DG EIDMT GGLTMPRAVPLEATCKPR AMR
Sbjct: 304 IQCIDWDRVDGLEIDMTAGGGLTMPRAVPLEATCKPRAAMR 426
Score = 150 bits (322), Expect(2) = 2e-052
Identities = 70/115 (60%), Positives = 77/115 (66%)
Frame = -1 / -2
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 470 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 291
Query: 495 TRPAVRRASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
T P VR ASVSPGHLRRPIPNG SRPSALP LW+AYA
Sbjct: 290 TSPTVRSASVSPGHLRRPIPNGISSRPSALPSSNRSGLNSAGSSHTAGSLWIAYA 126
Score = 146 bits (314), Expect = 3e-034
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = -3 / -1
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 447 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 268
Query: 472 ERLPGAPAPSHPERQHQPALGLAVAE 395
ERLPGA AP HPER QP LGLAV E
Sbjct: 267 ERLPGALAPPHPERHQQPPLGLAVLE 190
Score = 90.9 bits (192), Expect(2) = 1e-066
Identities = 35/41 (85%), Positives = 37/41 (90%)
Frame = +1 / +1
Query: 205 QCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
QCVINETLR+YP APLLLPHES ADC VGGY+VPRGTLL V
Sbjct: 1 QCVINETLRMYPAAPLLLPHESAADCKVGGYDVPRGTLLIV 123
Score = 77.6 bits (163), Expect(2) = 2e-052
Identities = 33/40 (82%), Positives = 34/40 (85%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTH 207
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMTH
Sbjct: 122 TISSVPRGTS*PPTLQSAADSCGRSSGAAGYMRRVSLMTH 3
>gb|CN147616.1|CN147616 WOUND1_50_G10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_G10_A002 5', mRNA sequence
Length = 789
Score = 149 bits (319), Expect(3) = 2e-066
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / +3
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 417 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 596
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 597 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 740
Score = 103 bits (220), Expect(3) = 3e-032
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / -3
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 754 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 575
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 574 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 443
Score = 88.6 bits (187), Expect(3) = 2e-066
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +1 / +3
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ +D+P L YL C+I+ETLRLYP AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 276 RLLDKNDLPRLPYLHCIISETLRLYPAAPMLLPHEASTDCKIHGYDVPAGSMILV 440
Score = 55.6 bits (115), Expect(3) = 2e-066
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = +2 / +3
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
D I AL L AGTETTS+T+EWAMSLLLNHP
Sbjct: 123 DHFINALVPNLLGAGTETTSTTMEWAMSLLLNHP 224
Score = 46.0 bits (94), Expect(3) = 3e-032
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / -3
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
P GTS P +QS SCGSS GA G RRSVSLM R
Sbjct: 424 PAGTSYPWILQSVDASCGSSIGAAG*RRSVSLMMQWR 314
Score = 28.6 bits (56), Expect(3) = 3e-032
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = -1 / -3
Query: 93 DMAHSIVDDVVSVPAVNKXPHSAMI 19
D+AHS+V +VVSVPA ++ A++
Sbjct: 205 DIAHSMVVEVVSVPAPSRFGTRALM 131
>gb|CD226055.1|CD226055 CCC1_43_F04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_43_F04_A007 3', mRNA sequence
Length = 636
Score = 186 bits (401), Expect(2) = 4e-065
Identities = 74/100 (74%), Positives = 81/100 (81%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 117 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 296
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
IQCF WDR+DG EIDMTE+GGLTMPRAVPLEATCKPR A+
Sbjct: 297 IQCFDWDRVDGVEIDMTEAGGLTMPRAVPLEATCKPRAAV 416
Score = 155 bits (333), Expect(2) = 8e-052
Identities = 70/108 (64%), Positives = 74/108 (68%)
Frame = -1 / -3
Query: 654 NQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRR 475
+ SC RT A+RGL VASNGTARGMVSPP SVMSIS PS LSQ KHW+SV ST P VR
Sbjct: 442 DHSCLRTSLTAARGLHVASNGTARGMVSPPASVMSISTPSTLSQSKHWISVPSTSPTVRS 263
Query: 474 ASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
ASVSPGHLRRPIPNG SRPSALP LW+AYA
Sbjct: 262 ASVSPGHLRRPIPNGISSRPSALPSSKRSGLNSAGSSHTAGSLWIAYA 119
Score = 145 bits (312), Expect = 7e-034
Identities = 61/104 (58%), Positives = 73/104 (70%)
Frame = -3 / -2
Query: 706 TATHTRENRDENV*HIDQSELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSV 527
T T+ R + H +S+LL+N+TH RLA GLQRDGPGHG+PA LGHVD ++SV
Sbjct: 494 TFTYRRVRT*DMPKHYSRSQLLENITHSCTRLARGLQRDGPGHGQPAGLGHVDFDTVNSV 315
Query: 526 PVEALDERGEHEAGGPQSERLPGAPAPSHPERQHQPALGLAVAE 395
PV+ALD+ EH+ PQ ERLPGA AP HPER QP LGLAV E
Sbjct: 314 PVKALDQCPEHQPDSPQRERLPGALAPPHPERHQQPPLGLAVLE 183
Score = 83.5 bits (176), Expect(2) = 4e-065
Identities = 32/38 (84%), Positives = 35/38 (92%)
Frame = +1 / +3
Query: 214 INETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
INETLR+YP APLLLPHES+ADC VGGY+VPRGTLL V
Sbjct: 3 INETLRMYPAAPLLLPHESSADCNVGGYDVPRGTLLIV 116
Score = 70.3 bits (147), Expect(2) = 8e-052
Identities = 31/38 (81%), Positives = 32/38 (84%)
Frame = -2 / -3
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLM 213
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLM
Sbjct: 115 TISSVPRGTS*PPTLQSADDSCGRSSGAAGYMRRVSLM 2
>gb|BZ779926.1|BZ779926 ii35e07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii35e07, DNA sequence
Length = 688
Score = 149 bits (319), Expect(3) = 5e-065
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / -2
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 354 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 175
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 174 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 31
Score = 101 bits (215), Expect(3) = 2e-031
Identities = 50/99 (50%), Positives = 54/99 (54%)
Frame = -1 / +2
Query: 627 MASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVSPGHLR 448
M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A SPGHLR
Sbjct: 32 MFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFSPGHLR 211
Query: 447 RPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PIPNG I+ PSALP LWMAYA
Sbjct: 212 LPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 328
Score = 88.6 bits (187), Expect(3) = 5e-065
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ +D+P L YL C+I+ETLRLYP AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 495 RLLDKNDLPRLPYLHCIISETLRLYPAAPMLLPHEASTDCKIHGYDVPAGSMILV 331
Score = 51.0 bits (105), Expect(3) = 5e-065
Identities = 20/24 (83%), Positives = 22/24 (91%)
Frame = +2 / -3
Query: 41 LFTAGTETTSSTIEWAMSLLLNHP 112
L AGTETTS+T+EWAMSLLLNHP
Sbjct: 617 LLGAGTETTSTTMEWAMSLLLNHP 546
Score = 46.0 bits (94), Expect(3) = 2e-031
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +2
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
P GTS P +QS SCGSS GA G RRSVSLM R
Sbjct: 347 PAGTSYPWILQSVDASCGSSIGAAG*RRSVSLMMQWR 457
Score = 28.1 bits (55), Expect(3) = 2e-031
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1 / +1
Query: 93 DMAHSIVDDVVSVPAVNK 40
D+AHS+V +VVSVPA ++
Sbjct: 565 DIAHSMVVEVVSVPAPSR 618
>gb|CW188052.1|CW188052 104_607_11172812_116_36728_070 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11172812, DNA
sequence
Length = 667
Score = 149 bits (319), Expect(3) = 9e-065
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / -2
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 408 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 229
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 228 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 85
Score = 103 bits (220), Expect(3) = 5e-032
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / +2
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 71 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 250
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 251 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 382
Score = 88.6 bits (187), Expect(3) = 9e-065
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +1 / -2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ +D+P L YL C+I+ETLRLYP AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 549 RLLDKNDLPRLPYLHCIISETLRLYPAAPMLLPHEASTDCKIHGYDVPAGSMILV 385
Score = 50.1 bits (103), Expect(3) = 9e-065
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2 / -2
Query: 50 AGTETTSSTIEWAMSLLLNHP 112
AGTETTS+T+EWAMSLLLNHP
Sbjct: 663 AGTETTSTTMEWAMSLLLNHP 601
Score = 46.0 bits (94), Expect(3) = 5e-032
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / +2
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
P GTS P +QS SCGSS GA G RRSVSLM R
Sbjct: 401 PAGTSYPWILQSVDASCGSSIGAAG*RRSVSLMMQWR 511
Score = 27.6 bits (54), Expect(3) = 5e-032
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 93 DMAHSIVDDVVSVPA 49
D+AHS+V +VVSVPA
Sbjct: 620 DIAHSMVVEVVSVPA 664
>gb|CD427023.1|CD427023 SA1_17_C08.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_17_C08_A002 3', mRNA sequence
Length = 679
Score = 149 bits (319), Expect(3) = 4e-059
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / +1
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 226 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 405
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 406 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 549
Score = 103 bits (220), Expect(2) = 4e-029
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / -3
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 563 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 384
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 383 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 252
Score = 88.6 bits (187), Expect(3) = 4e-059
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +1 / +1
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ +D+P L YL C+I+ETLRLYP AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 85 RLLDKNDLPRLPYLHCIISETLRLYPAAPMLLPHEASTDCKIHGYDVPAGSMILV 249
Score = 46.0 bits (94), Expect(2) = 4e-029
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / -3
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
P GTS P +QS SCGSS GA G RRSVSLM R
Sbjct: 233 PAGTSYPWILQSVDASCGSSIGAAG*RRSVSLMMQWR 123
Score = 31.3 bits (62), Expect(3) = 4e-059
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +1
Query: 80 EWAMSLLLNHP 112
EWAMSLLLNHP
Sbjct: 1 EWAMSLLLNHP 33
>gb|CD464006.1|CD464006 ETH1_48_F01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_F01_A002 3', mRNA sequence
Length = 565
Score = 153 bits (329), Expect(3) = 2e-058
Identities = 60/75 (80%), Positives = 66/75 (88%)
Frame = +2 / +1
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPR 586
+AEGRL++ FGMGRR+CPGE LALRT GLVL TLIQCF WDR+DG E+DM ESGGLTMPR
Sbjct: 205 QAEGRLLMLFGMGRRKCPGEALALRTVGLVLGTLIQCFDWDRVDGVEVDMAESGGLTMPR 384
Query: 587 AVPLEATCKPREAMR 631
AVPLEA CKPR AMR
Sbjct: 385 AVPLEALCKPRAAMR 429
Score = 151 bits (324), Expect(2) = 2e-052
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = -3 / -2
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SELLKN+TH ARLA GLQRDGPGHG+PAALGHVDL++I+ VPVEALD+R EH+ GPQ
Sbjct: 450 SELLKNITHSCARLAQGLQRDGPGHGQPAALGHVDLNSINPVPVEALDQRAEHQPDGPQR 271
Query: 472 ERLPGAPAPSHPERQHQPALGL 407
ERLPGA AP HPE+ QP LGL
Sbjct: 270 ERLPGALAPPHPEQHQQPPLGL 205
Score = 130 bits (278), Expect = 3e-029
Identities = 59/81 (72%), Positives = 63/81 (77%)
Frame = -1 / -3
Query: 651 QSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRA 472
QS *RT R+A+RGL AS+GTA GMVSPPLS MS S PS LSQ KHW+SV ST P VR A
Sbjct: 449 QSF*RTSRIAARGLHRASSGTALGMVSPPLSAMSTSTPSTLSQSKHWISVPSTSPTVRSA 270
Query: 471 SVSPGHLRRPIPNGSISRPSA 409
S SPGHLRRPIPN SRPSA
Sbjct: 269 SASPGHLRRPIPNSISSRPSA 207
Score = 88.6 bits (187), Expect(3) = 2e-058
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = +1 / +1
Query: 205 QCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
QC+INETLRL+P APLLLPHES+ADC VGGY+VPRGT+L V
Sbjct: 1 QCIINETLRLHPAAPLLLPHESSADCKVGGYDVPRGTMLLV 123
Score = 76.2 bits (160), Expect(2) = 2e-052
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = -2 / -3
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTH 207
T+S VPRGTS*PPT+QSA DSCGSSSGA G RRSVSLM H
Sbjct: 122 TSSIVPRGTS*PPTLQSAEDSCGSSSGAAGCRRSVSLMMH 3
Score = 24.4 bits (47), Expect(3) = 2e-058
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAW 364
+ +A+HRDP W
Sbjct: 124 NVHAVHRDPVVW 159
>gb|CN140087.1|CN140087 OX1_34_B02.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_34_B02_A002 3', mRNA sequence
Length = 813
Score = 93.6 bits (198), Expect(4) = 1e-057
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +2 / +1
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA + +A+HRDP W GK++G+ MLPFGMGRRRCPGE LA++
Sbjct: 385 PAGTMLLVNVHAMHRDPRVWEEPERFSPERFEGGKSDGKWMLPFGMGRRRCPGEGLAVKM 564
Query: 485 AGLVLATLIQCFHWDRIDGAE 547
GL L TL+Q F W R G E
Sbjct: 565 VGLALGTLVQGFEWRRTTGDE 627
Score = 90.0 bits (190), Expect(4) = 1e-057
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
+R++ D+P L YL C++ ETLRL+PVAPLL PHES + C+VGGY+VP GT+L V
Sbjct: 241 ARILEGADLPNLPYLMCIVTETLRLHPVAPLLAPHESASHCSVGGYDVPAGTMLLV 408
Score = 63.4 bits (132), Expect(4) = 6e-030
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -2 / -2
Query: 329 VTNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
+T S VP GTS*PPT Q DSCG+ SGATG+RR VS+ H R
Sbjct: 410 LTRSIVPAGTS*PPTEQWEADSCGARSGATGWRRRVSVTMHMR 282
Score = 56.1 bits (116), Expect(4) = 6e-030
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / -2
Query: 546 SAPSILSQWKHWMSVASTRPAVRRASVSPGHLRRPIPNGSISRPSALP 403
S+P +L K SV S RP + A SPGH RRP+PNGSI PS P
Sbjct: 626 SSPVVLLHSKPCTSVPSARPTIFTARPSPGHRRRPMPNGSIHFPSLFP 483
Score = 53.8 bits (111), Expect(4) = 1e-057
Identities = 22/49 (44%), Positives = 27/49 (55%)
Frame = +2 / +1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
D +I ALC + GT+TTS+TIEW M+ LLNHP VG
Sbjct: 91 DKVIRALCLSILQTGTDTTSATIEWGMAQLLNHPAAMAKAQAEIDEVVG 237
Score = 44.6 bits (91), Expect(4) = 1e-057
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / +1
Query: 545 EIDMTESGGLTMPRAVPLEATCKPREAM 628
E+DMTE+ GLTMP++VPLEA PR M
Sbjct: 628 EVDMTEASGLTMPKSVPLEAFYWPRMEM 711
Score = 34.5 bits (69), Expect(4) = 6e-030
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1 / -2
Query: 618 RGLQVASNGTARGMVSPPLSVMSISAPSIL 529
RG ASNGT GMVSP SVMS S+ ++
Sbjct: 701 RGQ*NASNGTDFGMVSPDASVMSTSSSPVV 612
Score = 33.6 bits (67), Expect(4) = 6e-030
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 90 MAHSIVDDVVSVPAVNKXPHSAMIMVS 10
M HS+V DVVSVP HSA++ +S
Sbjct: 170 MPHSMVADVVSVPVCKMDKHSALMTLS 90
>gb|CW442457.1|CW442457 fsbb001f162c05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f162c05, DNA
sequence
Length = 554
Score = 119 bits (254), Expect(4) = 2e-057
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +1 / +1
Query: 166 LITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
LITMDDV GL YLQCVI+ETLRLYPVAPLLLPHES ADC VGGY+VPRGTLLFV
Sbjct: 199 LITMDDVAGLSYLQCVISETLRLYPVAPLLLPHESAADCAVGGYDVPRGTLLFV 360
Score = 114 bits (243), Expect(3) = 6e-047
Identities = 49/54 (90%), Positives = 50/54 (92%)
Frame = -2 / -1
Query: 329 VTNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
+TNSSVPRGTS*PPT QSA DSCGSSSGATGYRRSVSLMTHCR* SP TSSMVM
Sbjct: 362 LTNSSVPRGTS*PPTAQSAADSCGSSSGATGYRRSVSLMTHCR*LSPATSSMVM 201
Score = 70.7 bits (148), Expect(4) = 2e-057
Identities = 28/31 (90%), Positives = 30/31 (96%)
Frame = +2 / +1
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVL 499
+A+GRLMLPFGMGRRRCPGETLALRT GLVL
Sbjct: 460 EADGRLMLPFGMGRRRCPGETLALRTVGLVL 552
Score = 67.5 bits (141), Expect(3) = 6e-047
Identities = 28/31 (90%), Positives = 28/31 (90%)
Frame = -1 / -1
Query: 501 ASTRPAVRRASVSPGHLRRPIPNGSISRPSA 409
ASTRP VR A VSPGHLRRPIPNGSISRPSA
Sbjct: 554 ASTRPTVRSARVSPGHLRRPIPNGSISRPSA 462
Score = 65.2 bits (136), Expect(4) = 8e-028
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -3 / -3
Query: 499 EHEAGGPQSERLPGAPAPSHPERQHQPALGL 407
EHEA GPQ E LPGAPAP HPERQHQPA+ L
Sbjct: 552 EHEADGPQREGLPGAPAPPHPERQHQPAVRL 460
Score = 62.9 bits (131), Expect(3) = 2e-023
Identities = 28/54 (51%), Positives = 28/54 (51%)
Frame = +3 / +3
Query: 165 PHHHGRRAGAGLPAVRHQXXXXXXXXXXXXXXXXXXXXLHGRRLRSAPRHAAVR 326
PHHHGRR A LPAVRHQ L RRLR APRHAAVR
Sbjct: 198 PHHHGRRGRAELPAVRHQRDAAPVPGGAAAAAARVGGGLRRRRLRRAPRHAAVR 359
Score = 60.2 bits (125), Expect(4) = 2e-057
Identities = 26/39 (66%), Positives = 26/39 (66%)
Frame = +2 / +1
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
LFTAGTETTSSTIEWAMSLLLNHP VG
Sbjct: 70 LFTAGTETTSSTIEWAMSLLLNHPEALKKVEAEIEAAVG 186
Score = 46.0 bits (94), Expect(3) = 6e-047
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3 / -3
Query: 91 HGPFYRGRRRLRSGCKQV 38
HGPFYR RRRLRSGCKQV
Sbjct: 120 HGPFYRRRRRLRSGCKQV 67
Score = 45.1 bits (92), Expect(4) = 8e-028
Identities = 21/39 (53%), Positives = 21/39 (53%)
Frame = -1 / -1
Query: 156 PTXXXXXXXXXXXXXXXXXXSDMAHSIVDDVVSVPAVNK 40
PT SDMAHSIVDDVVSVPAVNK
Sbjct: 185 PTAASISASTFFSASG*FSSSDMAHSIVDDVVSVPAVNK 69
Score = 45.1 bits (92), Expect(4) = 8e-028
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1 / -3
Query: 222 LVDDALQVAQPRHVVHGDEA 163
L DDALQVAQP HVVHGDEA
Sbjct: 255 LADDALQVAQPGHVVHGDEA 196
Score = 44.1 bits (90), Expect(3) = 2e-023
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +1 / +3
Query: 34 RXLVYSRNGDDVVHDRMGHV 93
+ LVYSRNGDDVV DRMGHV
Sbjct: 63 KELVYSRNGDDVVDDRMGHV 122
Score = 41.4 bits (84), Expect(3) = 2e-023
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3 / +2
Query: 423 *CCRSGWDGAGAPGRRS 473
*CCRSGW GAGAPGR S
Sbjct: 476 *CCRSGWGGAGAPGRPS 526
Score = 30.9 bits (61), Expect(4) = 2e-057
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAW 364
+AYAIHRDPA W
Sbjct: 361 NAYAIHRDPAVW 396
Score = 24.9 bits (48), Expect(4) = 8e-028
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -1 / -3
Query: 327 DEQQRAAGH 301
DEQQRAAGH
Sbjct: 360 DEQQRAAGH 334
>gb|CD212860.1|CD212860 HS1_17_H04.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_17_H04_A012 3', mRNA sequence
Length = 540
Score = 149 bits (319), Expect(2) = 4e-054
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / +2
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 134 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 313
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 314 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 457
Score = 103 bits (220), Expect(2) = 4e-029
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / -1
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 471 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 292
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 291 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 160
Score = 84.5 bits (178), Expect(2) = 4e-054
Identities = 29/50 (58%), Positives = 41/50 (82%)
Frame = +1 / +2
Query: 178 DDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
+D+P L YL C+I+ETLRLYP AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 8 NDLPRLPYLHCIISETLRLYPAAPMLLPHEASTDCKIHGYDVPAGSMILV 157
Score = 46.0 bits (94), Expect(2) = 4e-029
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / -1
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
P GTS P +QS SCGSS GA G RRSVSLM R
Sbjct: 141 PAGTSYPWILQSVDASCGSSIGAAG*RRSVSLMMQWR 31
>gb|CW263276.1|CW263276 104_731_11230595_116_35213_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11230595, DNA
sequence
Length = 668
Score = 102 bits (218), Expect(4) = 5e-053
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +1 / +3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL++ DVP LGYLQCV+ E LRLYP PLL+PHEST DC+VGG+ VPRGT+L V
Sbjct: 66 SRLLSAADVPRLGYLQCVVTEALRLYPAVPLLVPHESTVDCSVGGHHVPRGTMLLV 233
Score = 91.8 bits (194), Expect(4) = 5e-053
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2 / +3
Query: 422 LMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTE 562
LM+PFG+GRR+CPGETLALRT GLVL TL+QCF WDR+ ++DM E
Sbjct: 351 LMIPFGLGRRKCPGETLALRTLGLVLGTLVQCFDWDRVGDDQVDMAE 491
Score = 79.0 bits (166), Expect(3) = 4e-031
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSS 177
T+S VPRGT PPT QS VDSCG+SSG GY RS S+ THCR P GTS+
Sbjct: 232 TSSIVPRGTWWPPTEQSTVDSCGTSSGTAGYSRSASVTTHCRYPRRGTSA 83
Score = 67.5 bits (141), Expect(3) = 4e-031
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -3 / -1
Query: 580 HGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQSERLPGAPAPSHPERQHQ 422
H + GHV+L D VPVEALDE +++A PQ ERL GA APS PER H+
Sbjct: 509 HEPGSPFGHVNLVVADPVPVEALDEGPQNQAQRPQRERLAGALAPSQPERDHE 351
Score = 39.1 bits (79), Expect(4) = 5e-053
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 563 SGGLTMPRAVPLEATCKPREAM 628
+ GL +PRA PLEA C+PR AM
Sbjct: 495 AAGLMLPRAAPLEAMCRPRRAM 560
Score = 32.7 bits (65), Expect(4) = 5e-053
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAW 364
+AYAIHRDPAAW
Sbjct: 234 NAYAIHRDPAAW 269
Score = 27.6 bits (54), Expect(3) = 4e-031
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / -3
Query: 635 HDAWLREACRWPPTGRPGAW*A 570
H AW AC WP P A *A
Sbjct: 567 HQAWRVAACTWPQEEPPSAA*A 502
>gb|BE360028.1|BE360028 DG1_60_C08.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 634
Score = 184 bits (396), Expect(2) = 9e-053
Identities = 74/101 (73%), Positives = 79/101 (78%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 64 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 243
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAMR 631
IQC WDR+DG EIDMT GGLTMPRAVPLEATCKPR AMR
Sbjct: 244 IQCIDWDRVDGLEIDMTAGGGLTMPRAVPLEATCKPRAAMR 366
Score = 150 bits (322), Expect(2) = 3e-041
Identities = 70/115 (60%), Positives = 77/115 (66%)
Frame = -1 / -3
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 410 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 231
Query: 495 TRPAVRRASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
T P VR ASVSPGHLRRPIPNG SRPSALP LW+AYA
Sbjct: 230 TSPTVRSASVSPGHLRRPIPNGISSRPSALPSSNRSGLNSAGSSHTAGSLWIAYA 66
Score = 146 bits (314), Expect = 3e-034
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = -3 / -2
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 387 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 208
Query: 472 ERLPGAPAPSHPERQHQPALGLAVAE 395
ERLPGA AP HPER QP LGLAV E
Sbjct: 207 ERLPGALAPPHPERHQQPPLGLAVLE 130
Score = 44.6 bits (91), Expect(2) = 9e-053
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 265 ESTADCTVGGYEVPRGTLLFV 327
ES ADC VGGY+VPRGTLL V
Sbjct: 1 ESAADCKVGGYDVPRGTLLIV 63
Score = 40.0 bits (81), Expect(2) = 3e-041
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -3
Query: 326 TNSSVPRGTS*PPTVQSAVD 267
T SSVPRGTS*PPT+QSA D
Sbjct: 62 TISSVPRGTS*PPTLQSAAD 3
>gb|BE363286.1|BE363286 WS1_61_D09.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 501
Score = 184 bits (396), Expect(2) = 9e-053
Identities = 74/101 (73%), Positives = 79/101 (78%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W GKAEGRL++PFGMGRR+CPGETLALRT GLVL TL
Sbjct: 64 NAYAIHRDPAVWEDPAEFRPERFEDGKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTL 243
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAMR 631
IQC WDR+DG EIDMT GGLTMPRAVPLEATCKPR AMR
Sbjct: 244 IQCIDWDRVDGLEIDMTAGGGLTMPRAVPLEATCKPRAAMR 366
Score = 150 bits (322), Expect(2) = 3e-041
Identities = 70/115 (60%), Positives = 77/115 (66%)
Frame = -1 / -2
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 410 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 231
Query: 495 TRPAVRRASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
T P VR ASVSPGHLRRPIPNG SRPSALP LW+AYA
Sbjct: 230 TSPTVRSASVSPGHLRRPIPNGISSRPSALPSSNRSGLNSAGSSHTAGSLWIAYA 66
Score = 146 bits (314), Expect = 3e-034
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = -3 / -1
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 387 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 208
Query: 472 ERLPGAPAPSHPERQHQPALGLAVAE 395
ERLPGA AP HPER QP LGLAV E
Sbjct: 207 ERLPGALAPPHPERHQQPPLGLAVLE 130
Score = 44.6 bits (91), Expect(2) = 9e-053
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 265 ESTADCTVGGYEVPRGTLLFV 327
ES ADC VGGY+VPRGTLL V
Sbjct: 1 ESAADCKVGGYDVPRGTLLIV 63
Score = 40.0 bits (81), Expect(2) = 3e-041
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVD 267
T SSVPRGTS*PPT+QSA D
Sbjct: 62 TISSVPRGTS*PPTLQSAAD 3
>gb|BG933110.1|BG933110 WS1_29_D01.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 507
Score = 102 bits (217), Expect(3) = 1e-051
Identities = 41/72 (56%), Positives = 47/72 (65%)
Frame = +2 / +1
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 292 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 471
Query: 485 AGLVLATLIQCF 520
GLVL L+QCF
Sbjct: 472 MGLVLXALLQCF 507
Score = 88.6 bits (187), Expect(3) = 1e-051
Identities = 31/55 (56%), Positives = 44/55 (80%)
Frame = +1 / +1
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+ +D+P L YL C+I+ETLRLYP AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 151 RLLDKNDLPRLPYLHCIISETLRLYPAAPMLLPHEASTDCKIHGYDVPAGSMILV 315
Score = 72.1 bits (151), Expect(3) = 7e-023
Identities = 32/63 (50%), Positives = 33/63 (52%)
Frame = -1 / -2
Query: 519 KHWMSVASTRPAVRRASVSPGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWM 340
KHW S T P VR A SPGHLR PIPNG I+ PSALP LWM
Sbjct: 506 KHWSSAXRTSPMVRIARFSPGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWM 327
Query: 339 AYA 331
AYA
Sbjct: 326 AYA 318
Score = 52.8 bits (109), Expect(3) = 1e-051
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +2 / +1
Query: 26 ALCGXLFTAGTETTSSTIEWAMSLLLNHP 112
AL L AGTETTS+T+EWAMSLLLNHP
Sbjct: 13 ALVPNLLGAGTETTSTTMEWAMSLLLNHP 99
Score = 46.0 bits (94), Expect(3) = 7e-023
Identities = 23/37 (62%), Positives = 24/37 (64%)
Frame = -2 / -2
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
P GTS P +QS SCGSS GA G RRSVSLM R
Sbjct: 299 PAGTSYPWILQSVDASCGSSIGAAG*RRSVSLMMQWR 189
Score = 28.1 bits (55), Expect(3) = 7e-023
Identities = 11/18 (61%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 93 DMAHSIVDDVVSVPAVNK 40
D+AHS+V +VVSVPA ++
Sbjct: 80 DIAHSMVVEVVSVPAPSR 27
>gb|CD205908.1|CD205908 HS1_19_B08.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_19_B08_A012 3', mRNA sequence
Length = 556
Score = 149 bits (319), Expect(2) = 2e-049
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / +3
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 96 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 275
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 276 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 419
Score = 103 bits (220), Expect(2) = 7e-029
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / -1
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 433 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 254
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 253 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 122
Score = 68.4 bits (143), Expect(2) = 2e-049
Identities = 23/39 (58%), Positives = 33/39 (84%)
Frame = +1 / +3
Query: 211 VINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
+I+ETLRLYP AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 3 IISETLRLYPAAPMLLPHEASTDCKIHGYDVPAGSMILV 119
Score = 45.1 bits (92), Expect(2) = 7e-029
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -2 / -1
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLM 213
P GTS P +QS SCGSS GA G RRSVSLM
Sbjct: 103 PAGTSYPWILQSVDASCGSSIGAAG*RRSVSLM 5
>gb|CL184034.1|CL184034 104_397_10898577_116_32364_047 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898577, DNA
sequence
Length = 546
Score = 93.6 bits (198), Expect(3) = 3e-047
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +2 / -2
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA + +A+HRDP W GK++G+ MLPFGMGRRRCPGE LA++
Sbjct: 350 PAGTMLLVNVHAMHRDPRVWEEPERFSPERFEGGKSDGKWMLPFGMGRRRCPGEGLAVKM 171
Query: 485 AGLVLATLIQCFHWDRIDGAE 547
GL L TL+Q F W R G E
Sbjct: 170 VGLALGTLVQGFEWRRTTGDE 108
Score = 90.4 bits (191), Expect(3) = 3e-047
Identities = 33/56 (58%), Positives = 44/56 (78%)
Frame = +1 / -2
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
+R++ D+P L YL C++ ETLRL+PVAPLL PHES + C+VGGY+VP GT+L V
Sbjct: 494 ARILEEADLPNLPYLMCIVTETLRLHPVAPLLAPHESASHCSVGGYDVPAGTMLLV 327
Score = 63.4 bits (132), Expect(3) = 4e-025
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -2 / +1
Query: 329 VTNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR 201
+T S VP GTS*PPT Q DSCG+ SGATG+RR VS+ H R
Sbjct: 325 LTRSIVPAGTS*PPTEQWEADSCGARSGATGWRRRVSVTMHMR 453
Score = 56.1 bits (116), Expect(3) = 4e-025
Identities = 25/48 (52%), Positives = 29/48 (60%)
Frame = -1 / +1
Query: 546 SAPSILSQWKHWMSVASTRPAVRRASVSPGHLRRPIPNGSISRPSALP 403
S+P +L K SV S RP + A SPGH RRP+PNGSI PS P
Sbjct: 109 SSPVVLLHSKPCTSVPSARPTIFTARPSPGHRRRPMPNGSIHFPSLFP 252
Score = 44.6 bits (91), Expect(3) = 3e-047
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +2 / -2
Query: 545 EIDMTESGGLTMPRAVPLEATCKPREAM 628
E+DMTE+ GLTMP++VPLEA PR M
Sbjct: 107 EVDMTEASGLTMPKSVPLEAFYWPRMEM 24
Score = 34.5 bits (69), Expect(3) = 4e-025
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 618 RGLQVASNGTARGMVSPPLSVMSISAPSIL 529
RG ASNGT GMVSP SVMS S+ ++
Sbjct: 34 RGQ*NASNGTDFGMVSPDASVMSTSSSPVV 123
>gb|BE357452.1|BE357452 DG1_15_A08.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 602
Score = 117 bits (251), Expect(3) = 4e-046
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRLIT +DVP LGYLQCVINETLR+YP APLLLPHES ADC VGGY+VPRGTLL V
Sbjct: 358 SRLITAEDVPRLGYLQCVINETLRMYPAAPLLLPHESAADCKVGGYDVPRGTLLIV 525
Score = 96.8 bits (205), Expect(2) = 2e-030
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -2 / -1
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMTHCR*P GTSS V+
Sbjct: 524 TISSVPRGTS*PPTLQSAADSCGRSSGAAGYMRRVSLMTHCR*PRRGTSSAVI 366
Score = 76.2 bits (160), Expect(3) = 4e-046
Identities = 33/49 (67%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
DTMIMALCG LF AGTETTSST EWAMSLLLNHP VG
Sbjct: 208 DTMIMALCGNLFGAGTETTSSTTEWAMSLLLNHPEALKKAQAEIDAVVG 354
Score = 57.4 bits (119), Expect(2) = 2e-030
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -1 / -1
Query: 156 PTXXXXXXXXXXXXXXXXXXSDMAHSIVDDVVSVPAVNKXPHSAMIMVS 10
PT SDMAHS+VDDVVSVPA NK P SAMIMVS
Sbjct: 353 PTTASISACAFFSASGWFRRSDMAHSVVDDVVSVPAPNKFPQSAMIMVS 207
Score = 30.9 bits (61), Expect(3) = 4e-046
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAW 364
+AYAIHRDPA W
Sbjct: 526 NAYAIHRDPAVW 561
>gb|BE363200.1|BE363200 WS1_61_D09.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 495
Score = 117 bits (251), Expect(3) = 4e-046
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRLIT +DVP LGYLQCVINETLR+YP APLLLPHES ADC VGGY+VPRGTLL V
Sbjct: 286 SRLITAEDVPRLGYLQCVINETLRMYPAAPLLLPHESAADCKVGGYDVPRGTLLIV 453
Score = 96.8 bits (205), Expect(2) = 2e-030
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMTHCR*P GTSS V+
Sbjct: 452 TISSVPRGTS*PPTLQSAADSCGRSSGAAGYMRRVSLMTHCR*PRRGTSSAVI 294
Score = 76.2 bits (160), Expect(3) = 4e-046
Identities = 33/49 (67%), Positives = 33/49 (67%)
Frame = +2 / +1
Query: 11 DTMIMALCGXLFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
DTMIMALCG LF AGTETTSST EWAMSLLLNHP VG
Sbjct: 136 DTMIMALCGNLFGAGTETTSSTTEWAMSLLLNHPEALKKAQAEIDAVVG 282
Score = 57.4 bits (119), Expect(2) = 2e-030
Identities = 27/49 (55%), Positives = 28/49 (57%)
Frame = -1 / -2
Query: 156 PTXXXXXXXXXXXXXXXXXXSDMAHSIVDDVVSVPAVNKXPHSAMIMVS 10
PT SDMAHS+VDDVVSVPA NK P SAMIMVS
Sbjct: 281 PTTASISACAFFSASGWFRRSDMAHSVVDDVVSVPAPNKFPQSAMIMVS 135
Score = 30.9 bits (61), Expect(3) = 4e-046
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +1
Query: 329 HAYAIHRDPAAW 364
+AYAIHRDPA W
Sbjct: 454 NAYAIHRDPAVW 489
>gb|CL161359.1|CL161359 104_352_10805664_114_31826_336 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805664, DNA
sequence
Length = 736
Score = 77.6 bits (163), Expect(5) = 2e-045
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = +1 / +3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLF 324
SRL+ D+ GL YL+CV++ETLRLYP+AP +PHE++ DC V V RGT++F
Sbjct: 234 SRLLRESDLAGLPYLRCVVSETLRLYPLAPNHVPHEASRDCVVAAAVVARGTMVF 398
Score = 68.9 bits (144), Expect(5) = 2e-045
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +2 / +3
Query: 419 RLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWD 529
R M+PFGMGRR+CPGE+LALR G+ L ++QCF W+
Sbjct: 525 RWMMPFGMGRRKCPGESLALRMVGVALGVMLQCFEWE 635
Score = 44.6 bits (91), Expect(5) = 2e-045
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = +2 / +3
Query: 545 EIDMTESGGLTMPRAVPLEATCKPR 619
E+DM+E GLTMP A PL A C+PR
Sbjct: 660 EVDMSEGSGLTMPMATPLVAVCRPR 734
Score = 41.8 bits (85), Expect(5) = 2e-045
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +2 / +3
Query: 14 TMIMALCGXLFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
T I L GT+TT+STIEWA +LLL +P VG
Sbjct: 87 TCISMHAQSLLQGGTDTTASTIEWATALLLTNPSAAKKATAEIDAVVG 230
Score = 24.9 bits (48), Expect(5) = 2e-045
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAW 364
+ Y++ RDPAAW
Sbjct: 402 YVYSMQRDPAAW 437
>gb|CB924446.1|CB924446 ABA1_21_F08.b1_A012 Abscisic acid-treated seedlings Sorghum bicolor
cDNA clone ABA1_21_F08_A012 3', mRNA sequence
Length = 623
Score = 149 bits (319), Expect(2) = 4e-044
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / +3
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 69 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 248
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 249 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 392
Score = 103 bits (220), Expect(2) = 3e-025
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / -2
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 406 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 227
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 226 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 95
Score = 51.0 bits (105), Expect(2) = 4e-044
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +1 / +3
Query: 238 PVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
P AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 3 PAAPMLLPHEASTDCKIHGYDVPAGSMILV 92
Score = 32.7 bits (65), Expect(2) = 3e-025
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATG 237
P GTS P +QS SCGSS GA G
Sbjct: 76 PAGTSYPWILQSVDASCGSSIGAAG 2
>gb|AW679544.1|AW679544 WS1_29_D01.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 149 bits (319), Expect(2) = 4e-044
Identities = 61/108 (56%), Positives = 70/108 (64%)
Frame = +2 / +2
Query: 305 PAARCCSSHAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRT 484
PA +AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT
Sbjct: 68 PAGSMILVNAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRT 247
Query: 485 AGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
GLVL L+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 248 MGLVLGALLQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 391
Score = 103 bits (220), Expect(2) = 4e-025
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / -2
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 405 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 226
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 225 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 94
Score = 51.0 bits (105), Expect(2) = 4e-044
Identities = 16/30 (53%), Positives = 24/30 (80%)
Frame = +1 / +2
Query: 238 PVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
P AP+LLPHE++ DC + GY+VP G+++ V
Sbjct: 2 PAAPMLLPHEASTDCKIHGYDVPAGSMILV 91
Score = 32.7 bits (65), Expect(2) = 4e-025
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -2 / -2
Query: 311 PRGTS*PPTVQSAVDSCGSSSGATG 237
P GTS P +QS SCGSS GA G
Sbjct: 75 PAGTSYPWILQSVDASCGSSIGAAG 1
>gb|CW256586.1|CW256586 104_721_11226871_116_35138_020 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226871, DNA
sequence
Length = 535
Score = 91.8 bits (194), Expect(4) = 1e-043
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2 / -3
Query: 422 LMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTE 562
LM+PFG+GRR+CPGETLALRT GLVL TL+QCF WDR+ ++DM E
Sbjct: 305 LMIPFGLGRRKCPGETLALRTLGLVLGTLVQCFDWDRVGDDQVDMAE 165
Score = 70.7 bits (148), Expect(4) = 1e-043
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +1 / -3
Query: 220 ETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
E LRLYP PLL+PHEST DC+VGG+ VPRGT+L V
Sbjct: 530 EALRLYPAVPLLVPHESTVDCSVGGHHVPRGTMLLV 423
Score = 67.5 bits (141), Expect(3) = 2e-025
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -3 / +3
Query: 580 HGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQSERLPGAPAPSHPERQHQ 422
H + GHV+L D VPVEALDE +++A PQ ERL GA APS PER H+
Sbjct: 147 HEPGSPFGHVNLVVADPVPVEALDEGPQNQAQRPQRERLAGALAPSQPERDHE 305
Score = 59.7 bits (124), Expect(3) = 2e-025
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = -2 / +1
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSL 216
T+S VPRGT PPT QS VDSCG+SSG GY RS S+
Sbjct: 424 TSSIVPRGTWWPPTEQSTVDSCGTSSGTAGYSRSASV 534
Score = 39.1 bits (79), Expect(4) = 1e-043
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / -3
Query: 563 SGGLTMPRAVPLEATCKPREAM 628
+ GL +PRA PLEA C+PR AM
Sbjct: 161 AAGLMLPRAAPLEAMCRPRRAM 96
Score = 32.7 bits (65), Expect(4) = 1e-043
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / -3
Query: 329 HAYAIHRDPAAW 364
+AYAIHRDPAAW
Sbjct: 422 NAYAIHRDPAAW 387
Score = 27.6 bits (54), Expect(3) = 2e-025
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / +2
Query: 635 HDAWLREACRWPPTGRPGAW*A 570
H AW AC WP P A *A
Sbjct: 89 HQAWRVAACTWPQEEPPSAA*A 154
>gb|CF430593.1|CF430593 NIT1_3_A05.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_3_A05_A002 3', mRNA sequence
Length = 531
Score = 91.8 bits (194), Expect(4) = 6e-043
Identities = 33/47 (70%), Positives = 40/47 (85%)
Frame = +2 / +3
Query: 422 LMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTE 562
LM+PFG+GRR+CPGETLALRT GLVL TL+QCF WDR+ ++DM E
Sbjct: 225 LMIPFGLGRRKCPGETLALRTLGLVLGTLVQCFDWDRVGDDQVDMAE 365
Score = 68.4 bits (143), Expect(4) = 6e-043
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +1 / +3
Query: 226 LRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
LRLYP PLL+PHEST DC+VGG+ VPRGT+L V
Sbjct: 6 LRLYPAVPLLVPHESTVDCSVGGHHVPRGTMLLV 107
Score = 67.5 bits (141), Expect(3) = 9e-025
Identities = 29/53 (54%), Positives = 35/53 (66%)
Frame = -3 / -2
Query: 580 HGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQSERLPGAPAPSHPERQHQ 422
H + GHV+L D VPVEALDE +++A PQ ERL GA APS PER H+
Sbjct: 383 HEPGSPFGHVNLVVADPVPVEALDEGPQNQAQRPQRERLAGALAPSQPERDHE 225
Score = 57.4 bits (119), Expect(3) = 9e-025
Identities = 24/34 (70%), Positives = 26/34 (76%)
Frame = -2 / -3
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRS 225
T+S VPRGT PPT QS VDSCG+SSG GY RS
Sbjct: 106 TSSIVPRGTWWPPTEQSTVDSCGTSSGTAGYSRS 5
Score = 39.1 bits (79), Expect(4) = 6e-043
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +2 / +3
Query: 563 SGGLTMPRAVPLEATCKPREAM 628
+ GL +PRA PLEA C+PR AM
Sbjct: 369 AAGLMLPRAAPLEAMCRPRRAM 434
Score = 32.7 bits (65), Expect(4) = 6e-043
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAW 364
+AYAIHRDPAAW
Sbjct: 108 NAYAIHRDPAAW 143
Score = 27.6 bits (54), Expect(3) = 9e-025
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / -1
Query: 635 HDAWLREACRWPPTGRPGAW*A 570
H AW AC WP P A *A
Sbjct: 441 HQAWRVAACTWPQEEPPSAA*A 376
>gb|CL161360.1|CL161360 104_352_10805664_116_31827_336 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10805664, DNA
sequence
Length = 709
Score = 75.8 bits (159), Expect(5) = 2e-039
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1 / -1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SR++ D+ GL YL+CV++ETLRLYP+AP +PHE++ DC V V RGT++ V
Sbjct: 628 SRMLRESDLAGLPYLRCVVSETLRLYPLAPNHVPHEASRDCVVAAAVVARGTMVLV 461
Score = 68.9 bits (144), Expect(5) = 2e-039
Identities = 23/37 (62%), Positives = 30/37 (81%)
Frame = +2 / -1
Query: 419 RLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWD 529
R M+PFGMGRR+CPGE+LALR G+ L ++QCF W+
Sbjct: 337 RWMMPFGMGRRKCPGESLALRMVGVALGVMLQCFEWE 227
Score = 46.0 bits (94), Expect(5) = 2e-039
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 545 EIDMTESGGLTMPRAVPLEATCKPREAM 628
E+DM+E GLTMP A PL A C+PR M
Sbjct: 202 EVDMSEGSGLTMPMATPLVAVCRPRAKM 119
Score = 24.0 bits (46), Expect(5) = 2e-039
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 335 YAIHRDPAAW 364
Y++ RDPAAW
Sbjct: 454 YSMQRDPAAW 425
Score = 23.1 bits (44), Expect(5) = 2e-039
Identities = 9/26 (34%), Positives = 11/26 (42%)
Frame = +2 / -1
Query: 80 EWAMSLLLNHPXXXXXXXXXXXXXVG 157
EWA +LLL +P VG
Sbjct: 709 EWATALLLTNPSAAKKATAEIDAVVG 632
>gb|AW922538.1|AW922538 DG1_20_D10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 430
Score = 162 bits (349), Expect = 5e-039
Identities = 64/76 (84%), Positives = 68/76 (89%)
Frame = +2 / +3
Query: 404 GKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMP 583
GKAEGRL++PFGMGRR+CPGETLALRT GLVL TLIQC WDR+DG EIDMT GGLTMP
Sbjct: 30 GKAEGRLLMPFGMGRRKCPGETLALRTVGLVLGTLIQCIDWDRVDGLEIDMTAGGGLTMP 209
Query: 584 RAVPLEATCKPREAMR 631
RAVPLEATCKPR AMR
Sbjct: 210 RAVPLEATCKPRAAMR 257
Score = 146 bits (314), Expect = 3e-034
Identities = 60/86 (69%), Positives = 67/86 (77%)
Frame = -3 / -3
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 278 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 99
Query: 472 ERLPGAPAPSHPERQHQPALGLAVAE 395
ERLPGA AP HPER QP LGLAV E
Sbjct: 98 ERLPGALAPPHPERHQQPPLGLAVLE 21
Score = 142 bits (304), Expect = 8e-033
Identities = 65/91 (71%), Positives = 71/91 (78%)
Frame = -1 / -1
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 301 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 122
Query: 495 TRPAVRRASVSPGHLRRPIPNGSISRPSALP 403
T P VR ASVSPGHLRRPIPNG SRPSALP
Sbjct: 121 TSPTVRSASVSPGHLRRPIPNGISSRPSALP 29
>gb|CW393838.1|CW393838 fsbb001f081b07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f081b07, DNA
sequence
Length = 634
Score = 117 bits (251), Expect(3) = 2e-038
Identities = 47/56 (83%), Positives = 50/56 (89%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRLIT +DVP LGYLQCVINETLR+YP APLLLPHES ADC VGGY+VPRGTLL V
Sbjct: 463 SRLITAEDVPRLGYLQCVINETLRMYPAAPLLLPHESAADCKVGGYDVPRGTLLIV 630
Score = 96.8 bits (205), Expect(3) = 3e-026
Identities = 42/53 (79%), Positives = 44/53 (83%)
Frame = -2 / -3
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMVM 168
T SSVPRGTS*PPT+QSA DSCG SSGA GY R VSLMTHCR*P GTSS V+
Sbjct: 629 TISSVPRGTS*PPTLQSAADSCGRSSGAAGYMRRVSLMTHCR*PRRGTSSAVI 471
Score = 54.7 bits (113), Expect(3) = 2e-038
Identities = 24/39 (61%), Positives = 24/39 (61%)
Frame = +2 / +1
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
LF AGTETTSST EWAMSLLLNHP VG
Sbjct: 343 LFGAGTETTSSTTEWAMSLLLNHPEALKKAQAEIDAVVG 459
Score = 34.5 bits (69), Expect(3) = 3e-026
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -2 / -1
Query: 92 TWPILSWTTSSPFR 51
TWPILSWT SPFR
Sbjct: 394 TWPILSWTMWSPFR 353
Score = 29.5 bits (58), Expect(3) = 3e-026
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3 / -1
Query: 67 RRLRSGCKQVPAQCHDHGV 11
R +G K PA+CHDHG+
Sbjct: 109 REESTGRKTHPAKCHDHGI 53
Score = 29.5 bits (58), Expect(3) = 2e-038
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = +2 / +2
Query: 11 DTMIMALCGXLFTAGT 58
DTMIMALCG F++ T
Sbjct: 53 DTMIMALCGVSFSSST 100
>gb|CW485262.1|CW485262 fsbb001f247o06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f247o06, DNA
sequence
Length = 626
Score = 79.9 bits (168), Expect(4) = 1e-037
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +1 / -2
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+ D+ L YLQCV+ ETLRL PV P++ HE+ DCTVGG+ V RGT++ V
Sbjct: 613 SRLVEESDMANLPYLQCVVKETLRLCPVGPVIPAHEAMEDCTVGGFHVRRGTMILV 446
Score = 68.0 bits (142), Expect(4) = 1e-037
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +2 / -2
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWD 529
+LPFG+GRRRCPGE LA+R L LA L+QCF WD
Sbjct: 340 LLPFGLGRRRCPGEGLAMRLVSLTLAALVQCFDWD 236
Score = 40.0 bits (81), Expect(4) = 1e-037
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2 / -2
Query: 539 GAEIDMTESGGLTMPRAVPLEATCKPRE 622
G DM E GL+MP A PL A C+PRE
Sbjct: 223 GGAPDMAEGVGLSMPMAKPLAAVCRPRE 140
Score = 25.8 bits (50), Expect(4) = 1e-037
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 329 HAYAIHRDPAAW 364
+A+AIHRDP W
Sbjct: 445 NAWAIHRDPKLW 410
>gb|CW255081.1|CW255081 104_719_11226032_116_35125_024 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226032, DNA
sequence
Length = 597
Score = 79.9 bits (168), Expect(4) = 3e-037
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +1 / -1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+ D+ L YLQCV+ ETLRL PV P++ HE+ DCTVGG+ V RGT++ V
Sbjct: 453 SRLVEESDMANLPYLQCVVKETLRLCPVGPVIPAHEAMEDCTVGGFHVRRGTMILV 286
Score = 68.0 bits (142), Expect(4) = 3e-037
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +2 / -1
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWD 529
+LPFG+GRRRCPGE LA+R L LA L+QCF WD
Sbjct: 180 LLPFGLGRRRCPGEGLAMRLVSLTLAALVQCFDWD 76
Score = 39.1 bits (79), Expect(4) = 3e-037
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2 / -1
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
L +AGT+T++ T EWAM+ LL HP VG
Sbjct: 573 LLSAGTDTSALTTEWAMAQLLTHPEAMRKLTAELDTNVG 457
Score = 25.8 bits (50), Expect(4) = 3e-037
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 329 HAYAIHRDPAAW 364
+A+AIHRDP W
Sbjct: 285 NAWAIHRDPKLW 250
>gb|AW922289.1|AW922289 DG1_17_H09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 535
Score = 153 bits (329), Expect = 3e-036
Identities = 60/72 (83%), Positives = 64/72 (88%)
Frame = +2 / +3
Query: 416 GRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVP 595
GRL++PFGMGRR+CPGETLALRT GLVL TLIQC WDR+DG EIDMT GGLTMPRAVP
Sbjct: 3 GRLLMPFGMGRRKCPGETLALRTVGLVLGTLIQCIDWDRVDGLEIDMTAGGGLTMPRAVP 182
Query: 596 LEATCKPREAMR 631
LEATCKPR AMR
Sbjct: 183 LEATCKPRAAMR 218
Score = 135 bits (289), Expect = 1e-030
Identities = 54/78 (69%), Positives = 61/78 (78%)
Frame = -3 / -3
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 239 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 60
Query: 472 ERLPGAPAPSHPERQHQP 419
ERLPGA AP HPER QP
Sbjct: 59 ERLPGALAPPHPERHQQP 6
Score = 133 bits (285), Expect = 3e-030
Identities = 61/87 (70%), Positives = 67/87 (77%)
Frame = -1 / -1
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 262 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 83
Query: 495 TRPAVRRASVSPGHLRRPIPNGSISRP 415
T P VR ASVSPGHLRRPIPNG SRP
Sbjct: 82 TSPTVRSASVSPGHLRRPIPNGISSRP 2
>gb|CW485263.1|CW485263 fsbb001f247o06k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f247o06, DNA
sequence
Length = 558
Score = 74.8 bits (157), Expect(4) = 9e-035
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1 / +3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+ D+ L YLQ V+ ETLRL PV P++ HE+ DCTVGG+ V RGT++ V
Sbjct: 171 SRLVEESDMANLPYLQWVVKETLRLCPVGPVIPAHEAMEDCTVGGFHVRRGTMILV 338
Score = 64.8 bits (135), Expect(4) = 9e-035
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +2 / +3
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWD 529
++PFG+GRRRCPGE L +R L LA L+QCF WD
Sbjct: 444 LVPFGLGRRRCPGEGLGMRLVSLTLAALVQCFDWD 548
Score = 38.6 bits (78), Expect(4) = 9e-035
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 41 LFTAGTETTSSTIEWAMSLLLNHP 112
L +AGT+T++ T EWAM+ LL HP
Sbjct: 51 LLSAGTDTSALTTEWAMAQLLTHP 122
Score = 25.8 bits (50), Expect(4) = 9e-035
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAW 364
+A+AIHRDP W
Sbjct: 339 NAWAIHRDPKLW 374
>gb|CW246873.1|CW246873 104_707_11221518_148_35089_019 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221518, DNA
sequence
Length = 694
Score = 105 bits (225), Expect(3) = 2e-034
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +2 / -2
Query: 428 LPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEAT 607
L FGMGRRRCP E L ++ AG+ L T+IQCF+W+R+ +DM E GLTM + VPLEA
Sbjct: 360 LSFGMGRRRCPAENLGMQLAGIALGTMIQCFNWERVGTELVDMAEGSGLTMAKKVPLEAF 181
Query: 608 CKPREAMRH 634
C+PR +M H
Sbjct: 180 CRPRASMLH 154
Score = 55.6 bits (115), Expect(3) = 2e-034
Identities = 19/32 (59%), Positives = 25/32 (78%)
Frame = +1 / -2
Query: 232 LYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
LYPV PLL+P ES+ DC V G+ +P+GT+L V
Sbjct: 693 LYPVVPLLIPRESSTDCMVSGFHIPKGTMLVV 598
Score = 27.2 bits (53), Expect(3) = 2e-034
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 329 HAYAIHRDPAAW 364
+A+AIHRDP W
Sbjct: 597 NAFAIHRDPGTW 562
>gb|CF770824.1|CF770824 DSBF1_10_B04.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_10_B04_A010 3', mRNA sequence
Length = 576
Score = 147 bits (315), Expect = 3e-034
Identities = 59/100 (59%), Positives = 68/100 (68%)
Frame = +2 / +3
Query: 329 HAYAIHRDPAAWXXXXXXXXXXXXXGKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATL 508
+AYAIHRDPA W G+AEG+ M+PFGMGRRRCPGE LA+RT GLVL L
Sbjct: 3 NAYAIHRDPATWEDPEEFRPERFEHGRAEGKFMMPFGMGRRRCPGENLAMRTMGLVLGAL 182
Query: 509 IQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPREAM 628
+QCF W RI AE+DM + G M +AVPLEA CKPR M
Sbjct: 183 LQCFDWTRIGDAEVDMATATGTIMSKAVPLEALCKPRANM 302
Score = 103 bits (220), Expect = 3e-021
Identities = 53/104 (50%), Positives = 57/104 (54%)
Frame = -1 / -3
Query: 642 *RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVS 463
*RT M +RGL AS+GTA M+ P MS SA IL Q KHW S T P VR A S
Sbjct: 316 *RTADMFARGLHRASSGTALDMMVPVAVAMSTSASPILVQSKHWSSAPRTSPMVRIARFS 137
Query: 462 PGHLRRPIPNGSISRPSALPXXXXXXXXXXXXXXXXXXLWMAYA 331
PGHLR PIPNG I+ PSALP LWMAYA
Sbjct: 136 PGHLRLPIPNGIINFPSALPCSNLSGLNSSGSSHVAGSLWMAYA 5
>gb|CW253791.1|CW253791 104_717_11225292_148_35107_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225292, DNA
sequence
Length = 660
Score = 139 bits (299), Expect(2) = 3e-034
Identities = 53/75 (70%), Positives = 62/75 (82%)
Frame = +2 / -3
Query: 404 GKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMP 583
G+A+G M+PFGMGRR+CPGE LALRT GLVL TLIQCF W+ + GAE+DM E G+T+P
Sbjct: 580 GRAQGLFMMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWETVGGAEVDMAEGVGITLP 401
Query: 584 RAVPLEATCKPREAM 628
RAVPLEA CKPR AM
Sbjct: 400 RAVPLEAICKPRHAM 356
Score = 105 bits (224), Expect = 9e-022
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = -1 / +3
Query: 639 RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVSP 460
RT +A RGLQ+AS GTA G V P S MS SAP +SQ KHW++V T P+VR A SP
Sbjct: 345 RTSSIAWRGLQMASRGTALGSVMPTPSAMSTSAPPTVSQSKHWINVPRTSPSVRSARASP 524
Query: 459 GHLRRPIPNGSISRPSALP 403
GHLRRPIPNG ++ P A P
Sbjct: 525 GHLRRPIPNGIMNSPWARP 581
Score = 103 bits (220), Expect = 3e-021
Identities = 44/84 (52%), Positives = 55/84 (65%)
Frame = -3 / +2
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
S+ L+++ H ARLA GL+RD P + GHVDL A D +PVEALD+R + + PQ
Sbjct: 332 SQSLEDLKHSMARLADGLERDSPRERDADPFGHVDLGAADGLPVEALDQRAQDQPQRPQR 511
Query: 472 ERLPGAPAPSHPERQHQPALGLAV 401
E L GA APSHPER H+ LG AV
Sbjct: 512 EGLSGALAPSHPERHHEQPLGSAV 583
Score = 27.2 bits (53), Expect(2) = 3e-034
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 329 HAYAIHRDPAAW 364
+ +AIHRDPA W
Sbjct: 658 NVFAIHRDPATW 623
>gb|CW193503.1|CW193503 104_616_11179600_116_36780_058 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11179600, DNA
sequence
Length = 650
Score = 109 bits (233), Expect(2) = 7e-034
Identities = 43/56 (76%), Positives = 49/56 (87%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+T DDV L YLQC+INETLRL+P APLLLPHES+ADC VGGY+VPRGT+L V
Sbjct: 448 SRLVTADDVSRLTYLQCIINETLRLHPAAPLLLPHESSADCKVGGYDVPRGTMLLV 615
Score = 87.7 bits (185), Expect(2) = 2e-021
Identities = 40/52 (76%), Positives = 42/52 (80%)
Frame = -2 / -1
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSGATGYRRSVSLMTHCR*PSPGTSSMV 171
T+S VPRGTS*PPT+QSA DSCGSSSGA G RRSVSLM HCR* TSS V
Sbjct: 614 TSSIVPRGTS*PPTLQSAEDSCGSSSGAAGCRRSVSLMMHCR*VRRDTSSAV 459
Score = 56.1 bits (116), Expect(2) = 7e-034
Identities = 25/47 (53%), Positives = 27/47 (57%)
Frame = +2 / +1
Query: 17 MIMALCGXLFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
+I A LF AGTETTS+T EWAMSLLLNHP VG
Sbjct: 304 LIFAAMKNLFLAGTETTSTTTEWAMSLLLNHPEVLKKAQAEIDAAVG 444
Score = 36.3 bits (73), Expect(2) = 2e-021
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -1 / -1
Query: 156 PTXXXXXXXXXXXXXXXXXXSDMAHSIVDDVVSVPAVNK 40
PT SDMAHS+V DVVSVPA NK
Sbjct: 443 PTAASISACAFLRTSGWFSRSDMAHSVVVDVVSVPARNK 327
>gb|CW428466.1|CW428466 fsbb001f141c22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f141c22, DNA
sequence
Length = 582
Score = 105 bits (225), Expect(3) = 9e-034
Identities = 41/67 (61%), Positives = 47/67 (70%)
Frame = +2 / +3
Query: 404 GKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMP 583
GKAEG M P GMGRR+CP R G +LIQCFHW R+DG E+DM+E GLTMP
Sbjct: 381 GKAEGLFMAPLGMGRRKCPERRSRCRRLGWRWGSLIQCFHWSRVDGVEVDMSEGSGLTMP 560
Query: 584 RAVPLEA 604
+AVPLEA
Sbjct: 561 KAVPLEA 581
Score = 86.3 bits (182), Expect(3) = 2e-026
Identities = 37/67 (55%), Positives = 44/67 (65%)
Frame = -1 / -3
Query: 603 ASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVSPGHLRRPIPNGSI 424
AS+GTA GMVSP S+MS S PS L QWKHW+ P + GHLRRPIPNG++
Sbjct: 580 ASSGTALGMVSPLPSLMSTSTPSTLLQWKHWIRDPQRHPNRLQRERLSGHLRRPIPNGAM 401
Query: 423 SRPSALP 403
+ PSA P
Sbjct: 400 NSPSAFP 380
Score = 50.6 bits (104), Expect(3) = 9e-034
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +1 / +1
Query: 244 APLLLPHESTADCTVGGYEVPRGTLLFV 327
+P L HES+ADC VGGY+VPRGT L V
Sbjct: 223 SPSLFQHESSADCKVGGYDVPRGTALLV 306
Score = 47.3 bits (97), Expect(3) = 2e-026
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -2 / -2
Query: 326 TNSSVPRGTS*PPTVQSAVDSCGSSSG 246
T+S+VPRGTS*PPT+QSA DSC + G
Sbjct: 305 TSSAVPRGTS*PPTLQSADDSCWNKDG 225
Score = 29.5 bits (58), Expect(3) = 9e-034
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +1 / +3
Query: 214 INETLRLYPVAPLL 255
I ETLRLYP APLL
Sbjct: 54 IAETLRLYPAAPLL 95
Score = 27.2 bits (53), Expect(3) = 2e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -3
Query: 254 SSGATGYRRSVSLM 213
S GA GYRRSVS M
Sbjct: 94 SKGAAGYRRSVSAM 53
>gb|CW034873.1|CW034873 104_265_10502820_114_30378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502820, DNA
sequence
Length = 635
Score = 139 bits (299), Expect(2) = 2e-033
Identities = 53/75 (70%), Positives = 62/75 (82%)
Frame = +2 / -1
Query: 404 GKAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMP 583
G+A+G M+PFGMGRR+CPGE LALRT GLVL TLIQCF W+ + GAE+DM E G+T+P
Sbjct: 530 GRAQGLFMMPFGMGRRKCPGEALALRTLGLVLGTLIQCFDWETVGGAEVDMAEGVGITLP 351
Query: 584 RAVPLEATCKPREAM 628
RAVPLEA CKPR AM
Sbjct: 350 RAVPLEAICKPRHAM 306
Score = 105 bits (224), Expect = 9e-022
Identities = 47/79 (59%), Positives = 55/79 (69%)
Frame = -1 / +1
Query: 639 RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVASTRPAVRRASVSP 460
RT +A RGLQ+AS GTA G V P S MS SAP +SQ KHW++V T P+VR A SP
Sbjct: 295 RTSSIAWRGLQMASRGTALGSVMPTPSAMSTSAPPTVSQSKHWINVPRTSPSVRSARASP 474
Query: 459 GHLRRPIPNGSISRPSALP 403
GHLRRPIPNG ++ P A P
Sbjct: 475 GHLRRPIPNGIMNSPWARP 531
Score = 24.0 bits (46), Expect(2) = 2e-033
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 329 HAYAIHRDPA 358
+ YAIHRDPA
Sbjct: 608 NVYAIHRDPA 579
>gb|CW483941.1|CW483941 fsbb001f245n05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f245n05, DNA
sequence
Length = 808
Score = 85.4 bits (180), Expect(4) = 4e-032
Identities = 34/65 (52%), Positives = 41/65 (63%)
Frame = +2 / -3
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEA 604
+LPFG GRR CPG +LA+ LA L+QCF W + GA +DM E GLT+PR PL
Sbjct: 248 LLPFGSGRRICPGASLAMLVVQAALAALVQCFEWAPVGGAPVDMEEGPGLTLPRKRPLVC 69
Query: 605 TCKPR 619
T K R
Sbjct: 68 TVKAR 54
Score = 43.2 bits (88), Expect(4) = 4e-032
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1 / -3
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLL 258
SRL D+P L YLQ + ETLRL+P PL++
Sbjct: 545 SRLADESDIPRLPYLQAIAKETLRLHPTGPLVV 447
Score = 41.8 bits (85), Expect(4) = 4e-032
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2 / -3
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
+F AGT+TT+ T+EWA+S L+N+P VG
Sbjct: 665 IFAAGTDTTTITLEWALSELINNPAVLRRAQAEVDAVVG 549
Score = 29.0 bits (57), Expect(4) = 4e-032
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1 / -3
Query: 253 LLPHESTADCTVGGYEVPRGTLLFV 327
L+ S C V GY+VP G +FV
Sbjct: 455 LVVRRSMEPCKVSGYDVPAGATVFV 381
>gb|CW253790.1|CW253790 104_717_11225292_116_35111_038 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11225292, DNA
sequence
Length = 634
Score = 107 bits (228), Expect(3) = 4e-032
Identities = 41/56 (73%), Positives = 47/56 (83%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+ DDVP LGYLQC++ ETLRLYPV P L+PHESTADCTVGG+ VP GT+L V
Sbjct: 433 SRLLGADDVPRLGYLQCIVTETLRLYPVVPTLVPHESTADCTVGGHHVPSGTMLLV 600
Score = 46.0 bits (94), Expect(3) = 4e-032
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
+F G+ETT++T EWAMSLLL+HP VG
Sbjct: 313 MFAGGSETTATTAEWAMSLLLSHPDVLKKAQAEIDASVG 429
Score = 24.4 bits (47), Expect(3) = 4e-032
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +2 / +1
Query: 305 PAARCCSSHAYAIHRDPA 358
P+ + YAIHRDPA
Sbjct: 577 PSGTMLLVNVYAIHRDPA 630
>gb|CW296832.1|CW296832 104_778_11461724_116_35631_068 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11461724, DNA
sequence
Length = 706
Score = 72.5 bits (152), Expect(5) = 4e-032
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +1 / +2
Query: 163 RLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
RL+T D+ L Y++ ++ ET+RL+PV PLL P D + G Y++PRGTL+FV
Sbjct: 161 RLVTEQDIRSLPYVEAIVKETMRLHPVTPLLAPRLCREDASTGSYDIPRGTLVFV 325
Score = 49.6 bits (102), Expect(5) = 4e-032
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +2 / +2
Query: 407 KAEGRLMLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDG 541
K + +LPFG GRR CPG L L+ + LA L+ F W DG
Sbjct: 419 KGQDLELLPFGSGRRMCPGYVLGLKMVQVTLANLLHAFAWRLPDG 553
Score = 34.1 bits (68), Expect(5) = 4e-032
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +2 / +2
Query: 527 DRIDGAEIDMTESGGLTMPRAVPLEATCKPR 619
D + ++ M E GL +PR VPLEA PR
Sbjct: 548 DGVAPEKLSMQEKFGLAVPRVVPLEAVAVPR 640
Score = 33.6 bits (67), Expect(5) = 4e-032
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2 / +2
Query: 41 LFTAGTETTSSTIEWAMSLLLNHP 112
L GT++++ TIEWAMS LL P
Sbjct: 38 LIAGGTDSSAVTIEWAMSELLRKP 109
Score = 22.1 bits (42), Expect(5) = 4e-032
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = +2 / +2
Query: 329 HAYAIHRDPAAW 364
+ +AI RDPA W
Sbjct: 326 NVWAIGRDPAVW 361
>gb|CW229839.1|CW229839 104_671_11207529_148_37263_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207529, DNA
sequence
Length = 614
Score = 81.7 bits (172), Expect(4) = 2e-031
Identities = 32/61 (52%), Positives = 39/61 (63%)
Frame = +2 / +1
Query: 425 MLPFGMGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEA 604
+LPFG GRR CPG +LA+ LA L+QCF W + GA +DM E GLT+PR PL
Sbjct: 430 LLPFGSGRRICPGASLAMLVVQAALAALVQCFEWAPVGGAPVDMEEGPGLTLPRKRPLVC 609
Query: 605 T 607
T
Sbjct: 610 T 612
Score = 43.2 bits (88), Expect(4) = 2e-031
Identities = 17/33 (51%), Positives = 22/33 (66%)
Frame = +1 / +1
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLL 258
SRL D+P L YLQ + ETLRL+P PL++
Sbjct: 133 SRLADESDIPRLPYLQAIAKETLRLHPTGPLVV 231
Score = 41.8 bits (85), Expect(4) = 2e-031
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
+F AGT+TT+ T+EWA+S L+N+P VG
Sbjct: 13 IFAAGTDTTTITLEWALSELINNPAVLRRAQAEVDAVVG 129
Score = 29.0 bits (57), Expect(4) = 2e-031
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1 / +1
Query: 253 LLPHESTADCTVGGYEVPRGTLLFV 327
L+ S C V GY+VP G +FV
Sbjct: 223 LVVRRSMEPCKVSGYDVPAGATVFV 297
>gb|BG464902.1|BG464902 EM1_35_G06.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 293
Score = 136 bits (291), Expect = 5e-031
Identities = 54/64 (84%), Positives = 56/64 (87%)
Frame = +2 / +1
Query: 440 MGRRRCPGETLALRTAGLVLATLIQCFHWDRIDGAEIDMTESGGLTMPRAVPLEATCKPR 619
MGRR+CPGETLALRT GLVL TLIQC WDR+DG EIDMT GGLTMPRAVPLEATCKPR
Sbjct: 1 MGRRKCPGETLALRTVGLVLGTLIQCIDWDRVDGLEIDMTAGGGLTMPRAVPLEATCKPR 180
Query: 620 EAMR 631
AMR
Sbjct: 181 AAMR 192
Score = 122 bits (260), Expect = 1e-026
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = -3 / -3
Query: 652 SELLKNMTHGFARLAGGLQRDGPGHGEPAALGHVDLSAIDSVPVEALDERGEHEAGGPQS 473
SEL +N+ H RLA GLQRDGPGHG+PA GHV+L AIDSVPV+ALD+R EH+ GPQ
Sbjct: 213 SELHQNIAHSCTRLARGLQRDGPGHGQPATRGHVNLQAIDSVPVDALDQRAEHQPDGPQR 34
Query: 472 ERLPGAPAPSH 440
ERLPGA AP H
Sbjct: 33 ERLPGALAPPH 1
Score = 117 bits (250), Expect = 2e-025
Identities = 54/78 (69%), Positives = 60/78 (76%)
Frame = -1 / -1
Query: 675 RMFST*TNQSC*RT*RMASRGLQVASNGTARGMVSPPLSVMSISAPSILSQWKHWMSVAS 496
R +S+ QS RT R+A+RGL VASNGTA GMVSPP +VMSIS PS LSQ HW+SV S
Sbjct: 236 RCYSSSEAQSSIRTSRIAARGLHVASNGTALGMVSPPPAVMSISRPSTLSQSMHWISVPS 57
Query: 495 TRPAVRRASVSPGHLRRP 442
T P VR ASVSPGHLRRP
Sbjct: 56 TSPTVRSASVSPGHLRRP 3
>gb|CW491815.1|CW491815 fsbb001f281n13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f281n13, DNA
sequence
Length = 738
Score = 79.9 bits (168), Expect(4) = 2e-030
Identities = 31/56 (55%), Positives = 40/56 (71%)
Frame = +1 / +2
Query: 160 SRLITMDDVPGLGYLQCVINETLRLYPVAPLLLPHESTADCTVGGYEVPRGTLLFV 327
SRL+ D+ L YLQCV+ ETLRL PV P++ HE+ DCTVGG+ V RGT++ V
Sbjct: 392 SRLVEESDMANLPYLQCVVKETLRLCPVGPVIPAHEAMEDCTVGGFHVRRGTMILV 559
Score = 44.6 bits (91), Expect(4) = 2e-030
Identities = 16/23 (69%), Positives = 19/23 (82%)
Frame = +2 / +2
Query: 425 MLPFGMGRRRCPGETLALRTAGL 493
+LPFG+GRRRCPGE LA+R L
Sbjct: 665 LLPFGLGRRRCPGEGLAMRLVSL 733
Score = 39.1 bits (79), Expect(4) = 2e-030
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2 / +2
Query: 41 LFTAGTETTSSTIEWAMSLLLNHPXXXXXXXXXXXXXVG 157
L +AGT+T++ T EWAM+ LL HP VG
Sbjct: 272 LLSAGTDTSALTTEWAMAQLLTHPEAMRKLTAELDTNVG 388
Score = 25.8 bits (50), Expect(4) = 2e-030
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +2 / +2
Query: 329 HAYAIHRDPAAW 364
+A+AIHRDP W
Sbjct: 560 NAWAIHRDPKLW 595
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 873,593,022
Number of Sequences: 832831
Number of extensions: 11380958
Number of successful extensions: 156494
Number of sequences better than 1.0e-020: 129
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 26495451086
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)