TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493976.2.1
(1294 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stres... 212 e-108
gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation... 243 1e-087
gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) So... 324 2e-087
gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-defic... 185 1e-086
gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots S... 212 1e-086
gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stres... 209 4e-083
gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorgh... 256 7e-083
gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-defic... 161 1e-082
gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle... 185 2e-082
gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed see... 209 8e-077
gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum p... 180 5e-075
gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation... 256 8e-074
gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedl... 196 4e-073
gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorgh... 243 1e-071
gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorgh... 243 1e-071
gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots ... 198 5e-070
gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkali... 155 3e-069
gb|BG556323.1|BG556323 EM1_68_E09.g1_A002 Embryo 1 (EM1) So... 177 5e-068
gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorgh... 155 1e-067
gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle... 190 2e-067
gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves... 170 2e-067
gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation... 256 5e-067
gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-defic... 155 2e-062
gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves... 156 5e-062
gb|BG355810.1|BG355810 EM1_17_A05.g1_A002 Embryo 1 (EM1) So... 154 6e-061
gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorgh... 233 5e-060
gb|CL177979.1|CL177979 104_385_10894229_148_31913_293 Sorgh... 147 6e-059
gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorgh... 113 8e-059
gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassino... 146 5e-058
gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorgh... 113 5e-058
gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation... 104 1e-057
gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorg... 138 2e-057
gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) So... 144 2e-057
gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2)... 144 2e-057
gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) So... 221 3e-057
gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed see... 140 2e-056
gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorgh... 108 8e-056
gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves... 133 1e-055
gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1... 138 1e-055
gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorgh... 215 1e-054
gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkal... 110 2e-054
gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) So... 209 2e-053
gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorgh... 145 2e-053
gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) So... 179 2e-053
gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorgh... 104 8e-053
gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation... 115 4e-052
gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorgh... 135 7e-052
gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stres... 204 1e-051
gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation... 110 2e-051
gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sor... 204 3e-051
gb|CN139871.1|CN139871 OX1_24_D09.g1_A002 Oxidatively-stres... 125 5e-051
gb|CW221659.1|CW221659 104_656_11198028_148_37170_034 Sorgh... 203 6e-051
gb|CW371631.1|CW371631 fsbb001f047d01f0 Sorghum methylation... 135 6e-051
gb|CW348697.1|CW348697 fsbb001f009c21f0 Sorghum methylation... 115 7e-050
gb|CD432827.1|CD432827 ETH1_33_A06.g1_A002 Ethylene-treated... 118 1e-049
gb|CL171843.1|CL171843 104_374_10889716_116_31775_004 Sorgh... 198 1e-049
gb|CW318660.1|CW318660 104_811_11474070_116_35879_031 Sorgh... 133 3e-049
gb|BI245987.1|BI245987 IP1_66_C05.b1_A002 Immature pannicle... 109 3e-049
gb|CX607108.1|CX607108 ANR1_6_F04.g1_A002 Anaerobic roots S... 141 4e-049
gb|CW416746.1|CW416746 fsbb001f117h02f0 Sorghum methylation... 110 9e-049
gb|CW355038.1|CW355038 fsbb001f019i03k0 Sorghum methylation... 135 1e-048
gb|CW126910.1|CW126910 104_507_11113147_148_34730_068 Sorgh... 195 1e-048
gb|CW038342.1|CW038342 104_270_10504868_115_30386 Sorghum m... 135 1e-048
gb|AW564506.1|AW564506 LG1_295_D10.b1_A002 Light Grown 1 (L... 133 3e-048
gb|CL192764.1|CL192764 104_415_10940470_114_32264_081 Sorgh... 109 1e-047
gb|CW204510.1|CW204510 104_632_11186581_116_37060_055 Sorgh... 124 2e-047
gb|BG355480.1|BG355480 EM1_17_A05.b1_A002 Embryo 1 (EM1) So... 189 2e-047
gb|CW448128.1|CW448128 fsbb001f181j14k0 Sorghum methylation... 147 2e-047
gb|CW107276.1|CW107276 104_477_11096492_148_34473_074 Sorgh... 190 5e-047
gb|CW306553.1|CW306553 104_792_11466904_148_35716_060 Sorgh... 108 7e-047
gb|CW487002.1|CW487002 fsbb001f252j13f0 Sorghum methylation... 108 2e-046
gb|CW330582.1|CW330582 104_827_11480451_116_36011_006 Sorgh... 115 3e-046
gb|BG463957.1|BG463957 EM1_52_H10.b1_A002 Embryo 1 (EM1) So... 103 5e-046
gb|CW214760.1|CW214760 104_646_11194182_116_37049_017 Sorgh... 95 1e-045
gb|CW318661.1|CW318661 104_811_11474070_148_35883_031 Sorgh... 121 3e-045
gb|CW143277.1|CW143277 104_535_11137329_148_34958_047 Sorgh... 121 3e-045
gb|CW075931.1|CW075931 104_363_10809810_116_31801_258 Sorgh... 121 3e-045
gb|CW029128.1|CW029128 104_256_10499499_114_30399 Sorghum m... 135 4e-045
gb|CW038341.1|CW038341 104_270_10504868_114_30385 Sorghum m... 121 5e-045
gb|CW075930.1|CW075930 104_363_10809810_114_31800_258 Sorgh... 120 9e-045
gb|CL172101.1|CL172101 104_374_10889911_148_31774_199 Sorgh... 117 2e-044
gb|CW030261.1|CW030261 104_258_10500149_114_30403 Sorghum m... 119 2e-044
gb|BG412450.1|BG412450 OV2_34_C12.g1_A002 Ovary 2 (OV2) Sor... 153 3e-044
gb|CX616057.1|CX616057 GABR1_25_C11.g1_A002 GA- or brassino... 110 6e-044
gb|CN137045.1|CN137045 OX1_54_H01.g1_A002 Oxidatively-stres... 110 8e-044
gb|CN134486.1|CN134486 OX1_26_D09.g1_A002 Oxidatively-stres... 100 2e-043
gb|BE917670.1|BE917670 OV1_6_F07.g1_A002 Ovary 1 (OV1) Sorg... 121 2e-043
gb|CW059494.1|CW059494 104_302_10519350_114_30165 Sorghum m... 121 2e-043
gb|CW386714.1|CW386714 fsbb001f070m01f0 Sorghum methylation... 112 1e-042
gb|CW340688.1|CW340688 104_841_11485928_148_36148_018 Sorgh... 71 3e-042
gb|CN146336.1|CN146336 WOUND1_39_D07.g1_A002 Wounded leaves... 131 6e-042
gb|CW174639.1|CW174639 104_586_11157513_148_36559_033 Sorgh... 110 2e-041
gb|CN151243.1|CN151243 WOUND1_74_G01.b1_A002 Wounded leaves... 121 2e-041
gb|CX610991.1|CX610991 ANR1_22_B08.b1_A002 Anaerobic roots ... 121 6e-041
gb|CL174843.1|CL174843 104_379_10891942_148_31768_310 Sorgh... 101 1e-040
gb|BG322950.1|BG322950 EM1_13_B01.g1_A002 Embryo 1 (EM1) So... 84 2e-040
gb|CW027693.1|CW027693 104_254_10498658_114_30395 Sorghum m... 96 9e-040
gb|BG464039.1|BG464039 EM1_52_H10.g1_A002 Embryo 1 (EM1) So... 121 4e-039
gb|CN127089.1|CN127089 RHOH1_21_B02.b1_A002 Acid- and alkal... 110 5e-039
gb|CW379038.1|CW379038 fsbb001f058b16f0 Sorghum methylation... 106 6e-039
gb|AW671351.1|AW671351 LG1_335_D11.b1_A002 Light Grown 1 (L... 86 6e-039
gb|CW220362.1|CW220362 104_655_11197308_148_37155_048 Sorgh... 105 1e-038
gb|CW220361.1|CW220361 104_655_11197308_116_37156_048 Sorgh... 105 1e-038
gb|CW204094.1|CW204094 104_632_11186356_148_36919_016 Sorgh... 104 1e-038
gb|CW136107.1|CW136107 104_521_11118204_116_34845_048 Sorgh... 161 2e-038
gb|CW362025.1|CW362025 fsbb001f030o09f0 Sorghum methylation... 100 6e-038
gb|CW330583.1|CW330583 104_827_11480451_148_36012_006 Sorgh... 115 7e-038
gb|CW473161.1|CW473161 fsbb001f228g21f0 Sorghum methylation... 114 2e-037
gb|CW481549.1|CW481549 fsbb001f241d06f0 Sorghum methylation... 100 2e-037
gb|CW306552.1|CW306552 104_792_11466904_116_35712_060 Sorgh... 93 4e-037
gb|CW231485.1|CW231485 104_680_11211147_116_37343_004 Sorgh... 103 6e-037
gb|CW471322.1|CW471322 fsbb001f225c11f0 Sorghum methylation... 156 7e-037
gb|CW449996.1|CW449996 fsbb001f188g15k0 Sorghum methylation... 108 8e-037
gb|CW045316.1|CW045316 104_281_10509483_114_30236 Sorghum m... 106 1e-036
gb|CL172100.1|CL172100 104_374_10889911_116_31775_199 Sorgh... 84 4e-036
gb|CX607022.1|CX607022 ANR1_6_F04.b1_A002 Anaerobic roots S... 95 5e-036
gb|CW204093.1|CW204093 104_632_11186356_116_36920_016 Sorgh... 105 5e-036
gb|CF429142.1|CF429142 PH1_20_C06.b1_A002 Phosphorous-defic... 96 1e-035
gb|BZ341425.1|BZ341425 ic45c08.b1 WGS-SbicolorF (JM107 adap... 95 1e-035
gb|BE360794.1|BE360794 DG1_67_C05.b2_A002 Dark Grown 1 (DG1... 86 3e-035
gb|CN146258.1|CN146258 WOUND1_39_D07.b1_A002 Wounded leaves... 92 5e-035
gb|CW230206.1|CW230206 104_671_11207725_116_37267_049 Sorgh... 149 1e-034
gb|CL159581.1|CL159581 104_349_10804357_116_31382_181 Sorgh... 67 5e-034
gb|CW471323.1|CW471323 fsbb001f225c11k0 Sorghum methylation... 72 1e-033
gb|BG047611.1|BG047611 OV1_26_A06.b1_A002 Ovary 1 (OV1) Sor... 108 1e-033
gb|CW067086.1|CW067086 104_314_10524055_114_30126 Sorghum m... 83 1e-033
gb|CW381842.1|CW381842 fsbb001f063g24k0 Sorghum methylation... 144 3e-033
gb|CW340687.1|CW340687 104_841_11485928_116_36149_018 Sorgh... 71 6e-033
gb|AW286643.1|AW286643 LG1_335_D11.g1_A002 Light Grown 1 (L... 114 1e-032
gb|CN141202.1|CN141202 OX1_50_A06.b1_A002 Oxidatively-stres... 142 1e-032
gb|CW122718.1|CW122718 104_501_11110823_148_34673_084 Sorgh... 84 3e-032
gb|BG557781.1|BG557781 EM1_53_A06.b1_A002 Embryo 1 (EM1) So... 105 3e-032
gb|CW482801.1|CW482801 fsbb001f244b09f0 Sorghum methylation... 79 2e-031
gb|BG412749.1|BG412749 OV2_34_C12.b1_A002 Ovary 2 (OV2) Sor... 98 2e-031
gb|CW135331.1|CW135331 104_519_11117788_148_34827_002 Sorgh... 105 6e-031
gb|CW294638.1|CW294638 104_775_11415292_148_36234_006 Sorgh... 73 7e-031
gb|CW372792.1|CW372792 fsbb001f048n17k0 Sorghum methylation... 90 1e-030
gb|CW136108.1|CW136108 104_521_11118204_148_34841_048 Sorgh... 79 1e-030
gb|CX606996.1|CX606996 ANR1_6_C12.b1_A002 Anaerobic roots S... 121 2e-030
gb|BG240827.1|BG240827 OV1_38_G09.g1_A002 Ovary 1 (OV1) Sor... 103 3e-030
gb|CF429677.1|CF429677 PH1_23_G06.g1_A002 Phosphorous-defic... 100 4e-030
gb|BG052938.1|BG052938 RHIZ2_15_B11.b1_A003 Rhizome2 (RHIZ2... 105 4e-030
gb|BG102282.1|BG102282 RHIZ2_24_D04.b1_A003 Rhizome2 (RHIZ2... 100 4e-030
gb|CW170395.1|CW170395 104_580_11155184_148_36515_020 Sorgh... 79 7e-030
gb|BG355581.2|BG355581 EM1_19_F04.b1_A002 Embryo 1 (EM1) So... 108 1e-029
gb|CW163410.1|CW163410 104_571_11151445_148_36458_063 Sorgh... 77 2e-029
gb|CW045028.1|CW045028 104_281_10509311_115_30232 Sorghum m... 71 3e-029
gb|CW179633.1|CW179633 104_593_11160203_116_36623_034 Sorgh... 79 3e-029
gb|CW177877.1|CW177877 104_591_11159265_116_36611_041 Sorgh... 121 5e-029
gb|BG557469.1|BG557469 EM1_44_E12.b1_A002 Embryo 1 (EM1) So... 108 6e-029
gb|CL150304.1|CL150304 104_331_10778427_116_31356_363 Sorgh... 95 1e-027
gb|CW214761.1|CW214761 104_646_11194182_148_37053_017 Sorgh... 74 4e-027
gb|CW482454.1|CW482454 fsbb001f242i21k0 Sorghum methylation... 74 4e-027
gb|BG240213.1|BG240213 OV1_19_C06.b1_A002 Ovary 1 (OV1) Sor... 84 4e-027
gb|CW260112.1|CW260112 104_726_11228790_148_35187_019 Sorgh... 88 1e-026
gb|CW345705.1|CW345705 104_848_11488642_116_36212_033 Sorgh... 113 1e-026
gb|BG355666.1|BG355666 EM1_16_F05.g1_A002 Embryo 1 (EM1) So... 121 2e-026
gb|CF430219.1|CF430219 PH1_27_A08.b1_A002 Phosphorous-defic... 121 2e-026
gb|CX623191.1|CX623191 GABR1_68_F03.b1_A002 GA- or brassino... 121 2e-026
gb|BG052868.1|BG052868 RHIZ2_15_B11.g1_A003 Rhizome2 (RHIZ2... 121 3e-026
gb|BG557559.1|BG557559 EM1_53_A06.g1_A002 Embryo 1 (EM1) So... 121 3e-026
gb|BG556478.1|BG556478 EM1_37_F06.g1_A002 Embryo 1 (EM1) So... 90 4e-026
gb|BG051930.1|BG051930 RHIZ2_6_F11.g1_A003 Rhizome2 (RHIZ2)... 120 4e-026
gb|CL155278.1|CL155278 104_341_10782016_114_31471_112 Sorgh... 76 2e-025
gb|CW215800.1|CW215800 104_648_11194751_116_37117_092 Sorgh... 80 3e-025
gb|CW201862.1|CW201862 104_627_11184792_116_37108_082 Sorgh... 79 2e-024
gb|CW215801.1|CW215801 104_648_11194751_148_37118_092 Sorgh... 78 2e-024
gb|CW146462.1|CW146462 104_539_11139005_148_34986_025 Sorgh... 70 2e-024
gb|CW479320.1|CW479320 fsbb001f237l21f0 Sorghum methylation... 82 5e-024
gb|BZ351065.1|BZ351065 hv18a09.g1 WGS-SbicolorF (JM107 adap... 68 1e-023
gb|CW412412.1|CW412412 fsbb001f108a17k0 Sorghum methylation... 71 3e-023
gb|CW045027.1|CW045027 104_281_10509311_114_30236 Sorghum m... 71 3e-023
gb|CW216041.1|CW216041 104_648_11194902_148_37115_019 Sorgh... 71 3e-023
gb|CW056377.1|CW056377 104_298_10517649_115_30157 Sorghum m... 71 3e-023
gb|CW069981.1|CW069981 104_320_10526365_1_30089 Sorghum met... 71 3e-023
gb|CW366416.1|CW366416 fsbb001f039g15f0 Sorghum methylation... 84 9e-023
gb|CW190097.1|CW190097 104_611_11174316_116_36748_038 Sorgh... 84 1e-022
gb|CW029129.1|CW029129 104_256_10499499_116_30400 Sorghum m... 81 2e-022
gb|BG053558.1|BG053558 RHIZ2_10_G02.g1_A003 Rhizome2 (RHIZ2... 108 2e-022
gb|CW132505.1|CW132505 104_515_11116248_116_34797_082 Sorgh... 80 2e-022
gb|CW166190.1|CW166190 104_574_11152918_116_36483_081 Sorgh... 108 2e-022
gb|BG411337.1|BG411337 EM1_20_F03.b1_A002 Embryo 1 (EM1) So... 108 2e-022
gb|CW072097.1|CW072097 104_325_10592073_114_30535 Sorghum m... 107 4e-022
gb|CW140474.1|CW140474 104_531_11135799_148_34922_064 Sorgh... 80 5e-022
gb|CW433351.1|CW433351 fsbb001f148i13f0 Sorghum methylation... 75 6e-022
gb|CL192765.1|CL192765 104_415_10940470_116_32261_081 Sorgh... 71 8e-022
gb|CW216040.1|CW216040 104_648_11194902_116_37116_019 Sorgh... 62 1e-021
gb|CW470839.1|CW470839 fsbb001f224e15k0 Sorghum methylation... 105 1e-021
gb|CW448127.1|CW448127 fsbb001f181j14f0 Sorghum methylation... 63 3e-021
gb|CD235047.1|CD235047 SS1_19_A02.g1_A012 Salt-stressed see... 100 3e-021
gb|CN142636.1|CN142636 WOUND1_11_F01.b1_A002 Wounded leaves... 103 5e-021
gb|CW325049.1|CW325049 104_819_11477484_148_35911_034 Sorgh... 72 9e-021
gb|CD432755.1|CD432755 ETH1_33_A06.b1_A002 Ethylene-treated... 102 1e-020
>gb|CN136232.1|CN136232 OX1_41_D05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 5', mRNA sequence
Length = 840
Score = 212 bits (457), Expect(3) = e-108
Identities = 81/101 (80%), Positives = 90/101 (89%)
Frame = +2 / +1
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 349 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 528
Query: 560 RRVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
RRV C KKGGIRFTINGHSYFNLVLVTNV GAGDV +V++K
Sbjct: 529 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIK 651
Score = 137 bits (293), Expect(4) = 1e-065
Identities = 61/88 (69%), Positives = 64/88 (72%)
Frame = -2 / -2
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRLK*EWPLMV R+PPF H TL * TGTMPA A+ GC MSK RGGLHQP
Sbjct: 611 LVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQP 432
Query: 462 PSSXGSALLGGQKLVAVTTTEPGRHERP 379
PSS G LGGQKLVAVT PGRH+ P
Sbjct: 431 PSSLGRP*LGGQKLVAVTVMVPGRHDCP 348
Score = 120 bits (257), Expect(3) = e-108
Identities = 45/59 (76%), Positives = 50/59 (84%)
Frame = +2 / +1
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQF 868
S GWQ +SRNWGQNWQSN+LLDGQ+LSF+VT SDGR+V SN AP GW FGQTF GAQF
Sbjct: 658 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF 834
Score = 100 bits (214), Expect(3) = e-108
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +1
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 160 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 339
Query: 362 DAAG 373
D G
Sbjct: 340 DNDG 351
Score = 98.2 bits (208), Expect(4) = 1e-065
Identities = 39/57 (68%), Positives = 40/57 (70%)
Frame = -2 / -2
Query: 867 NWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
NWAP KVWP QP GA L T RPSL VT K+R PSRS LLCQFWPQ RD CHP
Sbjct: 833 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHP 663
Score = 96.4 bits (204), Expect(3) = 2e-027
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -1 / -1
Query: 700 PGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAALLVARNPAVGDGNNAGPVERD 521
P GA L G+ +HV GA HVGHQ+QVEVGVAVDGE ALL AR+P VGDG++AG V RD
Sbjct: 669 PPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRD 490
Query: 520 ALEHGLRH 497
E LRH
Sbjct: 489 LEEGRLRH 466
Score = 46.0 bits (94), Expect(4) = 1e-065
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = -1 / -1
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGP 188
P AV V VPTR AH AGR+AAAVE GV P
Sbjct: 258 PRAVHVPVPTRAAHCAGRVAAAVERGVGALP 166
Score = 43.2 bits (88), Expect(3) = 2e-027
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 763 LPVQERVALPVLAPVARQGLPPG 695
L V+ERVALPVLAPV GLPPG
Sbjct: 729 LAVEERVALPVLAPVPGHGLPPG 661
Score = 28.6 bits (56), Expect(3) = 2e-027
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -3
Query: 302 APPCWCRTPGC 270
APPC CRTP C
Sbjct: 280 APPCSCRTPCC 248
Score = 28.6 bits (56), Expect(4) = 1e-065
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -2
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 350 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 234
>gb|CW426483.1|CW426483 fsbb001f137o10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137o10, DNA
sequence
Length = 727
Score = 243 bits (526), Expect(4) = 1e-087
Identities = 99/105 (94%), Positives = 102/105 (97%)
Frame = +2 / +3
Query: 563 RVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKADRSPGWQALSRNWGQNWQS 742
RVACNKKGGIRFTINGHSYFNLVLVTNV GAGDVHAVAVK +RS GWQALSRNWGQNWQS
Sbjct: 33 RVACNKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKGERSAGWQALSRNWGQNWQS 212
Query: 743 NTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQFN*T 877
NTLLDGQALSFRVTTSDGRSV+SNNAAPRGW+FGQTFSGAQFN*T
Sbjct: 213 NTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSGAQFN*T 347
Score = 198 bits (427), Expect(4) = 4e-072
Identities = 82/106 (77%), Positives = 86/106 (81%)
Frame = -2 / -1
Query: 876 VQLNWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
VQLNWAPLKVWPK QPRGAALLE+TERPSLVVTR + ACPSRSVLLCQFWPQLRD ACHP
Sbjct: 346 VQLNWAPLKVWPKAQPRGAALLETTERPSLVVTRNESACPSRSVLLCQFWPQLRDSACHP 167
Query: 696 GERXXXXXXXXXXXXXXTLVTSTRLK*EWPLMVKRMPPFLLHATLR 559
ER TLVTSTRLK*EWPL+V RMPPFLLHATL+
Sbjct: 166 AERSPFTATACTSPAPPTLVTSTRLK*EWPLIVNRMPPFLLHATLQ 29
Score = 128 bits (274), Expect(5) = 5e-051
Identities = 56/68 (82%), Positives = 61/68 (89%)
Frame = -1 / -3
Query: 763 LPVQERVALPVLAPVARQGLPPGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAA 584
LPVQERVALPVLAPVARQ LPP GA+ LHG+RVHVAGA HVGHQ+QVEVG+AVD E AA
Sbjct: 233 LPVQERVALPVLAPVARQRLPPRGALALHGHRVHVAGAAHVGHQHQVEVGMAVDCEPDAA 54
Query: 583 LLVARNPA 560
LLVAR+PA
Sbjct: 53 LLVARDPA 30
Score = 72.1 bits (151), Expect(4) = 1e-087
Identities = 30/45 (66%), Positives = 30/45 (66%)
Frame = +1 / +2
Query: 1066 VLVFLGCIRLGNWRWW*GWSADKRRQAALYHPPIMRLGPHGDGSF 1200
VL FLGC LG GW D RRQAALYHPPI R GPHGDG F
Sbjct: 572 VLAFLGCFGLGIGSGGKGWLGD*RRQAALYHPPIKRFGPHGDGLF 706
Score = 68.4 bits (143), Expect(4) = 4e-072
Identities = 30/45 (66%), Positives = 31/45 (68%)
Frame = -3 / -2
Query: 1199 KEPSP*GPKRIIGG*YKAACLRLSADQPYHHLQFPSRIQPRNTKT 1065
K PSP*GPKR+IGG*YKAACLR S QP L P QPRN T
Sbjct: 705 KRPSP*GPKRLIGG*YKAACLR*SPSQPLPPLPIPKPKQPRNANT 571
Score = 61.6 bits (128), Expect(5) = 5e-051
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -1 / -3
Query: 1201 RRSHHHEALNA*LAGDTRQPASVYLQTSLTTTSNFQAGYNQGTLKH 1064
+R HHHEA NA*LAGDTR+PASV LQ SL F + N GT H
Sbjct: 707 KRGHHHEAQNA*LAGDTRRPASVNLQASLYHHFQFPSRNNPGTPTH 570
Score = 48.7 bits (100), Expect(7) = 5e-037
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 700 VAGPVAQLGPELAEQHAPGRA 762
VAG VAQLGPELAEQHAPGRA
Sbjct: 170 VAGAVAQLGPELAEQHAPGRA 232
Score = 46.4 bits (95), Expect(7) = 5e-037
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1 / +2
Query: 553 LLPQGCVQQEGRHTFHHQRPLLLQP 627
LL QG VQQEGRH H+QRP LLQP
Sbjct: 23 LLLQGRVQQEGRHPVHNQRPFLLQP 97
Score = 43.7 bits (89), Expect(7) = 5e-037
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +3 / +1
Query: 1116 RLVCR*TEAGCLVSPANYAFRASW*WLL 1199
RL R TEAG LVSPAN AF ASW*W L
Sbjct: 622 RLAWRLTEAGRLVSPAN*AFWASW*WPL 705
Score = 40.5 bits (82), Expect(4) = 1e-087
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +2 / +2
Query: 923 VVPSTPIGACREAPWFYEWSAPRICSWELPVV 1018
VV PIGACRE + A RI SWELPVV
Sbjct: 431 VVGPPPIGACRERRHGFMSGASRIGSWELPVV 526
Score = 37.7 bits (76), Expect(7) = 5e-037
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 937 PDWSLPRGAMVL*MVCTSHLLLGITSS 1017
P+WSLPR A C SH LLGITSS
Sbjct: 445 PNWSLPREAPWFYEWCISHWLLGITSS 525
Score = 36.8 bits (74), Expect(4) = 4e-072
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1 / -1
Query: 1018 NYW*FPGANARCRPFIKPWRLSAGS 944
NYW*FPGANARC LSA S
Sbjct: 526 NYW*FPGANARCTTHKTMAPLSASS 452
Score = 34.5 bits (69), Expect(5) = 5e-051
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3 / -3
Query: 1019 KLLVIPRSKCEVQTIHKTMAPLGRLQSGWTEQL 921
KLLVIPRS+CE+ A LG+LQ G +L
Sbjct: 527 KLLVIPRSQCEMHHS*NHGASLGKLQLGVDRRL 429
Score = 31.3 bits (62), Expect(7) = 5e-037
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 1081 GCIRLGNWRWW* 1116
G RLGNW+WW*
Sbjct: 586 GLFRLGNWKWW* 621
Score = 31.3 bits (62), Expect(7) = 5e-037
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 841 RPDFQRCPVQLNTPPPFMQR 900
RPD QR PVQLNT P R
Sbjct: 311 RPDLQRRPVQLNTRHPVRSR 370
Score = 29.9 bits (59), Expect(5) = 5e-051
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 877 CSVELGTAESLAERP 833
CSVELG AE LAE P
Sbjct: 347 CSVELGAAEGLAEGP 303
Score = 27.6 bits (54), Expect(4) = 4e-072
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 1063 HANASTIKPALLLGL 1019
H STIKPAL+LGL
Sbjct: 572 HTMPSTIKPALILGL 528
Score = 27.2 bits (53), Expect(4) = 1e-087
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 1017 FRPSNSAGFIVLAL 1058
FRPS SAGFIVL +
Sbjct: 526 FRPSISAGFIVLGM 567
Score = 24.0 bits (46), Expect(7) = 5e-037
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1018 LGLVIARVLSC 1050
LGLV+A+VLSC
Sbjct: 527 LGLVLAQVLSC 559
Score = 23.5 bits (45), Expect(5) = 5e-051
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 1052 KHDKTRAITRPK 1017
+HDKT A TRPK
Sbjct: 561 QHDKTCANTRPK 526
>gb|BG556631.1|BG556631 EM1_37_F06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 448
Score = 324 bits (701), Expect = 2e-087
Identities = 127/145 (87%), Positives = 129/145 (88%)
Frame = +2 / +2
Query: 152 RPHGHAPLGGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGL 331
+PHGHAPLGGGAWSSAHATFY YGNLYSQGYGTNTAALSTALFN+GL
Sbjct: 14 QPHGHAPLGGGAWSSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNSGL 193
Query: 332 SCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPV 511
SCGACFEVRCDAAGGG SCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPV
Sbjct: 194 SCGACFEVRCDAAGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPV 373
Query: 512 FQRIALYRAGIVPVSYRRVACNKKG 586
FQRIALYRAGIVPVSYRRVACNKKG
Sbjct: 374 FQRIALYRAGIVPVSYRRVACNKKG 448
Score = 223 bits (481), Expect(2) = 1e-066
Identities = 94/110 (85%), Positives = 94/110 (85%)
Frame = -2 / -2
Query: 585 PFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTT 406
PFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSS GSALLGGQKLVAVTT
Sbjct: 447 PFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSEGSALLGGQKLVAVTT 268
Query: 405 TEPGRHERPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
TEPGRHE PPPAAS RTSKQAPQLRP VPYPWL*RLPY
Sbjct: 267 TEPGRHEWLPPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPY 118
Score = 105 bits (224), Expect(3) = 5e-038
Identities = 49/86 (56%), Positives = 50/86 (58%)
Frame = -1 / -1
Query: 412 HHDGXXXXXXXXXXXXXAPHLXXXXXXXXXXXXXXXXXXXXXXVPLAVEVAVPTRPAHGA 233
HHDG A HL VPLAVEVAVPTRPAHGA
Sbjct: 274 HHDGARQARVAPAARRVAAHLEAGAAAEAAVEERRAQRRRVGAVPLAVEVAVPTRPAHGA 95
Query: 232 GRIAAAVEGGVSRGPRATSERCVAVR 155
GR+AAAVEGGVSRGPRATSERCVAVR
Sbjct: 94 GRVAAAVEGGVSRGPRATSERCVAVR 17
Score = 73.9 bits (155), Expect(4) = 2e-038
Identities = 29/34 (85%), Positives = 31/34 (91%)
Frame = +3 / +3
Query: 141 SRTRGRTATHRSEVARGPRLTPPSTAAAMRPAPW 242
+R+ RTATHRSEVARGPRLTPPSTAAA RPAPW
Sbjct: 3 TRSSSRTATHRSEVARGPRLTPPSTAAATRPAPW 104
Score = 70.3 bits (147), Expect(3) = 5e-038
Identities = 28/30 (93%), Positives = 30/30 (100%)
Frame = -1 / -1
Query: 586 ALLVARNPAVGDGNNAGPVERDALEHGLRH 497
ALLVAR+PAVGDG+NAGPVERDALEHGLRH
Sbjct: 448 ALLVARDPAVGDGDNAGPVERDALEHGLRH 359
Score = 66.1 bits (138), Expect(4) = 2e-038
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = +3 / +3
Query: 498 CRSPCSSASRSTGPALFPSPTAGLRATRR 584
CRSPCSSASRSTGPAL PSPTAG RATRR
Sbjct: 360 CRSPCSSASRSTGPALSPSPTAGSRATRR 446
Score = 52.8 bits (109), Expect(2) = 1e-066
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = -2 / -2
Query: 210 KVA*AEDHAPPPSGAWPCG 154
KVA*AEDHAPPPSGAWPCG
Sbjct: 72 KVA*AEDHAPPPSGAWPCG 16
Score = 50.1 bits (103), Expect(4) = 2e-038
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / +1
Query: 262 QPLQPGVRHQHGGAEHGA 315
QPLQPGVRHQHGGAEHGA
Sbjct: 124 QPLQPGVRHQHGGAEHGA 177
Score = 27.2 bits (53), Expect(4) = 2e-038
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 388 VSAGLRRGDGH 420
V AGLRRGDGH
Sbjct: 250 VPAGLRRGDGH 282
Score = 22.6 bits (43), Expect(3) = 5e-038
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -3
Query: 416 PSPRRSPA 393
PSPRRSPA
Sbjct: 278 PSPRRSPA 255
>gb|CF429993.1|CF429993 PH1_25_G07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_G07_A002 5', mRNA sequence
Length = 823
Score = 185 bits (399), Expect(3) = 1e-086
Identities = 71/95 (74%), Positives = 80/95 (84%)
Frame = +2 / +3
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
S++VTATNFCPPN ALPSDDGGWCNPPR HFD++ P+F IA YRAGIVPVSYRRV C K
Sbjct: 423 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 602
Query: 581 KGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKA 685
GG+RFTING YFNLVL+TNV GAGD+ +VKA
Sbjct: 603 SGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKA 707
Score = 109 bits (232), Expect(4) = 4e-048
Identities = 54/80 (67%), Positives = 54/80 (67%)
Frame = -2 / -1
Query: 639 VTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPP 460
V STRLK PLMV R PP H T R*ETGTMPA SAM N G SK RGGLHQPP
Sbjct: 661 VISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPP 482
Query: 459 SSXGSALLGGQKLVAVTTTE 400
SS GSA GGQKLVAVT E
Sbjct: 481 SSEGSA*FGGQKLVAVTRME 422
Score = 105 bits (225), Expect(3) = 1e-086
Identities = 40/63 (63%), Positives = 43/63 (68%)
Frame = +2 / +3
Query: 176 GGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEV 355
GGG W SAHATFY YGNLYSQGYG N AAL TALFN GLSCGACFE+
Sbjct: 195 GGGGWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALGTALFNEGLSCGACFEL 374
Query: 356 RCD 364
+C+
Sbjct: 375 KCE 383
Score = 70.3 bits (147), Expect(3) = 1e-086
Identities = 27/37 (72%), Positives = 30/37 (81%)
Frame = +2 / +3
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRS 802
S GW +SRNWGQNWQSN +L GQALSFRVT SD R+
Sbjct: 711 STGWLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRT 821
Score = 53.3 bits (110), Expect(4) = 4e-048
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = -2 / -1
Query: 798 RPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
R SL VTRK+ A P+R L CQFWPQ RD HP
Sbjct: 817 RRSLPVTRKESAWPTRMALDCQFWPQFRDMVSHP 716
Score = 45.5 bits (93), Expect(4) = 4e-048
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 363 SHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLP 259
SH +SK APQLRP PYPWL RLP
Sbjct: 382 SHLSSKHAPQLRPSLNSAVPSAALFTPYPWLYRLP 278
Score = 42.3 bits (86), Expect(4) = 4e-048
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRATS 176
PLAV+VA+ R AHGA + AAVE GV P A +
Sbjct: 299 PLAVQVAIAARAAHGARGVTAAVERGVRALPAAAA 195
>gb|CX607081.1|CX607081 ANR1_6_C12.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_6_C12_A002 5', mRNA sequence
Length = 705
Score = 212 bits (457), Expect(3) = 1e-086
Identities = 81/101 (80%), Positives = 90/101 (89%)
Frame = +2 / +3
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 336 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 515
Query: 560 RRVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
RRV C KKGGIRFTINGHSYFNLVLVTNV GAGDV +V++K
Sbjct: 516 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIK 638
Score = 137 bits (293), Expect(4) = 1e-049
Identities = 61/88 (69%), Positives = 64/88 (72%)
Frame = -2 / -3
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRLK*EWPLMV R+PPF H TL * TGTMPA A+ GC MSK RGGLHQP
Sbjct: 598 LVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQP 419
Query: 462 PSSXGSALLGGQKLVAVTTTEPGRHERP 379
PSS G LGGQKLVAVT PGRH+ P
Sbjct: 418 PSSLGRP*LGGQKLVAVTVMVPGRHDCP 335
Score = 100 bits (214), Expect(3) = 1e-086
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +3
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 147 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 326
Query: 362 DAAG 373
D G
Sbjct: 327 DNDG 338
Score = 96.4 bits (204), Expect(3) = 2e-026
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -1 / -2
Query: 700 PGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAALLVARNPAVGDGNNAGPVERD 521
P GA L G+ +HV GA HVGHQ+QVEVGVAVDGE ALL AR+P VGDG++AG V RD
Sbjct: 656 PPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRD 477
Query: 520 ALEHGLRH 497
E LRH
Sbjct: 476 LEEGRLRH 453
Score = 48.7 bits (100), Expect(3) = 1e-086
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = +2 / +3
Query: 692 SPGWQALSRNWGQNWQSNTL 751
S GWQ +SRNWGQNWQSN+L
Sbjct: 645 STGWQPMSRNWGQNWQSNSL 704
Score = 47.3 bits (97), Expect(4) = 1e-049
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 245 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 147
Score = 42.8 bits (87), Expect(4) = 1e-049
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = -2 / -3
Query: 750 SVLLCQFWPQLRDRACHP 697
S LLCQFWPQ RD CHP
Sbjct: 703 SELLCQFWPQFRDMGCHP 650
Score = 39.1 bits (79), Expect(3) = 2e-026
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = -1 / -2
Query: 751 ERVALPVLAPVARQGLPPG 695
ERVALPVLAPV GLPPG
Sbjct: 704 ERVALPVLAPVPGHGLPPG 648
Score = 28.6 bits (56), Expect(3) = 2e-026
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 302 APPCWCRTPGC 270
APPC CRTP C
Sbjct: 267 APPCSCRTPCC 235
Score = 28.6 bits (56), Expect(4) = 1e-049
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -3
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 337 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 221
>gb|CN136158.1|CN136158 OX1_41_D05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_D05_A002 3', mRNA sequence
Length = 725
Score = 209 bits (451), Expect(2) = 4e-083
Identities = 80/101 (79%), Positives = 89/101 (88%)
Frame = +2 / +2
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR H DM+QP F +IA YRAGIVPV+Y
Sbjct: 14 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHLDMAQPAFLQIAQYRAGIVPVAY 193
Query: 560 RRVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
RRV C KKGGIRFTINGHSYFNLVLVTNV GAGDV +V++K
Sbjct: 194 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIK 316
Score = 137 bits (293), Expect(2) = 2e-054
Identities = 61/88 (69%), Positives = 64/88 (72%)
Frame = -2 / -3
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRLK*EWPLMV R+PPF H TL * TGTMPA A+ GC MSK RGGLHQP
Sbjct: 276 LVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQP 97
Query: 462 PSSXGSALLGGQKLVAVTTTEPGRHERP 379
PSS G LGGQKLVAVT PGRH+ P
Sbjct: 96 PSSLGRP*LGGQKLVAVTVMVPGRHDCP 13
Score = 121 bits (259), Expect(2) = 4e-083
Identities = 47/66 (71%), Positives = 52/66 (78%)
Frame = +2 / +2
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQFN 871
S GWQ +SRNWGQNWQSN+LLDGQ+LSF+VT SDGR+V SN AP GW FGQTF GAQF
Sbjct: 323 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSNGVAPAGWQFGQTFEGAQF* 502
Query: 872 *THPHR 889
P R
Sbjct: 503 HAPPRR 520
Score = 98.2 bits (208), Expect(2) = 2e-054
Identities = 39/57 (68%), Positives = 40/57 (70%)
Frame = -2 / -3
Query: 867 NWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
NWAP KVWP QP GA L T RPSL VT K+R PSRS LLCQFWPQ RD CHP
Sbjct: 498 NWAPSKVWPNCQPAGATPLLVTVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHP 328
Score = 96.4 bits (204), Expect(2) = 6e-026
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -1 / -2
Query: 700 PGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAALLVARNPAVGDGNNAGPVERD 521
P GA L G+ +HV GA HVGHQ+QVEVGVAVDGE ALL AR+P VGDG++AG V RD
Sbjct: 334 PPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRD 155
Query: 520 ALEHGLRH 497
E LRH
Sbjct: 154 LEEGRLRH 131
Score = 43.2 bits (88), Expect(2) = 6e-026
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1 / -2
Query: 763 LPVQERVALPVLAPVARQGLPPG 695
L V+ERVALPVLAPV GLPPG
Sbjct: 394 LAVEERVALPVLAPVPGHGLPPG 326
>gb|CW079177.1|CW079177 104_399_10899353_114_32392_079 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899353, DNA
sequence
Length = 645
Score = 256 bits (554), Expect(2) = 7e-083
Identities = 102/117 (87%), Positives = 104/117 (88%)
Frame = +2 / -2
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPP 436
YGNLYSQGYGTNTAALSTALFN+GLSCGACFEVRCDAAGGG SCLPGSVVVTATNFCPP
Sbjct: 362 YGNLYSQGYGTNTAALSTALFNSGLSCGACFEVRCDAAGGGSHSCLPGSVVVTATNFCPP 183
Query: 437 NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTIN 607
NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR F I+
Sbjct: 182 NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRSVVKSTRWFLFAIS 12
Score = 205 bits (443), Expect(3) = 4e-070
Identities = 87/103 (84%), Positives = 87/103 (84%)
Frame = -2 / +1
Query: 564 LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTTEPGRHE 385
LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSS GSALLGGQKLVAVTTTEPGRHE
Sbjct: 55 LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSEGSALLGGQKLVAVTTTEPGRHE 234
Query: 384 RPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
PPPAAS RTSKQAPQLRP VPYPWL*RLPY
Sbjct: 235 WLPPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPY 363
Score = 73.5 bits (154), Expect(2) = 7e-083
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +3 / -1
Query: 114 GCGLATTAPSRTRGRTATHRSEVARGPRLTPPSTAAAMRPAPW 242
G T + + RTATHRSEVARGPRLTPPSTAAA RPAPW
Sbjct: 606 GLATTTPGRTPSSSRTATHRSEVARGPRLTPPSTAAATRPAPW 478
Score = 69.3 bits (145), Expect(3) = 4e-070
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = -1 / +2
Query: 241 HGAGRIAAAVEGGVSRGPRATSERCVAVR 155
HGAGR+AAAVEGGVSRGPRATSERCVAVR
Sbjct: 479 HGAGRVAAAVEGGVSRGPRATSERCVAVR 565
Score = 68.9 bits (144), Expect(4) = 2e-032
Identities = 27/40 (67%), Positives = 28/40 (70%)
Frame = +2 / -3
Query: 95 PFALSRGLRLGHHRAQPHPRPHGHAPLGGGAWSSAHATFY 214
P A GL H R P +PHGHAPLGGGAWSSAHATFY
Sbjct: 625 PHAHGLGLGHHHPRPHPQQQPHGHAPLGGGAWSSAHATFY 506
Score = 58.3 bits (121), Expect(4) = 2e-027
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1 / +3
Query: 565 PAVGDGNNAGPVERDALEHGLRH 497
PAVGDG+NAGPVERDALEHGLRH
Sbjct: 54 PAVGDGDNAGPVERDALEHGLRH 122
Score = 56.1 bits (116), Expect(4) = 2e-032
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +3 / -3
Query: 498 CRSPCSSASRSTGPALFPSPTAG 566
CRSPCSSASRSTGPAL PSPTAG
Sbjct: 121 CRSPCSSASRSTGPALSPSPTAG 53
Score = 56.1 bits (116), Expect(4) = 2e-027
Identities = 23/33 (69%), Positives = 23/33 (69%)
Frame = -2 / +3
Query: 210 KVA*AEDHAPPPSGAWPCGLGCGWARWWPSRSP 112
KVA*AEDHAPPPSGAWPCG G W SP
Sbjct: 510 KVA*AEDHAPPPSGAWPCGCCWGCGLGWWWPSP 608
Score = 50.1 bits (103), Expect(4) = 2e-032
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / -1
Query: 262 QPLQPGVRHQHGGAEHGA 315
QPLQPGVRHQHGGAEHGA
Sbjct: 357 QPLQPGVRHQHGGAEHGA 304
Score = 48.3 bits (99), Expect(4) = 2e-027
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3 / +2
Query: 302 APPCWCRTPGCRGC 261
APPCWCRTPGCRGC
Sbjct: 317 APPCWCRTPGCRGC 358
Score = 31.3 bits (62), Expect(3) = 4e-070
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / +3
Query: 159 CGLGCGWARWWPSRSP 112
C GCG WWPS SP
Sbjct: 567 CCWGCGLGWWWPSPSP 614
Score = 27.2 bits (53), Expect(4) = 2e-032
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 388 VSAGLRRGDGH 420
V AGLRRGDGH
Sbjct: 231 VPAGLRRGDGH 199
Score = 22.6 bits (43), Expect(4) = 2e-027
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / +2
Query: 416 PSPRRSPA 393
PSPRRSPA
Sbjct: 203 PSPRRSPA 226
>gb|CF430353.1|CF430353 PH1_27_A08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_27_A08_A002 5', mRNA sequence
Length = 787
Score = 161 bits (347), Expect(3) = 1e-082
Identities = 63/83 (75%), Positives = 70/83 (84%)
Frame = +2 / +2
Query: 434 PNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGH 613
P A P+ GGWCNPPR HFDM+QP F +IA YRAGIVPV+YRRV C KKGGIRFTINGH
Sbjct: 407 PTTASPATTGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCVKKGGIRFTINGH 586
Query: 614 SYFNLVLVTNVEGAGDVHAVAVK 682
SYFNLVLVTNV GAGDV +V++K
Sbjct: 587 SYFNLVLVTNVAGAGDVQSVSIK 655
Score = 105 bits (224), Expect(3) = 8e-032
Identities = 46/70 (65%), Positives = 50/70 (71%)
Frame = -2 / -2
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRLK*EWPLMV R+PPF H TL * TGTMPA A+ GC MSK RGGLHQP
Sbjct: 615 LVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQP 436
Query: 462 PSSXGSALLG 433
P G A++G
Sbjct: 435 PVVAGEAVVG 406
Score = 100 bits (214), Expect(3) = 1e-082
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +1
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 163 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 342
Query: 362 DAAG 373
D G
Sbjct: 343 DNDG 354
Score = 96.4 bits (204), Expect(5) = 6e-053
Identities = 44/68 (64%), Positives = 50/68 (73%)
Frame = -1 / -1
Query: 700 PGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAALLVARNPAVGDGNNAGPVERD 521
P GA L G+ +HV GA HVGHQ+QVEVGVAVDGE ALL AR+P VGDG++AG V RD
Sbjct: 673 PPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHARHPPVGDGHDAGAVLRD 494
Query: 520 ALEHGLRH 497
E LRH
Sbjct: 493 LEEGRLRH 470
Score = 85.8 bits (181), Expect(3) = 1e-082
Identities = 32/41 (78%), Positives = 37/41 (90%)
Frame = +2 / +2
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSN 814
S GWQ +SRNWGQNWQSN+LLDGQ+LSF+VT SDGR+V SN
Sbjct: 662 STGWQPMSRNWGQNWQSNSLLDGQSLSFQVTASDGRTVTSN 784
Score = 67.5 bits (141), Expect(5) = 6e-053
Identities = 26/36 (72%), Positives = 27/36 (75%)
Frame = -2 / -2
Query: 804 TERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
T RPSL VT K+R PSRS LLCQFWPQ RD CHP
Sbjct: 774 TVRPSLAVTWKERLWPSRSELLCQFWPQFRDMGCHP 667
Score = 63.8 bits (133), Expect(5) = 2e-033
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2 / +1
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNP 478
G+SCLPG++ VTATNFCPPN LPSDDG P
Sbjct: 352 GQSCLPGTITVTATNFCPPNYGLPSDDGRLVQP 450
Score = 49.6 bits (102), Expect(5) = 2e-033
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 538 RHCSRLLPQGCVQQEGRHTFHHQRPLLLQP 627
RH +R L +G V++EGR HHQRPLLLQP
Sbjct: 511 RHRARRLQEGAVREEGRDPVHHQRPLLLQP 600
Score = 47.3 bits (97), Expect(5) = 6e-053
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 261 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 163
Score = 44.6 bits (91), Expect(5) = 6e-053
Identities = 20/33 (60%), Positives = 21/33 (63%)
Frame = -2 / -3
Query: 477 GLHQPPSSXGSALLGGQKLVAVTTTEPGRHERP 379
G PSS G LGGQKLVAVT PGRH+ P
Sbjct: 449 GCTSRPSSLGRP*LGGQKLVAVTVMVPGRHDCP 351
Score = 43.2 bits (88), Expect(3) = 8e-032
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1 / -1
Query: 763 LPVQERVALPVLAPVARQGLPPG 695
L V+ERVALPVLAPV GLPPG
Sbjct: 733 LAVEERVALPVLAPVPGHGLPPG 665
Score = 37.7 bits (76), Expect(5) = 2e-033
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = +1 / +3
Query: 268 LQPGVRHQHGGAEHGA 315
+Q GVRH+HGGAEHGA
Sbjct: 249 VQHGVRHEHGGAEHGA 296
Score = 35.9 bits (72), Expect(5) = 2e-033
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = +1 / +1
Query: 697 RVAGPVAQLGPELAEQHAPGRAGPV 771
RVA V +LGPELAEQ AP R P+
Sbjct: 667 RVAAHVPELGPELAEQLAPRRPEPL 741
Score = 30.4 bits (60), Expect(5) = 2e-033
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = +3 / +2
Query: 180 VARGPRLTPPSTAAAMRPAPW 242
+A G TP STAAA RPA W
Sbjct: 161 MAAGRAPTPRSTAAATRPAQW 223
Score = 28.6 bits (56), Expect(3) = 8e-032
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 302 APPCWCRTPGC 270
APPC CRTP C
Sbjct: 283 APPCSCRTPCC 251
Score = 28.6 bits (56), Expect(5) = 6e-053
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -3
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 353 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 237
>gb|BI140900.1|BI140900 IP1_40_E08.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 185 bits (399), Expect(3) = 2e-082
Identities = 71/95 (74%), Positives = 80/95 (84%)
Frame = +2 / +2
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
S++VTATNFCPPN ALPSDDGGWCNPPR HFD++ P+F IA YRAGIVPVSYRRV C K
Sbjct: 215 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 394
Query: 581 KGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKA 685
GG+RFTING YFNLVL+TNV GAGD+ +VKA
Sbjct: 395 SGGVRFTINGFRYFNLVLITNVAGAGDIVRASVKA 499
Score = 109 bits (232), Expect(5) = 3e-049
Identities = 54/80 (67%), Positives = 54/80 (67%)
Frame = -2 / -2
Query: 639 VTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPP 460
V STRLK PLMV R PP H T R*ETGTMPA SAM N G SK RGGLHQPP
Sbjct: 453 VISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPP 274
Query: 459 SSXGSALLGGQKLVAVTTTE 400
SS GSA GGQKLVAVT E
Sbjct: 273 SSEGSA*FGGQKLVAVTRME 214
Score = 91.3 bits (193), Expect(3) = 2e-082
Identities = 36/59 (61%), Positives = 39/59 (66%)
Frame = +2 / +1
Query: 200 HATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGG 376
HATFY YGNLYSQGYG N AALSTALFN GLSCGACFE++C+ G
Sbjct: 10 HATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGACFELKCENQPG 186
Score = 70.7 bits (148), Expect(3) = 2e-082
Identities = 28/40 (70%), Positives = 31/40 (77%)
Frame = +2 / +2
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLS 811
S GW +SRNWGQNWQSN +L GQALSFRVT SD R+ S
Sbjct: 503 STGWLTMSRNWGQNWQSNAILVGQALSFRVTGSDRRTSTS 622
Score = 53.3 bits (110), Expect(5) = 3e-049
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = -2 / -2
Query: 798 RPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
R SL VTRK+ A P+R L CQFWPQ RD HP
Sbjct: 609 RRSLPVTRKESAWPTRMALDCQFWPQFRDMVSHP 508
Score = 46.0 bits (94), Expect(5) = 3e-049
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -2 / -3
Query: 363 SHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLP 259
SH +SK APQLRP PYPWL RLP
Sbjct: 173 SHLSSKHAPQLRPSLNSAVLSAALFTPYPWLYRLP 69
Score = 40.0 bits (81), Expect(5) = 3e-049
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGV 200
PLAV+VA+ R AHGA + AAVE GV
Sbjct: 90 PLAVQVAIAARAAHGARGVTAAVERGV 10
Score = 23.5 bits (45), Expect(5) = 3e-049
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -2 / -2
Query: 399 PGRHERPP 376
PGRH RPP
Sbjct: 207 PGRHHRPP 184
>gb|CD231880.1|CD231880 SS1_30_D11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D11_A012 5', mRNA sequence
Length = 691
Score = 209 bits (451), Expect(2) = 8e-077
Identities = 80/101 (79%), Positives = 89/101 (88%)
Frame = +2 / +2
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 353 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 532
Query: 560 RRVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
RRV C KKGGIRFTINGHSY NLVLVTNV GAGDV +V++K
Sbjct: 533 RRVPCVKKGGIRFTINGHSYINLVLVTNVAGAGDVQSVSIK 655
Score = 134 bits (287), Expect(3) = 7e-041
Identities = 60/88 (68%), Positives = 63/88 (71%)
Frame = -2 / -2
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRL *EWPLMV R+PPF H TL * TGTMPA A+ GC MSK RGGLHQP
Sbjct: 615 LVTSTRLM*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQP 436
Query: 462 PSSXGSALLGGQKLVAVTTTEPGRHERP 379
PSS G LGGQKLVAVT PGRH+ P
Sbjct: 435 PSSLGRP*LGGQKLVAVTVMVPGRHDCP 352
Score = 100 bits (213), Expect(2) = 8e-077
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +2
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 164 GGWQSAHATFYGGGDASGTMGGVCGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 343
Query: 362 DAAG 373
D G
Sbjct: 344 DNDG 355
Score = 45.1 bits (92), Expect(3) = 7e-041
Identities = 21/33 (63%), Positives = 22/33 (66%)
Frame = -1 / -1
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPT AH AGR+AAAVE GV P A
Sbjct: 262 PRAVHVPVPTHAAHCAGRVAAAVERGVGALPAA 164
Score = 28.6 bits (56), Expect(3) = 7e-041
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -2
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 354 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 238
>gb|DN551840.1|DN551840 pSPR-RT-A-H2_G06_S131 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 861
Score = 180 bits (388), Expect(3) = 5e-075
Identities = 72/98 (73%), Positives = 79/98 (80%)
Frame = +2 / +2
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
SVV+TATNFCPPN ALPSD GGWCNPPR HFD+S P F RIA YRA IVPV+YRRVAC K
Sbjct: 446 SVVITATNFCPPNYALPSDAGGWCNPPRHHFDLSMPAFLRIADYRASIVPVTYRRVACRK 625
Query: 581 KGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKADRS 694
GGIRF +NG YFNLVL++NV GAGDV AVKA +
Sbjct: 626 SGGIRFGVNGFRYFNLVLISNVGGAGDVVRAAVKASHT 739
Score = 115 bits (245), Expect(4) = 3e-045
Identities = 55/81 (67%), Positives = 59/81 (72%)
Frame = -2 / -1
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
L+ STRLK* PL RMPP L HATLR TGTM A *SAMR G + SKW RGGLH P
Sbjct: 687 LLMSTRLK*RKPLTPNRMPPDLRHATLRYVTGTMLAR*SAMRRKAGMERSKWWRGGLHHP 508
Query: 462 PSSXGSALLGGQKLVAVTTTE 400
P+S GSA LGGQKLVAV TT+
Sbjct: 507 PASEGSA*LGGQKLVAVITTD 445
Score = 78.5 bits (165), Expect(3) = 5e-075
Identities = 33/71 (46%), Positives = 36/71 (50%)
Frame = +2 / +2
Query: 197 AHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGG 376
A T Y YGNLY GYG T ALST LFNNGL+CGACFE++C G
Sbjct: 230 ATMTMYGGSDASGTMGGACGYGNLYIAGYGMATGALSTPLFNNGLTCGACFEIKCSCRSG 409
Query: 377 GGRSCLPGSVV 409
C P V
Sbjct: 410 CQCQCHPSGSV 442
Score = 63.8 bits (133), Expect(3) = 5e-075
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2 / +2
Query: 701 WQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNN 817
W L+RNWGQNWQ +++L G ALSFRVTTSD R++ S N
Sbjct: 743 WLPLARNWGQNWQCSSILVGGALSFRVTTSDRRTLTSWN 859
Score = 46.9 bits (96), Expect(4) = 3e-045
Identities = 21/33 (63%), Positives = 23/33 (69%)
Frame = -2 / -1
Query: 798 RPSLVVTRKDRACPSRSVLLCQFWPQLRDRACH 700
R SLVVTRK+ A P+R L CQF PQLR R H
Sbjct: 840 RRSLVVTRKESAPPTRMELHCQFCPQLRARGSH 742
Score = 40.0 bits (81), Expect(4) = 3e-045
Identities = 20/51 (39%), Positives = 23/51 (45%)
Frame = -2 / -1
Query: 408 TTEPGRHERPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
T G H P H SKQAPQ+ P +PYP +*RLPY
Sbjct: 441 TEPEGWHWHWQPLLQLHLISKQAPQVSPLLKSGVLSAPVAMPYPAM*RLPY 289
Score = 38.6 bits (78), Expect(4) = 3e-045
Identities = 16/25 (64%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEG 206
P VEVAVPT AHGA R+AA + G
Sbjct: 313 PRDVEVAVPTGTAHGARRVAATIHG 239
>gb|CW452245.1|CW452245 fsbb001f192l01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f192l01, DNA
sequence
Length = 507
Score = 256 bits (553), Expect(2) = 8e-074
Identities = 100/103 (97%), Positives = 101/103 (98%)
Frame = +2 / -1
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPP 436
YGNLYSQGYGTNTAALSTALFN+GLSCGACFEVRCDAAGGG SCLPGSVVVTATNFCPP
Sbjct: 339 YGNLYSQGYGTNTAALSTALFNSGLSCGACFEVRCDAAGGGSHSCLPGSVVVTATNFCPP 160
Query: 437 NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR 565
NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR
Sbjct: 159 NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR 31
Score = 205 bits (443), Expect(2) = 5e-058
Identities = 87/103 (84%), Positives = 87/103 (84%)
Frame = -2 / +2
Query: 564 LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTTEPGRHE 385
LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSS GSALLGGQKLVAVTTTEPGRHE
Sbjct: 32 LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSEGSALLGGQKLVAVTTTEPGRHE 211
Query: 384 RPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
PPPAAS RTSKQAPQLRP VPYPWL*RLPY
Sbjct: 212 WLPPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPY 340
Score = 43.7 bits (89), Expect(2) = 8e-074
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3 / -3
Query: 192 PRLTPPSTAAAMRPAPW 242
PRLTPPSTAAA RPAPW
Sbjct: 505 PRLTPPSTAAATRPAPW 455
Score = 41.4 bits (84), Expect(2) = 5e-058
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = -1 / +3
Query: 241 HGAGRIAAAVEGGVSRG 191
HGAGR+AAAVEGGVSRG
Sbjct: 456 HGAGRVAAAVEGGVSRG 506
>gb|CD204043.1|CD204043 HS1_3_A10.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_A10_A012 5', mRNA sequence
Length = 632
Score = 196 bits (423), Expect(2) = 4e-073
Identities = 75/91 (82%), Positives = 81/91 (89%)
Frame = +2 / +1
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 358 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 537
Query: 560 RRVACNKKGGIRFTINGHSYFNLVLVTNVEG 652
RRV C KKGGIRFTINGHSYFNLVLVTNV G
Sbjct: 538 RRVPCVKKGGIRFTINGHSYFNLVLVTNVAG 630
Score = 137 bits (293), Expect(3) = 2e-042
Identities = 61/88 (69%), Positives = 64/88 (72%)
Frame = -2 / -1
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRLK*EWPLMV R+PPF H TL * TGTMPA A+ GC MSK RGGLHQP
Sbjct: 620 LVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQP 441
Query: 462 PSSXGSALLGGQKLVAVTTTEPGRHERP 379
PSS G LGGQKLVAVT PGRH+ P
Sbjct: 440 PSSLGRP*LGGQKLVAVTVMVPGRHDCP 357
Score = 100 bits (214), Expect(2) = 4e-073
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +1
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 169 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 348
Query: 362 DAAG 373
D G
Sbjct: 349 DNDG 360
Score = 47.3 bits (97), Expect(3) = 2e-042
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -3
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 267 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 169
Score = 28.6 bits (56), Expect(3) = 2e-042
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -1
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 359 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 243
>gb|CL177978.1|CL177978 104_385_10894229_116_31914_293 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894229, DNA
sequence
Length = 704
Score = 243 bits (526), Expect(3) = 1e-071
Identities = 99/105 (94%), Positives = 102/105 (97%)
Frame = +2 / +1
Query: 563 RVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKADRSPGWQALSRNWGQNWQS 742
RVACNKKGGIRFTINGHSYFNLVLVTNV GAGDVHAVAVK +RS GWQALSRNWGQNWQS
Sbjct: 139 RVACNKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKGERSAGWQALSRNWGQNWQS 318
Query: 743 NTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQFN*T 877
NTLLDGQALSFRVTTSDGRSV+SNNAAPRGW+FGQTFSGAQFN*T
Sbjct: 319 NTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSGAQFN*T 453
Score = 198 bits (427), Expect(3) = 3e-057
Identities = 82/106 (77%), Positives = 86/106 (81%)
Frame = -2 / -1
Query: 876 VQLNWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
VQLNWAPLKVWPK QPRGAALLE+TERPSLVVTR + ACPSRSVLLCQFWPQLRD ACHP
Sbjct: 452 VQLNWAPLKVWPKAQPRGAALLETTERPSLVVTRNESACPSRSVLLCQFWPQLRDSACHP 273
Query: 696 GERXXXXXXXXXXXXXXTLVTSTRLK*EWPLMVKRMPPFLLHATLR 559
ER TLVTSTRLK*EWPL+V RMPPFLLHATL+
Sbjct: 272 AERSPFTATACTSPAPPTLVTSTRLK*EWPLIVNRMPPFLLHATLQ 135
Score = 128 bits (275), Expect(4) = 3e-038
Identities = 58/83 (69%), Positives = 66/83 (79%)
Frame = -1 / -3
Query: 763 LPVQERVALPVLAPVARQGLPPGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAA 584
LPVQERVALPVLAPVARQ LPP GA+ LHG+RVHVAGA HVGHQ+QVEVG+AVD E AA
Sbjct: 339 LPVQERVALPVLAPVARQRLPPRGALALHGHRVHVAGAAHVGHQHQVEVGMAVDCEPDAA 160
Query: 583 LLVARNPAVGDGNNAGPVERDAL 515
LLVAR+PA +RD++
Sbjct: 159 LLVARDPAAAANVGLERNKRDSV 91
Score = 48.7 bits (100), Expect(5) = 5e-025
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 700 VAGPVAQLGPELAEQHAPGRA 762
VAG VAQLGPELAEQHAPGRA
Sbjct: 276 VAGAVAQLGPELAEQHAPGRA 338
Score = 46.4 bits (95), Expect(5) = 5e-025
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1 / +3
Query: 553 LLPQGCVQQEGRHTFHHQRPLLLQP 627
LL QG VQQEGRH H+QRP LLQP
Sbjct: 129 LLLQGRVQQEGRHPVHNQRPFLLQP 203
Score = 40.5 bits (82), Expect(3) = 1e-071
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +2 / +3
Query: 923 VVPSTPIGACREAPWFYEWSAPRICSWELPVV 1018
VV PIGACRE + A RI SWELPVV
Sbjct: 537 VVGPPPIGACRERRHGFMSGASRIGSWELPVV 632
Score = 37.7 bits (76), Expect(5) = 5e-025
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +2
Query: 937 PDWSLPRGAMVL*MVCTSHLLLGITSS 1017
P+WSLPR A C SH LLGITSS
Sbjct: 551 PNWSLPREAPWFYEWCISHWLLGITSS 631
Score = 36.8 bits (74), Expect(3) = 3e-057
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1 / -1
Query: 1018 NYW*FPGANARCRPFIKPWRLSAGS 944
NYW*FPGANARC LSA S
Sbjct: 632 NYW*FPGANARCTTHKTMAPLSASS 558
Score = 34.5 bits (69), Expect(4) = 3e-038
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3 / -3
Query: 1019 KLLVIPRSKCEVQTIHKTMAPLGRLQSGWTEQL 921
KLLVIPRS+CE+ A LG+LQ G +L
Sbjct: 633 KLLVIPRSQCEMHHS*NHGASLGKLQLGVDRRL 535
Score = 31.3 bits (62), Expect(5) = 5e-025
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 841 RPDFQRCPVQLNTPPPFMQR 900
RPD QR PVQLNT P R
Sbjct: 417 RPDLQRRPVQLNTRHPVRSR 476
Score = 29.9 bits (59), Expect(4) = 3e-038
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 877 CSVELGTAESLAERP 833
CSVELG AE LAE P
Sbjct: 453 CSVELGAAEGLAEGP 409
Score = 27.6 bits (54), Expect(3) = 3e-057
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -3
Query: 1063 HANASTIKPALLLGL 1019
H STIKPAL+LGL
Sbjct: 678 HTMPSTIKPALILGL 634
Score = 27.2 bits (53), Expect(3) = 1e-071
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 1017 FRPSNSAGFIVLAL 1058
FRPS SAGFIVL +
Sbjct: 632 FRPSISAGFIVLGM 673
Score = 24.0 bits (46), Expect(5) = 5e-025
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 1018 LGLVIARVLSC 1050
LGLV+A+VLSC
Sbjct: 633 LGLVLAQVLSC 665
Score = 23.5 bits (45), Expect(4) = 3e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 1052 KHDKTRAITRPK 1017
+HDKT A TRPK
Sbjct: 667 QHDKTCANTRPK 632
>gb|CW325048.1|CW325048 104_819_11477484_116_35915_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11477484, DNA
sequence
Length = 612
Score = 243 bits (526), Expect(3) = 1e-071
Identities = 99/105 (94%), Positives = 102/105 (97%)
Frame = +2 / +1
Query: 563 RVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKADRSPGWQALSRNWGQNWQS 742
RVACNKKGGIRFTINGHSYFNLVLVTNV GAGDVHAVAVK +RS GWQALSRNWGQNWQS
Sbjct: 46 RVACNKKGGIRFTINGHSYFNLVLVTNVGGAGDVHAVAVKGERSAGWQALSRNWGQNWQS 225
Query: 743 NTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQFN*T 877
NTLLDGQALSFRVTTSDGRSV+SNNAAPRGW+FGQTFSGAQFN*T
Sbjct: 226 NTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSGAQFN*T 360
Score = 198 bits (427), Expect(3) = 3e-057
Identities = 82/106 (77%), Positives = 86/106 (81%)
Frame = -2 / -2
Query: 876 VQLNWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
VQLNWAPLKVWPK QPRGAALLE+TERPSLVVTR + ACPSRSVLLCQFWPQLRD ACHP
Sbjct: 359 VQLNWAPLKVWPKAQPRGAALLETTERPSLVVTRNESACPSRSVLLCQFWPQLRDSACHP 180
Query: 696 GERXXXXXXXXXXXXXXTLVTSTRLK*EWPLMVKRMPPFLLHATLR 559
ER TLVTSTRLK*EWPL+V RMPPFLLHATL+
Sbjct: 179 AERSPFTATACTSPAPPTLVTSTRLK*EWPLIVNRMPPFLLHATLQ 42
Score = 128 bits (274), Expect(4) = 4e-038
Identities = 56/68 (82%), Positives = 61/68 (89%)
Frame = -1 / -1
Query: 763 LPVQERVALPVLAPVARQGLPPGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAA 584
LPVQERVALPVLAPVARQ LPP GA+ LHG+RVHVAGA HVGHQ+QVEVG+AVD E AA
Sbjct: 246 LPVQERVALPVLAPVARQRLPPRGALALHGHRVHVAGAAHVGHQHQVEVGMAVDCEPDAA 67
Query: 583 LLVARNPA 560
LLVAR+PA
Sbjct: 66 LLVARDPA 43
Score = 48.7 bits (100), Expect(5) = 5e-025
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +3
Query: 700 VAGPVAQLGPELAEQHAPGRA 762
VAG VAQLGPELAEQHAPGRA
Sbjct: 183 VAGAVAQLGPELAEQHAPGRA 245
Score = 46.4 bits (95), Expect(5) = 5e-025
Identities = 19/25 (76%), Positives = 20/25 (80%)
Frame = +1 / +3
Query: 553 LLPQGCVQQEGRHTFHHQRPLLLQP 627
LL QG VQQEGRH H+QRP LLQP
Sbjct: 36 LLLQGRVQQEGRHPVHNQRPFLLQP 110
Score = 40.5 bits (82), Expect(3) = 1e-071
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +2 / +3
Query: 923 VVPSTPIGACREAPWFYEWSAPRICSWELPVV 1018
VV PIGACRE + A RI SWELPVV
Sbjct: 444 VVGPPPIGACRERRHGFMSGASRIGSWELPVV 539
Score = 37.7 bits (76), Expect(5) = 5e-025
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +2
Query: 937 PDWSLPRGAMVL*MVCTSHLLLGITSS 1017
P+WSLPR A C SH LLGITSS
Sbjct: 458 PNWSLPREAPWFYEWCISHWLLGITSS 538
Score = 36.8 bits (74), Expect(3) = 3e-057
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1 / -2
Query: 1018 NYW*FPGANARCRPFIKPWRLSAGS 944
NYW*FPGANARC LSA S
Sbjct: 539 NYW*FPGANARCTTHKTMAPLSASS 465
Score = 34.5 bits (69), Expect(4) = 4e-038
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3 / -1
Query: 1019 KLLVIPRSKCEVQTIHKTMAPLGRLQSGWTEQL 921
KLLVIPRS+CE+ A LG+LQ G +L
Sbjct: 540 KLLVIPRSQCEMHHS*NHGASLGKLQLGVDRRL 442
Score = 31.3 bits (62), Expect(5) = 5e-025
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +3
Query: 841 RPDFQRCPVQLNTPPPFMQR 900
RPD QR PVQLNT P R
Sbjct: 324 RPDLQRRPVQLNTRHPVRSR 383
Score = 29.9 bits (59), Expect(4) = 4e-038
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 877 CSVELGTAESLAERP 833
CSVELG AE LAE P
Sbjct: 360 CSVELGAAEGLAEGP 316
Score = 27.6 bits (54), Expect(3) = 3e-057
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 1063 HANASTIKPALLLGL 1019
H STIKPAL+LGL
Sbjct: 585 HTMPSTIKPALILGL 541
Score = 27.2 bits (53), Expect(3) = 1e-071
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +2
Query: 1017 FRPSNSAGFIVLAL 1058
FRPS SAGFIVL +
Sbjct: 539 FRPSISAGFIVLGM 580
Score = 24.0 bits (46), Expect(5) = 5e-025
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / +3
Query: 1018 LGLVIARVLSC 1050
LGLV+A+VLSC
Sbjct: 540 LGLVLAQVLSC 572
Score = 23.5 bits (45), Expect(4) = 4e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 1052 KHDKTRAITRPK 1017
+HDKT A TRPK
Sbjct: 574 QHDKTCANTRPK 539
>gb|CX611078.1|CX611078 ANR1_22_B08.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_22_B08_A002 5', mRNA sequence
Length = 605
Score = 198 bits (426), Expect(3) = 5e-070
Identities = 76/95 (80%), Positives = 84/95 (88%)
Frame = +2 / +2
Query: 398 GSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACN 577
G++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+YRRV C
Sbjct: 239 GTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAYRRVPCV 418
Query: 578 KKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
KKGGIRFTINGHSYFNLVLVTNV GAGDV +V++K
Sbjct: 419 KKGGIRFTINGHSYFNLVLVTNVAGAGDVQSVSIK 523
Score = 125 bits (268), Expect(4) = 9e-047
Identities = 57/82 (69%), Positives = 59/82 (71%)
Frame = -2 / -3
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRLK*EWPLMV R+PPF H TL * TGTMPA A+ GC MSK RGGLHQP
Sbjct: 483 LVTSTRLK*EWPLMVNRIPPFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQP 304
Query: 462 PSSXGSALLGGQKLVAVTTTEP 397
PSS G LGGQKLVAVT P
Sbjct: 303 PSSLGRP*LGGQKLVAVTVMVP 238
Score = 92.7 bits (196), Expect(2) = 8e-025
Identities = 43/68 (63%), Positives = 49/68 (72%)
Frame = -1 / -2
Query: 700 PGGAVGLHGNRVHVAGAFHVGHQYQVEVGVAVDGETYAALLVARNPAVGDGNNAGPVERD 521
P GA L G+ +HV GA HVGHQ+QVEVGVAVDGE ALL A +P VGDG++AG V RD
Sbjct: 541 PPGAGALDGDGLHVPGAGHVGHQHQVEVGVAVDGEPDPALLHAWHPPVGDGHDAGAVLRD 362
Query: 520 ALEHGLRH 497
E LRH
Sbjct: 361 LEEGRLRH 338
Score = 58.8 bits (122), Expect(3) = 5e-070
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2 / +2
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQA 766
S GWQ +SRNWGQNWQSN+LLDGQ+
Sbjct: 530 STGWQPMSRNWGQNWQSNSLLDGQS 604
Score = 50.1 bits (103), Expect(4) = 9e-047
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = -2 / -3
Query: 759 PSRSVLLCQFWPQLRDRACHP 697
PSRS LLCQFWPQ RD CHP
Sbjct: 597 PSRSELLCQFWPQFRDMGCHP 535
Score = 49.2 bits (101), Expect(3) = 5e-070
Identities = 19/38 (50%), Positives = 20/38 (52%)
Frame = +2 / +2
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNT 295
G W SAHATFY YGN+YS GYGT T
Sbjct: 137 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTIT 250
Score = 47.3 bits (97), Expect(4) = 9e-047
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 235 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 137
Score = 43.2 bits (88), Expect(2) = 8e-025
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -1 / -2
Query: 763 LPVQERVALPVLAPVARQGLPPG 695
L V+ERVALPVLAPV GLPPG
Sbjct: 601 LAVEERVALPVLAPVPGHGLPPG 533
Score = 22.6 bits (43), Expect(4) = 9e-047
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3 / -1
Query: 290 WCRTPGC 270
WCRTP C
Sbjct: 245 WCRTPCC 225
>gb|CN124528.1|CN124528 RHOH1_5_H07.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_5_H07_A002 3', mRNA sequence
Length = 754
Score = 155 bits (333), Expect(3) = 3e-069
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = +2 / +3
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
+V VTATN CP + + PS+DGGWCNPPR HFDMSQP +++I +Y GIVPV Y+RV+C++
Sbjct: 183 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 362
Query: 581 KGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
GG+RFTING+ YF LVL+ NV G G + AV +K
Sbjct: 363 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIK 464
Score = 85.8 bits (181), Expect(3) = 2e-031
Identities = 45/80 (56%), Positives = 50/80 (62%)
Frame = -2 / -1
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
L ST LK PLMVKR PP L TL *+TGTMP L*+ + + G DMSK RGGLH P
Sbjct: 424 LKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHP 245
Query: 462 PSSXGSALLGGQKLVAVTTT 403
PS G G +LVAVT T
Sbjct: 244 PSLLGWE*SAGHRLVAVTVT 185
Score = 76.2 bits (160), Expect(3) = 3e-069
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2 / +3
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQ 865
S GW +SRNWG NWQ+N+ L Q++SFRVT ++GR + N A W GQTF+ Q
Sbjct: 471 STGWITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQTFTNGQ 644
Score = 72.1 bits (151), Expect(3) = 3e-069
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2 / +3
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCD 364
YGNLYS GYGT+TAALS A+FN G +CG C++V+CD
Sbjct: 42 YGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCD 149
Score = 59.7 bits (124), Expect(3) = 2e-031
Identities = 26/56 (46%), Positives = 30/56 (53%)
Frame = -2 / -1
Query: 864 WAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
W +KVWP Q A L S P + VTRK+ C RS+L CQ PQ RD HP
Sbjct: 643 WPLVKVWPSCQLDPATL*NSRNLPLVAVTRKEMLCLVRSLLACQLAPQFRDMVIHP 476
Score = 30.4 bits (60), Expect(3) = 2e-031
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -2
Query: 302 APPCWCRTPGCRGC 261
APPC CRTP GC
Sbjct: 87 APPCPCRTPPSTGC 46
>gb|BG556323.1|BG556323 EM1_68_E09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 653
Score = 177 bits (382), Expect(4) = 5e-068
Identities = 72/78 (92%), Positives = 75/78 (96%)
Frame = +2 / +3
Query: 644 VEGAGDVHAVAVKADRSPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAA 823
V GAGDVHAVAVK +RS GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSV+SNNAA
Sbjct: 3 VGGAGDVHAVAVKGERSAGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVVSNNAA 182
Query: 824 PRGWSFGQTFSGAQFN*T 877
PRGW+FGQTFSGAQFN*T
Sbjct: 183 PRGWAFGQTFSGAQFN*T 236
Score = 144 bits (309), Expect(4) = 4e-056
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = -2 / -2
Query: 876 VQLNWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
VQLNWAPLKVWPK QPRGAALLE+TERPSLVVTR + ACPSRSVLLCQFWPQLRD ACHP
Sbjct: 235 VQLNWAPLKVWPKAQPRGAALLETTERPSLVVTRNESACPSRSVLLCQFWPQLRDSACHP 56
Query: 696 GER 688
ER
Sbjct: 55 AER 47
Score = 81.3 bits (171), Expect(5) = 2e-037
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1 / -1
Query: 763 LPVQERVALPVLAPVARQGLPPGGAVGLHGNRVHVAGAFH 644
LPVQERVALPVLAPVARQ LPP GA+ LHG+RVHVAGA H
Sbjct: 122 LPVQERVALPVLAPVARQRLPPRGALALHGHRVHVAGAAH 3
Score = 72.1 bits (151), Expect(4) = 5e-068
Identities = 30/45 (66%), Positives = 30/45 (66%)
Frame = +1 / +2
Query: 1066 VLVFLGCIRLGNWRWW*GWSADKRRQAALYHPPIMRLGPHGDGSF 1200
VL FLGC LG GW D RRQAALYHPPI R GPHGDG F
Sbjct: 461 VLAFLGCFGLGIGSGGKGWLGD*RRQAALYHPPIKRFGPHGDGLF 595
Score = 68.4 bits (143), Expect(4) = 4e-056
Identities = 30/45 (66%), Positives = 31/45 (68%)
Frame = -3 / -3
Query: 1199 KEPSP*GPKRIIGG*YKAACLRLSADQPYHHLQFPSRIQPRNTKT 1065
K PSP*GPKR+IGG*YKAACLR S QP L P QPRN T
Sbjct: 594 KRPSP*GPKRLIGG*YKAACLR*SPSQPLPPLPIPKPKQPRNANT 460
Score = 61.6 bits (128), Expect(5) = 2e-037
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -1 / -1
Query: 1201 RRSHHHEALNA*LAGDTRQPASVYLQTSLTTTSNFQAGYNQGTLKH 1064
+R HHHEA NA*LAGDTR+PASV LQ SL F + N GT H
Sbjct: 596 KRGHHHEAQNA*LAGDTRRPASVNLQASLYHHFQFPSRNNPGTPTH 459
Score = 48.7 bits (100), Expect(6) = 2e-028
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 700 VAGPVAQLGPELAEQHAPGRA 762
VAG VAQLGPELAEQHAPGRA
Sbjct: 59 VAGAVAQLGPELAEQHAPGRA 121
Score = 43.7 bits (89), Expect(6) = 2e-028
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +3 / +1
Query: 1116 RLVCR*TEAGCLVSPANYAFRASW*WLL 1199
RL R TEAG LVSPAN AF ASW*W L
Sbjct: 511 RLAWRLTEAGRLVSPAN*AFWASW*WPL 594
Score = 40.5 bits (82), Expect(4) = 5e-068
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +2 / +2
Query: 923 VVPSTPIGACREAPWFYEWSAPRICSWELPVV 1018
VV PIGACRE + A RI SWELPVV
Sbjct: 320 VVGPPPIGACRERRHGFMSGASRIGSWELPVV 415
Score = 37.7 bits (76), Expect(6) = 2e-028
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 937 PDWSLPRGAMVL*MVCTSHLLLGITSS 1017
P+WSLPR A C SH LLGITSS
Sbjct: 334 PNWSLPREAPWFYEWCISHWLLGITSS 414
Score = 36.8 bits (74), Expect(4) = 4e-056
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1 / -2
Query: 1018 NYW*FPGANARCRPFIKPWRLSAGS 944
NYW*FPGANARC LSA S
Sbjct: 415 NYW*FPGANARCTTHKTMAPLSASS 341
Score = 34.5 bits (69), Expect(5) = 2e-037
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3 / -1
Query: 1019 KLLVIPRSKCEVQTIHKTMAPLGRLQSGWTEQL 921
KLLVIPRS+CE+ A LG+LQ G +L
Sbjct: 416 KLLVIPRSQCEMHHS*NHGASLGKLQLGVDRRL 318
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 1081 GCIRLGNWRWW* 1116
G RLGNW+WW*
Sbjct: 475 GLFRLGNWKWW* 510
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 841 RPDFQRCPVQLNTPPPFMQR 900
RPD QR PVQLNT P R
Sbjct: 200 RPDLQRRPVQLNTRHPVRSR 259
Score = 29.9 bits (59), Expect(5) = 2e-037
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 877 CSVELGTAESLAERP 833
CSVELG AE LAE P
Sbjct: 236 CSVELGAAEGLAEGP 192
Score = 27.6 bits (54), Expect(4) = 4e-056
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 1063 HANASTIKPALLLGL 1019
H STIKPAL+LGL
Sbjct: 461 HTMPSTIKPALILGL 417
Score = 27.2 bits (53), Expect(4) = 5e-068
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 1017 FRPSNSAGFIVLAL 1058
FRPS SAGFIVL +
Sbjct: 415 FRPSISAGFIVLGM 456
Score = 24.0 bits (46), Expect(6) = 2e-028
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1018 LGLVIARVLSC 1050
LGLV+A+VLSC
Sbjct: 416 LGLVLAQVLSC 448
Score = 23.5 bits (45), Expect(5) = 2e-037
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 1052 KHDKTRAITRPK 1017
+HDKT A TRPK
Sbjct: 450 QHDKTCANTRPK 415
>gb|CW214676.1|CW214676 104_646_11194139_148_37052_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11194139, DNA
sequence
Length = 640
Score = 155 bits (333), Expect(3) = 1e-067
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = +2 / +1
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
+V VTATN CP + + PS+DGGWCNPPR HFDMSQP +++I +Y GIVPV Y+RV+C++
Sbjct: 193 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 372
Query: 581 KGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
GG+RFTING+ YF LVL+ NV G G + AV +K
Sbjct: 373 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIK 474
Score = 85.8 bits (181), Expect(3) = 1e-029
Identities = 45/80 (56%), Positives = 50/80 (62%)
Frame = -2 / -3
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
L ST LK PLMVKR PP L TL *+TGTMP L*+ + + G DMSK RGGLH P
Sbjct: 434 LKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHP 255
Query: 462 PSSXGSALLGGQKLVAVTTT 403
PS G G +LVAVT T
Sbjct: 254 PSLLGWE*SAGHRLVAVTVT 195
Score = 72.1 bits (151), Expect(3) = 1e-067
Identities = 25/36 (69%), Positives = 31/36 (86%)
Frame = +2 / +1
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCD 364
YGNLYS GYGT+TAALS A+FN G +CG C++V+CD
Sbjct: 52 YGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCD 159
Score = 70.7 bits (148), Expect(3) = 1e-067
Identities = 27/53 (50%), Positives = 35/53 (66%)
Frame = +2 / +1
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQT 850
S GW +SRNWG NWQ+N+ L Q++SFRVT ++GR + N A W GQT
Sbjct: 481 STGWITMSRNWGANWQANSDLTRQSISFRVTATNGRFLEFYNVAGSNWQLGQT 639
Score = 53.8 bits (111), Expect(3) = 1e-029
Identities = 24/51 (47%), Positives = 27/51 (52%)
Frame = -2 / -3
Query: 849 VWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
VWP Q A L S P + VTRK+ C RS+L CQ PQ RD HP
Sbjct: 638 VWPSCQLDPATL*NSRNLPLVAVTRKEMLCLVRSLLACQLAPQFRDMVIHP 486
Score = 30.4 bits (60), Expect(3) = 1e-029
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 302 APPCWCRTPGCRGC 261
APPC CRTP GC
Sbjct: 97 APPCPCRTPPSTGC 56
>gb|BI075831.1|BI075831 IP1_21_G05.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 646
Score = 190 bits (410), Expect(3) = 2e-067
Identities = 72/88 (81%), Positives = 78/88 (88%)
Frame = +2 / +3
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
GRSCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM++P F IA YRAGIVPV++
Sbjct: 381 GRSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAF 560
Query: 560 RRVACNKKGGIRFTINGHSYFNLVLVTN 643
RRV C KKGGIRFTINGHSYFNLVLVTN
Sbjct: 561 RRVPCVKKGGIRFTINGHSYFNLVLVTN 644
Score = 131 bits (281), Expect(3) = 8e-042
Identities = 61/88 (69%), Positives = 62/88 (70%)
Frame = -2 / -1
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LVTSTRLK*E PLMV RMPPF H TL TGTMPA AM G MSK RGGLHQP
Sbjct: 643 LVTSTRLK*ECPLMVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQP 464
Query: 462 PSSXGSALLGGQKLVAVTTTEPGRHERP 379
PSS G LGGQKLVAVT PGRH+RP
Sbjct: 463 PSSLGRP*LGGQKLVAVTVMVPGRHDRP 380
Score = 61.1 bits (127), Expect(3) = 2e-067
Identities = 25/43 (58%), Positives = 25/43 (58%)
Frame = +2 / +2
Query: 176 GGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAAL 304
G G W SAHATFY YGNLYS GYGTNTAAL
Sbjct: 185 GYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAAL 313
Score = 48.7 bits (100), Expect(3) = 8e-042
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -1 / -1
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRATSER 170
P AV+VAVP R AH AGR+AAAVE GV P A + R
Sbjct: 289 PGAVQVAVPARAAHCAGRVAAAVERGVRALPPAVAAR 179
Score = 46.0 bits (94), Expect(3) = 2e-067
Identities = 15/22 (68%), Positives = 20/22 (90%)
Frame = +2 / +3
Query: 308 TALFNNGLSCGACFEVRCDAAG 373
TALFN+G +CG+C+E+RCD AG
Sbjct: 318 TALFNDGAACGSCYELRCDNAG 383
Score = 30.9 bits (61), Expect(3) = 8e-042
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -3
Query: 302 APPCWCRTPGCRGC 261
APPC CRT C GC
Sbjct: 311 APPCSCRTRCCTGC 270
>gb|CN142714.1|CN142714 WOUND1_11_F01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_11_F01_A002 5', mRNA sequence
Length = 665
Score = 170 bits (365), Expect(2) = 2e-067
Identities = 64/82 (78%), Positives = 71/82 (86%)
Frame = +2 / +1
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
S++VTATNFCPPN ALPSDDGGWCNPPR HFD++ P+F IA YRAGIVPVSYRRV C K
Sbjct: 415 SILVTATNFCPPNYALPSDDGGWCNPPRPHFDLAMPMFLHIAEYRAGIVPVSYRRVPCRK 594
Query: 581 KGGIRFTINGHSYFNLVLVTNV 646
GG+RFTING YFNLVL+TNV
Sbjct: 595 SGGVRFTINGFRYFNLVLITNV 660
Score = 109 bits (232), Expect(3) = 9e-038
Identities = 54/80 (67%), Positives = 54/80 (67%)
Frame = -2 / -1
Query: 639 VTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPP 460
V STRLK PLMV R PP H T R*ETGTMPA SAM N G SK RGGLHQPP
Sbjct: 653 VISTRLKYRKPLMVNRTPPDFRHGTRR*ETGTMPARYSAMWRNMGMARSKCGRGGLHQPP 474
Query: 459 SSXGSALLGGQKLVAVTTTE 400
SS GSA GGQKLVAVT E
Sbjct: 473 SSEGSA*FGGQKLVAVTRME 414
Score = 108 bits (230), Expect(2) = 2e-067
Identities = 42/67 (62%), Positives = 45/67 (67%)
Frame = +2 / +1
Query: 176 GGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEV 355
GGG W SAHATFY YGNLYSQGYG N AALSTALFN GLSCGACFE+
Sbjct: 187 GGGGWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNNAALSTALFNEGLSCGACFEL 366
Query: 356 RCDAAGG 376
+C+ G
Sbjct: 367 KCENQPG 387
Score = 46.0 bits (94), Expect(3) = 9e-038
Identities = 18/35 (51%), Positives = 19/35 (54%)
Frame = -2 / -1
Query: 363 SHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLP 259
SH +SK APQLRP PYPWL RLP
Sbjct: 374 SHLSSKHAPQLRPSLNSAVLSAALFTPYPWLYRLP 270
Score = 42.3 bits (86), Expect(3) = 9e-038
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1 / -3
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRATS 176
PLAV+VA+ R AHGA + AAVE GV P A +
Sbjct: 291 PLAVQVAIAARAAHGARGVTAAVERGVRALPAAAA 187
>gb|CW392760.1|CW392760 fsbb001f079i10f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f079i10, DNA
sequence
Length = 564
Score = 256 bits (554), Expect = 5e-067
Identities = 102/117 (87%), Positives = 104/117 (88%)
Frame = +2 / +3
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPP 436
YGNLYSQGYGTNTAALSTALFN+GLSCGACFEVRCDAAGGG SCLPGSVVVTATNFCPP
Sbjct: 24 YGNLYSQGYGTNTAALSTALFNSGLSCGACFEVRCDAAGGGSHSCLPGSVVVTATNFCPP 203
Query: 437 NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTIN 607
NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRR F I+
Sbjct: 204 NNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRSVVKSTRWFLFAIS 374
Score = 205 bits (443), Expect(2) = 2e-063
Identities = 87/103 (84%), Positives = 87/103 (84%)
Frame = -2 / -3
Query: 564 LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTTEPGRHE 385
LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSS GSALLGGQKLVAVTTTEPGRHE
Sbjct: 331 LR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSEGSALLGGQKLVAVTTTEPGRHE 152
Query: 384 RPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
PPPAAS RTSKQAPQLRP VPYPWL*RLPY
Sbjct: 151 WLPPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPY 23
Score = 72.5 bits (152), Expect(4) = 1e-033
Identities = 29/30 (96%), Positives = 29/30 (96%)
Frame = +2 / +2
Query: 563 RVACNKKGGIRFTINGHSYFNLVLVTNVEG 652
RVACNKKGGIRFTINGHSYFNLVLVTNV G
Sbjct: 473 RVACNKKGGIRFTINGHSYFNLVLVTNVGG 562
Score = 62.0 bits (129), Expect(2) = 2e-063
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = -2 / -1
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR 559
LVTSTRLK*EWPL+V RMPPFLLHATL+
Sbjct: 552 LVTSTRLK*EWPLIVNRMPPFLLHATLQ 469
Score = 58.3 bits (121), Expect(4) = 6e-022
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = -1 / -2
Query: 565 PAVGDGNNAGPVERDALEHGLRH 497
PAVGDG+NAGPVERDALEHGLRH
Sbjct: 332 PAVGDGDNAGPVERDALEHGLRH 264
Score = 56.1 bits (116), Expect(4) = 1e-033
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +3 / +1
Query: 498 CRSPCSSASRSTGPALFPSPTAG 566
CRSPCSSASRSTGPAL PSPTAG
Sbjct: 265 CRSPCSSASRSTGPALSPSPTAG 333
Score = 50.1 bits (103), Expect(4) = 1e-033
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / +2
Query: 262 QPLQPGVRHQHGGAEHGA 315
QPLQPGVRHQHGGAEHGA
Sbjct: 29 QPLQPGVRHQHGGAEHGA 82
Score = 48.3 bits (99), Expect(4) = 6e-022
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -3 / -1
Query: 302 APPCWCRTPGCRGC 261
APPCWCRTPGCRGC
Sbjct: 69 APPCWCRTPGCRGC 28
Score = 36.3 bits (73), Expect(4) = 6e-022
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = -3 / -2
Query: 626 G*SRSGR*W*NVCRPSCCT 570
G*SR+GR* * CRPSCCT
Sbjct: 536 G*SRNGR*L*TGCRPSCCT 480
Score = 27.2 bits (53), Expect(4) = 1e-033
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 388 VSAGLRRGDGH 420
V AGLRRGDGH
Sbjct: 155 VPAGLRRGDGH 187
Score = 22.6 bits (43), Expect(4) = 6e-022
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -1
Query: 416 PSPRRSPA 393
PSPRRSPA
Sbjct: 183 PSPRRSPA 160
>gb|CF429238.1|CF429238 PH1_20_C06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_20_C06_A002 5', mRNA sequence
Length = 744
Score = 155 bits (333), Expect(3) = 2e-062
Identities = 57/94 (60%), Positives = 74/94 (78%)
Frame = +2 / +3
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
+V VTATN CP + + PS+DGGWCNPPR HFDMSQP +++I +Y GIVPV Y+RV+C++
Sbjct: 375 TVTVTATNLCPADYSQPSNDGGWCNPPRQHFDMSQPSWEKIGVYSGGIVPVFYQRVSCSR 554
Query: 581 KGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVK 682
GG+RFTING+ YF LVL+ NV G G + AV +K
Sbjct: 555 TGGVRFTINGNRYFKLVLIFNVAGPGSISAVQIK 656
Score = 85.8 bits (181), Expect(4) = 3e-027
Identities = 45/80 (56%), Positives = 50/80 (62%)
Frame = -2 / -3
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
L ST LK PLMVKR PP L TL *+TGTMP L*+ + + G DMSK RGGLH P
Sbjct: 616 LKMSTSLKYLLPLMVKRTPPVLEQDTLW*KTGTMPPL*TPIFSHDGWDMSKCCRGGLHHP 437
Query: 462 PSSXGSALLGGQKLVAVTTT 403
PS G G +LVAVT T
Sbjct: 436 PSLLGWE*SAGHRLVAVTVT 377
Score = 81.7 bits (172), Expect(3) = 2e-062
Identities = 30/59 (50%), Positives = 36/59 (61%)
Frame = +2 / +3
Query: 188 WSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCD 364
W ATFY YGNLYS GYGT+TAALS A+FN G +CG C++V+CD
Sbjct: 165 WQRGSATFYGGANAAGTMGGACGYGNLYSAGYGTDTAALSLAMFNGGAACGECYQVKCD 341
Score = 43.7 bits (89), Expect(3) = 2e-062
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALS 772
S GW +SRNWG NWQ+N+ L Q++S
Sbjct: 663 STGWITMSRNWGANWQANSDLTRQSIS 743
Score = 32.2 bits (64), Expect(4) = 3e-027
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = -2 / -3
Query: 762 CPSRSVLLCQFWPQLRDRACHP 697
C RS+L CQ PQ RD HP
Sbjct: 733 CLVRSLLACQLAPQFRDMVIHP 668
Score = 30.4 bits (60), Expect(4) = 3e-027
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVE 209
P V+VA+P R H AG + AVE
Sbjct: 257 PRRVQVAIPARATHCAGGVGPAVE 186
Score = 30.4 bits (60), Expect(4) = 3e-027
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3 / -1
Query: 302 APPCWCRTPGCRGC 261
APPC CRTP GC
Sbjct: 279 APPCPCRTPPSTGC 238
>gb|CN144206.1|CN144206 WOUND1_20_G04.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_20_G04_A002 5', mRNA sequence
Length = 607
Score = 156 bits (335), Expect(2) = 5e-062
Identities = 58/75 (77%), Positives = 65/75 (86%)
Frame = +2 / +1
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
GRSCLPG++ VTATNFCPPN LPSD+GGWCNPPR HFDM++P F IA YRAGIVPV++
Sbjct: 382 GRSCLPGTITVTATNFCPPNYGLPSDNGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAF 561
Query: 560 RRVACNKKGGIRFTI 604
RRV C KKGGIRFTI
Sbjct: 562 RRVPCVKKGGIRFTI 606
Score = 105 bits (224), Expect(3) = 2e-035
Identities = 48/75 (64%), Positives = 49/75 (65%)
Frame = -2 / -3
Query: 603 MVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQK 424
MV RMPPF H TL TGTMPA AM G MSK RGGLHQPP S G LGGQK
Sbjct: 605 MVNRMPPFFTHGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPLSLGRP*LGGQK 426
Query: 423 LVAVTTTEPGRHERP 379
LVAVT PGRH+RP
Sbjct: 425 LVAVTVMVPGRHDRP 381
Score = 104 bits (221), Expect(2) = 5e-062
Identities = 40/66 (60%), Positives = 46/66 (69%)
Frame = +2 / +1
Query: 176 GGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEV 355
G G W SAHATFY YGNLYS GYGTNTAALSTALFN+G +CG+C+++
Sbjct: 187 GYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYKL 366
Query: 356 RCDAAG 373
RCD AG
Sbjct: 367 RCDNAG 384
Score = 48.7 bits (100), Expect(3) = 2e-035
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRATSER 170
P AV+VAVP R AH AGR+AAAVE GV P A + R
Sbjct: 291 PGAVQVAVPARAAHCAGRVAAAVERGVRALPPAVAAR 181
Score = 35.4 bits (71), Expect(3) = 2e-035
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -2 / -3
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
PA SHR+ Q P P VPYP L RLPY
Sbjct: 383 PALSHRSL*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPY 267
>gb|BG355810.1|BG355810 EM1_17_A05.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 611
Score = 154 bits (330), Expect(4) = 6e-061
Identities = 61/66 (92%), Positives = 64/66 (96%)
Frame = +2 / +3
Query: 680 KADRSPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSG 859
K +RS GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSV+SNNAAPRGW+FGQTFSG
Sbjct: 3 KGERSAGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSG 182
Query: 860 AQFN*T 877
AQFN*T
Sbjct: 183 AQFN*T 200
Score = 144 bits (309), Expect(4) = 4e-056
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = -2 / -2
Query: 876 VQLNWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
VQLNWAPLKVWPK QPRGAALLE+TERPSLVVTR + ACPSRSVLLCQFWPQLRD ACHP
Sbjct: 199 VQLNWAPLKVWPKAQPRGAALLETTERPSLVVTRNESACPSRSVLLCQFWPQLRDSACHP 20
Query: 696 GER 688
ER
Sbjct: 19 AER 11
Score = 72.1 bits (151), Expect(4) = 6e-061
Identities = 30/45 (66%), Positives = 30/45 (66%)
Frame = +1 / +2
Query: 1066 VLVFLGCIRLGNWRWW*GWSADKRRQAALYHPPIMRLGPHGDGSF 1200
VL FLGC LG GW D RRQAALYHPPI R GPHGDG F
Sbjct: 425 VLAFLGCFGLGIGSGGKGWLGD*RRQAALYHPPIKRFGPHGDGLF 559
Score = 68.4 bits (143), Expect(4) = 4e-056
Identities = 30/45 (66%), Positives = 31/45 (68%)
Frame = -3 / -3
Query: 1199 KEPSP*GPKRIIGG*YKAACLRLSADQPYHHLQFPSRIQPRNTKT 1065
K PSP*GPKR+IGG*YKAACLR S QP L P QPRN T
Sbjct: 558 KRPSP*GPKRLIGG*YKAACLR*SPSQPLPPLPIPKPKQPRNANT 424
Score = 62.0 bits (129), Expect(5) = 5e-030
Identities = 29/54 (53%), Positives = 34/54 (62%)
Frame = -1 / -1
Query: 1225 NNSENISSRRSHHHEALNA*LAGDTRQPASVYLQTSLTTTSNFQAGYNQGTLKH 1064
+N + +R HHHEA NA*LAGDTR+PASV LQ SL F + N GT H
Sbjct: 584 HNHKTSLLKRGHHHEAQNA*LAGDTRRPASVNLQASLYHHFQFPSRNNPGTPTH 423
Score = 55.6 bits (115), Expect(5) = 5e-030
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = -1 / -1
Query: 763 LPVQERVALPVLAPVARQGLPPGGAVGL 680
LPVQERVALPVLAPVARQ LPP GA+ L
Sbjct: 86 LPVQERVALPVLAPVARQRLPPRGALAL 3
Score = 48.7 bits (100), Expect(6) = 2e-028
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / +2
Query: 700 VAGPVAQLGPELAEQHAPGRA 762
VAG VAQLGPELAEQHAPGRA
Sbjct: 23 VAGAVAQLGPELAEQHAPGRA 85
Score = 43.7 bits (89), Expect(6) = 2e-028
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +3 / +1
Query: 1116 RLVCR*TEAGCLVSPANYAFRASW*WLL 1199
RL R TEAG LVSPAN AF ASW*W L
Sbjct: 475 RLAWRLTEAGRLVSPAN*AFWASW*WPL 558
Score = 40.5 bits (82), Expect(4) = 6e-061
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +2 / +2
Query: 923 VVPSTPIGACREAPWFYEWSAPRICSWELPVV 1018
VV PIGACRE + A RI SWELPVV
Sbjct: 284 VVGPPPIGACRERRHGFMSGASRIGSWELPVV 379
Score = 37.7 bits (76), Expect(6) = 2e-028
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / +1
Query: 937 PDWSLPRGAMVL*MVCTSHLLLGITSS 1017
P+WSLPR A C SH LLGITSS
Sbjct: 298 PNWSLPREAPWFYEWCISHWLLGITSS 378
Score = 36.8 bits (74), Expect(4) = 4e-056
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1 / -2
Query: 1018 NYW*FPGANARCRPFIKPWRLSAGS 944
NYW*FPGANARC LSA S
Sbjct: 379 NYW*FPGANARCTTHKTMAPLSASS 305
Score = 34.5 bits (69), Expect(5) = 5e-030
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3 / -1
Query: 1019 KLLVIPRSKCEVQTIHKTMAPLGRLQSGWTEQL 921
KLLVIPRS+CE+ A LG+LQ G +L
Sbjct: 380 KLLVIPRSQCEMHHS*NHGASLGKLQLGVDRRL 282
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / +1
Query: 1081 GCIRLGNWRWW* 1116
G RLGNW+WW*
Sbjct: 439 GLFRLGNWKWW* 474
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / +2
Query: 841 RPDFQRCPVQLNTPPPFMQR 900
RPD QR PVQLNT P R
Sbjct: 164 RPDLQRRPVQLNTRHPVRSR 223
Score = 29.9 bits (59), Expect(5) = 5e-030
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 877 CSVELGTAESLAERP 833
CSVELG AE LAE P
Sbjct: 200 CSVELGAAEGLAEGP 156
Score = 27.6 bits (54), Expect(4) = 4e-056
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / -1
Query: 1063 HANASTIKPALLLGL 1019
H STIKPAL+LGL
Sbjct: 425 HTMPSTIKPALILGL 381
Score = 27.2 bits (53), Expect(4) = 6e-061
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / +1
Query: 1017 FRPSNSAGFIVLAL 1058
FRPS SAGFIVL +
Sbjct: 379 FRPSISAGFIVLGM 420
Score = 24.0 bits (46), Expect(6) = 2e-028
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / +2
Query: 1018 LGLVIARVLSC 1050
LGLV+A+VLSC
Sbjct: 380 LGLVLAQVLSC 412
Score = 23.5 bits (45), Expect(5) = 5e-030
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 1052 KHDKTRAITRPK 1017
+HDKT A TRPK
Sbjct: 414 QHDKTCANTRPK 379
>gb|CW079162.1|CW079162 104_398_10899280_114_32367_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899280, DNA
sequence
Length = 685
Score = 233 bits (503), Expect = 5e-060
Identities = 86/145 (59%), Positives = 109/145 (75%)
Frame = +2 / +1
Query: 422 NFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFT 601
NFCPPN AL S+ GGWCNPPR HFDM+QP ++RI +Y+ GIVPV +RRV C ++GG+RFT
Sbjct: 1 NFCPPNYALASNGGGWCNPPRQHFDMAQPAWERIGVYQGGIVPVLFRRVPCRRRGGVRFT 180
Query: 602 INGHSYFNLVLVTNVEGAGDVHAVAVKADRSPGWQALSRNWGQNWQSNTLLDGQALSFRV 781
++G YF LVLVTNV GAG V A+ V+ S GW +SRNWG NWQS L+GQ LSFRV
Sbjct: 181 VSGRDYFELVLVTNVAGAGAVRAMDVRGTSSAGWMPMSRNWGANWQSLAYLNGQGLSFRV 360
Query: 782 TTSDGRSVLSNNAAPRGWSFGQTFS 856
T DG++V+ + P W+FGQT++
Sbjct: 361 TADDGQTVVFADVVPPSWTFGQTYA 435
Score = 118 bits (252), Expect = 2e-025
Identities = 62/142 (43%), Positives = 68/142 (47%)
Frame = -2 / -3
Query: 849 VWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHPGERXXXXXX 670
V P G +T PS VTR + CP R CQ PQ D HP E
Sbjct: 428 VCPNVHDGGTTSANTTVCPSSAVTRNESPCPLRYARDCQLAPQFLDMGIHPAELVPLTSM 249
Query: 669 XXXXXXXXTLVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSK 490
TLVTST K* PL V R PP L T R TGT+P *+ +R + GC MSK
Sbjct: 248 ARTAPAPATLVTSTSSK*SLPLTVNRTPPRRLQGTRRNSTGTIPPW*TPIRSHAGCAMSK 69
Query: 489 WARGGLHQPPSSXGSALLGGQK 424
RGGLH PP SA LGGQK
Sbjct: 68 CCRGGLHHPPPLEASA*LGGQK 3
>gb|CL177979.1|CL177979 104_385_10894229_148_31913_293 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894229, DNA
sequence
Length = 731
Score = 147 bits (315), Expect(4) = 6e-059
Identities = 58/60 (96%), Positives = 60/60 (100%)
Frame = +2 / -2
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQFN*T 877
GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSV+SNNAAPRGW+FGQTFSGAQFN*T
Sbjct: 727 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVVSNNAAPRGWAFGQTFSGAQFN*T 548
Score = 139 bits (299), Expect(4) = 1e-054
Identities = 54/60 (90%), Positives = 56/60 (93%)
Frame = -2 / +3
Query: 876 VQLNWAPLKVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLRDRACHP 697
VQLNWAPLKVWPK QPRGAALLE+TERPSLVVTR + ACPSRSVLLCQFWPQLRD ACHP
Sbjct: 549 VQLNWAPLKVWPKAQPRGAALLETTERPSLVVTRNESACPSRSVLLCQFWPQLRDSACHP 728
Score = 72.1 bits (151), Expect(4) = 6e-059
Identities = 30/45 (66%), Positives = 30/45 (66%)
Frame = +1 / -1
Query: 1066 VLVFLGCIRLGNWRWW*GWSADKRRQAALYHPPIMRLGPHGDGSF 1200
VL FLGC LG GW D RRQAALYHPPI R GPHGDG F
Sbjct: 323 VLAFLGCFGLGIGSGGKGWLGD*RRQAALYHPPIKRFGPHGDGLF 189
Score = 68.4 bits (143), Expect(4) = 1e-054
Identities = 30/45 (66%), Positives = 31/45 (68%)
Frame = -3 / +1
Query: 1199 KEPSP*GPKRIIGG*YKAACLRLSADQPYHHLQFPSRIQPRNTKT 1065
K PSP*GPKR+IGG*YKAACLR S QP L P QPRN T
Sbjct: 190 KRPSP*GPKRLIGG*YKAACLR*SPSQPLPPLPIPKPKQPRNANT 324
Score = 61.6 bits (128), Expect(5) = 3e-028
Identities = 28/46 (60%), Positives = 31/46 (67%)
Frame = -1 / +2
Query: 1201 RRSHHHEALNA*LAGDTRQPASVYLQTSLTTTSNFQAGYNQGTLKH 1064
+R HHHEA NA*LAGDTR+PASV LQ SL F + N GT H
Sbjct: 188 KRGHHHEAQNA*LAGDTRRPASVNLQASLYHHFQFPSRNNPGTPTH 325
Score = 49.6 bits (102), Expect(5) = 3e-028
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -1 / +2
Query: 763 LPVQERVALPVLAPVARQGLPP 698
LPVQERVALPVLAPVARQ LPP
Sbjct: 662 LPVQERVALPVLAPVARQRLPP 727
Score = 48.7 bits (100), Expect(6) = 2e-028
Identities = 20/21 (95%), Positives = 20/21 (95%)
Frame = +1 / -1
Query: 700 VAGPVAQLGPELAEQHAPGRA 762
VAG VAQLGPELAEQHAPGRA
Sbjct: 725 VAGAVAQLGPELAEQHAPGRA 663
Score = 43.7 bits (89), Expect(6) = 2e-028
Identities = 21/28 (75%), Positives = 21/28 (75%)
Frame = +3 / -3
Query: 1116 RLVCR*TEAGCLVSPANYAFRASW*WLL 1199
RL R TEAG LVSPAN AF ASW*W L
Sbjct: 273 RLAWRLTEAGRLVSPAN*AFWASW*WPL 190
Score = 40.5 bits (82), Expect(4) = 6e-059
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +2 / -1
Query: 923 VVPSTPIGACREAPWFYEWSAPRICSWELPVV 1018
VV PIGACRE + A RI SWELPVV
Sbjct: 464 VVGPPPIGACRERRHGFMSGASRIGSWELPVV 369
Score = 37.7 bits (76), Expect(6) = 2e-028
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = +1 / -3
Query: 937 PDWSLPRGAMVL*MVCTSHLLLGITSS 1017
P+WSLPR A C SH LLGITSS
Sbjct: 450 PNWSLPREAPWFYEWCISHWLLGITSS 370
Score = 36.8 bits (74), Expect(4) = 1e-054
Identities = 16/25 (64%), Positives = 16/25 (64%)
Frame = -1 / +3
Query: 1018 NYW*FPGANARCRPFIKPWRLSAGS 944
NYW*FPGANARC LSA S
Sbjct: 369 NYW*FPGANARCTTHKTMAPLSASS 443
Score = 34.5 bits (69), Expect(5) = 3e-028
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -3 / +2
Query: 1019 KLLVIPRSKCEVQTIHKTMAPLGRLQSGWTEQL 921
KLLVIPRS+CE+ A LG+LQ G +L
Sbjct: 368 KLLVIPRSQCEMHHS*NHGASLGKLQLGVDRRL 466
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1 / -3
Query: 1081 GCIRLGNWRWW* 1116
G RLGNW+WW*
Sbjct: 309 GLFRLGNWKWW* 274
Score = 31.3 bits (62), Expect(6) = 2e-028
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +1 / -1
Query: 841 RPDFQRCPVQLNTPPPFMQR 900
RPD QR PVQLNT P R
Sbjct: 584 RPDLQRRPVQLNTRHPVRSR 525
Score = 29.9 bits (59), Expect(5) = 3e-028
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 877 CSVELGTAESLAERP 833
CSVELG AE LAE P
Sbjct: 548 CSVELGAAEGLAEGP 592
Score = 27.6 bits (54), Expect(4) = 1e-054
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 1063 HANASTIKPALLLGL 1019
H STIKPAL+LGL
Sbjct: 323 HTMPSTIKPALILGL 367
Score = 27.2 bits (53), Expect(4) = 6e-059
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 1017 FRPSNSAGFIVLAL 1058
FRPS SAGFIVL +
Sbjct: 369 FRPSISAGFIVLGM 328
Score = 24.0 bits (46), Expect(6) = 2e-028
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 1018 LGLVIARVLSC 1050
LGLV+A+VLSC
Sbjct: 368 LGLVLAQVLSC 336
Score = 23.5 bits (45), Expect(5) = 3e-028
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = -3 / +1
Query: 1052 KHDKTRAITRPK 1017
+HDKT A TRPK
Sbjct: 334 QHDKTCANTRPK 369
>gb|CW083024.1|CW083024 104_425_10944087_114_32388_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 711
Score = 113 bits (241), Expect(3) = 8e-059
Identities = 42/79 (53%), Positives = 57/79 (72%)
Frame = +2 / -2
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWC P R HFDMSQP ++RI +Y AG++PV Y++V C++ GG+RF I G YF LV +
Sbjct: 512 NGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNI 333
Query: 638 TNVEGAGDVHAVAVKADRS 694
N+ G+G V A VK DR+
Sbjct: 332 QNLGGSGSVGAAWVKGDRT 276
Score = 80.3 bits (169), Expect(3) = 8e-059
Identities = 30/62 (48%), Positives = 40/62 (64%)
Frame = +2 / -2
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPP 436
Y NLY+ GYG N AALS+ LFN+G SCG C+ + CDA+ GG+ C PG+ + + P
Sbjct: 710 YDNLYNAGYGVNNAALSSTLFNDGASCGQCYLITCDASRPGGQWCKPGNSITVSATNLCP 531
Query: 437 NN 442
N
Sbjct: 530 AN 525
Score = 74.8 bits (157), Expect(3) = 8e-059
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +2 / -2
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQ 865
GW +SRNWG NWQ+ L GQ LSF VTT+ G+ + N PR W FGQT++ Q
Sbjct: 275 GWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQ 108
>gb|CX620549.1|CX620549 GABR1_52_C02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_52_C02_A002 5', mRNA sequence
Length = 545
Score = 146 bits (314), Expect(2) = 5e-058
Identities = 54/69 (78%), Positives = 60/69 (86%)
Frame = +2 / +2
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 338 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 517
Query: 560 RRVACNKKG 586
RRV C KKG
Sbjct: 518 RRVPCVKKG 544
Score = 100 bits (213), Expect(2) = 5e-058
Identities = 38/64 (59%), Positives = 43/64 (67%)
Frame = +2 / +2
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN G +CG+C+E+RC
Sbjct: 149 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNGGAACGSCYELRC 328
Query: 362 DAAG 373
D G
Sbjct: 329 DNDG 340
Score = 97.7 bits (207), Expect(3) = 1e-030
Identities = 44/69 (63%), Positives = 46/69 (66%)
Frame = -2 / -3
Query: 585 PFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTT 406
PF H TL * TGTMPA A+ GC MSK RGGLHQPPSS G LGGQKLVAVT
Sbjct: 543 PFFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTV 364
Query: 405 TEPGRHERP 379
PGRH+ P
Sbjct: 363 MVPGRHDCP 337
Score = 47.3 bits (97), Expect(3) = 1e-030
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 247 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 149
Score = 28.6 bits (56), Expect(3) = 1e-030
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -3 / -1
Query: 302 APPCWCRTPGC 270
APPC CRTP C
Sbjct: 269 APPCSCRTPCC 237
>gb|CW083023.1|CW083023 104_425_10944087_114_32352_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10944087, DNA
sequence
Length = 704
Score = 113 bits (241), Expect(3) = 5e-058
Identities = 42/79 (53%), Positives = 57/79 (72%)
Frame = +2 / -1
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWC P R HFDMSQP ++RI +Y AG++PV Y++V C++ GG+RF I G YF LV +
Sbjct: 512 NGGWCGPGRPHFDMSQPAWERIGIYSAGVIPVLYQQVKCSRTGGVRFGIAGSQYFLLVNI 333
Query: 638 TNVEGAGDVHAVAVKADRS 694
N+ G+G V A VK DR+
Sbjct: 332 QNLGGSGSVGAAWVKGDRT 276
Score = 77.6 bits (163), Expect(3) = 5e-058
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +2 / -1
Query: 263 NLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPPNN 442
NLY+ GYG N AALS+ LFN+G SCG C+ + CDA+ GG+ C PG+ + + P N
Sbjct: 704 NLYNAGYGVNNAALSSTLFNDGASCGQCYLITCDASRPGGQWCKPGNSITVSATNLCPAN 525
Score = 74.8 bits (157), Expect(3) = 5e-058
Identities = 29/56 (51%), Positives = 36/56 (64%)
Frame = +2 / -1
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQ 865
GW +SRNWG NWQ+ L GQ LSF VTT+ G+ + N PR W FGQT++ Q
Sbjct: 275 GWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVPRWWQFGQTYTTTQ 108
>gb|CW408701.1|CW408701 fsbb001f102l07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102l07, DNA
sequence
Length = 685
Score = 104 bits (221), Expect(3) = 1e-057
Identities = 39/75 (52%), Positives = 54/75 (72%)
Frame = +2 / -1
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWC P R HFDMSQP +++I + + GI+PV Y++V C++ GG+RF I G SYF LV +
Sbjct: 442 NGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNI 263
Query: 638 TNVEGAGDVHAVAVK 682
N+ G+G V A VK
Sbjct: 262 QNLGGSGSVGAAWVK 218
Score = 82.6 bits (174), Expect(3) = 1e-057
Identities = 31/62 (50%), Positives = 37/62 (59%)
Frame = +2 / -1
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPP 436
YGNLYS GYG N AALS LFN+G SCG C+ + CD + G + C PG+ V P
Sbjct: 640 YGNLYSAGYGVNNAALSQTLFNDGASCGQCYTITCDGSRSGSQYCKPGNTVTVTATNLCP 461
Query: 437 NN 442
N
Sbjct: 460 PN 455
Score = 78.0 bits (164), Expect(3) = 1e-057
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -1
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQ 865
GW +SRNWG NWQ+ + L GQALSF VTT+ G+ + N AP W FGQT+S Q
Sbjct: 205 GWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQ 38
>gb|BE917749.1|BE917749 OV1_6_F07.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 581
Score = 138 bits (297), Expect(2) = 2e-057
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = +2 / +1
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
GRSCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM++P F IA YRAGIVPV++
Sbjct: 382 GRSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAF 561
Query: 560 RRVAC 574
RRV C
Sbjct: 562 RRVPC 576
Score = 105 bits (225), Expect(2) = 2e-057
Identities = 41/66 (62%), Positives = 46/66 (69%)
Frame = +2 / +1
Query: 176 GGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEV 355
G G W SAHATFY YGNLYS GYGTNTAALSTALFN+G +CG+C+E+
Sbjct: 187 GYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYEL 366
Query: 356 RCDAAG 373
RCD AG
Sbjct: 367 RCDNAG 384
Score = 90.9 bits (192), Expect(3) = 6e-032
Identities = 42/65 (64%), Positives = 43/65 (66%)
Frame = -2 / -1
Query: 573 HATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTTEPG 394
H TL TGTMPA AM G MSK RGGLHQPPSS G LGGQKLVAVT PG
Sbjct: 575 HGTLLKATGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 396
Query: 393 RHERP 379
RH+RP
Sbjct: 395 RHDRP 381
Score = 48.7 bits (100), Expect(3) = 6e-032
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -1 / -3
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRATSER 170
P AV+VAVP R AH AGR+AAAVE GV P A + R
Sbjct: 291 PGAVQVAVPARAAHCAGRVAAAVERGVRALPPAVAAR 181
Score = 38.2 bits (77), Expect(3) = 6e-032
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -1
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
PA SHR+S Q P P VPYP L RLPY
Sbjct: 383 PALSHRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPY 267
>gb|BG355452.1|BG355452 EM1_16_F05.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 144 bits (308), Expect(2) = 2e-057
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +2 / +3
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 339 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 518
Query: 560 RRVACNKK 583
RRV C KK
Sbjct: 519 RRVPCVKK 542
Score = 100 bits (214), Expect(2) = 2e-057
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +3
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 150 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 329
Query: 362 DAAG 373
D G
Sbjct: 330 DNDG 341
Score = 94.5 bits (200), Expect(3) = 9e-030
Identities = 43/68 (63%), Positives = 45/68 (66%)
Frame = -2 / -2
Query: 582 FLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTT 403
F H TL * TGTMPA A+ GC MSK RGGLHQPPSS G LGGQKLVAVT
Sbjct: 541 FFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 362
Query: 402 EPGRHERP 379
PGRH+ P
Sbjct: 361 VPGRHDCP 338
Score = 47.3 bits (97), Expect(3) = 9e-030
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -1
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 248 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 150
Score = 28.6 bits (56), Expect(3) = 9e-030
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -2
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 340 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 224
>gb|BG052144.1|BG052144 RHIZ2_6_F11.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 539
Score = 144 bits (308), Expect(2) = 2e-057
Identities = 53/68 (77%), Positives = 59/68 (86%)
Frame = +2 / +3
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 336 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 515
Query: 560 RRVACNKK 583
RRV C KK
Sbjct: 516 RRVPCVKK 539
Score = 100 bits (214), Expect(2) = 2e-057
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +3
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 147 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 326
Query: 362 DAAG 373
D G
Sbjct: 327 DNDG 338
Score = 94.5 bits (200), Expect(3) = 9e-030
Identities = 43/68 (63%), Positives = 45/68 (66%)
Frame = -2 / -2
Query: 582 FLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTT 403
F H TL * TGTMPA A+ GC MSK RGGLHQPPSS G LGGQKLVAVT
Sbjct: 538 FFTHGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVM 359
Query: 402 EPGRHERP 379
PGRH+ P
Sbjct: 358 VPGRHDCP 335
Score = 47.3 bits (97), Expect(3) = 9e-030
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -1
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 245 PRAVHVPVPTRAAHCAGRVAAAVERGVGTLPSA 147
Score = 28.6 bits (56), Expect(3) = 9e-030
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -2
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 337 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 221
>gb|BG556164.1|BG556164 EM1_68_E09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 550
Score = 221 bits (478), Expect(2) = 3e-057
Identities = 90/120 (75%), Positives = 92/120 (76%)
Frame = +2 / +1
Query: 95 PFALSRGLRLGHHRAQPHPRPHGHAPLGGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYS 274
P A GL H R P +PHGHAPLGGGAWSSAHATFY YGNLYS
Sbjct: 190 PHAHGLGLGHHHPRPHPQQQPHGHAPLGGGAWSSAHATFYGGGDASGTMGGACGYGNLYS 369
Query: 275 QGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPPNNALPS 454
QGYGTNTAALSTALFN+GLSCGACFEVRCDAAGGG SCLPGSVVVTATNFCPPNNALPS
Sbjct: 370 QGYGTNTAALSTALFNSGLSCGACFEVRCDAAGGGSHSCLPGSVVVTATNFCPPNNALPS 549
Score = 115 bits (246), Expect(3) = 4e-042
Identities = 50/65 (76%), Positives = 50/65 (76%)
Frame = -2 / -3
Query: 450 GSALLGGQKLVAVTTTEPGRHERPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL 271
GSALLGGQKLVAVTTTEPGRHE PPPAAS RTSKQAPQLRP VPYPWL
Sbjct: 545 GSALLGGQKLVAVTTTEPGRHEWLPPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL 366
Query: 270 *RLPY 256
*RLPY
Sbjct: 365 *RLPY 351
Score = 105 bits (224), Expect(2) = 4e-025
Identities = 49/86 (56%), Positives = 50/86 (58%)
Frame = -1 / -2
Query: 412 HHDGXXXXXXXXXXXXXAPHLXXXXXXXXXXXXXXXXXXXXXXVPLAVEVAVPTRPAHGA 233
HHDG A HL VPLAVEVAVPTRPAHGA
Sbjct: 507 HHDGARQARVAPAARRVAAHLEAGAAAEAAVEERRAQRRRVGAVPLAVEVAVPTRPAHGA 328
Query: 232 GRIAAAVEGGVSRGPRATSERCVAVR 155
GR+AAAVEGGVSRGPRATSERCVAVR
Sbjct: 327 GRVAAAVEGGVSRGPRATSERCVAVR 250
Score = 74.4 bits (156), Expect(3) = 4e-042
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -1 / -2
Query: 151 RVRLGAVVAKPQPAREGEREQRGEDHDREDGLARRHWIGAG 29
RVR V + QPAREGEREQRGEDH R+DGLARRHW+ AG
Sbjct: 198 RVRPHMPVHQAQPAREGEREQRGEDHGRQDGLARRHWVWAG 76
Score = 73.5 bits (154), Expect(3) = 5e-024
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +3 / +2
Query: 114 GCGLATTAPSRTRGRTATHRSEVARGPRLTPPSTAAAMRPAPW 242
G T + + RTATHRSEVARGPRLTPPSTAAA RPAPW
Sbjct: 209 GLATTTPGRTPSSSRTATHRSEVARGPRLTPPSTAAATRPAPW 337
Score = 50.1 bits (103), Expect(3) = 5e-024
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / +3
Query: 262 QPLQPGVRHQHGGAEHGA 315
QPLQPGVRHQHGGAEHGA
Sbjct: 357 QPLQPGVRHQHGGAEHGA 410
Score = 31.3 bits (62), Expect(2) = 4e-025
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 159 CGLGCGWARWWPSRSP 112
C GCG WWPS SP
Sbjct: 248 CCWGCGLGWWWPSPSP 201
Score = 27.2 bits (53), Expect(3) = 5e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 388 VSAGLRRGDGH 420
V AGLRRGDGH
Sbjct: 483 VPAGLRRGDGH 515
Score = 22.6 bits (43), Expect(2) = 3e-057
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +2
Query: 30 PAPIQWRLAK 59
PA QWRLAK
Sbjct: 77 PAQTQWRLAK 106
Score = 22.1 bits (42), Expect(3) = 4e-042
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -2 / -3
Query: 180 PPSGAWPCGLGCGW 139
P W CGLG W
Sbjct: 257 PCGCCWGCGLGWWW 216
>gb|CD230048.1|CD230048 SS1_40_H09.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H09_A012 5', mRNA sequence
Length = 548
Score = 140 bits (301), Expect(2) = 2e-056
Identities = 51/65 (78%), Positives = 57/65 (87%)
Frame = +2 / +2
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 350 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 529
Query: 560 RRVAC 574
RRV C
Sbjct: 530 RRVPC 544
Score = 100 bits (214), Expect(2) = 2e-056
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +2
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 161 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 340
Query: 362 DAAG 373
D G
Sbjct: 341 DNDG 352
Score = 92.3 bits (195), Expect(3) = 4e-029
Identities = 42/65 (64%), Positives = 44/65 (67%)
Frame = -2 / -3
Query: 573 HATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTTEPG 394
H TL * TGTMPA A+ GC MSK RGGLHQPPSS G LGGQKLVAVT PG
Sbjct: 543 HGTLL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 364
Query: 393 RHERP 379
RH+ P
Sbjct: 363 RHDCP 349
Score = 47.3 bits (97), Expect(3) = 4e-029
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 259 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 161
Score = 28.6 bits (56), Expect(3) = 4e-029
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -3
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 351 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 235
>gb|CW159464.1|CW159464 104_565_11149372_116_36410_006 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149372, DNA
sequence
Length = 679
Score = 108 bits (230), Expect(3) = 8e-056
Identities = 41/79 (51%), Positives = 56/79 (70%)
Frame = +2 / -2
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWC P R HFDMSQP ++ I + +AGI+PV Y++V C + GG+RF+I G YF LV +
Sbjct: 408 NGGWCGPGRPHFDMSQPAWEHIGVVQAGIIPVLYQQVRCTRTGGVRFSIAGSQYFLLVNI 229
Query: 638 TNVEGAGDVHAVAVKADRS 694
NV G+G V A VK D++
Sbjct: 228 QNVGGSGAVGAAWVKGDKT 172
Score = 84.5 bits (178), Expect(3) = 8e-056
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = +2 / -2
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPP 436
YGNLY+ GYG N AALS LFNNG SCG C+ + CD + GG+ C PGS + + P
Sbjct: 606 YGNLYNAGYGINNAALSQTLFNNGASCGQCYLITCDRSRSGGQWCKPGSSITVSATNLCP 427
Query: 437 NN 442
N
Sbjct: 426 PN 421
Score = 65.7 bits (137), Expect(3) = 8e-056
Identities = 26/52 (50%), Positives = 32/52 (61%)
Frame = +2 / -2
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTF 853
GW +SRNWG NWQ+ + L GQ LSF VTT+ G+ + P W FG TF
Sbjct: 171 GWIQMSRNWGANWQALSGLVGQGLSFAVTTTGGQYLQFMYVVPGWWQFGMTF 16
>gb|CN151326.1|CN151326 WOUND1_74_G01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_74_G01_A002 5', mRNA sequence
Length = 813
Score = 133 bits (285), Expect(2) = 1e-055
Identities = 48/62 (77%), Positives = 54/62 (87%)
Frame = +2 / +3
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
GRSCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM++P F IA YRAGIVPV++
Sbjct: 372 GRSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVAF 551
Query: 560 RR 565
RR
Sbjct: 552 RR 557
Score = 105 bits (225), Expect(2) = 1e-055
Identities = 41/66 (62%), Positives = 46/66 (69%)
Frame = +2 / +3
Query: 176 GGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEV 355
G G W SAHATFY YGNLYS GYGTNTAALSTALFN+G +CG+C+E+
Sbjct: 177 GYGGWQSAHATFYGGGDASGTMGGACGYGNLYSTGYGTNTAALSTALFNDGAACGSCYEL 356
Query: 356 RCDAAG 373
RCD AG
Sbjct: 357 RCDNAG 374
Score = 86.3 bits (182), Expect(3) = 1e-030
Identities = 39/58 (67%), Positives = 40/58 (68%)
Frame = -2 / -3
Query: 552 TGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTTEPGRHERP 379
TGTMPA AM G MSK RGGLHQPPSS G LGGQKLVAVT PGRH+RP
Sbjct: 544 TGTMPARYCAMWRKAGSAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPGRHDRP 371
Score = 48.7 bits (100), Expect(3) = 1e-030
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRATSER 170
P AV+VAVP R AH AGR+AAAVE GV P A + R
Sbjct: 281 PGAVQVAVPARAAHCAGRVAAAVERGVRALPPAVAAR 171
Score = 38.2 bits (77), Expect(3) = 1e-030
Identities = 18/39 (46%), Positives = 19/39 (48%)
Frame = -2 / -3
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
PA SHR+S Q P P VPYP L RLPY
Sbjct: 373 PALSHRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYRLPY 257
>gb|BE361754.1|BE361754 DG1_82_G01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 541
Score = 138 bits (296), Expect(2) = 1e-055
Identities = 50/65 (76%), Positives = 56/65 (86%)
Frame = +2 / +1
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G+SCLPG++ VTATNFCPPN LPSDDGGWCNPPR HFDM+QP F +IA YRAGIVPV+Y
Sbjct: 343 GQSCLPGTITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAQPAFLQIAQYRAGIVPVAY 522
Query: 560 RRVAC 574
R V C
Sbjct: 523 REVPC 537
Score = 100 bits (214), Expect(2) = 1e-055
Identities = 38/64 (59%), Positives = 44/64 (68%)
Frame = +2 / +1
Query: 182 GAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
G W SAHATFY YGN+YS GYGTNTAALSTALFN+G +CG+C+E+RC
Sbjct: 154 GGWQSAHATFYGGGDASGTMGGACGYGNMYSTGYGTNTAALSTALFNDGAACGSCYELRC 333
Query: 362 DAAG 373
D G
Sbjct: 334 DNDG 345
Score = 89.5 bits (189), Expect(3) = 3e-028
Identities = 41/65 (63%), Positives = 43/65 (66%)
Frame = -2 / -3
Query: 573 HATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQPPSSXGSALLGGQKLVAVTTTEPG 394
H T * TGTMPA A+ GC MSK RGGLHQPPSS G LGGQKLVAVT PG
Sbjct: 536 HGTSL*ATGTMPARYCAIWRKAGCAMSKCGRGGLHQPPSSLGRP*LGGQKLVAVTVMVPG 357
Query: 393 RHERP 379
RH+ P
Sbjct: 356 RHDCP 342
Score = 47.3 bits (97), Expect(3) = 3e-028
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRA 182
P AV V VPTR AH AGR+AAAVE GV P A
Sbjct: 252 PRAVHVPVPTRAAHCAGRVAAAVERGVGALPAA 154
Score = 28.6 bits (56), Expect(3) = 3e-028
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = -2 / -3
Query: 372 PAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
P+ S R+S Q P P VPYP L PY
Sbjct: 344 PSLSQRSS*QDPHAAPSLNSAVLSAAVFVPYPVLYMFPY 228
>gb|CL195140.1|CL195140 104_420_10942159_114_32302_028 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10942159, DNA
sequence
Length = 654
Score = 215 bits (464), Expect = 1e-054
Identities = 86/162 (53%), Positives = 108/162 (66%)
Frame = +2 / -2
Query: 380 GRSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSY 559
G + ++VVTATN CPPN +D GGWCNPPR HFD+S P F +IA +AGIVPVSY
Sbjct: 653 GAAAAAAALVVTATNLCPPNEQ*SADSGGWCNPPREHFDLSMPAFLQIAEEKAGIVPVSY 474
Query: 560 RRVACNKKGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKADRSPGWQALSRNWGQNWQ 739
RRVAC ++GGIR+ I G+ YFN+V VTNV GAGDV AV+VK + W L RNWG WQ
Sbjct: 473 RRVACARQGGIRYAIAGNKYFNMVTVTNVGGAGDVAAVSVKGSKRVKWTELKRNWGVVWQ 294
Query: 740 SNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQ 865
+ L ++L+FRV T D R S + P W FG T+ ++
Sbjct: 293 TGEDLTCESLTFRVMTGDHRKATSWHVLPEDWKFGVTYQASK 168
>gb|CN127175.1|CN127175 RHOH1_21_B02.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_B02_A002 5', mRNA sequence
Length = 816
Score = 110 bits (235), Expect(3) = 2e-054
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +2 / +3
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWC P R HFDMSQP ++ I +Y AG+VPV Y++V C++ GG+RF++ G YF LV +
Sbjct: 447 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 626
Query: 638 TNVEGAGDVHAVAVKADRS 694
N+ G+G V A VK D++
Sbjct: 627 QNLGGSGSVGAAWVKGDKT 683
Score = 88.1 bits (186), Expect(3) = 2e-054
Identities = 34/90 (37%), Positives = 44/90 (48%)
Frame = +2 / +3
Query: 173 LGGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFE 352
+ WS ATFY Y NLY+ GYG N AAL LFN+G SCG C+
Sbjct: 165 VAAAGWSQGTATFYGGVDASGTMGGACGYDNLYNAGYGVNNAALGPTLFNDGASCGQCYL 344
Query: 353 VRCDAAGGGGRSCLPGSVVVTATNFCPPNN 442
+ CD + GG+ C PG+ + P+N
Sbjct: 345 ITCDTSRSGGQWCKPGNSTTVSATNLCPSN 434
Score = 55.1 bits (114), Expect(3) = 2e-054
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2 / +3
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAP 826
GW +SRNWG NWQ+ L GQ LSF VTT+ G+ + N P
Sbjct: 684 GWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVP 812
>gb|BG817383.1|BG817383 EM1_75_B09.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 542
Score = 209 bits (451), Expect(2) = 2e-053
Identities = 85/119 (71%), Positives = 87/119 (73%)
Frame = +2 / +1
Query: 95 PFALSRGLRLGHHRAQPHPRPHGHAPLGGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYS 274
P A GL H R P +PHGHAPLGGGAWSSAHATFY YGNLYS
Sbjct: 184 PHAHGLGLGHHHPRPHPQQQPHGHAPLGGGAWSSAHATFYGGGDASGTMGGACGYGNLYS 363
Query: 275 QGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPPNNALP 451
QGYGTNTAALSTALFN+GLSCGACFEVRCDAAGGG SCLPGSVVVTATNFCPP P
Sbjct: 364 QGYGTNTAALSTALFNSGLSCGACFEVRCDAAGGGSHSCLPGSVVVTATNFCPPTTRSP 540
Score = 108 bits (231), Expect(3) = 5e-040
Identities = 46/65 (70%), Positives = 48/65 (73%)
Frame = -2 / -1
Query: 450 GSALLGGQKLVAVTTTEPGRHERPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL 271
G ++GGQKLVAVTTTEPGRHE PPPAAS RTSKQAPQLRP VPYPWL
Sbjct: 539 GERVVGGQKLVAVTTTEPGRHEWLPPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL 360
Query: 270 *RLPY 256
*RLPY
Sbjct: 359 *RLPY 345
Score = 105 bits (224), Expect(2) = 4e-025
Identities = 49/86 (56%), Positives = 50/86 (58%)
Frame = -1 / -3
Query: 412 HHDGXXXXXXXXXXXXXAPHLXXXXXXXXXXXXXXXXXXXXXXVPLAVEVAVPTRPAHGA 233
HHDG A HL VPLAVEVAVPTRPAHGA
Sbjct: 501 HHDGARQARVAPAARRVAAHLEAGAAAEAAVEERRAQRRRVGAVPLAVEVAVPTRPAHGA 322
Query: 232 GRIAAAVEGGVSRGPRATSERCVAVR 155
GR+AAAVEGGVSRGPRATSERCVAVR
Sbjct: 321 GRVAAAVEGGVSRGPRATSERCVAVR 244
Score = 74.4 bits (156), Expect(3) = 5e-040
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -1 / -3
Query: 151 RVRLGAVVAKPQPAREGEREQRGEDHDREDGLARRHWIGAG 29
RVR V + QPAREGEREQRGEDH R+DGLARRHW+ AG
Sbjct: 192 RVRPHMPVHQAQPAREGEREQRGEDHGRQDGLARRHWVWAG 70
Score = 73.5 bits (154), Expect(3) = 5e-024
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +3 / +2
Query: 114 GCGLATTAPSRTRGRTATHRSEVARGPRLTPPSTAAAMRPAPW 242
G T + + RTATHRSEVARGPRLTPPSTAAA RPAPW
Sbjct: 203 GLATTTPGRTPSSSRTATHRSEVARGPRLTPPSTAAATRPAPW 331
Score = 50.1 bits (103), Expect(3) = 5e-024
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / +3
Query: 262 QPLQPGVRHQHGGAEHGA 315
QPLQPGVRHQHGGAEHGA
Sbjct: 351 QPLQPGVRHQHGGAEHGA 404
Score = 31.3 bits (62), Expect(2) = 4e-025
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -1
Query: 159 CGLGCGWARWWPSRSP 112
C GCG WWPS SP
Sbjct: 242 CCWGCGLGWWWPSPSP 195
Score = 27.2 bits (53), Expect(3) = 5e-024
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +3
Query: 388 VSAGLRRGDGH 420
V AGLRRGDGH
Sbjct: 477 VPAGLRRGDGH 509
Score = 22.6 bits (43), Expect(2) = 2e-053
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +2
Query: 30 PAPIQWRLAK 59
PA QWRLAK
Sbjct: 71 PAQTQWRLAK 100
Score = 22.1 bits (42), Expect(3) = 5e-040
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = -2 / -1
Query: 180 PPSGAWPCGLGCGW 139
P W CGLG W
Sbjct: 251 PCGCCWGCGLGWWW 210
>gb|CW246309.1|CW246309 104_707_11221289_116_35084_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11221289, DNA
sequence
Length = 616
Score = 145 bits (311), Expect(3) = 2e-053
Identities = 56/98 (57%), Positives = 73/98 (74%)
Frame = +2 / +1
Query: 401 SVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNK 580
S+ VTATN CPPN A +++GGWCNPPR HFD+S+P F ++A +RAGIVPV YRRV C +
Sbjct: 199 SITVTATNLCPPNWAQDTNNGGWCNPPRTHFDLSKPAFMKMAQWRAGIVPVMYRRVPCVR 378
Query: 581 KGGIRFTINGHSYFNLVLVTNVEGAGDVHAVAVKADRS 694
+GG+RF + G+ Y+ L V NV GAGDV + VK+ S
Sbjct: 379 RGGLRFALQGNPYWLLAYVMNVGGAGDVVEMWVKSGTS 492
Score = 67.5 bits (141), Expect(3) = 2e-053
Identities = 23/35 (65%), Positives = 29/35 (82%)
Frame = +2 / +1
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRC 361
YGNLY+ GYGT+TAALST LF +G CG C+++RC
Sbjct: 61 YGNLYATGYGTDTAALSTTLFKDGHGCGTCYQIRC 165
Score = 37.7 bits (76), Expect(3) = 2e-053
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +2 / +1
Query: 692 SPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVL 808
S W ++ NWG +Q+ L G+ALSF+VT+ R +
Sbjct: 493 SCAWIRMTHNWGAAYQAFAQLGGKALSFKVTSYTTRQTI 609
>gb|BG322688.1|BG322688 EM1_13_B01.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 425
Score = 179 bits (386), Expect = 7e-044
Identities = 73/103 (70%), Positives = 75/103 (72%)
Frame = +2 / +2
Query: 95 PFALSRGLRLGHHRAQPHPRPHGHAPLGGGAWSSAHATFYXXXXXXXXXXXXXXYGNLYS 274
P A GL H R P +PHGHAPLGGGAWSSAHATFY YGNLYS
Sbjct: 116 PHAHGLGLGHHHPRPHPQQQPHGHAPLGGGAWSSAHATFYGGGDASGTMGGACGYGNLYS 295
Query: 275 QGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGS 403
QGYGTNTAALSTALFN+GLSCGACFEVRCDAAGGG SCLPGS
Sbjct: 296 QGYGTNTAALSTALFNSGLSCGACFEVRCDAAGGGSHSCLPGS 424
Score = 98.7 bits (209), Expect(3) = 2e-053
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = -1 / -2
Query: 280 PLAVEVAVPTRPAHGAGRIAAAVEGGVSRGPRATSERCVAVR 155
PLAVEVAVPTRPAHGAGR+AAAVEGGVSRGPRATSERCVAVR
Sbjct: 301 PLAVEVAVPTRPAHGAGRVAAAVEGGVSRGPRATSERCVAVR 176
Score = 81.3 bits (171), Expect(3) = 2e-053
Identities = 34/49 (69%), Positives = 34/49 (69%)
Frame = -2 / -3
Query: 402 EPGRHERPPPPAASHRTSKQAPQLRPXXXXXXXXXXXXVPYPWL*RLPY 256
EPGRHE PPPAAS RTSKQAPQLRP VPYPWL*RLPY
Sbjct: 423 EPGRHEWLPPPAASQRTSKQAPQLRPLLKSAVLSAAVLVPYPWL*RLPY 277
Score = 73.5 bits (154), Expect(2) = 4e-021
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +3 / +3
Query: 114 GCGLATTAPSRTRGRTATHRSEVARGPRLTPPSTAAAMRPAPW 242
G T + + RTATHRSEVARGPRLTPPSTAAA RPAPW
Sbjct: 135 GLATTTPGRTPSSSRTATHRSEVARGPRLTPPSTAAATRPAPW 263
Score = 70.7 bits (148), Expect(3) = 2e-053
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = -1 / -2
Query: 151 RVRLGAVVAKPQPAREGEREQRGEDHDREDGLARRHWI 38
RVR V + QPAREGEREQRGEDH R+DGLARRHW+
Sbjct: 124 RVRPHMPVHQAQPAREGEREQRGEDHGRQDGLARRHWV 11
Score = 50.1 bits (103), Expect(2) = 4e-021
Identities = 18/18 (100%), Positives = 18/18 (100%)
Frame = +1 / +1
Query: 262 QPLQPGVRHQHGGAEHGA 315
QPLQPGVRHQHGGAEHGA
Sbjct: 283 QPLQPGVRHQHGGAEHGA 336
>gb|CW210014.1|CW210014 104_640_11189567_148_36998_092 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11189567, DNA
sequence
Length = 675
Score = 104 bits (221), Expect(3) = 8e-053
Identities = 39/75 (52%), Positives = 54/75 (72%)
Frame = +2 / -3
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWC P R HFDMSQP +++I + + GI+PV Y++V C++ GG+RF I G SYF LV +
Sbjct: 490 NGGWCGPGRPHFDMSQPSWEKIGVVQGGIIPVLYQQVKCSRSGGVRFNIAGSSYFLLVNI 311
Query: 638 TNVEGAGDVHAVAVK 682
N+ G+G V A VK
Sbjct: 310 QNLGGSGSVGAAWVK 266
Score = 78.0 bits (164), Expect(3) = 8e-053
Identities = 31/56 (55%), Positives = 38/56 (67%)
Frame = +2 / -3
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFSGAQ 865
GW +SRNWG NWQ+ + L GQALSF VTT+ G+ + N AP W FGQT+S Q
Sbjct: 253 GWIQMSRNWGANWQALSGLTGQALSFAVTTTGGQYIQFLNVAPTWWQFGQTYSTNQ 86
Score = 66.1 bits (138), Expect(3) = 8e-053
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +2 / -3
Query: 272 SQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPPNN 442
S GYG AALS LFN+G SCG C+ + CD + G + C PG+ V P N
Sbjct: 673 SAGYGVTNAALSQTLFNDGASCGQCYTITCDGSRSGSQYCKPGNTVTVTATNLCPPN 503
>gb|CW348698.1|CW348698 fsbb001f009c21k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f009c21, DNA
sequence
Length = 689
Score = 115 bits (245), Expect(5) = 4e-052
Identities = 42/76 (55%), Positives = 57/76 (75%)
Frame = +2 / +2
Query: 461 GGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLVT 640
GGWC PPR HFDMSQP ++ I +Y AG++ V Y+RV C K GG+RFTI G + F +VL+T
Sbjct: 296 GGWCAPPRPHFDMSQPAWENIGIYSAGVINVLYQRVKCWKSGGVRFTIAGFNGFYMVLIT 475
Query: 641 NVEGAGDVHAVAVKAD 688
NV G+G + ++AVK +
Sbjct: 476 NVAGSGSIQSMAVKGN 523
Score = 67.0 bits (140), Expect(5) = 4e-052
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAA 370
Y +LY QGYG N AALSTALFN+G SCG C+ + CD++
Sbjct: 80 YSDLYEQGYGINNAALSTALFNDGASCGQCYVIICDSS 193
Score = 37.7 bits (76), Expect(5) = 4e-052
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2 / +2
Query: 752 LDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTF 853
L GQ LSF + ++ G++++ + P W FGQT+
Sbjct: 587 LVGQGLSFALVSTGGQNLVFKDVVPAWWQFGQTY 688
Score = 34.5 bits (69), Expect(5) = 4e-052
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +2 / +2
Query: 404 VVVTATNFCPPNNALPS 454
VVV+ATNFCPPN LP+
Sbjct: 227 VVVSATNFCPPNWDLPA 277
Score = 27.2 bits (53), Expect(5) = 4e-052
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +2 / +2
Query: 692 SPGWQALSRNWGQNW 736
S W + RNWG NW
Sbjct: 524 STDWIPMYRNWGANW 568
>gb|CW126001.1|CW126001 104_506_11112648_148_34725_088 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11112648, DNA
sequence
Length = 611
Score = 135 bits (289), Expect(3) = 7e-052
Identities = 47/80 (58%), Positives = 64/80 (80%)
Frame = +2 / -1
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
DGGWCN RAHFDM+QP +++I ++ GI+PV YRRV+C +KGG+RFT+NGH YFNLVL+
Sbjct: 530 DGGWCNAVRAHFDMAQPAWEKIGVFSGGIIPVIYRRVSCVRKGGVRFTVNGHDYFNLVLL 351
Query: 638 TNVEGAGDVHAVAVKADRSP 697
TNV G G + A+ V++ + P
Sbjct: 350 TNVAGPGSIRAMDVRSSKPP 291
Score = 86.3 bits (182), Expect(3) = 7e-024
Identities = 38/62 (61%), Positives = 42/62 (67%)
Frame = -2 / +1
Query: 642 LVTSTRLK*EWPLMVKRMPPFLLHATLR*ETGTMPAL*SAMRWNTGCDMSKWARGGLHQP 463
LV+ TRLK* WPL VKR PPFL TL * TG MP L + + + GC MSKWAR LH P
Sbjct: 346 LVSRTRLK*SWPLTVKRTPPFLTQETLL*MTGMMPPLKTPIFSHAGCAMSKWARTALHHP 525
Query: 462 PS 457
PS
Sbjct: 526 PS 531
Score = 73.5 bits (154), Expect(3) = 7e-052
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +2 / -1
Query: 701 WQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAPRGWSFGQTFS 856
W ++RNWG NW S L GQ LSFRVT +DG++++ + P W FGQ+FS
Sbjct: 284 WMHMARNWGANWHSLRYLTGQGLSFRVTVTDGQTIVFADVVPPKWRFGQSFS 129
Score = 36.3 bits (73), Expect(3) = 7e-052
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = +2 / -1
Query: 401 SVVVTATNFCPPNNALP 451
SV VTATNFCPPN LP
Sbjct: 581 SVTVTATNFCPPNWKLP 531
Score = 33.6 bits (67), Expect(3) = 7e-024
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2 / +1
Query: 852 KVWPKDQPRGAALLESTERPSLVVTRKDRACPSRSVLLCQFWPQLR 715
K WP G ++ PS+ VT D P R + CQ PQLR
Sbjct: 133 KDWPNLHLGGTTSAKTMVWPSVTVTLNDSPWPVRYLRECQLAPQLR 270
Score = 30.4 bits (60), Expect(3) = 7e-024
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / +1
Query: 450 GSALLGGQKLVAVTTTE 400
GS LGGQKLVAVT T+
Sbjct: 532 GSFQLGGQKLVAVTVTD 582
>gb|CN139792.1|CN139792 OX1_24_D09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_D09_A002 3', mRNA sequence
Length = 664
Score = 204 bits (439), Expect(2) = 1e-051
Identities = 72/133 (54%), Positives = 96/133 (72%)
Frame = +2 / +1
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWCN R HFDM+QP F++I +Y GI+PV Y+RV C K+GG+RF++NGH YFNLVLV
Sbjct: 25 EGGWCNQHRPHFDMAQPAFEKIGVYSGGIIPVMYKRVPCVKRGGVRFSVNGHDYFNLVLV 204
Query: 638 TNVEGAGDVHAVAVKADRSPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNN 817
TNV AG + ++ VK S W ++RNWG NW S L GQ LSFR+T +DG+++ +
Sbjct: 205 TNVAAAGSIKSMEVKTSNSSNWSPMARNWGANWHSLAYLTGQMLSFRLTDTDGQTIEFTD 384
Query: 818 AAPRGWSFGQTFS 856
P+GW FGQTF+
Sbjct: 385 VVPQGWKFGQTFA 423
Score = 22.1 bits (42), Expect(2) = 1e-051
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / +1
Query: 428 CPPNNALP 451
CPPN ALP
Sbjct: 1 CPPNMALP 24
>gb|CW409489.1|CW409489 fsbb001f103n01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f103n01, DNA
sequence
Length = 667
Score = 110 bits (235), Expect(3) = 2e-051
Identities = 40/79 (50%), Positives = 57/79 (72%)
Frame = +2 / -1
Query: 458 DGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVLV 637
+GGWC P R HFDMSQP ++ I +Y AG+VPV Y++V C++ GG+RF++ G YF LV +
Sbjct: 367 NGGWCGPGRPHFDMSQPAWEHIGIYSAGVVPVLYQQVKCSRTGGVRFSLAGSQYFLLVNI 188
Query: 638 TNVEGAGDVHAVAVKADRS 694
N+ G+G V A VK D++
Sbjct: 187 QNLGGSGSVGAAWVKGDKT 131
Score = 78.0 bits (164), Expect(3) = 2e-051
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +2 / -1
Query: 257 YGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCDAAGGGGRSCLPGSVVVTATNFCPP 436
Y NLY+ GYG N AAL LFN+G SCG C+ + CD + GG+ C PG+ + + P
Sbjct: 565 YDNLYNAGYGVNNAALGPTLFNDGASCGQCYLITCDTSRSGGQWCKPGNSITVSATNLCP 386
Query: 437 NN 442
+N
Sbjct: 385 SN 380
Score = 55.1 bits (114), Expect(3) = 2e-051
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +2 / -1
Query: 698 GWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSNNAAP 826
GW +SRNWG NWQ+ L GQ LSF VTT+ G+ + N P
Sbjct: 130 GWIQMSRNWGANWQALAGLVGQGLSFAVTTTGGQYIQFWNVVP 2
>gb|BG049384.1|BG049384 OV1_19_C06.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 204 bits (439), Expect = 3e-051
Identities = 74/136 (54%), Positives = 97/136 (71%)
Frame = +2 / +3
Query: 455 DDGGWCNPPRAHFDMSQPVFQRIALYRAGIVPVSYRRVACNKKGGIRFTINGHSYFNLVL 634
D GWCN PR HFDMSQP ++ I +Y+AG++PV+YRRV+C + GGIRF I+GH YF+LV
Sbjct: 27 DANGWCNSPRRHFDMSQPAWETIGVYQAGVIPVNYRRVSCQRSGGIRFAISGHDYFDLVT 206
Query: 635 VTNVEGAGDVHAVAVKADRSPGWQALSRNWGQNWQSNTLLDGQALSFRVTTSDGRSVLSN 814
+TNV GAG V A + W A+SRNWG+NWQS L G+ALSF+V T DG+ V+++
Sbjct: 207 ITNVGGAGAVAAAWIMGTGGTDWLAMSRNWGENWQSGAYLTGKALSFKVQTDDGKVVVAD 386
Query: 815 NAAPRGWSFGQTFSGA 862
N AP W FG T+ +
Sbjct: 387 NVAPANWQFGSTYQAS 434
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,465,540,215
Number of Sequences: 832831
Number of extensions: 23491758
Number of successful extensions: 267770
Number of sequences better than 1.0e-020: 203
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 43813359480
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)