TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2521556.2.1
(1267 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD219557.1|CD219557 CCC1_57_E04.g1_A007 Callus culture/c... 386 e-106
gb|CD229233.1|CD229233 CCC1_13_F08.g1_A007 Callus culture/c... 373 e-102
gb|CW323788.1|CW323788 104_818_11476816_148_35907_062 Sorgh... 254 2e-066
gb|CW500124.1|CW500124 fsbb001f295e09k0 Sorghum methylation... 254 2e-066
gb|BZ345790.1|BZ345790 ht57a10.b1 WGS-SbicolorF (JM107 adap... 246 7e-064
gb|CD430586.1|CD430586 ETH1_19_E05.g1_A002 Ethylene-treated... 171 4e-046
gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkal... 111 3e-040
gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stres... 111 3e-040
gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated ... 111 3e-040
gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorgh... 137 5e-038
gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorgh... 114 1e-036
gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorgh... 113 1e-035
gb|CW500123.1|CW500123 fsbb001f295e09f0 Sorghum methylation... 113 1e-035
gb|CD219536.1|CD219536 CCC1_57_E04.b1_A007 Callus culture/c... 113 8e-035
gb|CD428786.1|CD428786 ETH1_36_H03.b1_A002 Ethylene-treated... 111 1e-034
gb|CN130505.1|CN130505 RHOH1_42_A05.b1_A002 Acid- and alkal... 116 1e-034
gb|CW494651.1|CW494651 fsbb001f286a22k0 Sorghum methylation... 147 3e-034
gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1)... 105 8e-034
gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated... 100 2e-033
gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation... 116 4e-033
gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorgh... 116 4e-033
gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkal... 115 1e-032
gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated... 115 1e-032
gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stres... 115 1e-032
gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots ... 115 1e-032
gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated... 115 1e-032
gb|CW190530.1|CW190530 104_612_11174553_148_36834_043 Sorgh... 142 1e-032
gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves... 114 2e-032
gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves... 115 2e-032
gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stres... 100 2e-032
gb|CD225294.1|CD225294 CCC1_39_A01.g1_A007 Callus culture/c... 106 2e-032
gb|CD222247.1|CD222247 CCC1_2_A06.g1_A007 Callus culture/ce... 106 2e-032
gb|CD222182.1|CD222182 CCC1_2_E09.g1_A007 Callus culture/ce... 106 2e-032
gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1... 115 2e-032
gb|BE358056.1|BE358056 DG1_24_E12.b1_A002 Dark Grown 1 (DG1... 105 6e-032
gb|CN125978.1|CN125978 RHOH1_14_A10.g1_A002 Acid- and alkal... 110 8e-032
gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Mer... 114 2e-031
gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorgh... 114 2e-031
gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorgh... 111 3e-031
gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum m... 111 3e-031
gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated... 101 4e-031
gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Mer... 114 4e-031
gb|CN145377.1|CN145377 WOUND1_28_C01.g1_A002 Wounded leaves... 114 6e-031
gb|CX609701.1|CX609701 ANR1_14_F01.b1_A002 Anaerobic roots ... 106 7e-031
gb|CF427419.1|CF427419 PH1_1_A12.g1_A002 Phosphorous-defici... 117 1e-030
gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stres... 90 1e-030
gb|CW141974.1|CW141974 104_533_11136596_148_34941_078 Sorgh... 118 1e-030
gb|BG557514.1|BG557514 EM1_54_B10.b1_A002 Embryo 1 (EM1) So... 116 3e-030
gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum met... 107 5e-030
gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methy... 111 1e-029
gb|AW677398.1|AW677398 DG1_6_C05.b1_A002 Dark Grown 1 (DG1)... 105 1e-029
gb|CX622011.1|CX622011 GABR1_61_B06.g2_A002 GA- or brassino... 107 1e-029
gb|AW923105.1|AW923105 DG1_49_F10.b1_A002 Dark Grown 1 (DG1... 106 1e-029
gb|BG557842.1|BG557842 EM1_55_A10.b1_A002 Embryo 1 (EM1) So... 118 2e-029
gb|CN133158.1|CN133158 OX1_10_B06.g1_A002 Oxidatively-stres... 113 2e-029
gb|CW022096.1|CW022096 104_161_10431639_5_30007 Sorghum met... 115 2e-029
gb|AW677377.1|AW677377 DG1_6_A05.b1_A002 Dark Grown 1 (DG1)... 105 2e-029
gb|CD432560.1|CD432560 ETH1_30_D08.g1_A002 Ethylene-treated... 104 3e-029
gb|CW091410.1|CW091410 104_453_10998534_114_33029_025 Sorgh... 112 3e-029
gb|CW396616.1|CW396616 fsbb001f085c05k0 Sorghum methylation... 112 3e-029
gb|CW112321.1|CW112321 104_486_11104821_148_34541_093 Sorgh... 112 3e-029
gb|CW512360.1|CW512360 115_1_10510471_1_30023 Sorghum unfil... 112 3e-029
gb|CW036817.1|CW036817 104_268_10503984_115_30382 Sorghum m... 112 3e-029
gb|BZ342179.1|BZ342179 ic81a06.b1 WGS-SbicolorF (JM107 adap... 112 3e-029
gb|CN140982.1|CN140982 OX1_48_C12.g1_A002 Oxidatively-stres... 106 3e-029
gb|CN129146.1|CN129146 RHOH1_33_F09.g1_A002 Acid- and alkal... 105 5e-029
gb|CW218492.1|CW218492 104_652_11196219_116_37460_014 Sorgh... 113 5e-029
gb|CD432214.1|CD432214 ETH1_26_E09.g1_A002 Ethylene-treated... 105 5e-029
gb|CW183587.1|CW183587 104_599_11164694_148_36677_055 Sorgh... 105 5e-029
gb|CW279627.1|CW279627 104_754_11407179_148_35439_008 Sorgh... 113 5e-029
gb|CW446759.1|CW446759 fsbb001f179j05f0 Sorghum methylation... 113 5e-029
gb|CL171842.1|CL171842 104_374_10889715_148_31774_003 Sorgh... 118 6e-029
gb|BE362489.1|BE362489 DG1_87_C06.b1_A002 Dark Grown 1 (DG1... 84 6e-029
gb|CN134143.1|CN134143 OX1_20_B11.g1_A002 Oxidatively-stres... 101 8e-029
gb|CD431749.1|CD431749 ETH1_10_F11.g1_A002 Ethylene-treated... 107 9e-029
gb|CN147630.1|CN147630 WOUND1_50_H12.g1_A002 Wounded leaves... 104 1e-028
gb|BM323141.1|BM323141 PIC1_8_B08.b1_A002 Pathogen-infected... 104 1e-028
gb|BM324939.1|BM324939 PIC1_37_G06.b1_A002 Pathogen-infecte... 104 1e-028
gb|CW035319.1|CW035319 104_265_10503086_114_30378 Sorghum m... 109 1e-028
gb|BE594226.1|BE594226 WS1_103_H02.b1_A002 Water-stressed 1... 109 1e-028
gb|CW386824.1|CW386824 fsbb001f070o12f0 Sorghum methylation... 111 2e-028
gb|CW395210.1|CW395210 fsbb001f083c11f0 Sorghum methylation... 109 2e-028
gb|BE360387.1|BE360387 DG1_63_F11.b1_A002 Dark Grown 1 (DG1... 109 2e-028
gb|CN132861.1|CN132861 OX1_8_E01.g1_A002 Oxidatively-stress... 109 2e-028
gb|CN139739.1|CN139739 OX1_23_G10.g1_A002 Oxidatively-stres... 109 2e-028
gb|CW434448.1|CW434448 fsbb001f150c10k0 Sorghum methylation... 104 3e-028
gb|CW434882.1|CW434882 fsbb001f150m16k0 Sorghum methylation... 104 3e-028
gb|CW238007.1|CW238007 104_694_11216489_148_37400_069 Sorgh... 113 3e-028
gb|CW155745.1|CW155745 104_558_11146303_116_36367_026 Sorgh... 113 3e-028
gb|CW311029.1|CW311029 104_800_11470021_116_35753_057 Sorgh... 109 3e-028
gb|BE356065.1|BE356065 DG1_122_C07.b1_A002 Dark Grown 1 (DG... 109 3e-028
gb|CW310091.1|CW310091 104_799_11469537_116_35745_045 Sorgh... 113 6e-028
gb|CW321790.1|CW321790 104_815_11475741_148_35942_091 Sorgh... 107 6e-028
gb|CW204527.1|CW204527 104_632_11186589_148_36922_087 Sorgh... 113 6e-028
gb|CW218303.1|CW218303 104_651_11196114_116_37459_065 Sorgh... 105 6e-028
gb|CW198655.1|CW198655 104_623_11183089_148_36841_007 Sorgh... 113 6e-028
gb|CW218302.1|CW218302 104_651_11196114_116_37067_065 Sorgh... 105 6e-028
gb|CW416582.1|CW416582 fsbb001f117d07f0 Sorghum methylation... 113 6e-028
gb|CW492797.1|CW492797 fsbb001f283e08f0 Sorghum methylation... 78 1e-027
gb|CW157339.1|CW157339 104_560_11147178_116_36386_069 Sorgh... 110 2e-027
gb|CN124295.1|CN124295 RHOH1_3_G12.g1_A002 Acid- and alkali... 110 2e-027
gb|CW224877.1|CW224877 104_662_11204056_116_37206_060 Sorgh... 101 3e-027
gb|CW168013.1|CW168013 104_577_11153917_148_36492_055 Sorgh... 101 3e-027
gb|CN138744.1|CN138744 OX1_13_D12.g1_A002 Oxidatively-stres... 101 4e-027
gb|CX622518.1|CX622518 GABR1_64_A06.g2_A002 GA- or brassino... 108 5e-027
gb|BF705100.1|BF705100 RHIZ2_1_D07.b1_A003 Rhizome2 (RHIZ2)... 102 7e-027
gb|CN141562.1|CN141562 OX1_52_A06.g1_A002 Oxidatively-stres... 108 7e-027
gb|BF705368.1|BF705368 RHIZ2_3_B07.b1_A003 Rhizome2 (RHIZ2)... 102 7e-027
gb|CW248191.1|CW248191 104_709_11222168_148_35026_024 Sorgh... 101 1e-026
gb|BI643627.1|BI643627 DG1_92_B06.b1_A002 Dark Grown 1 (DG1... 101 1e-026
gb|CW252883.1|CW252883 104_716_11224767_148_35098_060 Sorgh... 100 2e-026
gb|CW454471.1|CW454471 fsbb001f198o23k0 Sorghum methylation... 100 2e-026
gb|CW090101.1|CW090101 104_435_10949088_114_32597_084 Sorgh... 100 2e-026
gb|CW310613.1|CW310613 104_799_11469805_148_37433_049 Sorgh... 107 3e-026
gb|CN132388.1|CN132388 OX1_5_H04.g1_A002 Oxidatively-stress... 111 6e-026
gb|CW220174.1|CW220174 104_654_11197212_116_37148_036 Sorgh... 108 9e-026
gb|CW174398.1|CW174398 104_586_11157384_116_36561_088 Sorgh... 100 9e-026
gb|CW447900.1|CW447900 fsbb001f181d19k0 Sorghum methylation... 108 9e-026
gb|CL187928.1|CL187928 104_404_10901237_114_32442_031 Sorgh... 69 2e-025
gb|CB925482.1|CB925482 ABA1_33_G05.g1_A012 Abscisic acid-tr... 105 4e-025
gb|CL178881.1|CL178881 104_387_10894905_116_31906_201 Sorgh... 116 5e-025
gb|CW401628.1|CW401628 fsbb001f092i09k0 Sorghum methylation... 116 5e-025
gb|BG412766.1|BG412766 OV2_34_E08.b1_A002 Ovary 2 (OV2) Sor... 116 5e-025
gb|CD220847.1|CD220847 CCC1_69_F04.g1_A007 Callus culture/c... 116 5e-025
gb|CD430870.1|CD430870 ETH1_5_F09.g1_A002 Ethylene-treated ... 116 5e-025
gb|CD430899.1|CD430899 ETH1_5_E09.g1_A002 Ethylene-treated ... 116 5e-025
gb|CD463131.1|CD463131 ETH1_42_D03.g1_A002 Ethylene-treated... 116 5e-025
gb|CN132197.1|CN132197 OX1_4_D12.g1_A002 Oxidatively-stress... 116 5e-025
gb|CN137157.1|CN137157 OX1_55_B10.g1_A002 Oxidatively-stres... 116 5e-025
gb|CN139737.1|CN139737 OX1_23_G08.g1_A002 Oxidatively-stres... 116 5e-025
gb|CN141334.1|CN141334 OX1_50_G06.g1_A002 Oxidatively-stres... 116 5e-025
gb|CN142356.1|CN142356 WOUND1_9_B05.g1_A002 Wounded leaves ... 116 5e-025
gb|CN143356.1|CN143356 WOUND1_15_F02.g1_A002 Wounded leaves... 116 5e-025
gb|CN148797.1|CN148797 WOUND1_58_G11.g1_A002 Wounded leaves... 116 5e-025
gb|CN149218.1|CN149218 WOUND1_61_A02.g1_A002 Wounded leaves... 116 5e-025
gb|CX622055.1|CX622055 GABR1_61_F04.g2_A002 GA- or brassino... 63 6e-025
gb|CN130350.1|CN130350 RHOH1_40_H08.g1_A002 Acid- and alkal... 63 6e-025
gb|CW033159.1|CW033159 104_262_10501795_115_30362 Sorghum m... 113 8e-025
gb|CW068471.1|CW068471 104_317_10525139_1_30096 Sorghum met... 80 8e-025
gb|CL172252.1|CL172252 104_374_10890016_116_31775_304 Sorgh... 106 8e-025
gb|AW287684.2|AW287684 LG1_271_B05.b1_A002 Light Grown 1 (L... 115 1e-024
gb|CW139439.1|CW139439 104_529_11135238_148_34909_021 Sorgh... 95 1e-024
gb|CN127401.1|CN127401 RHOH1_22_G02.g3_A002 Acid- and alkal... 63 2e-024
gb|CX609787.1|CX609787 ANR1_14_F01.g1_A002 Anaerobic roots ... 66 3e-024
gb|CW209075.1|CW209075 104_638_11189032_148_36983_050 Sorgh... 69 3e-024
gb|CW493277.1|CW493277 fsbb001f283p16f0 Sorghum methylation... 113 7e-024
gb|CN141237.1|CN141237 OX1_50_E02.b1_A002 Oxidatively-stres... 64 9e-024
gb|CW124983.1|CW124983 104_505_11112086_148_34712_063 Sorgh... 112 9e-024
gb|CN135950.1|CN135950 OX1_39_H10.g1_A002 Oxidatively-stres... 100 9e-024
gb|CX620716.1|CX620716 GABR1_53_C06.g1_A002 GA- or brassino... 108 1e-023
gb|CW180136.1|CW180136 104_594_11160476_148_36633_072 Sorgh... 81 1e-023
gb|CW366630.1|CW366630 fsbb001f039l10k0 Sorghum methylation... 112 1e-023
gb|CD463182.1|CD463182 ETH1_42_F03.g1_A002 Ethylene-treated... 111 2e-023
gb|CW215449.1|CW215449 104_647_11194545_116_37165_035 Sorgh... 83 3e-023
gb|CL157162.1|CL157162 104_344_10783358_114_31373_302 Sorgh... 88 3e-023
gb|CW490180.1|CW490180 fsbb001f275h22f0 Sorghum methylation... 86 6e-023
gb|CW067692.1|CW067692 104_315_10524451_114_30124 Sorghum m... 109 8e-023
gb|BG649436.1|BG649436 EM1_79_D06.b1_A002 Embryo 1 (EM1) So... 109 8e-023
gb|BZ332713.1|BZ332713 hx30b08.g1 WGS-SbicolorF (JM107 adap... 89 8e-023
gb|CD463496.1|CD463496 ETH1_44_A03.g1_A002 Ethylene-treated... 66 1e-022
gb|BG559403.1|BG559403 RHIZ2_54_D07.b1_A003 Rhizome2 (RHIZ2... 108 2e-022
gb|BZ341024.1|BZ341024 ic42f05.b1 WGS-SbicolorF (JM107 adap... 107 3e-022
gb|CL190412.1|CL190412 104_408_10906068_114_32486_040 Sorgh... 107 3e-022
gb|CD463838.1|CD463838 ETH1_47_F10.b1_A002 Ethylene-treated... 55 4e-022
gb|CD463437.1|CD463437 ETH1_44_B03.g1_A002 Ethylene-treated... 63 5e-022
gb|CW302191.1|CW302191 104_786_11464593_116_35664_043 Sorgh... 59 6e-022
gb|BE358144.1|BE358144 DG1_24_E12.g1_A002 Dark Grown 1 (DG1... 72 8e-022
gb|CL183364.1|CL183364 104_395_10898123_114_31917_347 Sorgh... 100 1e-021
gb|CD462982.1|CD462982 ETH1_41_C06.g1_A002 Ethylene-treated... 105 2e-021
gb|CW218304.1|CW218304 104_651_11196114_148_37066_065 Sorgh... 72 3e-021
gb|BE357760.1|BE357760 DG1_22_G12.b1_A002 Dark Grown 1 (DG1... 59 3e-021
gb|CW457970.1|CW457970 fsbb001f204a10k0 Sorghum methylation... 66 9e-021
>gb|CD219557.1|CD219557 CCC1_57_E04.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_E04_A007 5', mRNA sequence
Length = 646
Score = 386 bits (837), Expect = e-106
Identities = 160/176 (90%), Positives = 164/176 (93%)
Frame = +2 / +1
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A+PL LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG
Sbjct: 118 ATPLKLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 297
Query: 263 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQ 442
RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVG VFASTGEDQ
Sbjct: 298 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGAVFASTGEDQ 477
Query: 443 EAAVRQVHENLALIESELRDGAXXXXXXXXXDEVGLLDVVLGCGSYWLAVFEEVTG 610
EAAVRQVHENLAL+E+ELRDGA EVGLLDVVLGCGSYWLAVFE+VTG
Sbjct: 478 EAAVRQVHENLALLETELRDGAFRGRRFFGGAEVGLLDVVLGCGSYWLAVFEDVTG 645
Score = 153 bits (328), Expect(3) = 6e-053
Identities = 61/90 (67%), Positives = 62/90 (68%)
Frame = -2 / -3
Query: 486 SIRARFSCTWRTAASWSSPVDANTVPTAGPSLSSAKWHQNXXXXXXXXXXXXXXXXXXXX 307
S ARFSCT RTAASWSSPVDANT PTAGPSLSSAKWHQN
Sbjct: 521 SSSARFSCTCRTAASWSSPVDANTAPTAGPSLSSAKWHQNRASARSKASAGRSGRVSGQA 342
Query: 306 XXRYWRIMTDSGSARPPWTSTGTFLWTGLW 217
RYWR+MTDSG ARPPWT TGTFLWTGLW
Sbjct: 341 SSRYWRMMTDSGRARPPWTRTGTFLWTGLW 252
Score = 102 bits (218), Expect(3) = 8e-032
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -1 / -2
Query: 391 VVGEVAPEPRERAVEGVGGEQRAGLRPGVVKVLEDNDGLRERAAAVDEHG 242
VVGEVAPEPRERAVEGVGGE+RAGL PGVV+VLED+DGLRE AAAVDE G
Sbjct: 426 VVGEVAPEPRERAVEGVGGEERAGLGPGVVEVLEDDDGLREGAAAVDEDG 277
Score = 62.5 bits (130), Expect(3) = 6e-053
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1 / -2
Query: 169 ELQALEPQRQLHAVRVRARPRPEQHQRG 86
EL+ALEPQRQLHAVRVRARPRPEQ QRG
Sbjct: 204 ELKALEPQRQLHAVRVRARPRPEQLQRG 121
Score = 49.6 bits (102), Expect(3) = 8e-032
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -3
Query: 144 ASCTRCVYELAHDPNSISGDA 82
ASCTRCVYELAHDPNS SG A
Sbjct: 179 ASCTRCVYELAHDPNSFSGVA 117
Score = 33.1 bits (66), Expect(3) = 6e-053
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -2 / -3
Query: 609 PVTSSNTASQ*EPQ 568
PVTSSNTASQ*EPQ
Sbjct: 644 PVTSSNTASQ*EPQ 603
Score = 29.5 bits (58), Expect(3) = 8e-032
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / -2
Query: 610 PGHLLEHGEPVG 575
PG +LEHGEPVG
Sbjct: 645 PGDVLEHGEPVG 610
>gb|CD229233.1|CD229233 CCC1_13_F08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_13_F08_A007 5', mRNA sequence
Length = 617
Score = 373 bits (809), Expect = e-102
Identities = 155/170 (91%), Positives = 158/170 (92%)
Frame = +2 / +1
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A+PL LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG
Sbjct: 106 ATPLKLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 285
Query: 263 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQ 442
RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVG VFASTGEDQ
Sbjct: 286 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGAVFASTGEDQ 465
Query: 443 EAAVRQVHENLALIESELRDGAXXXXXXXXXDEVGLLDVVLGCGSYWLAV 592
EAAVRQVHENLAL+E+ELRDGA EVGLLDVVLGCGSYWLAV
Sbjct: 466 EAAVRQVHENLALLETELRDGAFRGRRFFGGAEVGLLDVVLGCGSYWLAV 615
Score = 153 bits (328), Expect(3) = 1e-049
Identities = 61/90 (67%), Positives = 62/90 (68%)
Frame = -2 / -1
Query: 486 SIRARFSCTWRTAASWSSPVDANTVPTAGPSLSSAKWHQNXXXXXXXXXXXXXXXXXXXX 307
S ARFSCT RTAASWSSPVDANT PTAGPSLSSAKWHQN
Sbjct: 509 SSSARFSCTCRTAASWSSPVDANTAPTAGPSLSSAKWHQNRASARSKASAGRSGRVSGQA 330
Query: 306 XXRYWRIMTDSGSARPPWTSTGTFLWTGLW 217
RYWR+MTDSG ARPPWT TGTFLWTGLW
Sbjct: 329 SSRYWRMMTDSGRARPPWTRTGTFLWTGLW 240
Score = 102 bits (218), Expect(2) = 1e-029
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -1 / -3
Query: 391 VVGEVAPEPRERAVEGVGGEQRAGLRPGVVKVLEDNDGLRERAAAVDEHG 242
VVGEVAPEPRERAVEGVGGE+RAGL PGVV+VLED+DGLRE AAAVDE G
Sbjct: 414 VVGEVAPEPRERAVEGVGGEERAGLGPGVVEVLEDDDGLREGAAAVDEDG 265
Score = 62.5 bits (130), Expect(3) = 1e-049
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1 / -3
Query: 169 ELQALEPQRQLHAVRVRARPRPEQHQRG 86
EL+ALEPQRQLHAVRVRARPRPEQ QRG
Sbjct: 192 ELKALEPQRQLHAVRVRARPRPEQLQRG 109
Score = 49.6 bits (102), Expect(2) = 1e-029
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 144 ASCTRCVYELAHDPNSISGDA 82
ASCTRCVYELAHDPNS SG A
Sbjct: 167 ASCTRCVYELAHDPNSFSGVA 105
Score = 22.1 bits (42), Expect(3) = 1e-049
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 594 NTASQ*EPQ 568
NTASQ*EPQ
Sbjct: 617 NTASQ*EPQ 591
>gb|CW323788.1|CW323788 104_818_11476816_148_35907_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11476816, DNA
sequence
Length = 648
Score = 254 bits (549), Expect = 2e-066
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +2 / +1
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A+PL LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG
Sbjct: 298 ATPLKLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 477
Query: 263 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKL 397
RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDK+
Sbjct: 478 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKV 612
Score = 98.7 bits (209), Expect(2) = 2e-032
Identities = 43/50 (86%), Positives = 46/50 (92%)
Frame = -1 / -1
Query: 391 VVGEVAPEPRERAVEGVGGEQRAGLRPGVVKVLEDNDGLRERAAAVDEHG 242
VVGEVAPEPRERAVEGVGGE+RA L PGVV+VLED+DGLRE AAAVDE G
Sbjct: 606 VVGEVAPEPRERAVEGVGGEERACLGPGVVEVLEDDDGLREGAAAVDEDG 457
Score = 90.4 bits (191), Expect(2) = 5e-026
Identities = 34/60 (56%), Positives = 36/60 (60%)
Frame = -2 / -2
Query: 396 SLSSAKWHQNXXXXXXXXXXXXXXXXXXXXXXRYWRIMTDSGSARPPWTSTGTFLWTGLW 217
+LSSAKWHQN RYWR+MTDSG ARPPWT TGTFLWTGLW
Sbjct: 611 TLSSAKWHQNRASARSKASAGRSGRVSGQASSRYWRMMTDSGRARPPWTRTGTFLWTGLW 432
Score = 62.5 bits (130), Expect(2) = 2e-032
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1 / -1
Query: 169 ELQALEPQRQLHAVRVRARPRPEQHQRG 86
EL+ALEPQRQLHAVRVRARPRPEQ QRG
Sbjct: 384 ELKALEPQRQLHAVRVRARPRPEQLQRG 301
Score = 49.6 bits (102), Expect(2) = 5e-026
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 144 ASCTRCVYELAHDPNSISGDA 82
ASCTRCVYELAHDPNS SG A
Sbjct: 359 ASCTRCVYELAHDPNSFSGVA 297
>gb|CW500124.1|CW500124 fsbb001f295e09k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295e09, DNA
sequence
Length = 481
Score = 254 bits (549), Expect = 2e-066
Identities = 102/105 (97%), Positives = 104/105 (99%)
Frame = +2 / +2
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A+PL LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG
Sbjct: 137 ATPLKLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 316
Query: 263 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKL 397
RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDK+
Sbjct: 317 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKV 451
Score = 102 bits (218), Expect(2) = 1e-033
Identities = 44/50 (88%), Positives = 47/50 (94%)
Frame = -1 / -1
Query: 391 VVGEVAPEPRERAVEGVGGEQRAGLRPGVVKVLEDNDGLRERAAAVDEHG 242
VVGEVAPEPRERAVEGVGGE+RAGL PGVV+VLED+DGLRE AAAVDE G
Sbjct: 445 VVGEVAPEPRERAVEGVGGEERAGLGPGVVEVLEDDDGLREGAAAVDEDG 296
Score = 90.4 bits (191), Expect(2) = 5e-026
Identities = 34/60 (56%), Positives = 36/60 (60%)
Frame = -2 / -2
Query: 396 SLSSAKWHQNXXXXXXXXXXXXXXXXXXXXXXRYWRIMTDSGSARPPWTSTGTFLWTGLW 217
+LSSAKWHQN RYWR+MTDSG ARPPWT TGTFLWTGLW
Sbjct: 450 TLSSAKWHQNRASARSKASAGRSGRVSGQASSRYWRMMTDSGRARPPWTRTGTFLWTGLW 271
Score = 62.5 bits (130), Expect(2) = 1e-033
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1 / -1
Query: 169 ELQALEPQRQLHAVRVRARPRPEQHQRG 86
EL+ALEPQRQLHAVRVRARPRPEQ QRG
Sbjct: 223 ELKALEPQRQLHAVRVRARPRPEQLQRG 140
Score = 49.6 bits (102), Expect(2) = 5e-026
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -2
Query: 144 ASCTRCVYELAHDPNSISGDA 82
ASCTRCVYELAHDPNS SG A
Sbjct: 198 ASCTRCVYELAHDPNSFSGVA 136
>gb|BZ345790.1|BZ345790 ht57a10.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht57a10 5', DNA sequence
Length = 695
Score = 246 bits (531), Expect = 7e-064
Identities = 99/101 (98%), Positives = 100/101 (99%)
Frame = +2 / +1
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A+PL LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG
Sbjct: 298 ATPLKLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 477
Query: 263 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFA 385
RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFA
Sbjct: 478 RALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFA 600
Score = 99.1 bits (210), Expect(2) = 2e-032
Identities = 42/48 (87%), Positives = 45/48 (93%)
Frame = -1 / -3
Query: 385 GEVAPEPRERAVEGVGGEQRAGLRPGVVKVLEDNDGLRERAAAVDEHG 242
GEVAPEPRERAVEGVGGE+RAGL PGVV+VLED+DGLRE AAAVDE G
Sbjct: 600 GEVAPEPRERAVEGVGGEERAGLGPGVVEVLEDDDGLREGAAAVDEDG 457
Score = 85.4 bits (180), Expect(2) = 1e-024
Identities = 35/74 (47%), Positives = 37/74 (50%)
Frame = -2 / -1
Query: 438 SSPVDANTVPTAGPSLSSAKWHQNXXXXXXXXXXXXXXXXXXXXXXRYWRIMTDSGSARP 259
SS + TA AKWHQN RYWR+MTDSG ARP
Sbjct: 653 SSDDETGEPATAYVPCRRAKWHQNRASARSKASAGRSGRVSGQASSRYWRMMTDSGRARP 474
Query: 258 PWTSTGTFLWTGLW 217
PWT TGTFLWTGLW
Sbjct: 473 PWTRTGTFLWTGLW 432
Score = 62.5 bits (130), Expect(2) = 2e-032
Identities = 26/28 (92%), Positives = 27/28 (96%)
Frame = -1 / -3
Query: 169 ELQALEPQRQLHAVRVRARPRPEQHQRG 86
EL+ALEPQRQLHAVRVRARPRPEQ QRG
Sbjct: 384 ELKALEPQRQLHAVRVRARPRPEQLQRG 301
Score = 49.6 bits (102), Expect(2) = 1e-024
Identities = 19/21 (90%), Positives = 19/21 (90%)
Frame = -2 / -1
Query: 144 ASCTRCVYELAHDPNSISGDA 82
ASCTRCVYELAHDPNS SG A
Sbjct: 359 ASCTRCVYELAHDPNSFSGVA 297
>gb|CD430586.1|CD430586 ETH1_19_E05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_19_E05_A002 5', mRNA sequence
Length = 603
Score = 171 bits (367), Expect(2) = 4e-046
Identities = 69/139 (49%), Positives = 97/139 (69%)
Frame = +2 / +3
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + + G WAS RV+ ALRLKG+E++YV+EDL NKS +LLR+NPV KKVPVLVH
Sbjct: 51 AEKGVKVLGMWASPMVIRVEWALRLKGVEYEYVDEDLANKSADLLRYNPVTKKVPVLVHD 230
Query: 260 GRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGED 439
G + ES II++Y+D+AW P++PAD ++RA ARFW FA++K A+ +F +TGE
Sbjct: 231 GNPIAESTIIVEYIDEAWKGGYPIMPADPYERAQARFWARFAEEKCNAALYPIFTATGEA 410
Query: 440 QEAAVRQVHENLALIESEL 496
Q AV++ + L +E+ L
Sbjct: 411 QRKAVQEAQQCLKTLETAL 467
Score = 36.3 bits (73), Expect(2) = 4e-046
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTG 610
D VG LD+V+G ++WL V EEV G
Sbjct: 492 DAVGYLDIVVGWYAHWLPVMEEVIG 566
>gb|CN130948.1|CN130948 RHOH1_44_H12.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_44_H12_A002 5', mRNA sequence
Length = 835
Score = 111 bits (238), Expect(3) = 3e-040
Identities = 42/75 (56%), Positives = 63/75 (84%)
Frame = +2 / +1
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ + G +AS ++HRV+ AL+LKG+ ++ +EEDL NKS+ LL +NPVHKKVPVL+HG RA
Sbjct: 55 PVKIIGHYASPFSHRVEAALQLKGVPYELIEEDLSNKSELLLANNPVHKKVPVLLHGDRA 234
Query: 269 LPESVIILQYLDDAW 313
+ ES++I+QY+D+A+
Sbjct: 235 ICESLVIVQYVDEAF 279
Score = 66.1 bits (138), Expect(3) = 3e-040
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2 / +1
Query: 326 PLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIESEL 496
PLLPAD +DRA+ARFW F D KL + G+ Q+A V + +NLAL+E++L
Sbjct: 289 PLLPADPYDRAMARFWADFIDSKLVKPFWLAHWTEGDGQKAQVEEAKQNLALLEAQL 459
Score = 27.6 bits (54), Expect(3) = 3e-040
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D VG +D+ WL+ EEVTGV
Sbjct: 484 DTVGYVDLAACVLGPWLSAVEEVTGV 561
>gb|CN141293.1|CN141293 OX1_50_C03.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_C03_A002 5', mRNA sequence
Length = 603
Score = 111 bits (238), Expect(3) = 3e-040
Identities = 42/75 (56%), Positives = 63/75 (84%)
Frame = +2 / +3
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ + G +AS ++HRV+ AL+LKG+ ++ +EEDL NKS+ LL +NPVHKKVPVL+HG RA
Sbjct: 60 PVKIIGHYASPFSHRVEAALQLKGVPYELIEEDLSNKSELLLANNPVHKKVPVLLHGDRA 239
Query: 269 LPESVIILQYLDDAW 313
+ ES++I+QY+D+A+
Sbjct: 240 ICESLVIVQYVDEAF 284
Score = 66.1 bits (138), Expect(3) = 3e-040
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2 / +3
Query: 326 PLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIESEL 496
PLLPAD +DRA+ARFW F D KL + G+ Q+A V + +NLAL+E++L
Sbjct: 294 PLLPADPYDRAMARFWADFIDSKLVKPFWLAHWTEGDGQKAQVEEAKQNLALLEAQL 464
Score = 27.6 bits (54), Expect(3) = 3e-040
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D VG +D+ WL+ EEVTGV
Sbjct: 489 DTVGYVDLAACVLGPWLSAVEEVTGV 566
>gb|CD431093.1|CD431093 ETH1_6_H02.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_H02_A002 5', mRNA sequence
Length = 597
Score = 111 bits (238), Expect(3) = 3e-040
Identities = 42/75 (56%), Positives = 63/75 (84%)
Frame = +2 / +2
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ + G +AS ++HRV+ AL+LKG+ ++ +EEDL NKS+ LL +NPVHKKVPVL+HG RA
Sbjct: 53 PVKIIGHYASPFSHRVEAALQLKGVPYELIEEDLSNKSELLLANNPVHKKVPVLLHGDRA 232
Query: 269 LPESVIILQYLDDAW 313
+ ES++I+QY+D+A+
Sbjct: 233 ICESLVIVQYVDEAF 277
Score = 66.1 bits (138), Expect(3) = 3e-040
Identities = 27/57 (47%), Positives = 37/57 (64%)
Frame = +2 / +2
Query: 326 PLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIESEL 496
PLLPAD +DRA+ARFW F D KL + G+ Q+A V + +NLAL+E++L
Sbjct: 287 PLLPADPYDRAMARFWADFIDSKLVKPFWLAHWTEGDGQKAQVEEAKQNLALLEAQL 457
Score = 27.6 bits (54), Expect(3) = 3e-040
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D VG +D+ WL+ EEVTGV
Sbjct: 482 DTVGYVDLAACVLGPWLSAVEEVTGV 559
>gb|CW301871.1|CW301871 104_785_11464426_148_36264_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464426, DNA
sequence
Length = 712
Score = 137 bits (293), Expect(2) = 5e-038
Identities = 54/85 (63%), Positives = 68/85 (80%)
Frame = +2 / +2
Query: 68 AIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPV 247
A P A L+L G+W+S + RV++AL LKGL +DY+EEDL NKSD LLR NPVHKKVPV
Sbjct: 8 AAPGAGGELLLLGTWSSPWVIRVRVALGLKGLSYDYLEEDLANKSDLLLRSNPVHKKVPV 187
Query: 248 LVHGGRALPESVIILQYLDDAWPET 322
L+HGGR + ES++ILQYLD++WP T
Sbjct: 188 LIHGGRPVRESLVILQYLDESWPTT 262
Score = 43.2 bits (88), Expect(2) = 5e-038
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 326 PLLPADAFDRALARFWCHFADDKL 397
PLLPAD +DRA ARFW + +DK+
Sbjct: 275 PLLPADPYDRATARFWAAYVNDKV 346
>gb|CW298152.1|CW298152 104_780_11462428_116_35649_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462428, DNA
sequence
Length = 609
Score = 114 bits (243), Expect(3) = 1e-036
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G W S Y +RVQ+ L LKGL ++YVEEDL NKS+ LL+ NPVHKKVPVL+H G+ +
Sbjct: 26 LKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLQSNPVHKKVPVLIHDGKPI 205
Query: 272 PESVIILQYLDDAWPETRP 328
ES +I+QYLD+ + T P
Sbjct: 206 AESQVIVQYLDEVFAGTGP 262
Score = 43.7 bits (89), Expect(3) = 1e-036
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
+LPAD + RA ARFW F DDK+G T+ + +++A
Sbjct: 266 VLPADPYGRATARFWAAFVDDKVGSPWHTILFAREAEKKA 385
Score = 35.9 bits (72), Expect(3) = 1e-036
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
D VG +DVVLG W VFE++ GVR
Sbjct: 479 DGVGFVDVVLGSYLGWFKVFEKMVGVR 559
>gb|CW095836.1|CW095836 104_461_11001557_148_34328_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11001557, DNA
sequence
Length = 583
Score = 113 bits (242), Expect(3) = 1e-035
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +2 / -2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G W S Y +RVQ+ L LKGL ++YVEEDL NKS+ LL+ NPVHKKVPVL+H G+ +
Sbjct: 582 LKLLGVWDSLYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLQSNPVHKKVPVLIHDGKPI 403
Query: 272 PESVIILQYLDDAWPETRP 328
ES +I+QYLD+ + T P
Sbjct: 402 AESQVIVQYLDEVFAGTGP 346
Score = 40.9 bits (83), Expect(3) = 1e-035
Identities = 16/40 (40%), Positives = 24/40 (60%)
Frame = +2 / -2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
+LPAD + RA AR W F DDK+G T+ + +++A
Sbjct: 342 VLPADPYGRATARLWAAFVDDKVGSPWHTILFAREAEKKA 223
Score = 35.9 bits (72), Expect(3) = 1e-035
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2 / -2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
D VG +DVVLG W VFE++ GVR
Sbjct: 129 DGVGFVDVVLGSYLGWFKVFEKMVGVR 49
>gb|CW500123.1|CW500123 fsbb001f295e09f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f295e09, DNA
sequence
Length = 410
Score = 113 bits (242), Expect(4) = 1e-035
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +3 / -2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
G LVDADAFPRFHAWLRDFEALDEVR+TIPAVDRLL+YARGLRHMLLGL
Sbjct: 367 GLRLVDADAFPRFHAWLRDFEALDEVRDTIPAVDRLLDYARGLRHMLLGL 218
Score = 95.0 bits (201), Expect(3) = 2e-025
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -3 / +2
Query: 758 EAEQHVAEAARVLEQAVHRGDGLPDLVQGLEVAQPGVEAREGVGVHE 618
EAEQHVAEAARV+++AV GDG+ DLVQGLEVAQPGVEAREGVGVHE
Sbjct: 218 EAEQHVAEAARVVQEAVDGGDGVADLVQGLEVAQPGVEAREGVGVHE 358
Score = 41.8 bits (85), Expect(4) = 1e-035
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = +2 / -2
Query: 566 GCGSYWLAVFEEVTGVR 616
GCGSYWL VFE+VTG+R
Sbjct: 409 GCGSYWLTVFEDVTGLR 359
Score = 31.8 bits (63), Expect(3) = 2e-025
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -2 / +3
Query: 615 RTPVTSSNTASQ*EP 571
R+PVTSSNT SQ*EP
Sbjct: 360 RSPVTSSNTVSQ*EP 404
Score = 31.8 bits (63), Expect(3) = 2e-025
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = -3 / +2
Query: 953 HGAIDSANYTGTT 915
HGAID+ANYTGT+
Sbjct: 2 HGAIDTANYTGTS 40
Score = 26.3 bits (51), Expect(4) = 1e-035
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +1 / -3
Query: 898 AISS*YVVPV*FAESIAPC 954
A * +VPV*FA S+APC
Sbjct: 57 ARDQ*QLVPV*FAVSMAPC 1
Score = 25.8 bits (50), Expect(4) = 1e-035
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2 / -1
Query: 827 G*HHRRHLNAGRRRVGRLPAPSG 895
G*H RRHLNA VG SG
Sbjct: 152 G*HRRRHLNAQGGVVGLRRPASG 84
>gb|CD219536.1|CD219536 CCC1_57_E04.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_E04_A007 3', mRNA sequence
Length = 580
Score = 113 bits (242), Expect(5) = 8e-035
Identities = 46/50 (92%), Positives = 48/50 (96%)
Frame = +3 / +3
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
G LVDADAFPRFHAWLRDFEALDEVR+TIPAVDRLL+YARGLRHMLLGL
Sbjct: 15 GLRLVDADAFPRFHAWLRDFEALDEVRDTIPAVDRLLDYARGLRHMLLGL 164
Score = 94.5 bits (200), Expect(3) = 2e-023
Identities = 40/47 (85%), Positives = 44/47 (93%)
Frame = -3 / -3
Query: 758 EAEQHVAEAARVLEQAVHRGDGLPDLVQGLEVAQPGVEAREGVGVHE 618
EAEQHVAEAARV+++AV GDG+ DLVQGLEVAQPGVEAREGVGVHE
Sbjct: 164 EAEQHVAEAARVVKEAVDGGDGVADLVQGLEVAQPGVEAREGVGVHE 24
Score = 35.9 bits (72), Expect(5) = 8e-035
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2 / +2
Query: 905 VAST*YQYSLQSRLRHVWWLRACACRRPGLECGSAAATVNWPSLSSCR 1048
++S+*YQYSL R RHV + A + PG+ C + W SL R
Sbjct: 332 ISSS*YQYSLPCRWRHVRVVAAESACVPGVGCCCCHPLL*WRSLCLSR 475
Score = 33.6 bits (67), Expect(3) = 2e-023
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2 / -2
Query: 990 PGRRQAQARSHHTWRNRLCKLYWYYVL 910
PG A + TWR+R KLYWY +L
Sbjct: 417 PGTHADSAATTRTWRHRHGKLYWY*LL 337
Score = 25.8 bits (50), Expect(5) = 8e-035
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2 / +2
Query: 827 G*HHRRHLNAGRRRVGRLPAPSG 895
G*H RRHLNA VG SG
Sbjct: 230 G*HRRRHLNAQGGVVGLRRPASG 298
Score = 24.9 bits (48), Expect(3) = 2e-023
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1 / -1
Query: 1081 RRETERVEKKNSTARQT 1031
R++ + VEK NST RQT
Sbjct: 514 RKKKKDVEKTNSTPRQT 464
Score = 24.0 bits (46), Expect(5) = 8e-035
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +3
Query: 1032 VCLAVEFFFST 1064
VCL VEF FST
Sbjct: 465 VCLGVEFVFST 497
Score = 22.6 bits (43), Expect(5) = 8e-035
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 1171 NLVCLYVAVWLAC 1209
+L L +AVWLAC
Sbjct: 541 SLCLLVLAVWLAC 579
>gb|CD428786.1|CD428786 ETH1_36_H03.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_36_H03_A002 3', mRNA sequence
Length = 583
Score = 111 bits (238), Expect(5) = 1e-034
Identities = 45/47 (95%), Positives = 47/47 (100%)
Frame = +3 / +1
Query: 618 LVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLLGL 758
LVDADAFPRFHAWLRDFEALDEVR+TIPAVDRLL+YARGLRHMLLGL
Sbjct: 1 LVDADAFPRFHAWLRDFEALDEVRDTIPAVDRLLDYARGLRHMLLGL 141
Score = 96.4 bits (204), Expect(4) = 9e-026
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -3 / -2
Query: 758 EAEQHVAEAARVLEQAVHRGDGLPDLVQGLEVAQPGVEAREGVGVHE 618
EAEQHVAEAARV+E+AV GDG+ DLVQGLEVAQPGVEAREGVGVHE
Sbjct: 141 EAEQHVAEAARVVEEAVDGGDGVADLVQGLEVAQPGVEAREGVGVHE 1
Score = 35.9 bits (72), Expect(5) = 1e-034
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +2 / +3
Query: 905 VAST*YQYSLQSRLRHVWWLRACACRRPGLECGSAAATVNWPSLSSCR 1048
++S+*YQYSL R RHV + A + PG+ C + W SL R
Sbjct: 309 ISSS*YQYSLPCRWRHVRVVAAESACVPGVGCCCCHPLL*WRSLCLSR 452
Score = 33.6 bits (67), Expect(4) = 9e-026
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2 / -1
Query: 990 PGRRQAQARSHHTWRNRLCKLYWYYVL 910
PG A + TWR+R KLYWY +L
Sbjct: 394 PGTHADSAATTRTWRHRHGKLYWY*LL 314
Score = 25.8 bits (50), Expect(5) = 1e-034
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2 / +3
Query: 827 G*HHRRHLNAGRRRVGRLPAPSG 895
G*H RRHLNA VG SG
Sbjct: 207 G*HRRRHLNAQGGVVGLRRPASG 275
Score = 25.4 bits (49), Expect(4) = 9e-026
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -3
Query: 1223 WLTFKQASQTA 1191
WLTF+QASQ A
Sbjct: 569 WLTFQQASQAA 537
Score = 24.0 bits (46), Expect(5) = 1e-034
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 1183 LYVAVWLACLNVS 1221
L +A WLAC NVS
Sbjct: 529 LVLAAWLAC*NVS 567
Score = 24.0 bits (46), Expect(5) = 1e-034
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 1032 VCLAVEFFFST 1064
VCL VEF FST
Sbjct: 442 VCLGVEFVFST 474
Score = 23.5 bits (45), Expect(4) = 9e-026
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1 / -3
Query: 1081 RRETERVEKKNSTARQT 1031
+++ + VEK NST RQT
Sbjct: 491 KKKKKDVEKTNSTPRQT 441
>gb|CN130505.1|CN130505 RHOH1_42_A05.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_42_A05_A002 3', mRNA sequence
Length = 664
Score = 116 bits (248), Expect(3) = 1e-034
Identities = 45/95 (47%), Positives = 65/95 (68%)
Frame = +2 / +2
Query: 212 LRHNPVHKKVPVLVHGGRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHFADD 391
LR+NPV KKVPVLVH G + ES II++Y+D+AW P++PAD ++ A ARFW FA++
Sbjct: 2 LRYNPVTKKVPVLVHDGNPIAESTIIVEYIDEAWKGGYPIMPADPYEGAQARFWARFAEE 181
Query: 392 KLGPAVGTVFASTGEDQEAAVRQVHENLALIESEL 496
K + +F +TGE Q AV++ H+ L +E+ L
Sbjct: 182 KCNAVLYPIFTATGEAQRKAVQEAHQCLKTLETPL 286
Score = 36.3 bits (73), Expect(3) = 1e-034
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTG 610
D VG LD+V+G ++WL V EEV G
Sbjct: 311 DAVGYLDIVVGWYAHWLPVMEEVIG 385
Score = 34.1 bits (68), Expect(3) = 1e-034
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEYARGLRHMLL 752
G +V P AW F A+D V+ +P DRLL + R LL
Sbjct: 383 GAGVVTDKELPLMKAWFDRFLAVDVVKAALPDRDRLLAANKARRDQLL 526
>gb|CW494651.1|CW494651 fsbb001f286a22k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f286a22, DNA
sequence
Length = 366
Score = 147 bits (316), Expect = 3e-034
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = +2 / +1
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A+PL L GSWASSYTHRVQLALRL+GLEFDY+EEDLGNKSDELLRHNPVH+KVPVLV GG
Sbjct: 157 ATPLKLVGSWASSYTHRVQLALRLRGLEFDYLEEDLGNKSDELLRHNPVHEKVPVLVRGG 336
Query: 263 RALPESVIIL 292
R LPES IIL
Sbjct: 337 RVLPESGIIL 366
>gb|AW677374.1|AW677374 DG1_6_A02.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 506
Score = 105 bits (223), Expect(2) = 8e-034
Identities = 39/75 (52%), Positives = 61/75 (81%)
Frame = +2 / +2
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ + G +AS ++HRV+ AL+LKG+ ++ ++EDL NKS+ LL NPVHKKVPVL+HG A
Sbjct: 38 PVKIIGHYASPFSHRVEAALQLKGVPYELIQEDLSNKSELLLTKNPVHKKVPVLLHGDLA 217
Query: 269 LPESVIILQYLDDAW 313
+ ES++I++Y+D+A+
Sbjct: 218 VCESLVIVEYIDEAF 262
Score = 61.1 bits (127), Expect(2) = 8e-034
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIESEL 496
+LPAD +DRA+ARFW +F D K + GE +A V++ ENLAL+E++L
Sbjct: 275 ILPADPYDRAMARFWTNFIDTKFFQPFWLAHWAEGEAXKAVVKEAKENLALLEAQL 442
>gb|CD463195.1|CD463195 ETH1_42_D08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_42_D08_A002 5', mRNA sequence
Length = 721
Score = 99.6 bits (211), Expect(4) = 2e-033
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G W+S + R ++AL LKGL + YVE+DL KS+ LL NPVH KVPVL+H GR +
Sbjct: 75 LKLLGVWSSPFVIRARVALNLKGLAYRYVEDDLNCKSELLLASNPVHTKVPVLLHDGRPV 254
Query: 272 PESVIILQYLDDAWPETRP 328
ES +I++Y+D+A+P P
Sbjct: 255 CESRVIVEYVDEAFPANGP 311
Score = 44.1 bits (90), Expect(4) = 2e-033
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +3 / +3
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEY 725
G ++D P AW F ALD VRE IP V RLLEY
Sbjct: 597 GVRVIDPAKTPLLAAWADRFAALDGVREVIPDVQRLLEY 713
Score = 32.7 bits (65), Expect(4) = 2e-033
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 341 DAFDRALARFWCHFADDKL 397
D + RA+ARFW + DDKL
Sbjct: 330 DPYRRAVARFWASYVDDKL 386
Score = 29.9 bits (59), Expect(4) = 2e-033
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGVR 616
D GL+DVVLG WL E + GVR
Sbjct: 525 DAAGLVDVVLGGFLGWLRASEVMCGVR 605
>gb|CW467395.1|CW467395 fsbb001f219b03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f219b03, DNA
sequence
Length = 603
Score = 116 bits (249), Expect(2) = 4e-033
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G +S + RV++AL L+GL ++Y+EEDLGNKSD LLR NPVHKKVPVL+ GGR +
Sbjct: 261 LRLLGKSSSPWVFRVRVALGLRGLSYEYIEEDLGNKSDLLLRSNPVHKKVPVLIDGGRPV 440
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES++ILQY+D+ W T P L
Sbjct: 441 CESLVILQYIDEIWRGTGPPL 503
Score = 46.9 bits (96), Expect(2) = 4e-033
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 326 PLLPADAFDRALARFWCHFADDKL 397
PLLPAD +DRA ARFW F DDK+
Sbjct: 498 PLLPADPYDRATARFWAAFVDDKV 569
>gb|CW141121.1|CW141121 104_532_11136149_116_34932_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136149, DNA
sequence
Length = 564
Score = 116 bits (249), Expect(2) = 4e-033
Identities = 48/81 (59%), Positives = 62/81 (76%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G +S + RV++AL L+GL ++Y+EEDLGNKSD LLR NPVHKKVPVL+ GGR +
Sbjct: 92 LRLLGKSSSPWVFRVRVALGLRGLSYEYIEEDLGNKSDLLLRSNPVHKKVPVLIDGGRPV 271
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES++ILQY+D+ W T P L
Sbjct: 272 CESLVILQYIDEIWRGTGPPL 334
Score = 46.9 bits (96), Expect(2) = 4e-033
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 326 PLLPADAFDRALARFWCHFADDKL 397
PLLPAD +DRA ARFW F DDK+
Sbjct: 329 PLLPADPYDRATARFWAAFVDDKV 400
>gb|CN129302.1|CN129302 RHOH1_34_D09.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_D09_A002 5', mRNA sequence
Length = 822
Score = 115 bits (245), Expect(2) = 1e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 63 LKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 242
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 243 CESQVILQYIDEAFAGTGPSL 305
Score = 46.9 bits (96), Expect(2) = 1e-032
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + DDK+ PA E+++A
Sbjct: 303 LLPADPYERAIARFWAAYIDDKMTPAWNKSTMGKTEEEKA 422
>gb|CD428130.1|CD428130 ETH1_32_C09.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_C09_A002 5', mRNA sequence
Length = 765
Score = 115 bits (245), Expect(2) = 1e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 93 LKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 272
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 273 CESQVILQYIDEAFAGTGPSL 335
Score = 46.9 bits (96), Expect(2) = 1e-032
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + DDK+ PA E+++A
Sbjct: 333 LLPADPYERAIARFWAAYIDDKMTPAWNKSTMGKTEEEKA 452
>gb|CN134649.1|CN134649 OX1_27_D04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_27_D04_A002 5', mRNA sequence
Length = 759
Score = 115 bits (245), Expect(2) = 1e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 74 LKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 253
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 254 CESQVILQYIDEAFAGTGPSL 316
Score = 46.9 bits (96), Expect(2) = 1e-032
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + DDK+ PA E+++A
Sbjct: 314 LLPADPYERAIARFWAAYIDDKMTPAWNKSTMGKTEEEKA 433
>gb|CX610774.1|CX610774 ANR1_20_F02.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_20_F02_A002 5', mRNA sequence
Length = 733
Score = 115 bits (245), Expect(2) = 1e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 66 LKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 245
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 246 CESQVILQYIDEAFAGTGPSL 308
Score = 46.9 bits (96), Expect(2) = 1e-032
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + DDK+ PA E+++A
Sbjct: 306 LLPADPYERAIARFWAAYIDDKMTPAWNKSTMGKTEEEKA 425
>gb|CD430702.1|CD430702 ETH1_20_G03.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_20_G03_A002 5', mRNA sequence
Length = 600
Score = 115 bits (245), Expect(2) = 1e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 95 LKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 274
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 275 CESQVILQYIDEAFAGTGPSL 337
Score = 46.9 bits (96), Expect(2) = 1e-032
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + DDK+ PA E+++A
Sbjct: 335 LLPADPYERAIARFWAAYIDDKMTPAWNKSTMGKTEEEKA 454
>gb|CW190530.1|CW190530 104_612_11174553_148_36834_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174553, DNA
sequence
Length = 655
Score = 142 bits (304), Expect = 1e-032
Identities = 56/101 (55%), Positives = 74/101 (73%)
Frame = +2 / +2
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHG 259
A + + G WAS RV+ ALRLKG+E++YV+EDL NKS +LLR+NPV KKVPVLVH
Sbjct: 353 AEKGVKVLGMWASPMVIRVEWALRLKGVEYEYVDEDLANKSADLLRYNPVTKKVPVLVHD 532
Query: 260 GRALPESVIILQYLDDAWPETRPLLPADAFDRALARFWCHF 382
G + ES II++Y+D+AW P++PAD ++RA ARFW F
Sbjct: 533 GNPIAESTIIVEYIDEAWKGGYPIMPADPYERAQARFWARF 655
>gb|CN143625.1|CN143625 WOUND1_17_A02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_17_A02_A002 5', mRNA sequence
Length = 831
Score = 114 bits (244), Expect(2) = 2e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 79 LHLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 258
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 259 CESQVILQYIDEAFAGTGPSL 321
Score = 46.9 bits (96), Expect(2) = 2e-032
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + DDK+ PA E+++A
Sbjct: 319 LLPADPYERAIARFWAAYIDDKMTPAWNKSTMGKTEEEKA 438
>gb|CN149574.1|CN149574 WOUND1_63_D02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_D02_A002 5', mRNA sequence
Length = 741
Score = 115 bits (245), Expect(2) = 2e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 75 LKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 254
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 255 CESQVILQYIDEAFAGTGPSL 317
Score = 46.4 bits (95), Expect(2) = 2e-032
Identities = 18/40 (45%), Positives = 26/40 (65%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
LLPAD ++RA+ARFW + DDK+ PA E+++A
Sbjct: 315 LLPADPYERAVARFWAAYIDDKMTPAWNKSTMGKTEEEKA 434
>gb|CN134135.1|CN134135 OX1_20_B02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_20_B02_A002 5', mRNA sequence
Length = 687
Score = 99.6 bits (211), Expect(4) = 2e-032
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +2 / +3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G W+S + R ++AL LKGL + YVE+DL KS+ LL NPVH KVPVL+H GR +
Sbjct: 39 LKLLGVWSSPFVIRARVALNLKGLAYRYVEDDLNCKSELLLASNPVHTKVPVLLHDGRPV 218
Query: 272 PESVIILQYLDDAWPETRP 328
ES +I++Y+D+A+P P
Sbjct: 219 CESRVIVEYVDEAFPANGP 275
Score = 44.1 bits (90), Expect(4) = 2e-032
Identities = 20/39 (51%), Positives = 22/39 (56%)
Frame = +3 / +2
Query: 609 GCALVDADAFPRFHAWLRDFEALDEVRETIPAVDRLLEY 725
G ++D P AW F ALD VRE IP V RLLEY
Sbjct: 563 GVRVIDPAKTPLLAAWADRFAALDGVREVIPDVQRLLEY 679
Score = 32.7 bits (65), Expect(4) = 2e-032
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2 / +3
Query: 341 DAFDRALARFWCHFADDKL 397
D + RA+ARFW + DDKL
Sbjct: 294 DPYRRAVARFWASYVDDKL 350
Score = 25.8 bits (50), Expect(4) = 2e-032
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTG 610
D GL+DVVLG WL E + G
Sbjct: 490 DAAGLVDVVLGGFLGWLRASEVMCG 564
>gb|CD225294.1|CD225294 CCC1_39_A01.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_39_A01_A007 5', mRNA sequence
Length = 667
Score = 106 bits (227), Expect(2) = 2e-032
Identities = 44/102 (43%), Positives = 66/102 (64%)
Frame = +2 / +2
Query: 23 ILSVRQ*AMEKTSESAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKS 202
+LSV + E + + + + G W S + RV +AL+LKG+E++ VEE +G KS
Sbjct: 47 VLSVEAVELSPGQEL*TKMSEADVRVIGLWPSPFVIRVLIALKLKGVEYELVEEVVGKKS 226
Query: 203 DELLRHNPVHKKVPVLVHGGRALPESVIILQYLDDAWPETRP 328
+ LLR NPVHKK+PVL+H G+ + ES+II+QY+D+ W P
Sbjct: 227 ELLLRSNPVHKKIPVLLHHGKPISESLIIVQYIDEVWSSDTP 352
Score = 54.2 bits (112), Expect(2) = 2e-032
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIE 487
LLPAD + RA+ RFW + DDKL PA+ + + G ++ A Q+ L L+E
Sbjct: 359 LLPADPYTRAVHRFWAQYVDDKLPPAIRILRGTDGGGKDEAAEQLSAALQLLE 517
>gb|CD222247.1|CD222247 CCC1_2_A06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_A06_A007 5', mRNA sequence
Length = 658
Score = 106 bits (227), Expect(2) = 2e-032
Identities = 44/102 (43%), Positives = 66/102 (64%)
Frame = +2 / +3
Query: 23 ILSVRQ*AMEKTSESAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKS 202
+LSV + E + + + + G W S + RV +AL+LKG+E++ VEE +G KS
Sbjct: 54 VLSVEAVELSPGQEL*TKMSEADVRVIGLWPSPFVIRVLIALKLKGVEYELVEEVVGKKS 233
Query: 203 DELLRHNPVHKKVPVLVHGGRALPESVIILQYLDDAWPETRP 328
+ LLR NPVHKK+PVL+H G+ + ES+II+QY+D+ W P
Sbjct: 234 ELLLRSNPVHKKIPVLLHHGKPISESLIIVQYIDEVWSSDTP 359
Score = 54.2 bits (112), Expect(2) = 2e-032
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIE 487
LLPAD + RA+ RFW + DDKL PA+ + + G ++ A Q+ L L+E
Sbjct: 366 LLPADPYTRAVHRFWAQYVDDKLPPAIRILRGTDGGGKDEAAEQLSAALQLLE 524
>gb|CD222182.1|CD222182 CCC1_2_E09.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_2_E09_A007 5', mRNA sequence
Length = 645
Score = 106 bits (227), Expect(2) = 2e-032
Identities = 44/102 (43%), Positives = 66/102 (64%)
Frame = +2 / +3
Query: 23 ILSVRQ*AMEKTSESAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKS 202
+LSV + E + + + + G W S + RV +AL+LKG+E++ VEE +G KS
Sbjct: 42 VLSVEAVELSPGQEL*TKMSEADVRVIGLWPSPFVIRVLIALKLKGVEYELVEEVVGKKS 221
Query: 203 DELLRHNPVHKKVPVLVHGGRALPESVIILQYLDDAWPETRP 328
+ LLR NPVHKK+PVL+H G+ + ES+II+QY+D+ W P
Sbjct: 222 ELLLRSNPVHKKIPVLLHHGKPISESLIIVQYIDEVWSSDTP 347
Score = 54.2 bits (112), Expect(2) = 2e-032
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIE 487
LLPAD + RA+ RFW + DDKL PA+ + + G ++ A Q+ L L+E
Sbjct: 354 LLPADPYTRAVHRFWAQYVDDKLPPAIRILRGTDGGGKDEAAEQLSAALQLLE 512
>gb|BE358825.1|BE358825 DG1_32_D11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 427
Score = 115 bits (245), Expect(2) = 2e-032
Identities = 48/81 (59%), Positives = 61/81 (75%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G WAS Y RV+LAL LKGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ +
Sbjct: 82 LKLLGMWASPYVLRVKLALSLKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPV 261
Query: 272 PESVIILQYLDDAWPETRPLL 334
ES +ILQY+D+A+ T P L
Sbjct: 262 CESQVILQYIDEAFAGTGPSL 324
Score = 46.0 bits (94), Expect(2) = 2e-032
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPA 406
LLPAD ++RA+ARFW + DDK+ PA
Sbjct: 322 LLPADPYERAIARFWAAYIDDKMTPA 399
>gb|BE358056.1|BE358056 DG1_24_E12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 597
Score = 105 bits (224), Expect(2) = 6e-032
Identities = 40/77 (51%), Positives = 57/77 (74%)
Frame = +2 / +2
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
+ G W S + RV +AL+LKG+E++ VEE +G KS+ LLR NPVHKK+PVL+H G+ + E
Sbjct: 71 VIGLWPSPFVIRVLIALKLKGVEYELVEEVVGKKSELLLRSNPVHKKIPVLLHHGKPISE 250
Query: 278 SVIILQYLDDAWPETRP 328
S+II+QY+D+ W P
Sbjct: 251 SLIIVQYIDEVWSSDTP 301
Score = 54.2 bits (112), Expect(2) = 6e-032
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAAVRQVHENLALIE 487
LLPAD + RA+ RFW + DDKL PA+ + + G ++ A Q+ L L+E
Sbjct: 308 LLPADPYTRAVHRFWAQYVDDKLPPAIRILRGTDGGGKDEAAEQLSAALQLLE 466
>gb|CN125978.1|CN125978 RHOH1_14_A10.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_14_A10_A002 5', mRNA sequence
Length = 760
Score = 110 bits (234), Expect(3) = 8e-032
Identities = 42/87 (48%), Positives = 65/87 (74%)
Frame = +2 / +3
Query: 53 KTSESAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVH 232
+ SE + + L GS+AS + HR ++ALRLKG+ ++ + EDL NKS+ LL+HNPVH
Sbjct: 63 RRSEEMATTEPAAVRLIGSFASPFVHRAEVALRLKGVPYELILEDLSNKSELLLQHNPVH 242
Query: 233 KKVPVLVHGGRALPESVIILQYLDDAW 313
K VPVL+HG RA+ ES+++++Y+D+A+
Sbjct: 243 KLVPVLLHGDRAISESLVVVEYVDEAF 323
Score = 36.3 bits (73), Expect(3) = 8e-032
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2 / +3
Query: 326 PLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAA 451
PLLPA RA ARFW +F D K F + E+++ A
Sbjct: 333 PLLPAAPHARADARFWANFIDQKFARPFWMSFWTDDEERKKA 458
Score = 30.9 bits (61), Expect(3) = 8e-032
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2 / +3
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D +G +D+ ++W+ V EEVTGV
Sbjct: 531 DAIGFVDIAACGLAHWVGVIEEVTGV 608
>gb|BF421398.1|BF421398 FM1_8_D04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 508
Score = 114 bits (244), Expect(2) = 2e-031
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G W S Y +RVQ+ L LKGL ++YVEEDL NKS+ LL+ NPVHKKVPVL+H G+ +
Sbjct: 14 LKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLKSNPVHKKVPVLIHDGKPI 193
Query: 272 PESVIILQYLDDAWPETRP 328
ES +I+QYLD+ + T P
Sbjct: 194 AESEVIVQYLDEVFAGTGP 250
Score = 43.7 bits (89), Expect(2) = 2e-031
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
+LPAD + RA ARFW F DDK+G T+ + +++A
Sbjct: 254 VLPADPYGRATARFWAAFVDDKVGSPWHTILFAREAEKKA 373
>gb|CW226157.1|CW226157 104_664_11204738_148_37217_013 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204738, DNA
sequence
Length = 647
Score = 114 bits (243), Expect(2) = 2e-031
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +2 / -3
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G W S Y +RVQ+ L LKGL ++YVEEDL NKS+ LL+ NPVHKKVPVL+H G+ +
Sbjct: 405 LKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLQSNPVHKKVPVLIHDGKPI 226
Query: 272 PESVIILQYLDDAWPETRP 328
ES +I+QYLD+ + T P
Sbjct: 225 AESQVIVQYLDEVFAGTGP 169
Score = 43.7 bits (89), Expect(2) = 2e-031
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +2 / -3
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
+LPAD + RA ARFW F DDK+G T+ + +++A
Sbjct: 165 VLPADPYGRATARFWAAFVDDKVGSPWHTILFAREAEKKA 46
>gb|CW304182.1|CW304182 104_789_11465646_148_35708_031 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465646, DNA
sequence
Length = 701
Score = 111 bits (238), Expect(2) = 3e-031
Identities = 42/75 (56%), Positives = 63/75 (84%)
Frame = +2 / +3
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ + G +AS ++HRV+ AL+LKG+ ++ +EEDL NKS+ LL +NPVHKKVPVL+HG RA
Sbjct: 330 PVKIIGHYASPFSHRVEAALQLKGVPYELIEEDLSNKSELLLANNPVHKKVPVLLHGDRA 509
Query: 269 LPESVIILQYLDDAW 313
+ ES++I+QY+D+A+
Sbjct: 510 ICESLVIVQYVDEAF 554
Score = 45.5 bits (93), Expect(2) = 3e-031
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / +3
Query: 326 PLLPADAFDRALARFWCHFADDKL 397
PLLPAD +DRA+ARFW F D K+
Sbjct: 564 PLLPADPYDRAMARFWADFIDSKV 635
>gb|CW067572.1|CW067572 104_315_10524361_114_30124 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10524361, DNA
sequence
Length = 685
Score = 111 bits (238), Expect(2) = 3e-031
Identities = 42/75 (56%), Positives = 63/75 (84%)
Frame = +2 / -2
Query: 89 PLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRA 268
P+ + G +AS ++HRV+ AL+LKG+ ++ +EEDL NKS+ LL +NPVHKKVPVL+HG RA
Sbjct: 600 PVKIIGHYASPFSHRVEAALQLKGVPYELIEEDLSNKSELLLANNPVHKKVPVLLHGDRA 421
Query: 269 LPESVIILQYLDDAW 313
+ ES++I+QY+D+A+
Sbjct: 420 ICESLVIVQYVDEAF 376
Score = 45.5 bits (93), Expect(2) = 3e-031
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / -2
Query: 326 PLLPADAFDRALARFWCHFADDKL 397
PLLPAD +DRA+ARFW F D K+
Sbjct: 366 PLLPADPYDRAMARFWADFIDSKV 295
>gb|CD463985.1|CD463985 ETH1_47_F10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_47_F10_A002 5', mRNA sequence
Length = 598
Score = 101 bits (215), Expect(3) = 4e-031
Identities = 41/72 (56%), Positives = 55/72 (76%)
Frame = +2 / +1
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G S + RV +AL +KG+ F+YVEEDL NKS+ LL+ NPVHKKVPVL+H G+ +
Sbjct: 97 LKLLGLQLSPFVIRVCMALTMKGVSFEYVEEDLNNKSELLLKSNPVHKKVPVLIHNGKPI 276
Query: 272 PESVIILQYLDD 307
ES++ILQY+D+
Sbjct: 277 CESLVILQYVDE 312
Score = 49.6 bits (102), Expect(3) = 4e-031
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +2 / +1
Query: 323 RPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
R +LPAD F+RA ARFW + DDKL PA + + E++ A
Sbjct: 325 RSILPADPFERATARFWAAYVDDKLFPAWYGMVKAQAEEERA 450
Score = 24.0 bits (46), Expect(3) = 4e-031
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 536 DEVGLLDVVLGCGSYW 583
D +G +D+VLG +W
Sbjct: 544 DSIGYVDIVLGSFLFW 591
>gb|BF421185.1|BF421185 FM1_6_E04.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 440
Score = 114 bits (244), Expect(2) = 4e-031
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +2 / +2
Query: 92 LMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRAL 271
L L G W S Y +RVQ+ L LKGL ++YVEEDL NKS+ LL+ NPVHKKVPVL+H G+ +
Sbjct: 14 LKLLGVWDSPYVNRVQIVLNLKGLSYEYVEEDLLNKSELLLKSNPVHKKVPVLIHDGKPI 193
Query: 272 PESVIILQYLDDAWPETRP 328
ES +I+QYLD+ + T P
Sbjct: 194 AESEVIVQYLDEVFAGTGP 250
Score = 42.3 bits (86), Expect(2) = 4e-031
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTV 418
+LPAD + RA ARFW F DDK+G T+
Sbjct: 254 VLPADPYGRATARFWAAFVDDKVGSPWHTI 343
>gb|CN145377.1|CN145377 WOUND1_28_C01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_C01_A002 5', mRNA sequence
Length = 515
Score = 114 bits (243), Expect(2) = 6e-031
Identities = 46/78 (58%), Positives = 60/78 (76%)
Frame = +2 / +1
Query: 83 ASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGG 262
A L L G+W S + +RV++AL KGLE++ VEEDL NKSD+LL NPVHKKVPVL+HG
Sbjct: 40 AGKLKLLGAWPSPFVNRVRVALHFKGLEYENVEEDLTNKSDQLLASNPVHKKVPVLLHGD 219
Query: 263 RALPESVIILQYLDDAWP 316
+ ES++I +YLDDA+P
Sbjct: 220 TPVSESLVIGEYLDDAFP 273
Score = 42.3 bits (86), Expect(2) = 6e-031
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAA 451
LLPAD ++RA+ARFW + D KL + E++ AA
Sbjct: 289 LLPADPYERAVARFWAAYVDGKLHGMMVKAILGATEEERAA 411
>gb|CX609701.1|CX609701 ANR1_14_F01.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_14_F01_A002 3', mRNA sequence
Length = 761
Score = 106 bits (226), Expect(4) = 7e-031
Identities = 39/70 (55%), Positives = 59/70 (84%)
Frame = +2 / +2
Query: 104 GSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPESV 283
GS+AS + HR ++ALRLKG+ ++ + EDL NKS+ LL+HNPVHK VPVL+HG RA+ ES+
Sbjct: 2 GSFASPFVHRAEVALRLKGVPYELILEDLSNKSELLLQHNPVHKLVPVLLHGDRAISESL 181
Query: 284 IILQYLDDAW 313
++++Y+D+A+
Sbjct: 182 VVVEYVDEAF 211
Score = 36.3 bits (73), Expect(4) = 7e-031
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2 / +2
Query: 326 PLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEAA 451
PLLPA RA ARFW +F D K F + E+++ A
Sbjct: 221 PLLPAAPHARADARFWANFIDQKFARPFWMSFWTDDEERKKA 346
Score = 30.9 bits (61), Expect(4) = 7e-031
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 536 DEVGLLDVVLGCGSYWLAVFEEVTGV 613
D +G +D+ ++W+ V EEVTGV
Sbjct: 419 DAIGFVDIAACGLAHWVGVIEEVTGV 496
Score = 24.0 bits (46), Expect(4) = 7e-031
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2 / +3
Query: 965 RACACRRPGLECGS 1006
R C C PGL C S
Sbjct: 621 RRCTCCEPGLLCAS 662
>gb|CF427419.1|CF427419 PH1_1_A12.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_1_A12_A002 5', mRNA sequence
Length = 611
Score = 117 bits (250), Expect(2) = 1e-030
Identities = 48/91 (52%), Positives = 67/91 (73%)
Frame = +2 / +1
Query: 44 AMEKTSESAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHN 223
A + + +A A L L G+W S + +RV++AL LKGLE++ VEEDL N+SD+LL N
Sbjct: 97 ARTRMATTAGAGGAGKLKLLGAWPSPFVNRVRVALHLKGLEYENVEEDLTNRSDQLLASN 276
Query: 224 PVHKKVPVLVHGGRALPESVIILQYLDDAWP 316
PVHKKVPVL+HG + ES++I++YLDDA+P
Sbjct: 277 PVHKKVPVLLHGDTPVSESLVIVEYLDDAFP 369
Score = 38.2 bits (77), Expect(2) = 1e-030
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2 / +1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLPAD ++RA+ARFW + D K+
Sbjct: 385 LLPADPYERAVARFWAAYVDGKV 453
>gb|CN141311.1|CN141311 OX1_50_E02.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_50_E02_A002 5', mRNA sequence
Length = 490
Score = 90.4 bits (191), Expect(3) = 1e-030
Identities = 34/54 (62%), Positives = 44/54 (81%)
Frame = +2 / +2
Query: 152 LKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPESVIILQYLDDAW 313
L +++YVEEDL KSD LLR NPVHKKVPVL+HGGR + ES++I+QY+D+ W
Sbjct: 137 LSSYDYEYVEEDLFGKSDLLLRSNPVHKKVPVLIHGGRPVCESLVIVQYVDETW 298
Score = 48.3 bits (99), Expect(3) = 1e-030
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = +2 / +2
Query: 320 TRPLLPADAFDRALARFWCHFADDKLGPAVGTVFASTGEDQEA 448
T PLLPADA DRA ARFW + DDK A +F ST ++ A
Sbjct: 317 TPPLLPADAHDRATARFWAAYIDDKYILAWRQLFWSTTAEKIA 445
Score = 34.5 bits (69), Expect(3) = 1e-030
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = +2 / +2
Query: 80 AASPLMLFGSWASSYTHRVQLALRLKGL 163
A L L GSW S Y R ++AL LKGL
Sbjct: 56 AGGELQLLGSWYSPYVVRAKVALGLKGL 139
>gb|CW141974.1|CW141974 104_533_11136596_148_34941_078 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11136596, DNA
sequence
Length = 674
Score = 118 bits (253), Expect(2) = 1e-030
Identities = 49/91 (53%), Positives = 67/91 (73%)
Frame = +2 / +2
Query: 44 AMEKTSESAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHN 223
A + + +A A L L G+W S + +RV++AL LKGLE++ VEEDL NKSD+LL N
Sbjct: 197 ARTRMATTAGAGGAGKLKLLGAWPSPFVNRVRVALHLKGLEYENVEEDLTNKSDQLLASN 376
Query: 224 PVHKKVPVLVHGGRALPESVIILQYLDDAWP 316
PVHKKVPVL+HG + ES++I++YLDDA+P
Sbjct: 377 PVHKKVPVLLHGDTPVSESLVIVEYLDDAFP 469
Score = 36.3 bits (73), Expect(2) = 1e-030
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = +2 / +2
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLPAD ++RA+ARFW + D ++
Sbjct: 485 LLPADPYERAVARFWAAYVDGQV 553
>gb|BG557514.1|BG557514 EM1_54_B10.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 521
Score = 116 bits (247), Expect(2) = 3e-030
Identities = 48/91 (52%), Positives = 66/91 (72%)
Frame = +2 / +3
Query: 44 AMEKTSESAIPPAASPLMLFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHN 223
A + + +A A L L G+W S + +RV++AL LKGLE++ VEEDL NKSD+LL N
Sbjct: 45 ARTRMATTAGAGGAGKLKLLGAWPSPFVNRVRVALHLKGLEYENVEEDLTNKSDQLLASN 224
Query: 224 PVHKKVPVLVHGGRALPESVIILQYLDDAWP 316
PVHKK PVL+HG + ES++I++YLDDA+P
Sbjct: 225 PVHKKEPVLLHGDTPVSESLVIVEYLDDAFP 317
Score = 38.2 bits (77), Expect(2) = 3e-030
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLPAD ++RA+ARFW + D K+
Sbjct: 333 LLPADPYERAVARFWAAYVDGKV 401
>gb|CW023422.1|CW023422 104_163_10432441_1_30001 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10432441, DNA
sequence
Length = 356
Score = 107 bits (229), Expect(2) = 5e-030
Identities = 41/70 (58%), Positives = 60/70 (85%)
Frame = +2 / +2
Query: 104 GSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPESV 283
G +AS ++HRV+ AL+LKG+ ++ +EEDL NKS+ LL +NPVHKKVPVL+HG RA+ ES+
Sbjct: 5 GHYASPFSHRVEAALQLKGVPYELIEEDLSNKSELLLANNPVHKKVPVLLHGDRAICESL 184
Query: 284 IILQYLDDAW 313
+I+QY+D+A+
Sbjct: 185 VIVQYVDEAF 214
Score = 45.5 bits (93), Expect(2) = 5e-030
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 326 PLLPADAFDRALARFWCHFADDKL 397
PLLPAD +DRA+ARFW F D K+
Sbjct: 224 PLLPADPYDRAMARFWADFIDSKV 295
>gb|BZ626753.1|BZ626753 ih48b09.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih48b09 5', DNA sequence
Length = 785
Score = 111 bits (236), Expect(2) = 1e-029
Identities = 46/79 (58%), Positives = 59/79 (74%)
Frame = +2 / -1
Query: 98 LFGSWASSYTHRVQLALRLKGLEFDYVEEDLGNKSDELLRHNPVHKKVPVLVHGGRALPE 277
L G WAS Y RV+LAL KGL ++YVEEDL +KS+ LL+ NPVH KVPVL+H G+ + E
Sbjct: 782 LLGMWASPYVLRVKLALSSKGLSYEYVEEDLRDKSELLLKSNPVHSKVPVLIHNGKPVCE 603
Query: 278 SVIILQYLDDAWPETRPLL 334
S +ILQY+D+A+ T P L
Sbjct: 602 SQVILQYIDEAFAGTGPSL 546
Score = 41.4 bits (84), Expect(2) = 1e-029
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2 / -1
Query: 329 LLPADAFDRALARFWCHFADDKL 397
LLPAD ++RA+ARFW + DDK+
Sbjct: 548 LLPADPYERAIARFWAAYIDDKV 480
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,153,826,366
Number of Sequences: 832831
Number of extensions: 15843586
Number of successful extensions: 250019
Number of sequences better than 1.0e-020: 184
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 42759027300
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)