TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2493751.2.1
(577 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW311858.1|CW311858 104_801_11470450_116_36284_039 Sorgh... 331 6e-090
gb|CN137277.1|CN137277 OX1_56_F11.b1_A002 Oxidatively-stres... 110 2e-034
gb|CW027959.1|CW027959 104_254_10498810_114_30395 Sorghum m... 107 1e-033
gb|CN127130.1|CN127130 RHOH1_21_E10.b1_A002 Acid- and alkal... 107 1e-033
gb|CN134410.1|CN134410 OX1_26_E06.b1_A002 Oxidatively-stres... 107 1e-033
gb|CN136123.1|CN136123 OX1_41_A01.b1_A002 Oxidatively-stres... 107 1e-033
gb|CN134260.1|CN134260 OX1_25_F09.b1_A002 Oxidatively-stres... 107 1e-033
gb|CX607223.1|CX607223 ANR1_7_H06.b1_A002 Anaerobic roots S... 107 1e-033
gb|CL187298.1|CL187298 104_402_10900783_116_32436_020 Sorgh... 107 1e-033
gb|BE596007.1|BE596007 PI1_51_B06.g1_A002 Pathogen induced ... 107 1e-033
gb|CN139605.1|CN139605 OX1_23_B11.b1_A002 Oxidatively-stres... 104 1e-032
gb|BE597348.1|BE597348 PI1_72_D04.g1_A002 Pathogen induced ... 101 9e-032
gb|BE366534.1|BE366534 PI1_34_G11.g1_A002 Pathogen induced ... 100 2e-031
gb|BE597298.1|BE597298 PI1_71_G08.g1_A002 Pathogen induced ... 100 2e-031
gb|CN133283.1|CN133283 OX1_11_F09.b1_A002 Oxidatively-stres... 99 6e-031
gb|CD428331.1|CD428331 ETH1_31_G04.b1_A002 Ethylene-treated... 98 8e-031
gb|CD428329.1|CD428329 ETH1_31_D12.b1_A002 Ethylene-treated... 98 8e-031
gb|CD462515.1|CD462515 ETH1_38_G08.b1_A002 Ethylene-treated... 98 8e-031
gb|CD204005.1|CD204005 HS1_3_D12.b1_A012 Heat-shocked seedl... 98 8e-031
gb|CD428496.1|CD428496 ETH1_27_F04.b1_A002 Ethylene-treated... 98 8e-031
gb|BM318086.1|BM318086 PI1_78_D02.g9_A002 Pathogen induced ... 98 8e-031
gb|BE596960.1|BE596960 PI1_60_F04.g1_A002 Pathogen induced ... 98 8e-031
gb|CW027960.1|CW027960 104_254_10498810_116_30396 Sorghum m... 97 1e-030
gb|CF433630.1|CF433630 NIT1_28_E09.b1_A002 Nitrogen-deficie... 97 1e-030
gb|BE364252.1|BE364252 PI1_12_F11.g1_A002 Pathogen induced ... 97 1e-030
gb|BM318076.1|BM318076 PI1_78_C02.g9_A002 Pathogen induced ... 97 1e-030
gb|BM330896.1|BM330896 PIC1_57_H12.g1_A002 Pathogen-infecte... 97 1e-030
gb|BE600243.1|BE600243 PI1_94_A12.g1_A002 Pathogen induced ... 97 1e-030
gb|CN133263.1|CN133263 OX1_11_D08.b1_A002 Oxidatively-stres... 98 2e-030
gb|CX621973.1|CX621973 GABR1_61_F10.b2_A002 GA- or brassino... 96 3e-030
gb|CW178431.1|CW178431 104_592_11159555_148_36598_046 Sorgh... 95 5e-030
gb|BM318399.1|BM318399 PI1_13_B07.b9_A002 Pathogen induced ... 95 5e-030
gb|CN145947.1|CN145947 WOUND1_36_H12.b1_A002 Wounded leaves... 105 1e-029
gb|BF656429.1|BF656429 FM1_45_G05.g2_A003 Floral-Induced Me... 130 1e-029
gb|CD432323.1|CD432323 ETH1_29_D04.b1_A002 Ethylene-treated... 93 3e-029
gb|CW145878.1|CW145878 104_538_11138696_116_34977_022 Sorgh... 75 3e-028
gb|CW120724.1|CW120724 104_498_11109495_148_34655_060 Sorgh... 83 3e-028
gb|BE598553.1|BE598553 PI1_83_B06.g1_A002 Pathogen induced ... 85 5e-028
gb|CD431808.1|CD431808 ETH1_11_D08.b1_A002 Ethylene-treated... 91 8e-028
gb|CW226549.1|CW226549 104_664_11204946_116_37218_069 Sorgh... 81 9e-028
gb|CW255336.1|CW255336 104_719_11226181_116_35124_049 Sorgh... 87 2e-027
gb|CW426368.1|CW426368 fsbb001f137l13k0 Sorghum methylation... 87 2e-027
gb|CD464059.1|CD464059 ETH1_48_C06.b1_A002 Ethylene-treated... 85 7e-027
gb|CD233429.1|CD233429 SS1_2_H09.b1_A012 Salt-stressed seed... 85 7e-027
gb|AW563729.1|AW563729 LG1_248_D09.g1_A002 Light Grown 1 (L... 85 7e-027
gb|CD233608.1|CD233608 SS1_3_C05.b1_A012 Salt-stressed seed... 85 7e-027
gb|CD231679.1|CD231679 SS1_23_G10.b1_A012 Salt-stressed see... 85 7e-027
gb|BM318769.1|BM318769 PI1_16_B11.g1_A002 Pathogen induced ... 85 7e-027
gb|CW150687.1|CW150687 104_551_11143546_148_36309_043 Sorgh... 77 1e-026
gb|CX616613.1|CX616613 GABR1_29_A01.b1_A002 GA- or brassino... 83 2e-026
gb|CW271590.1|CW271590 104_743_11403078_148_35343_017 Sorgh... 75 5e-026
gb|CN137154.1|CN137154 OX1_55_B07.g1_A002 Oxidatively-stres... 81 1e-025
gb|CN132072.1|CN132072 OX1_4_A01.b1_A002 Oxidatively-stress... 81 1e-025
gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence 92 1e-025
gb|CW155462.1|CW155462 104_558_11146153_148_36368_015 Sorgh... 92 2e-025
gb|CW155461.1|CW155461 104_558_11146153_116_36367_015 Sorgh... 92 2e-025
gb|CW129934.1|CW129934 104_512_11114837_116_34768_027 Sorgh... 92 2e-025
gb|CW481610.1|CW481610 fsbb001f241e17k0 Sorghum methylation... 69 2e-025
gb|CN137071.1|CN137071 OX1_55_B07.b1_A002 Oxidatively-stres... 79 4e-025
gb|CW173535.1|CW173535 104_585_11156899_148_36550_076 Sorgh... 75 4e-025
gb|CW295207.1|CW295207 104_776_11460808_148_35615_058 Sorgh... 76 6e-025
gb|CW224324.1|CW224324 104_660_11203386_116_37447_071 Sorgh... 80 8e-025
gb|CF073428.1|CF073428 FE1_10_D03.b1_A002 Iron-deficient se... 71 1e-024
gb|CW170337.1|CW170337 104_580_11155154_148_36511_003 Sorgh... 113 2e-024
gb|CW027519.1|CW027519 104_254_10498564_116_30396 Sorghum m... 68 4e-024
gb|CW323755.1|CW323755 104_818_11476798_148_35909_095 Sorgh... 68 4e-024
gb|CW280422.1|CW280422 104_755_11407611_148_35447_006 Sorgh... 68 4e-024
gb|CX614858.1|CX614858 GABR1_16_F08.g1_A002 GA- or brassino... 78 5e-024
gb|CL183683.1|CL183683 104_396_10898332_114_31923_172 Sorgh... 74 7e-024
gb|CW337182.1|CW337182 104_836_11484010_116_36111_033 Sorgh... 76 6e-023
gb|CW452168.1|CW452168 fsbb001f192j06k0 Sorghum methylation... 80 6e-023
gb|CN141482.1|CN141482 OX1_52_A04.b1_A002 Oxidatively-stres... 108 8e-023
gb|CW461042.1|CW461042 fsbb001f208i12f0 Sorghum methylation... 80 8e-023
gb|BM322654.1|BM322654 PIC1_7_E01.b1_A002 Pathogen-infected... 107 1e-022
gb|BM325512.1|BM325512 PIC1_45_E01.b1_A002 Pathogen-infecte... 107 1e-022
gb|BM329244.1|BM329244 PIC1_35_A11.g1_A002 Pathogen-infecte... 71 1e-022
gb|CW372287.1|CW372287 fsbb001f048c04k0 Sorghum methylation... 76 2e-022
gb|CW440164.1|CW440164 fsbb001f158k20k0 Sorghum methylation... 88 3e-022
gb|CW260508.1|CW260508 104_727_11229003_148_35201_012 Sorgh... 67 3e-022
gb|BM326629.1|BM326629 PIC1_59_F12.b1_A002 Pathogen-infecte... 85 3e-022
gb|CW043614.1|CW043614 104_279_10508474_114_30276 Sorghum m... 85 3e-022
gb|CW126560.1|CW126560 104_507_11112963_116_34732_010 Sorgh... 71 4e-022
gb|CW233907.1|CW233907 104_687_11213696_116_37384_026 Sorgh... 83 1e-021
gb|CB926782.1|CB926782 ABA1_10_B02.b1_A012 Abscisic acid-tr... 83 1e-021
gb|CX617701.1|CX617701 GABR1_35_F08.b1_A002 GA- or brassino... 83 1e-021
gb|CD212285.1|CD212285 HS1_71_B05.g1_A012 Heat-shocked seed... 83 1e-021
gb|CW170163.1|CW170163 104_580_11155061_116_36509_023 Sorgh... 79 2e-021
gb|CW187387.1|CW187387 104_605_11167065_148_36714_035 Sorgh... 73 3e-021
gb|CW060406.1|CW060406 104_303_10519835_1_30042 Sorghum met... 79 3e-021
gb|CN140129.1|CN140129 OX1_34_F04.b1_A002 Oxidatively-stres... 67 3e-021
gb|CW280421.1|CW280421 104_755_11407611_116_35443_006 Sorgh... 68 4e-021
gb|BM323867.1|BM323867 PIC1_28_E11.b1_A002 Pathogen-infecte... 102 5e-021
gb|AF466201.1| Sorghum bicolor clone SBTXS_0032H17 putative... 92 6e-021
gb|CD205301.1|CD205301 HS1_13_F10.b1_A012 Heat-shocked seed... 81 7e-021
gb|CL158546.1|CL158546 104_347_10803613_114_31377_205 Sorgh... 101 7e-021
gb|CW266100.1|CW266100 104_735_11232246_116_35270_019 Sorgh... 101 7e-021
gb|CW266101.1|CW266101 104_735_11232246_148_35266_019 Sorgh... 101 7e-021
gb|CW357455.1|CW357455 fsbb001f024b23f0 Sorghum methylation... 101 7e-021
gb|BE362491.1|BE362491 DG1_87_C04.b1_A002 Dark Grown 1 (DG1... 101 7e-021
gb|BE592953.1|BE592953 WS1_92_E01.b1_A002 Water-stressed 1 ... 101 7e-021
gb|BE599911.1|BE599911 PI1_77_B10.b1_A002 Pathogen induced ... 101 7e-021
gb|BE638238.1|BE638238 PI1_32_F03.b2_A002 Pathogen induced ... 101 7e-021
gb|BM322422.1|BM322422 PIC1_4_F03.b1_A002 Pathogen-infected... 101 7e-021
>gb|CW311858.1|CW311858 104_801_11470450_116_36284_039 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470450, DNA
sequence
Length = 672
Score = 331 bits (717), Expect = 6e-090
Identities = 140/153 (91%), Positives = 141/153 (92%)
Frame = +2 / -3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YPFIS+VNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFG V A
Sbjct: 502 YPFISYVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGAVPVA 323
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGP 367
VTETGWPTAGHPAATPQNA AYNAKIVER RGVGTPKRP VEVFLFDLYDEDGKPGP
Sbjct: 322 VTETGWPTAGHPAATPQNAAAYNAKIVERAVRGVGTPKRPGVPVEVFLFDLYDEDGKPGP 143
Query: 368 EFERHFGIFRADGSKAYDINFA*SW*FLERWTA 466
EFERHFGIFRADG KAYDINFA*S *FLE WTA
Sbjct: 142 EFERHFGIFRADGGKAYDINFA*SS*FLE*WTA 44
Score = 264 bits (570), Expect(2) = 2e-070
Identities = 115/153 (75%), Positives = 118/153 (77%)
Frame = -2 / +3
Query: 465 AVHRSRNYQL*AKLMSYALLPSALKMPKWRSNSGPGLPSSSYKSNRNTSTVSFGRFGVPT 286
AVH SRNY+L*AKLMSYAL PSALKMPKWRSNSGPGLPSSSY+SNRNTST + GR GVPT
Sbjct: 45 AVHHSRNYEL*AKLMSYALPPSALKMPKWRSNSGPGLPSSSYRSNRNTSTGTPGRLGVPT 224
Query: 285 PRAGLSTILALYAVAFCGVAAGCPAVGHPVSVXXXXXXXXXXXXXXXXXXXXXXXNRFVY 106
PR LSTILALYA AFCGVAAGCPAVGHPVSV NR VY
Sbjct: 225 PRTALSTILALYAAAFCGVAAGCPAVGHPVSVTATGTAPNPSFSSAATSASTVASNRLVY 404
Query: 105 TSAPSCTGAAPAPKSAYASCTFAGSFTWLMKG* 7
TSAPSCTGAAPAPKSAYASCT AGS T LMKG*
Sbjct: 405 TSAPSCTGAAPAPKSAYASCTLAGSLT*LMKG* 503
Score = 66.6 bits (139), Expect(4) = 2e-026
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = -1 / +2
Query: 190 HREQHAAEPLLLQRGHQRVYRGVEQVRVHQRAVLH 86
H ++H EPL LQRGHQRV+ GVEQV VHQRAVLH
Sbjct: 320 HGDRHGTEPLFLQRGHQRVHGGVEQVGVHQRAVLH 424
Score = 54.2 bits (112), Expect(4) = 2e-026
Identities = 25/28 (89%), Positives = 25/28 (89%)
Frame = -1 / +2
Query: 466 SRPSLQKLPALGKVDVIRLTAVRPEDAK 383
SRPSLQKL ALGKVDVIRL AVR EDAK
Sbjct: 44 SRPSLQKL*ALGKVDVIRLAAVRSEDAK 127
Score = 31.8 bits (63), Expect(4) = 2e-026
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 266 QSWRCTLWRSAGWRPG 219
+SWRCT RSAG RPG
Sbjct: 244 RSWRCTPRRSAGSRPG 291
Score = 23.1 bits (44), Expect(2) = 2e-070
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -3 / +1
Query: 506 FFLQHTPVDPLIN 468
F QH VDPLIN
Sbjct: 1 FNTQHIAVDPLIN 39
Score = 22.1 bits (42), Expect(4) = 2e-026
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +3
Query: 498 SAYTS*STNQQ 466
SAY+S*STNQ+
Sbjct: 9 SAYSS*STNQR 41
>gb|CN137277.1|CN137277 OX1_56_F11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_56_F11_A002 3', mRNA sequence
Length = 720
Score = 110 bits (234), Expect(2) = 2e-034
Identities = 45/95 (47%), Positives = 60/95 (63%)
Frame = +2 / +3
Query: 2 RAYPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVL 181
+ YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD LV+ALE G G V
Sbjct: 75 KVYPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDAFVDTLVSALENAGAGNVG 254
Query: 182 FAVTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 255 VVVSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 359
Score = 56.5 bits (117), Expect(2) = 2e-034
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 381 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 500
>gb|CW027959.1|CW027959 104_254_10498810_114_30395 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498810, DNA
sequence
Length = 891
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 357 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 536
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 537 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 635
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 657 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 776
>gb|CN127130.1|CN127130 RHOH1_21_E10.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_E10_A002 3', mRNA sequence
Length = 798
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / +1
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 148 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 327
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 328 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 426
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 448 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 567
>gb|CN134410.1|CN134410 OX1_26_E06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_E06_A002 3', mRNA sequence
Length = 796
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / +2
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 158 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 337
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 338 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 436
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 458 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 577
>gb|CN136123.1|CN136123 OX1_41_A01.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_41_A01_A002 3', mRNA sequence
Length = 796
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / +2
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 158 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 337
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 338 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 436
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 458 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 577
>gb|CN134260.1|CN134260 OX1_25_F09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_25_F09_A002 3', mRNA sequence
Length = 706
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 63 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 242
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 243 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 341
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 363 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 482
>gb|CX607223.1|CX607223 ANR1_7_H06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_7_H06_A002 3', mRNA sequence
Length = 696
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 60 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 239
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 240 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 338
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 360 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 479
>gb|CL187298.1|CL187298 104_402_10900783_116_32436_020 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10900783, DNA
sequence
Length = 678
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / -3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 526 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 347
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 346 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 248
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / -3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 226 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 107
>gb|BE596007.1|BE596007 PI1_51_B06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 600
Score = 107 bits (229), Expect(2) = 1e-033
Identities = 44/93 (47%), Positives = 58/93 (62%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V
Sbjct: 6 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVV 185
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 186 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 284
Score = 56.5 bits (117), Expect(2) = 1e-033
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 306 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 425
>gb|CN139605.1|CN139605 OX1_23_B11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_23_B11_A002 3', mRNA sequence
Length = 647
Score = 104 bits (221), Expect(2) = 1e-032
Identities = 43/93 (46%), Positives = 56/93 (60%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ A + L+YALF + VQDG+ Y NL DA VD V+ALE G G V
Sbjct: 9 YPYFSYTGKEAQIALSYALFTSPGTVVQDGSNAYQNLLDALVDTFVSALENAGAGNVGVV 188
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 189 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 287
Score = 56.5 bits (117), Expect(2) = 1e-032
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 309 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 428
>gb|BE597348.1|BE597348 PI1_72_D04.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 596
Score = 101 bits (215), Expect(2) = 9e-032
Identities = 42/91 (46%), Positives = 56/91 (61%)
Frame = +2 / +1
Query: 14 FISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVT 193
+ S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+
Sbjct: 1 YFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVS 180
Query: 194 ETGWPTAGHPAATPQNATAYNAKIVERPARG 286
E+GWP+AG AATP NA YN ++ +G
Sbjct: 181 ESGWPSAGGDAATPGNAQTYNQNLINHVGKG 273
Score = 56.5 bits (117), Expect(2) = 9e-032
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 295 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 414
>gb|BE366534.1|BE366534 PI1_34_G11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 622
Score = 100 bits (212), Expect(2) = 2e-031
Identities = 42/89 (47%), Positives = 55/89 (61%)
Frame = +2 / +3
Query: 20 SHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTET 199
S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+
Sbjct: 6 SYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSES 185
Query: 200 GWPTAGHPAATPQNATAYNAKIVERPARG 286
GWP+AG AATP NA YN ++ +G
Sbjct: 186 GWPSAGGDAATPGNAQTYNQNLINHVGKG 272
Score = 56.5 bits (117), Expect(2) = 2e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 294 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 413
>gb|BE597298.1|BE597298 PI1_71_G08.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 591
Score = 100 bits (212), Expect(2) = 2e-031
Identities = 42/89 (47%), Positives = 55/89 (61%)
Frame = +2 / +2
Query: 20 SHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTET 199
S+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+
Sbjct: 5 SYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSES 184
Query: 200 GWPTAGHPAATPQNATAYNAKIVERPARG 286
GWP+AG AATP NA YN ++ +G
Sbjct: 185 GWPSAGGDAATPGNAQTYNQNLINHVGKG 271
Score = 56.5 bits (117), Expect(2) = 2e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 293 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 412
>gb|CN133283.1|CN133283 OX1_11_F09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_11_F09_A002 3', mRNA sequence
Length = 628
Score = 98.7 bits (209), Expect(2) = 6e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGSDAATPGNAQTYNQNLINHVGKG 264
Score = 56.5 bits (117), Expect(2) = 6e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 286 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 405
>gb|CD428331.1|CD428331 ETH1_31_G04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_31_G04_A002 3', mRNA sequence
Length = 629
Score = 98.2 bits (208), Expect(2) = 8e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGGDAATPGNAQTYNQNLINHVGKG 264
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 286 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 405
>gb|CD428329.1|CD428329 ETH1_31_D12.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_31_D12_A002 3', mRNA sequence
Length = 628
Score = 98.2 bits (208), Expect(2) = 8e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGGDAATPGNAQTYNQNLINHVGKG 264
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 286 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 405
>gb|CD462515.1|CD462515 ETH1_38_G08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_G08_A002 3', mRNA sequence
Length = 624
Score = 98.2 bits (208), Expect(2) = 8e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +3
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 3 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 182
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 183 WPSAGGDAATPGNAQTYNQNLINHVGKG 266
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 288 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 407
>gb|CD204005.1|CD204005 HS1_3_D12.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_3_D12_A012 3', mRNA sequence
Length = 619
Score = 98.2 bits (208), Expect(2) = 8e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGGDAATPGNAQTYNQNLINHVGKG 264
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 286 IETYIFAMFNEDKKTGAEAERHFGLFNPDKSPAYSINFS* 405
>gb|CD428496.1|CD428496 ETH1_27_F04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_27_F04_A002 3', mRNA sequence
Length = 611
Score = 98.2 bits (208), Expect(2) = 8e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGGDAATPGNAQTYNQNLINHVGKG 264
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 286 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 405
>gb|BM318086.1|BM318086 PI1_78_D02.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 587
Score = 98.2 bits (208), Expect(2) = 8e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGGDAATPGNAQTYNQNLINHVGKG 264
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 286 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 405
>gb|BE596960.1|BE596960 PI1_60_F04.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 585
Score = 98.2 bits (208), Expect(2) = 8e-031
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGGDAATPGNAQTYNQNLINHVGKG 264
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 286 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 405
>gb|CW027960.1|CW027960 104_254_10498810_116_30396 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498810, DNA
sequence
Length = 748
Score = 97.3 bits (206), Expect(2) = 1e-030
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2 / -3
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 734 AQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 555
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 554 GDAATPGNAQTYNQNLINHVGKG 486
Score = 56.5 bits (117), Expect(2) = 1e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / -3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 464 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 345
>gb|CF433630.1|CF433630 NIT1_28_E09.b1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_28_E09_A002 3', mRNA sequence
Length = 629
Score = 97.3 bits (206), Expect(2) = 1e-030
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2 / +3
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 15 AQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 194
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 195 GDAATPGNAQTYNQNLINHVGKG 263
Score = 56.5 bits (117), Expect(2) = 1e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 285 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 404
>gb|BE364252.1|BE364252 PI1_12_F11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 625
Score = 97.3 bits (206), Expect(2) = 1e-030
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2 / +1
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 13 AQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 192
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 193 GDAATPGNAQTYNQNLINHVGKG 261
Score = 56.5 bits (117), Expect(2) = 1e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 283 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 402
>gb|BM318076.1|BM318076 PI1_78_C02.g9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 600
Score = 97.3 bits (206), Expect(2) = 1e-030
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2 / +2
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 8 AQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 187
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 188 GDAATPGNAQTYNQNLINHVGKG 256
Score = 56.5 bits (117), Expect(2) = 1e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 278 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 397
>gb|BM330896.1|BM330896 PIC1_57_H12.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 553
Score = 97.3 bits (206), Expect(2) = 1e-030
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2 / +1
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 13 AQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 192
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 193 GDAATPGNAQTYNQNLINHVGKG 261
Score = 56.5 bits (117), Expect(2) = 1e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 283 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 402
>gb|BE600243.1|BE600243 PI1_94_A12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 473
Score = 97.3 bits (206), Expect(2) = 1e-030
Identities = 41/83 (49%), Positives = 52/83 (62%)
Frame = +2 / +1
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 10 AQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 189
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 190 GDAATPGNAQTYNQNLINHVGKG 258
Score = 56.5 bits (117), Expect(2) = 1e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 280 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 399
>gb|CN133263.1|CN133263 OX1_11_D08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_11_D08_A002 3', mRNA sequence
Length = 623
Score = 98.2 bits (208), Expect(2) = 2e-030
Identities = 41/88 (46%), Positives = 54/88 (61%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAYNAKIVERPARG 286
WP+AG AATP NA YN ++ +G
Sbjct: 181 WPSAGGDAATPGNAQTYNQNLINHVGKG 264
Score = 55.1 bits (114), Expect(2) = 2e-030
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +2 / +1
Query: 320 EVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 289 ETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 405
>gb|CX621973.1|CX621973 GABR1_61_F10.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_61_F10_A002 3', mRNA sequence
Length = 581
Score = 96.4 bits (204), Expect(2) = 3e-030
Identities = 41/83 (49%), Positives = 51/83 (61%)
Frame = +2 / +3
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + L YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 3 AQIALRYALFKSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 182
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 183 GDAATPGNAQTYNQNLINHVGKG 251
Score = 56.5 bits (117), Expect(2) = 3e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 273 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 392
>gb|CW178431.1|CW178431 104_592_11159555_148_36598_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159555, DNA
sequence
Length = 613
Score = 95.5 bits (202), Expect(2) = 5e-030
Identities = 40/83 (48%), Positives = 51/83 (61%)
Frame = +2 / -3
Query: 38 ANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
A + +YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 599 AQIAFSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAG 420
Query: 218 HPAATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 419 GDAATPGNAQTYNQNLINHVGKG 351
Score = 56.5 bits (117), Expect(2) = 5e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / -3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 329 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 210
>gb|BM318399.1|BM318399 PI1_13_B07.b9_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 534
Score = 95.5 bits (202), Expect(2) = 5e-030
Identities = 40/81 (49%), Positives = 51/81 (62%)
Frame = +2 / +3
Query: 44 VQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHP 223
+ L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG
Sbjct: 9 IALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGD 188
Query: 224 AATPQNATAYNAKIVERPARG 286
AATP NA YN ++ +G
Sbjct: 189 AATPGNAQTYNQNLINHVGKG 251
Score = 56.5 bits (117), Expect(2) = 5e-030
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 273 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 392
>gb|CN145947.1|CN145947 WOUND1_36_H12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_H12_A002 3', mRNA sequence
Length = 698
Score = 105 bits (225), Expect(2) = 1e-029
Identities = 43/93 (46%), Positives = 57/93 (61%)
Frame = +2 / +3
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFA 187
YP+ S+ + A + L+YALF + VQDG+ Y NLFD VD V+ALE G G V
Sbjct: 60 YPYFSYTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDTLVDTFVSALENAGAGNVGVV 239
Query: 188 VTETGWPTAGHPAATPQNATAYNAKIVERPARG 286
V+E+GWP+AG AATP NA YN ++ +G
Sbjct: 240 VSESGWPSAGGDAATPGNAQTYNQNLINHVGKG 338
Score = 45.1 bits (92), Expect(2) = 1e-029
Identities = 16/34 (47%), Positives = 23/34 (67%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAY 418
+E ++F +++ED K G E RHFG+F D S AY
Sbjct: 360 IETYIFAMFNEDKKTGAETGRHFGLFNPDKSPAY 461
>gb|BF656429.1|BF656429 FM1_45_G05.g2_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 319
Score = 130 bits (278), Expect(2) = 1e-029
Identities = 55/62 (88%), Positives = 55/62 (88%)
Frame = +2 / +3
Query: 281 RGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA*SW*FLERW 460
RGVGTPKRP VEVFLFDLYDEDGKPGPEFER FGIFRADG KAYDINFA*S *FLE W
Sbjct: 3 RGVGTPKRPGVPVEVFLFDLYDEDGKPGPEFERRFGIFRADGGKAYDINFA*S**FLE*W 182
Query: 461 TA 466
TA
Sbjct: 183 TA 188
Score = 123 bits (264), Expect(2) = 9e-028
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = -2 / -1
Query: 465 AVHRSRNYQL*AKLMSYALLPSALKMPKWRSNSGPGLPSSSYKSNRNTSTVSFGRFGVPT 286
AVH SRNYQL*AKLMSYAL PSALKMPK RSNSGPGLPSSSY+SNRNTST + GR GVPT
Sbjct: 187 AVHHSRNYQL*AKLMSYALPPSALKMPKRRSNSGPGLPSSSYRSNRNTSTGTPGRLGVPT 8
Query: 285 PR 280
PR
Sbjct: 7 PR 2
Score = 19.9 bits (37), Expect(2) = 1e-029
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 465 LVD*WINWCML 497
+VD*WIN +L
Sbjct: 190 IVD*WINCSLL 222
Score = 19.9 bits (37), Expect(2) = 9e-028
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -3 / -2
Query: 506 FFLQHTPVDPLIN 468
F +Q VDPLIN
Sbjct: 231 FSIQQ*AVDPLIN 193
>gb|CD432323.1|CD432323 ETH1_29_D04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_29_D04_A002 3', mRNA sequence
Length = 594
Score = 92.7 bits (196), Expect(2) = 3e-029
Identities = 39/78 (50%), Positives = 49/78 (62%)
Frame = +2 / +2
Query: 53 AYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAAT 232
+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AAT
Sbjct: 2 SYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAAT 181
Query: 233 PQNATAYNAKIVERPARG 286
P NA YN ++ +G
Sbjct: 182 PGNAQTYNQNLINHVGKG 235
Score = 56.5 bits (117), Expect(2) = 3e-029
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +2
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 257 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 376
>gb|CW145878.1|CW145878 104_538_11138696_116_34977_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11138696, DNA
sequence
Length = 662
Score = 74.8 bits (157), Expect(3) = 3e-028
Identities = 32/71 (45%), Positives = 39/71 (54%)
Frame = +2 / -1
Query: 74 GAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAY 253
G D Y NLFDA VD V+ALE G G V V+E+GWP+ G AATP NA Y
Sbjct: 512 GTVVQDDDGNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSDGGDAATPGNAQTY 333
Query: 254 NAKIVERPARG 286
N ++ +G
Sbjct: 332 NQNLINHVGQG 300
Score = 56.5 bits (117), Expect(3) = 3e-028
Identities = 21/41 (51%), Positives = 30/41 (73%)
Frame = +2 / -1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA*S 439
+E ++F +++ED K G E ERHFG+F D S AY INF+*+
Sbjct: 278 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYPINFS*T 156
Score = 32.7 bits (65), Expect(3) = 3e-028
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2 / -1
Query: 8 YPFISHVNDPANVQLAYALFGAGAAPVQD 94
YP+ S+ + A + L+YALF + VQD
Sbjct: 581 YPYFSYTGNEAQIALSYALFTSPGTVVQD 495
>gb|CW120724.1|CW120724 104_498_11109495_148_34655_060 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109495, DNA
sequence
Length = 544
Score = 82.6 bits (174), Expect(3) = 3e-028
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +2 / -2
Query: 212 AGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGI 391
AG A +NA YN + R ++ GTP RP V VFLF LY+ED KPG ERH+G+
Sbjct: 288 AGEAGANVRNAATYNRNLAARMSKNPGTPARPGAKVPVFLFSLYNEDQKPGAGSERHWGL 109
Query: 392 FRADGSKAYDIN 427
+ +GS+ Y+++
Sbjct: 108 YYPNGSRVYEVD 73
Score = 59.3 bits (123), Expect(3) = 3e-028
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2 / -2
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
LVYTNL D +DA+VAA+ + G+G V AV+ETGWP+ G
Sbjct: 408 LVYTNLLDQMLDAVVAAMGRLGYGDVKLAVSETGWPSGG 292
Score = 22.1 bits (42), Expect(3) = 3e-028
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 5 AYPFISHVNDPANVQLAYALFGAGAA 82
AYP+ + + + L YALF A+
Sbjct: 513 AYPYFAWSGNRNAISLDYALFQGAAS 436
>gb|BE598553.1|BE598553 PI1_83_B06.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 388
Score = 84.9 bits (179), Expect(3) = 5e-028
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 1 VQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 180
Query: 266 VERPARG 286
+ +G
Sbjct: 181 INHVGKG 201
Score = 56.5 bits (117), Expect(3) = 5e-028
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 223 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 342
Score = 20.8 bits (39), Expect(3) = 5e-028
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / +1
Query: 284 GVGTPKRP 307
G GTPKRP
Sbjct: 193 GKGTPKRP 216
>gb|CD431808.1|CD431808 ETH1_11_D08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_11_D08_A002 3', mRNA sequence
Length = 565
Score = 90.9 bits (192), Expect(2) = 8e-028
Identities = 39/77 (50%), Positives = 49/77 (63%)
Frame = +2 / +1
Query: 23 HVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETG 202
+ + A + L+YALF + VQDG+ Y NLFDA VD V+ALE G G V V+E+G
Sbjct: 1 YTGNEAQIALSYALFTSPGTVVQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESG 180
Query: 203 WPTAGHPAATPQNATAY 253
WP+AG AATP NA Y
Sbjct: 181 WPSAGGDAATPGNAQTY 231
Score = 53.8 bits (111), Expect(2) = 8e-028
Identities = 20/39 (51%), Positives = 28/39 (71%)
Frame = +2 / +1
Query: 320 EVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+ ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 223 QTYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 339
>gb|CW226549.1|CW226549 104_664_11204946_116_37218_069 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204946, DNA
sequence
Length = 606
Score = 80.8 bits (170), Expect(3) = 9e-028
Identities = 32/70 (45%), Positives = 43/70 (61%)
Frame = +2 / -1
Query: 212 AGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGI 391
AG A +NA YN + R ++ GTP RP V VFLF LY+ED KPG ERH+G+
Sbjct: 210 AGEAGANVRNAATYNRNLAARMSKNPGTPARPGAKVPVFLFSLYNEDQKPGAGSERHWGL 31
Query: 392 FRADGSKAYD 421
+ +GS+ Y+
Sbjct: 30 YYPNGSRVYE 1
Score = 59.3 bits (123), Expect(3) = 9e-028
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2 / -1
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
LVYTNL D +DA+VAA+ + G+G V AV+ETGWP+ G
Sbjct: 330 LVYTNLLDQMLDAVVAAMGRLGYGDVKLAVSETGWPSGG 214
Score = 22.1 bits (42), Expect(3) = 9e-028
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2 / -1
Query: 5 AYPFISHVNDPANVQLAYALFGAGAA 82
AYP+ + + + L YALF A+
Sbjct: 435 AYPYFAWSGNRNAISLDYALFQGAAS 358
>gb|CW255336.1|CW255336 104_719_11226181_116_35124_049 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226181, DNA
sequence
Length = 678
Score = 87.2 bits (184), Expect(2) = 2e-027
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +2 / -2
Query: 212 AGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGI 391
AG P AT +NA AY + +V G GTP P ++VE +LF LYDED KPGP ER FG+
Sbjct: 551 AGEPGATAENARAYVSNLVAHLRSGAGTPLMPGKSVETYLFALYDEDLKPGPTSERSFGL 372
Query: 392 FRADGSKAYD 421
+ D + AYD
Sbjct: 371 YHTDLTMAYD 342
Score = 56.1 bits (116), Expect(2) = 2e-027
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / -2
Query: 107 YTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
YTN+FDA +DA+ +AL + G+G V V ETGWPT G
Sbjct: 665 YTNMFDAQLDAVKSALVRAGYGSVDIVVAETGWPTKG 555
>gb|CW426368.1|CW426368 fsbb001f137l13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137l13, DNA
sequence
Length = 499
Score = 87.2 bits (184), Expect(2) = 2e-027
Identities = 36/70 (51%), Positives = 45/70 (64%)
Frame = +2 / +3
Query: 212 AGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGI 391
AG P AT +NA AY + +V G GTP P ++VE +LF LYDED KPGP ER FG+
Sbjct: 231 AGEPGATAENARAYVSNLVAHLRSGAGTPLMPGKSVETYLFALYDEDLKPGPTSERSFGL 410
Query: 392 FRADGSKAYD 421
+ D + AYD
Sbjct: 411 YHTDLTMAYD 440
Score = 56.1 bits (116), Expect(2) = 2e-027
Identities = 21/37 (56%), Positives = 27/37 (72%)
Frame = +2 / +3
Query: 107 YTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
YTN+FDA +DA+ +AL + G+G V V ETGWPT G
Sbjct: 117 YTNMFDAQLDAVKSALVRAGYGSVDIVVAETGWPTKG 227
>gb|CD464059.1|CD464059 ETH1_48_C06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_48_C06_A002 3', mRNA sequence
Length = 580
Score = 84.9 bits (179), Expect(2) = 7e-027
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 16 VQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 195
Query: 266 VERPARG 286
+ +G
Sbjct: 196 INHVGKG 216
Score = 56.5 bits (117), Expect(2) = 7e-027
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 238 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 357
>gb|CD233429.1|CD233429 SS1_2_H09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_2_H09_A012 3', mRNA sequence
Length = 576
Score = 84.9 bits (179), Expect(2) = 7e-027
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 16 VQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 195
Query: 266 VERPARG 286
+ +G
Sbjct: 196 INHVGKG 216
Score = 56.5 bits (117), Expect(2) = 7e-027
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 238 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 357
>gb|AW563729.1|AW563729 LG1_248_D09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 571
Score = 84.9 bits (179), Expect(2) = 7e-027
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2 / +3
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 6 VQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 185
Query: 266 VERPARG 286
+ +G
Sbjct: 186 INHVGKG 206
Score = 56.5 bits (117), Expect(2) = 7e-027
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 228 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 347
>gb|CD233608.1|CD233608 SS1_3_C05.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_3_C05_A012 3', mRNA sequence
Length = 570
Score = 84.9 bits (179), Expect(2) = 7e-027
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2 / +3
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 15 VQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 194
Query: 266 VERPARG 286
+ +G
Sbjct: 195 INHVGKG 215
Score = 56.5 bits (117), Expect(2) = 7e-027
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 237 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 356
>gb|CD231679.1|CD231679 SS1_23_G10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_23_G10_A012 3', mRNA sequence
Length = 568
Score = 84.9 bits (179), Expect(2) = 7e-027
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2 / +3
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 15 VQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 194
Query: 266 VERPARG 286
+ +G
Sbjct: 195 INHVGKG 215
Score = 56.5 bits (117), Expect(2) = 7e-027
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 237 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 356
>gb|BM318769.1|BM318769 PI1_16_B11.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 563
Score = 84.9 bits (179), Expect(2) = 7e-027
Identities = 35/67 (52%), Positives = 43/67 (64%)
Frame = +2 / +3
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQDG+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 3 VQDGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 182
Query: 266 VERPARG 286
+ +G
Sbjct: 183 INHVGKG 203
Score = 56.5 bits (117), Expect(2) = 7e-027
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +3
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 225 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 344
>gb|CW150687.1|CW150687 104_551_11143546_148_36309_043 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11143546, DNA
sequence
Length = 532
Score = 76.7 bits (161), Expect(3) = 1e-026
Identities = 31/67 (46%), Positives = 41/67 (61%)
Frame = +2 / -3
Query: 212 AGHPAATPQNATAYNAKIVERPARGVGTPKRPKETVEVFLFDLYDEDGKPGPEFERHFGI 391
AG A +NA YN + R ++ GTP RP V VFLF LY+ED KPG ERH+G+
Sbjct: 203 AGEAGANVRNAATYNRNLAARMSKNPGTPARPGAKVPVFLFSLYNEDQKPGAGSERHWGL 24
Query: 392 FRADGSK 412
+ +GS+
Sbjct: 23 YYPNGSR 3
Score = 59.3 bits (123), Expect(3) = 1e-026
Identities = 23/39 (58%), Positives = 30/39 (76%)
Frame = +2 / -3
Query: 101 LVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAG 217
LVYTNL D +DA+VAA+ + G+G V AV+ETGWP+ G
Sbjct: 323 LVYTNLLDQMLDAVVAAMGRLGYGDVKLAVSETGWPSGG 207
Score = 22.1 bits (42), Expect(3) = 1e-026
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = +2 / -3
Query: 5 AYPFISHVNDPANVQLAYALFGAGAA 82
AYP+ + + + L YALF A+
Sbjct: 428 AYPYFAWSGNRNAISLDYALFQGAAS 351
>gb|CX616613.1|CX616613 GABR1_29_A01.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_29_A01_A002 3', mRNA sequence
Length = 580
Score = 83.1 bits (175), Expect(2) = 2e-026
Identities = 34/67 (50%), Positives = 43/67 (64%)
Frame = +2 / +1
Query: 86 VQDGALVYTNLFDATVDALVAALEKEGFGGVLFAVTETGWPTAGHPAATPQNATAYNAKI 265
VQ+G+ Y NLFDA VD V+ALE G G V V+E+GWP+AG AATP NA YN +
Sbjct: 13 VQEGSNAYQNLFDALVDTFVSALENAGAGNVGVVVSESGWPSAGGDAATPGNAQTYNQNL 192
Query: 266 VERPARG 286
+ +G
Sbjct: 193 INHVGKG 213
Score = 56.5 bits (117), Expect(2) = 2e-026
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +2 / +1
Query: 317 VEVFLFDLYDEDGKPGPEFERHFGIFRADGSKAYDINFA* 436
+E ++F +++ED K G E ERHFG+F D S AY INF+*
Sbjct: 235 IETYIFAMFNEDKKTGAETERHFGLFNPDKSPAYSINFS* 354
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 497,326,638
Number of Sequences: 832831
Number of extensions: 5540733
Number of successful extensions: 77423
Number of sequences better than 1.0e-020: 108
length of database: 163,786,556
effective HSP length: 53
effective length of database: 119,646,513
effective search space used: 16511218794
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)