TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2485944.3.1
(991 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD204264.1|CD204264 HS1_4_G09.g1_A012 Heat-shocked seedl... 458 e-128
gb|CN138126.1|CN138126 OX1_61_H04.g1_A002 Oxidatively-stres... 155 2e-070
gb|CN134840.1|CN134840 OX1_28_G06.g1_A002 Oxidatively-stres... 155 5e-068
gb|CW196438.1|CW196438 104_620_11181167_116_36813_090 Sorgh... 184 1e-066
gb|BG048834.1|BG048834 OV1_23_F04.b1_A002 Ovary 1 (OV1) Sor... 253 2e-066
gb|CN131881.1|CN131881 OX1_2_G05.g1_A002 Oxidatively-stress... 158 8e-066
gb|CN147591.1|CN147591 WOUND1_50_E09.g1_A002 Wounded leaves... 140 3e-065
gb|CN137778.1|CN137778 OX1_59_B11.g1_A002 Oxidatively-stres... 247 3e-064
gb|CX614809.1|CX614809 GABR1_16_B02.g1_A002 GA- or brassino... 157 6e-064
gb|CW310289.1|CW310289 104_799_11469637_116_35745_057 Sorgh... 144 7e-063
gb|CX615327.1|CX615327 GABR1_19_B02.g1_A002 GA- or brassino... 241 1e-062
gb|CX622516.1|CX622516 GABR1_64_A04.g2_A002 GA- or brassino... 155 1e-061
gb|BM317823.1|BM317823 OV1_16_A02.b9_A002 Ovary 1 (OV1) Sor... 144 5e-061
gb|CW251456.1|CW251456 104_714_11223939_116_35066_014 Sorgh... 174 9e-061
gb|CF430017.1|CF430017 PH1_25_A07.g1_A002 Phosphorous-defic... 90 3e-060
gb|CN149616.1|CN149616 WOUND1_63_H02.g1_A002 Wounded leaves... 129 6e-060
gb|CD206268.1|CD206268 HS1_21_G09.g1_A012 Heat-shocked seed... 173 9e-060
gb|CN145955.1|CN145955 WOUND1_36_A11.g1_A002 Wounded leaves... 128 2e-059
gb|CN134469.1|CN134469 OX1_26_C04.g1_A002 Oxidatively-stres... 141 1e-057
gb|CN148779.1|CN148779 WOUND1_58_F02.g1_A002 Wounded leaves... 157 3e-056
gb|CX622583.1|CX622583 GABR1_64_G03.g2_A002 GA- or brassino... 157 6e-056
gb|CD224850.1|CD224850 CCC1_36_A05.g1_A007 Callus culture/c... 162 6e-056
gb|CD227138.1|CD227138 CCC1_4_B10.g1_A007 Callus culture/ce... 219 7e-056
gb|BG053707.1|BG053707 RHIZ2_8_G08.b1_A003 Rhizome2 (RHIZ2)... 218 1e-055
gb|BM324190.1|BM324190 PIC1_25_D10.b1_A002 Pathogen-infecte... 135 3e-055
gb|CW310290.1|CW310290 104_799_11469637_148_35749_057 Sorgh... 144 5e-055
gb|CD225143.1|CD225143 CCC1_38_B06.g1_A007 Callus culture/c... 215 6e-055
gb|CD203896.1|CD203896 HS1_2_H07.g1_A012 Heat-shocked seedl... 211 2e-053
gb|CN140627.1|CN140627 OX1_45_C11.g1_A002 Oxidatively-stres... 206 4e-052
gb|BE358051.1|BE358051 DG1_24_F08.b1_A002 Dark Grown 1 (DG1... 205 9e-052
gb|CD431402.1|CD431402 ETH1_8_D11.g1_A002 Ethylene-treated ... 204 2e-051
gb|CF487897.1|CF487897 POL1_46_C06.g1_A002 Pollen Sorghum b... 130 3e-051
gb|CD430247.1|CD430247 ETH1_17_H05.g1_A002 Ethylene-treated... 202 6e-051
gb|CW027560.1|CW027560 104_254_10498588_114_30395 Sorghum m... 132 3e-049
gb|CF431166.1|CF431166 NIT1_6_H05.g1_A002 Nitrogen-deficien... 195 7e-049
gb|CN143200.1|CN143200 WOUND1_14_E12.g1_A002 Wounded leaves... 157 5e-048
gb|CX620279.1|CX620279 GABR1_50_H04.g1_A002 GA- or brassino... 189 5e-047
gb|CW406041.1|CW406041 fsbb001f098n24f0 Sorghum methylation... 85 8e-047
gb|CD230053.1|CD230053 SS1_40_H11.g1_A012 Salt-stressed see... 157 3e-046
gb|CW391631.1|CW391631 fsbb001f077n22f0 Sorghum methylation... 113 4e-046
gb|CD462607.1|CD462607 ETH1_38_C08.g1_A002 Ethylene-treated... 141 7e-046
gb|BG355707.2|BG355707 EM1_18_E06.b1_A002 Embryo 1 (EM1) So... 157 1e-042
gb|CD223179.1|CD223179 CCC1_26_D08.g1_A007 Callus culture/c... 174 2e-042
gb|BG465813.1|BG465813 RHIZ2_48_H07.b1_A003 Rhizome2 (RHIZ2... 156 2e-042
gb|CX611816.1|CX611816 ANR1_26_H06.g1_A002 Anaerobic roots ... 173 4e-042
gb|CW038409.1|CW038409 104_270_10504910_114_30385 Sorghum m... 85 2e-041
gb|BF588266.1|BF588266 FM1_39_F09.b1_A003 Floral-Induced Me... 156 2e-039
gb|CD232208.1|CD232208 SS1_38_B01.g1_A012 Salt-stressed see... 157 5e-039
gb|CD230298.1|CD230298 SS1_42_G04.g1_A012 Salt-stressed see... 162 9e-039
gb|CN140888.1|CN140888 OX1_47_F12.g1_A002 Oxidatively-stres... 130 3e-038
gb|CF480252.1|CF480252 POL1_64_D07.g1_A002 Pollen Sorghum b... 130 3e-038
gb|BG560210.1|BG560210 RHIZ2_73_A04.b1_A003 Rhizome2 (RHIZ2... 158 1e-037
gb|CW489965.1|CW489965 fsbb001f275c23k0 Sorghum methylation... 157 2e-037
gb|CW111669.1|CW111669 104_485_11104448_148_34536_030 Sorgh... 79 4e-037
gb|CF427772.1|CF427772 PH1_10_G01.g1_A002 Phosphorous-defic... 141 6e-037
gb|CF431044.1|CF431044 NIT1_4_D08.g1_A002 Nitrogen-deficien... 141 6e-037
gb|CF432850.1|CF432850 NIT1_19_E10.g1_A002 Nitrogen-deficie... 141 6e-037
gb|CW304662.1|CW304662 104_789_11465901_116_35703_085 Sorgh... 148 8e-037
gb|CW282527.1|CW282527 104_758_11408758_116_35466_085 Sorgh... 147 2e-036
gb|CX612495.1|CX612495 GABR1_2_F05.g1_A002 GA- or brassinol... 150 3e-035
gb|CW021131.1|CW021131 104_109_10409366_114_30490 Sorghum m... 103 1e-034
gb|CF427940.1|CF427940 PH1_11_H04.g1_A002 Phosphorous-defic... 100 2e-034
gb|AW672498.1|AW672498 LG1_360_G12.b1_A002 Light Grown 1 (L... 146 6e-034
gb|CW251457.1|CW251457 104_714_11223939_148_35070_014 Sorgh... 83 2e-033
gb|BG560295.1|BG560295 RHIZ2_72_E05.b1_A003 Rhizome2 (RHIZ2... 144 2e-033
gb|BI075369.1|BI075369 IP1_19_G01.b1_A002 Immature pannicle... 140 4e-032
gb|CD234738.1|CD234738 SS1_17_F09.g1_A012 Salt-stressed see... 139 5e-032
gb|CX608431.1|CX608431 ANR1_38_C09.g1_A002 Anaerobic roots ... 122 2e-031
gb|BG739571.1|BG739571 EM1_82_E05.b1_A002 Embryo 1 (EM1) So... 136 6e-031
gb|CW479570.1|CW479570 fsbb001f238c15f0 Sorghum methylation... 85 1e-030
gb|CW250953.1|CW250953 104_713_11223665_116_35062_073 Sorgh... 92 2e-030
gb|CW222418.1|CW222418 104_657_11202363_148_37175_002 Sorgh... 126 3e-030
gb|BZ422560.1|BZ422560 id55d04.b1 WGS-SbicolorF (DH5a methy... 132 8e-030
gb|BG052222.1|BG052222 RHIZ2_7_F11.b1_A003 Rhizome2 (RHIZ2)... 130 4e-029
gb|CX612505.1|CX612505 GABR1_2_G03.g1_A002 GA- or brassinol... 128 1e-028
gb|BG102757.1|BG102757 RHIZ2_33_A08.b1_A003 Rhizome2 (RHIZ2... 125 9e-028
gb|CF484495.1|CF484495 POL1_25_D12.g1_A002 Pollen Sorghum b... 125 9e-028
gb|AW564057.1|AW564057 LG1_281_C06.b1_A002 Light Grown 1 (L... 125 1e-027
gb|CW479152.1|CW479152 fsbb001f237h02f0 Sorghum methylation... 124 2e-027
gb|CW250954.1|CW250954 104_713_11223665_148_35058_073 Sorgh... 124 2e-027
gb|BE361761.1|BE361761 DG1_82_E06.b1_A002 Dark Grown 1 (DG1... 78 3e-027
gb|BG159605.1|BG159605 OV2_6_G01.b1_A002 Ovary 2 (OV2) Sorg... 119 7e-027
gb|CF431075.1|CF431075 NIT1_4_F06.g1_A002 Nitrogen-deficien... 104 7e-026
gb|CX619153.1|CX619153 GABR1_43_G04.g1_A002 GA- or brassino... 117 2e-025
gb|CW409780.1|CW409780 fsbb001f104d18k0 Sorghum methylation... 83 6e-025
gb|CW122628.1|CW122628 104_501_11110773_148_34673_085 Sorgh... 92 2e-024
gb|CW479571.1|CW479571 fsbb001f238c15k0 Sorghum methylation... 114 3e-024
gb|BE598733.1|BE598733 PI1_81_A05.b1_A002 Pathogen induced ... 84 4e-024
gb|CW409779.1|CW409779 fsbb001f104d18f0 Sorghum methylation... 113 4e-024
gb|CN145887.1|CN145887 WOUND1_36_A11.b1_A002 Wounded leaves... 109 5e-024
gb|CL196288.1|CL196288 104_422_10942954_114_32317_041 Sorgh... 112 7e-024
gb|BG357925.1|BG357925 OV2_32_A04.b1_A002 Ovary 2 (OV2) Sor... 110 3e-023
gb|BF705089.1|BF705089 RHIZ2_1_C08.b1_A003 Rhizome2 (RHIZ2)... 110 5e-023
gb|CD234703.1|CD234703 SS1_17_E08.g1_A012 Salt-stressed see... 110 5e-023
gb|CW081920.1|CW081920 104_422_10942954_116_32321_041 Sorgh... 81 2e-022
gb|BG560494.1|BG560494 RHIZ2_75_B06.b1_A003 Rhizome2 (RHIZ2... 106 6e-022
>gb|CD204264.1|CD204264 HS1_4_G09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_4_G09_A012 5', mRNA sequence
Length = 663
Score = 458 bits (995), Expect = e-128
Identities = 185/216 (85%), Positives = 194/216 (89%)
Frame = +3 / +2
Query: 228 SLTRYRRLPVSWRHPTACLPRLH*GEFGERPVRKESTQSSVHMAAESENGNCKAWAARDP 407
SL R L PTACLPRLH GEFG+RPVRKESTQ SV MAAESE+GNC AWAARDP
Sbjct: 14 SLAGGRYLQPGDTRPTACLPRLHRGEFGDRPVRKESTQGSVQMAAESEHGNCNAWAARDP 193
Query: 408 SGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQV 587
SGVLSP+SFNRR VQS DV+LKI+Y GVCYADV WTRN +DSKYP+VPGHEIAGVVTQV
Sbjct: 194 SGVLSPYSFNRRPVQSSDVALKILY*GVCYADVVWTRNMHHDSKYPVVPGHEIAGVVTQV 373
Query: 588 GADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTH 767
GADVKGFKVGDHVGVGTYVNSCRDCENCN SL+NHCPK VYTFNGIDTDGTVTKGGYSTH
Sbjct: 374 GADVKGFKVGDHVGVGTYVNSCRDCENCNSSLENHCPKGVYTFNGIDTDGTVTKGGYSTH 553
Query: 768 IVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMR 875
IVVHERYCF+IPDGYPLAKAAPLLCAGITVYTPMMR
Sbjct: 554 IVVHERYCFQIPDGYPLAKAAPLLCAGITVYTPMMR 661
Score = 421 bits (913), Expect = e-116
Identities = 182/203 (89%), Positives = 187/203 (92%)
Frame = -1 / -1
Query: 877 CRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAF 698
CRIIGVYTVIPAHRRGAAFAKG*PSGI KQYLSWTTM*VE*PPFVTVPSVSMPLKV*T F
Sbjct: 663 CRIIGVYTVIPAHRRGAAFAKG*PSGIWKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TPF 484
Query: 697 GQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLF 518
GQW SRE+LQFSQSR EFT VPTPTWSPTLKPLTSAPT*VTTPAISCPGT GYFES +F
Sbjct: 483 GQWFSRELLQFSQSRHEFT*VPTPTWSPTLKPLTSAPT*VTTPAISCPGTTGYFESWCIF 304
Query: 517 RVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQALQLPFSDSAAM*TELC 338
RVQ TSA*QTPQY IF+ TS LCT LRLKL GERTPEGSLAAQALQLP SDSAA+*TE C
Sbjct: 303 RVQTTSA*QTPQYKIFNATSLLCTGLRLKLYGERTPEGSLAAQALQLPCSDSAAI*TEPC 124
Query: 337 VDSFRTGRSPNSPQCKRGKQAVG 269
VDSFRTGRSPNSP+CKRGKQAVG
Sbjct: 123 VDSFRTGRSPNSPRCKRGKQAVG 55
Score = 392 bits (850), Expect = e-108
Identities = 169/201 (84%), Positives = 178/201 (88%)
Frame = -3 / -3
Query: 875 SHHWSIHGYSSTQKRCCLRQRVAIGYFEAIPFMDYNVSGVTPLCDSSICINAIESINCFW 696
SHHWSIH YSSTQKRCCLRQR+AI Y EAIPFMDYNVSGVTPLCDSSICINAIESIN FW
Sbjct: 661 SHHWSIHSYSSTQKRCCLRQRIAIRYLEAIPFMDYNVSGVTPLCDSSICINAIESINSFW 482
Query: 695 AMVV*RDIAVLTITARVHICSNTYMVTHFKAFDICTNLSYNSSYLMPRNQRIF*IIELIP 516
+V+*R IAVLTI+A VHI SNTYMVTHFKAFDICTNLSY+SSYLMPRN RIF*I+ IP
Sbjct: 481 TVVL*RAIAVLTISA*VHISSNTYMVTHFKAFDICTNLSYDSSYLMPRNHRIF*IMVHIP 302
Query: 515 RPSNVCITDSTVYDLQRNIAALHCSAVKTVW*ENSRRISRCPSFAVAVL*FSSHVN*TLC 336
P NV ITDS+V DLQRNIAALH SAVK VW*ENSR ISRCPS AVAVL*FSSH+N*TL
Sbjct: 301 CPDNVSITDSSV*DLQRNIAALHWSAVKAVW*ENSRGISRCPSIAVAVL*FSSHLN*TLR 122
Query: 335 RFLPHRPLPELPSMQARQAGC 273
RFLPHR +PEL SMQA QAGC
Sbjct: 121 RFLPHRAVPELSSMQAWQAGC 59
Score = 343 bits (744), Expect(2) = 2e-095
Identities = 144/182 (79%), Positives = 149/182 (81%)
Frame = +2 / +1
Query: 332 IDTEFSSHGC*IRERQLQSLGSERSFWSSLTTQF*PQSSAKRRCFAEDHILWSLLCRRCL 511
ID FSS+GC*IR RQLQ LGSERS WSSLT Q *PQ+SAK+RC ED IL SLLC RCL
Sbjct: 118 IDAGFSSNGC*IRARQLQCLGSERSLWSSLTIQL*PQTSAKQRCCVEDLILRSLLC*RCL 297
Query: 512 DAE*AQ*FKISFGSWA*DSWSCNSGWCRCQRL*SG*PCRCWNICXXXXXXXXXQYLSRQP 691
D E A *FKIS GSWA*DSWS NSGWCRCQRL*SG*PCRCWN+C Q LSR+P
Sbjct: 298 DTEYAP*FKISCGSWA*DSWSRNSGWCRCQRL*SG*PCRCWNLCELMPRL*ELQ*LSREP 477
Query: 692 LPKSSLYFQWH*YRWNCHKGGLLHSHCSP*KVLLQNTRWLPFGEGSTSSVCWNNRVYSND 871
L K SLYFQWH*YRWNCHKGGLLHSHCSP*KVLL NT WL FGEGSTSSVCWNN VYSND
Sbjct: 478 LSKRSLYFQWH*YRWNCHKGGLLHSHCSP*KVLLPNT*WLSFGEGSTSSVCWNNCVYSND 657
Query: 872 AT 877
AT
Sbjct: 658 AT 663
Score = 327 bits (708), Expect(2) = 1e-089
Identities = 153/202 (75%), Positives = 158/202 (78%)
Frame = +1 / +3
Query: 271 QQPACRACIEXXXXXXXXXXXXXXVQFTWLLNQRTATAKLGQREILLEFSHHTVLTAEQC 450
+QPAC ACIE VQF WLLNQ TATA LGQREI LEFSHHT LTA+QC
Sbjct: 57 RQPACHACIEESSGTARCGRNRRRVQFKWLLNQSTATAMLGQREIPLEFSHHTALTADQC 236
Query: 451 KAAMFR*RSYTVESVMQTLLGRGISSMIQNILWFLGMXXXXXXXXXVQMSKALKWVTM*V 630
KAAM R*RSYT ESVM TL G GI +MIQNILWFLGM VQMSKALKWVTM*V
Sbjct: 237 KAAMLR*RSYTEESVMLTLSGHGICTMIQNILWFLGMR*LES*LRLVQMSKALKWVTM*V 416
Query: 631 LEHM*TLAVIVRTAISL*TTIAQKQFILSMALIQMELSQRGVTPLTL*SMKGIASKYPMA 810
LE M*T A IVRTAI+L* T QK+FILSMALIQMELSQRGVTPLTL*SMKGIASKY MA
Sbjct: 417 LELM*THAEIVRTAIAL*RTTVQKEFILSMALIQMELSQRGVTPLTL*SMKGIASKYLMA 596
Query: 811 TLWRRQHLFCVLE*PCILQ*CD 876
LWRRQHLFCVLE* CILQ*CD
Sbjct: 597 ILWRRQHLFCVLE*LCILQ*CD 662
Score = 174 bits (375), Expect(2) = 2e-085
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = -2 / -2
Query: 876 VASLEYTRLFQHTEEVLPSPKGSHRVF*SNTFHGLQCEWSNPPL*QFHLYQCH*KYKLLL 697
VASLEYT+LFQHTEEVLPSPK SH+VF SNTFHGLQCEWSNPPL*QFHLYQCH*KYKLLL
Sbjct: 662 VASLEYTQLFQHTEEVLPSPKDSHQVFGSNTFHGLQCEWSNPPL*QFHLYQCH*KYKLLL 483
Query: 696 GNGCLERYCSSHNHGKSSHMF 634
+G LE YCSSHN G SSH F
Sbjct: 482 DSGSLESYCSSHNLGMSSHKF 420
Score = 163 bits (351), Expect(2) = 2e-085
Identities = 71/95 (74%), Positives = 80/95 (84%)
Frame = -2 / -2
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAKHRRFALLCG*NCVVRELQKDLSLPKLCS 379
AQEP+DILNH AYS S+QR HNRL SI SS +HR FAL+CG*+C+VRELQ+DLSLPK CS
Sbjct: 344 AQEPQDILNHGAYSVSRQRQHNRLLSIRSSTQHRCFALVCG*SCMVRELQRDLSLPKHCS 165
Query: 378 CRSLIQQPCELNSVSIPSAPAAPRTPLNASAASRL 274
CR+LIQQP ELN SIPSAP PRT L+AS ASRL
Sbjct: 164 CRALIQQPFELNPASIPSAPGGPRTLLDASVASRL 60
Score = 28.1 bits (55), Expect(2) = 2e-095
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +3 / +1
Query: 222 YKSLTRYRRLPVSWRHPTACL 284
Y LTR R LP + RHPT L
Sbjct: 4 YNLLTRRRPLPATRRHPTDSL 66
Score = 25.4 bits (49), Expect(2) = 1e-089
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 221 L*IAHSLSSATCILATPN 274
L* AHS ++ATC ATP+
Sbjct: 3 L*FAHSPAAATCNPATPD 56
>gb|CN138126.1|CN138126 OX1_61_H04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_61_H04_A002 5', mRNA sequence
Length = 777
Score = 155 bits (333), Expect(2) = 2e-070
Identities = 60/127 (47%), Positives = 83/127 (65%)
Frame = +3 / +3
Query: 348 VHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKL 527
V M E WAARD SG LSP+SF+ R V++K+++CG+C+ D+ +N+
Sbjct: 66 VFMDMEQGCKTAHGWAARDASGHLSPYSFSARIQGDAGVTIKVLFCGICHTDLHVIKNEW 245
Query: 528 NDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAV 707
++ YP+VPGHE+ GVVT VG V FK GD VGVG +V+SCR CE+C+ +N+CP V
Sbjct: 246 GNAMYPVVPGHEVVGVVTDVGHGVTKFKAGDTVGVGYFVDSCRTCESCSTGHENYCPDLV 425
Query: 708 YTFNGID 728
T NG+D
Sbjct: 426 LTSNGVD 446
Score = 132 bits (283), Expect(2) = 2e-070
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
G TKGG+S +VV + + ++P+ PL AAPLLCAG+TVY+PM ++ +N+PGK LGV+
Sbjct: 459 GATTKGGFSDVLVVSQDFVVRVPESLPLDGAAPLLCAGVTVYSPMAQYALNEPGKHLGVV 638
Query: 915 GLGGLGHMAVKFGKAFGLKVTVFST 989
GLGGLGHMAVKF KAFG+ VTV S+
Sbjct: 639 GLGGLGHMAVKFAKAFGMTVTVISS 713
Score = 94.5 bits (200), Expect(3) = 7e-026
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -3
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T GQ S +LQ SQ RQE T PTPT SP L +T PT VTTP SCPGT
Sbjct: 445 STPLEVRTRSGQ*FSCPVLQLSQVRQESTK*PTPTVSPALNLVTPWPTSVTTPTTSCPGT 266
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ T L KL GER PE SLAA
Sbjct: 265 TGYIALPHSFLMTWRSVWQMPQKSTLIVTPASP*ILAEKL*GERWPEASLAA 110
Score = 35.4 bits (71), Expect(3) = 7e-026
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -1 / -3
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG +G+YTV PA GAA ++G SG TT E PP V P
Sbjct: 619 PGSLSAYCAMGLYTVTPAQSSGAAPSRGRLSGTRTTKSWLTTSTSEKPPLVVAP 458
Score = 26.7 bits (52), Expect(3) = 7e-026
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = -1 / -3
Query: 985 LKTVTLRPNALPNFTA 938
L TVT+ PNAL N TA
Sbjct: 709 LMTVTVMPNALANLTA 662
>gb|CN134840.1|CN134840 OX1_28_G06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_28_G06_A002 5', mRNA sequence
Length = 700
Score = 155 bits (334), Expect(2) = 5e-068
Identities = 59/127 (46%), Positives = 84/127 (66%)
Frame = +3 / +2
Query: 348 VHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKL 527
+ M E + WAARD SG LSP+SF+ R DV++K+++CG+C+ D+ +N+
Sbjct: 65 IFMDMEQGCKTAQGWAARDASGHLSPYSFSARIQGDADVTIKVLFCGICHTDLHVIKNEW 244
Query: 528 NDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAV 707
++ YP+VPGHE+ GVVT VG V FK GD VGVG +V+SCR CE+C+ +N+CP
Sbjct: 245 GNAMYPVVPGHEVVGVVTDVGHGVTKFKAGDTVGVGYFVDSCRTCESCSTGHENYCPDLD 424
Query: 708 YTFNGID 728
T NG+D
Sbjct: 425 LTSNGVD 445
Score = 124 bits (265), Expect(2) = 5e-068
Identities = 49/81 (60%), Positives = 62/81 (76%)
Frame = +3 / +2
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
G TKGG+S +VV + + ++P+ PL A PLLCAGITVY+PM ++ +N+PGK LGVI
Sbjct: 458 GATTKGGFSDVLVVSQDFIVRVPESLPLDGATPLLCAGITVYSPMAQYALNEPGKHLGVI 637
Query: 915 GLGGLGHMAVKFGKAFGLKVT 977
GLGGLGHMA KF KAFG+ VT
Sbjct: 638 GLGGLGHMADKFAKAFGMTVT 700
Score = 95.0 bits (201), Expect(2) = 1e-023
Identities = 55/112 (49%), Positives = 60/112 (53%)
Frame = -1 / -2
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V + GQ S +LQ SQ RQE T PTPT SP L +T PT VTTP SCPGT
Sbjct: 444 STPLEVRSRSGQ*FSCPVLQLSQVRQESTK*PTPTVSPALNLVTPWPTSVTTPTTSCPGT 265
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GER PE SLAA
Sbjct: 264 TGYIALPHSFLMTWRSVWQMPQKSTLIVTSASP*ILAEKL*GERWPEASLAA 109
Score = 36.3 bits (73), Expect(2) = 1e-023
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -1 / -2
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG +G+YTVIPA G A ++G SG TT E PP V P
Sbjct: 618 PGSLSAYCAMGLYTVIPAQSSGVAPSRGRLSGTRTMKSWLTTSTSEKPPLVVAP 457
>gb|CW196438.1|CW196438 104_620_11181167_116_36813_090 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11181167, DNA
sequence
Length = 677
Score = 184 bits (397), Expect(2) = 1e-066
Identities = 71/77 (92%), Positives = 74/77 (96%)
Frame = +3 / -2
Query: 558 HEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDG 737
HEIAGVVTQVGADVK FKVGDHVGVGTYVNSCRDCENCN SL+NHCP+ V+TFNGIDTDG
Sbjct: 280 HEIAGVVTQVGADVKAFKVGDHVGVGTYVNSCRDCENCNSSLENHCPERVFTFNGIDTDG 101
Query: 738 TVTKGGYSTHIVVHERY 788
TVTKGGYSTHIVVHERY
Sbjct: 100 TVTKGGYSTHIVVHERY 50
Score = 169 bits (364), Expect(2) = 4e-060
Identities = 69/78 (88%), Positives = 73/78 (93%)
Frame = -3 / +2
Query: 788 IPFMDYNVSGVTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHICSNTYMVTHF 609
+PFMDYNVSGVTPLCDSSICINAIES N FWA+V+*R IAVLTI+A VHICSNTYMVTHF
Sbjct: 50 VPFMDYNVSGVTPLCDSSICINAIESKNSFWAVVL*RAIAVLTISA*VHICSNTYMVTHF 229
Query: 608 KAFDICTNLSYNSSYLMP 555
K FDICTNLSYNSSYLMP
Sbjct: 230 KGFDICTNLSYNSSYLMP 283
Score = 166 bits (357), Expect(2) = 2e-057
Identities = 63/79 (79%), Positives = 65/79 (82%)
Frame = +2 / -1
Query: 557 A*DSWSCNSGWCRCQRL*SG*PCRCWNICXXXXXXXXXQYLSRQPLPKSSLYFQWH*YRW 736
A*DSWSCNSGWCRCQ L*SG*PCRCWNIC Q LSR+PLP+ S YFQWH*YRW
Sbjct: 281 A*DSWSCNSGWCRCQSL*SG*PCRCWNICELMPRL*ELQ*LSREPLPRKSFYFQWH*YRW 102
Query: 737 NCHKGGLLHSHCSP*KVLL 793
NCHKGGLLHSHCSP*KV L
Sbjct: 101 NCHKGGLLHSHCSP*KVQL 45
Score = 166 bits (356), Expect(2) = 2e-058
Identities = 70/77 (90%), Positives = 71/77 (92%)
Frame = -1 / +3
Query: 787 YLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTL 608
YLSWTTM*VE*PPFVTVPSVSMPLKV T GQW SRE+LQFSQSR EFTYVPTPTWSPTL
Sbjct: 51 YLSWTTM*VE*PPFVTVPSVSMPLKVKTLSGQWFSRELLQFSQSRHEFTYVPTPTWSPTL 230
Query: 607 KPLTSAPT*VTTPAISC 557
K LTSAPT*VTTPAISC
Sbjct: 231 KALTSAPT*VTTPAISC 281
Score = 122 bits (262), Expect = 6e-027
Identities = 62/88 (70%), Positives = 68/88 (77%)
Frame = +1 / -3
Query: 523 SSMIQNILWFLGMXXXXXXXXXVQMSKALKWVTM*VLEHM*TLAVIVRTAISL*TTIAQK 702
+S + +L GM VQMSK LKWVTM*VLEHM*T A IVRTAI+L* T AQK
Sbjct: 315 TSCLSMVLICAGMR*LEL*LRLVQMSKPLKWVTM*VLEHM*THAEIVRTAIAL*RTTAQK 136
Query: 703 QFILSMALIQMELSQRGVTPLTL*SMKG 786
+F+LSMALIQMELSQRGVTPLTL*SMKG
Sbjct: 135 EFLLSMALIQMELSQRGVTPLTL*SMKG 52
Score = 113 bits (242), Expect(2) = 6e-039
Identities = 44/51 (86%), Positives = 45/51 (88%)
Frame = -2 / +1
Query: 786 TFHGLQCEWSNPPL*QFHLYQCH*KYKLLLGNGCLERYCSSHNHGKSSHMF 634
TFHGLQCEWSNPPL*QFHLYQCH*K KL LG+G LE YCSSHN G SSHMF
Sbjct: 52 TFHGLQCEWSNPPL*QFHLYQCH*K*KLFLGSGSLESYCSSHNLGMSSHMF 204
Score = 90.9 bits (192), Expect(2) = 1e-066
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +3 / -1
Query: 441 RAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPG 557
RAVQS DV+LKIIYCGVCYADV WTRN LNDSKYPLVPG
Sbjct: 479 RAVQSSDVALKIIYCGVCYADVGWTRNMLNDSKYPLVPG 363
Score = 84.0 bits (177), Expect(2) = 4e-060
Identities = 35/41 (85%), Positives = 38/41 (92%)
Frame = -1 / +1
Query: 556 PGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRL 434
PGTKGYFESLS+FRVQ TSA*QTPQYMIFS TS LCTAL++
Sbjct: 364 PGTKGYFESLSMFRVQPTSA*QTPQYMIFSATSLLCTALKI 486
Score = 82.2 bits (173), Expect(2) = 2e-058
Identities = 34/40 (85%), Positives = 37/40 (92%)
Frame = -3 / +3
Query: 560 MPRNQRIF*IIELIPRPSNVCITDSTVYDLQRNIAALHCS 441
+PRNQRIF*IIE +P P+NV ITDSTVYDLQRNIAALHCS
Sbjct: 360 LPRNQRIF*IIEHVPCPTNVSITDSTVYDLQRNIAALHCS 479
Score = 78.0 bits (164), Expect(2) = 2e-057
Identities = 33/39 (84%), Positives = 34/39 (87%)
Frame = +2 / -3
Query: 440 QSSAKRRCFAEDHILWSLLCRRCLDAE*AQ*FKISFGSW 556
QSSAK+RC AEDHILWSLLC R LD E AQ*FKISFGSW
Sbjct: 480 QSSAKQRCCAEDHILWSLLC*RWLDTEHAQ*FKISFGSW 364
Score = 71.6 bits (150), Expect(2) = 6e-039
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = -2 / +2
Query: 555 QEPKDILNH*AYSASKQRLHNRLHSI*SSAKHRRFALL 442
QEPKDILNH*A S S QR HNRLHSI*SSA+HR FALL
Sbjct: 365 QEPKDILNH*ACSVSNQRQHNRLHSI*SSAQHRCFALL 478
>gb|BG048834.1|BG048834 OV1_23_F04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 327
Score = 253 bits (548), Expect = 2e-066
Identities = 97/107 (90%), Positives = 102/107 (95%)
Frame = +3 / +2
Query: 459 DVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGT 638
DV+LKI+YCGVCYADV WTRN +DSKYP+VPGHEIAGVVTQVGADVKGFKVGDHVGVGT
Sbjct: 5 DVALKILYCGVCYADVVWTRNMHHDSKYPVVPGHEIAGVVTQVGADVKGFKVGDHVGVGT 184
Query: 639 YVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVH 779
YVNSCRDCENCN SL+NHCPK VYTFNGIDTDGTVTKGGYSTHIVVH
Sbjct: 185 YVNSCRDCENCNSSLENHCPKGVYTFNGIDTDGTVTKGGYSTHIVVH 325
Score = 222 bits (480), Expect = 5e-057
Identities = 95/108 (87%), Positives = 98/108 (90%)
Frame = -1 / -1
Query: 781 SWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKP 602
SWTTM*VE*PPFVTVPSVSMPLKV*T FGQW SRE+LQFSQSR EFT VPTPTWSPTLKP
Sbjct: 327 SWTTM*VE*PPFVTVPSVSMPLKV*TPFGQWFSRELLQFSQSRHEFT*VPTPTWSPTLKP 148
Query: 601 LTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETS 458
LTSAPT*VTTPAISCPGT GYFES +FRVQ TSA*QTPQY IF+ TS
Sbjct: 147 LTSAPT*VTTPAISCPGTTGYFESWCIFRVQTTSA*QTPQYKIFNATS 4
Score = 213 bits (460), Expect = 3e-054
Identities = 85/109 (77%), Positives = 88/109 (80%)
Frame = +2 / +1
Query: 455 RRCFAEDHILWSLLCRRCLDAE*AQ*FKISFGSWA*DSWSCNSGWCRCQRL*SG*PCRCW 634
+RC ED ILWSLLC RCLD E A *FKIS GSWA*DSWS NSGWCRCQRL*SG*PCRCW
Sbjct: 1 QRCCVEDLILWSLLC*RCLDTEYAP*FKISCGSWA*DSWSRNSGWCRCQRL*SG*PCRCW 180
Query: 635 NICXXXXXXXXXQYLSRQPLPKSSLYFQWH*YRWNCHKGGLLHSHCSP* 781
N+C Q LSR+PL K SLYFQWH*YRWNCHKGGLLHSHCSP*
Sbjct: 181 NLCELMPRL*ELQ*LSREPLSKRSLYFQWH*YRWNCHKGGLLHSHCSP* 327
Score = 208 bits (449), Expect = 1e-052
Identities = 91/108 (84%), Positives = 96/108 (88%)
Frame = -3 / -3
Query: 779 MDYNVSGVTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHICSNTYMVTHFKAF 600
MDYNVSGVTPLCDSSICINAIESIN FW +V+*R IAVLTI+A VHI SNTYMVTHFKAF
Sbjct: 325 MDYNVSGVTPLCDSSICINAIESINSFWTVVL*RAIAVLTISA*VHISSNTYMVTHFKAF 146
Query: 599 DICTNLSYNSSYLMPRNQRIF*IIELIPRPSNVCITDSTVYDLQRNIA 456
DICTNLSY+SSYLMPRN RIF*I+ IP P NV ITDSTV DLQRNIA
Sbjct: 145 DICTNLSYDSSYLMPRNHRIF*IMVHIPCPDNVSITDSTV*DLQRNIA 2
Score = 171 bits (367), Expect = 2e-041
Identities = 85/108 (78%), Positives = 88/108 (81%)
Frame = +1 / +3
Query: 457 AMFR*RSYTVESVMQTLLGRGISSMIQNILWFLGMXXXXXXXXXVQMSKALKWVTM*VLE 636
AM R*RSYTVESVM TL G GI +MIQNILWFLGM VQMSKALKWVTM*VLE
Sbjct: 3 AMLR*RSYTVESVMLTLSGHGICTMIQNILWFLGMR*LES*LRLVQMSKALKWVTM*VLE 182
Query: 637 HM*TLAVIVRTAISL*TTIAQKQFILSMALIQMELSQRGVTPLTL*SM 780
M*T A IVRTAI+L* T QK+FILSMALIQMELSQRGVTPLTL*SM
Sbjct: 183 LM*THAEIVRTAIAL*RTTVQKEFILSMALIQMELSQRGVTPLTL*SM 326
Score = 109 bits (233), Expect(2) = 5e-036
Identities = 42/49 (85%), Positives = 43/49 (87%)
Frame = -2 / -2
Query: 780 HGLQCEWSNPPL*QFHLYQCH*KYKLLLGNGCLERYCSSHNHGKSSHMF 634
HGLQCEWSNPPL*QFHLYQCH*KYKLLL +G LE YCSSHN G SSH F
Sbjct: 326 HGLQCEWSNPPL*QFHLYQCH*KYKLLLDSGSLESYCSSHNLGMSSHKF 180
Score = 63.4 bits (132), Expect(2) = 5e-036
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = -2 / -2
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAKHR 457
AQEP+DILNH AYS S+QR HNRLHSI SS +HR
Sbjct: 104 AQEPQDILNHGAYSVSRQRQHNRLHSIRSSTQHR 3
>gb|CN131881.1|CN131881 OX1_2_G05.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_2_G05_A002 5', mRNA sequence
Length = 676
Score = 158 bits (340), Expect(2) = 8e-066
Identities = 61/127 (48%), Positives = 84/127 (66%)
Frame = +3 / +3
Query: 348 VHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKL 527
V M E WAARD SG LSP+SF+ R DV++K+++CG+C+ D+ +N+
Sbjct: 66 VFMDMEQGCKTAHGWAARDASGHLSPYSFSARIQGDADVTIKVLFCGICHTDLHVIKNEW 245
Query: 528 NDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAV 707
++ YP+VPGHE+ GVVT VG V FK GD VGVG +V+SCR CE+C+ +N+CP V
Sbjct: 246 GNAMYPVVPGHEVVGVVTDVGHGVTKFKAGDTVGVGYFVDSCRTCESCSTGHENYCPDLV 425
Query: 708 YTFNGID 728
T NG+D
Sbjct: 426 LTSNGVD 446
Score = 114 bits (243), Expect(2) = 8e-066
Identities = 43/72 (59%), Positives = 57/72 (79%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
G TKGG+S +VV + + ++P+ PL AAPLLCAG+TVY+PM ++ +N+PGK LGV+
Sbjct: 459 GATTKGGFSDVLVVSQDFVVRVPESLPLDGAAPLLCAGVTVYSPMAQYALNEPGKHLGVV 638
Query: 915 GLGGLGHMAVKF 950
GLGGLGHMAVKF
Sbjct: 639 GLGGLGHMAVKF 674
Score = 96.8 bits (205), Expect(2) = 7e-024
Identities = 56/112 (50%), Positives = 60/112 (53%)
Frame = -1 / -1
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T GQ S +LQ SQ RQE T PTPT SP L +T PT VTTP SCPGT
Sbjct: 445 STPLEVRTRSGQ*FSCPVLQLSQVRQESTK*PTPTVSPALNLVTPWPTSVTTPTTSCPGT 266
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GER PE SLAA
Sbjct: 265 TGYIALPHSFLMTWRSVWQMPQKSTLIVTSASP*ILAEKL*GERWPEASLAA 110
Score = 35.4 bits (71), Expect(2) = 7e-024
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG +G+YTV PA GAA ++G SG TT E PP V P
Sbjct: 619 PGSLSAYCAMGLYTVTPAQSSGAAPSRGRLSGTRTTKSWLTTSTSEKPPLVVAP 458
>gb|CN147591.1|CN147591 WOUND1_50_E09.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_E09_A002 5', mRNA sequence
Length = 785
Score = 140 bits (301), Expect(2) = 3e-065
Identities = 51/81 (62%), Positives = 66/81 (81%)
Frame = +3 / +2
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNM 884
++T+N +D DGTVT GGYS+ + VHER+ + PDG PL + APLLCAGITVY+PM H +
Sbjct: 542 IFTYNSVDRDGTVTYGGYSSSVTVHERFVVRFPDGMPLDRGAPLLCAGITVYSPMKYHGL 721
Query: 885 NQPGKSLGVIGLGGLGHMAVK 947
N+PGK +GV+GLGGLGH+AVK
Sbjct: 722 NKPGKHVGVLGLGGLGHVAVK 784
Score = 130 bits (278), Expect(2) = 3e-065
Identities = 50/107 (46%), Positives = 71/107 (66%)
Frame = +3 / +2
Query: 375 GNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVP 554
G AA D SG L+P + RR+ DV++KI++CG+C++D+ +N+ ++ YP+VP
Sbjct: 209 GKAVGLAAHDASGHLAPLTITRRSTGDDDVAIKILFCGMCHSDLHSIKNEWGNAMYPMVP 388
Query: 555 GHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
GHEIAGVVT+VG +V F GD VGVG VNSC+ C+ C +N C
Sbjct: 389 GHEIAGVVTEVGKNVTRFNPGDRVGVGCMVNSCQSCDGCAEGFENTC 529
Score = 81.7 bits (172), Expect(2) = 9e-026
Identities = 46/107 (42%), Positives = 52/107 (48%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q S+ Q S EFT PTPT SP L +T PT VTTPAIS PGT GY F
Sbjct: 528 QVFSKPSAQPSHDWHEFTMQPTPTRSPGLNLVTFLPTSVTTPAISWPGTMGYMALPHSFL 349
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQALQLP 374
+ S PQ IF TS LR+ + G R P+ S AA P
Sbjct: 348 MLCRSEWHIPQNRIFIATSSSPVLLRVMVSGARWPDASCAASPTAFP 208
Score = 57.0 bits (118), Expect(2) = 9e-026
Identities = 30/61 (49%), Positives = 35/61 (57%)
Frame = -1 / -3
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG F +G+YTV+PAH GA + G PSG S T +E*PP VTVPS S
Sbjct: 735 FPGLFRPWYFMGLYTVMPAHSSGAPRSSGIPSGNRTTNRSCTVTLLE*PP*VTVPSRSTE 556
Query: 718 L 716
L
Sbjct: 555 L 553
>gb|CN137778.1|CN137778 OX1_59_B11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_59_B11_A002 5', mRNA sequence
Length = 784
Score = 247 bits (533), Expect = 3e-064
Identities = 95/218 (43%), Positives = 141/218 (64%)
Frame = +3 / +2
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
+QS M + + WAARD +G LSP+++ R DV +K++YCG+C+ D+
Sbjct: 131 SQSKRRMGSLASERKVVGWAARDATGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQA 310
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C C +++ +C
Sbjct: 311 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYC 490
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMR 875
K ++++N + TDG T+GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+
Sbjct: 491 NKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKA 670
Query: 876 HNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFST 989
+ PG G++GLGG+GHM VK KA G VTV S+
Sbjct: 671 FGLTAPGLRGGIVGLGGVGHMGVKVAKAMGHHVTVISS 784
Score = 90.0 bits (190), Expect(2) = 1e-023
Identities = 50/102 (49%), Positives = 56/102 (54%)
Frame = -1 / -2
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S LQ SRQ T PTPT SPT LTS PT T+P SCPGT GYFE+ F
Sbjct: 489 QYCSTLALQGLHSRQHPTITPTPTTSPTPYLLTSGPTSTTSPTTSCPGTIGYFEAPRWFL 310
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
S Q PQ F+ TS LR+ + GER P SLAAQ
Sbjct: 309 AWWMSVWQIPQ*STFTTTSSGPVFLRV*V*GERCPVASLAAQ 184
Score = 41.4 bits (84), Expect(2) = 1e-023
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1 / -2
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V PSV
Sbjct: 660 GLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEAKPPCVGRPSV 523
>gb|CX614809.1|CX614809 GABR1_16_B02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_16_B02_A002 5', mRNA sequence
Length = 710
Score = 157 bits (337), Expect(2) = 6e-064
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 166 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 345
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 346 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 504
Score = 109 bits (232), Expect(2) = 6e-064
Identities = 41/64 (64%), Positives = 51/64 (79%)
Frame = +3 / +1
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
G TKGG+S IVV+E Y ++PDG L + APLLCAG+TVY+PMMRH +N+PGK LGV+
Sbjct: 517 GVPTKGGFSDVIVVNEHYVVRVPDGLALDRTAPLLCAGVTVYSPMMRHGLNEPGKHLGVV 696
Query: 915 GLGG 926
GLGG
Sbjct: 697 GLGG 708
Score = 95.5 bits (202), Expect(3) = 2e-030
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -1
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 503 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 324
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 323 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 168
Score = 46.0 bits (94), Expect(3) = 2e-030
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG RI+G+YTV PA GA + PSG S+TTM E PP V P
Sbjct: 677 PGSLRPWRIMGLYTVTPAQSSGAVRSSARPSGTRTT*CSFTTMTSENPPLVGTP 516
Score = 30.9 bits (61), Expect(3) = 2e-030
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 154 PGRLSPPSSPAALASPRTPLLAAATAEL 71
>gb|CW310289.1|CW310289 104_799_11469637_116_35745_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469637, DNA
sequence
Length = 678
Score = 144 bits (310), Expect(3) = 7e-063
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +3 / +3
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNM 884
++T+N +D DGTVT GGYS+ + VHER+ + PDG PL + APLLCAGITVY+PM H +
Sbjct: 327 IFTYNSVDRDGTVTYGGYSSSVTVHERFVVRFPDGMPLDRGAPLLCAGITVYSPMKYHGL 506
Query: 885 NQPGKSLGVIGLGGLGHMAVKFGKA 959
N+PGK +GV+GLGGLGH+AVK KA
Sbjct: 507 NKPGKHVGVLGLGGLGHVAVKLAKA 581
Score = 113 bits (241), Expect(3) = 7e-063
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +3 / +3
Query: 441 RAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGD 620
R+ DV++KI++CG+C++D+ +N+ ++ YP+VPGHEIAGVVT+VG +V F GD
Sbjct: 60 RSTGDDDVAIKILFCGMCHSDLHSIKNEWGNAMYPMVPGHEIAGVVTEVGKNVTRFNPGD 239
Query: 621 HVGVGTYVNSCRDCENCNISLDNHC 695
VGVG VNSC+ C+ C +N C
Sbjct: 240 RVGVGCMVNSCQSCDGCAEGFENTC 314
Score = 66.1 bits (138), Expect(2) = 2e-021
Identities = 37/79 (46%), Positives = 40/79 (50%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q S+ Q S EFT PTPT SP L +T PT VTTPAIS PGT GY F
Sbjct: 313 QVFSKPSAQPSHDWHEFTMQPTPTRSPGLNLVTFLPTSVTTPAISWPGTMGYMALPHSFL 134
Query: 514 VQATSA*QTPQYMIFSETS 458
+ S PQ IF TS
Sbjct: 133 MLCRSEWHIPQNRIFIATS 77
Score = 57.9 bits (120), Expect(2) = 2e-021
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -3
Query: 958 ALPNFTAXXXXXXXXXXPSDFPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLS 779
AL + TA P+ FPG F +G+YTV+PAH GA + G PSG S
Sbjct: 580 ALASLTATWPRPPSPSTPTCFPGLFRPWYFMGLYTVMPAHSSGAPRSSGIPSGNRTTNRS 401
Query: 778 WTTM*VE*PPFVTVPSVSMPL 716
T +E*PP VTVPS S L
Sbjct: 400 CTVTLLE*PP*VTVPSRSTEL 338
Score = 23.5 bits (45), Expect(3) = 7e-063
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / +3
Query: 957 AFGLKVTVFST 989
AFG+KVTV ST
Sbjct: 582 AFGMKVTVIST 614
>gb|CX615327.1|CX615327 GABR1_19_B02.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_19_B02_A002 5', mRNA sequence
Length = 824
Score = 241 bits (521), Expect = 1e-062
Identities = 94/218 (43%), Positives = 139/218 (63%)
Frame = +3 / +1
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
+QS M + + WAARD +G LSP++ R DV +K++YCG+C+ D+
Sbjct: 154 SQSKRRMGSLASERKVVGWAARDATGHLSPYTHTLRNTGPEDVVVKVLYCGICHTDIHQA 333
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C C +++ +C
Sbjct: 334 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYC 513
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMR 875
K ++++N + TDG T+GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+
Sbjct: 514 NKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKA 693
Query: 876 HNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFST 989
+ PG G++GLGG+ HM VK KA G VTV S+
Sbjct: 694 FGLTAPGLRGGIVGLGGVRHMGVKVAKAMGHHVTVISS 807
Score = 90.4 bits (191), Expect(2) = 1e-023
Identities = 50/102 (49%), Positives = 56/102 (54%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S LQ SRQ T PTPT SPT LTS PT T+P SCPGT GYFE+ F
Sbjct: 512 QYCSTLALQGLHSRQHPTITPTPTTSPTPYLLTSGPTSTTSPTTSCPGTIGYFEAPRWFL 333
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
S Q PQ F+ TS LR+ + GER P SLAAQ
Sbjct: 332 AWWMSVWQIPQ*STFTTTSSGPVFLRVWV*GERCPVASLAAQ 207
Score = 41.4 bits (84), Expect(2) = 1e-023
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1 / -1
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V PSV
Sbjct: 683 GLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEAKPPCVGRPSV 546
>gb|CX622516.1|CX622516 GABR1_64_A04.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_A04_A002 5', mRNA sequence
Length = 754
Score = 155 bits (333), Expect(2) = 1e-061
Identities = 57/113 (50%), Positives = 79/113 (69%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 218 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 397
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C T NG+D
Sbjct: 398 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVAQTSNGVD 556
Score = 103 bits (220), Expect(2) = 1e-061
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = +3 / +2
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
G TKGG+S IVV+E Y ++PDG L + APLLCAG+TVY+PMMRH +N+PGK LGV+
Sbjct: 569 GVPTKGGFSDVIVVNEHYVVRVPDGLALDRTAPLLCAGVTVYSPMMRHGLNEPGKHLGVV 748
Query: 915 GL 920
GL
Sbjct: 749 GL 754
Score = 93.2 bits (197), Expect(3) = 9e-030
Identities = 54/112 (48%), Positives = 58/112 (51%)
Frame = -1 / -2
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 555 STPLEVCATPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 376
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 375 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 220
Score = 46.0 bits (94), Expect(3) = 9e-030
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -1 / -2
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG RI+G+YTV PA GA + PSG S+TTM E PP V P
Sbjct: 729 PGSLRPWRIMGLYTVTPAQSSGAVRSSARPSGTRTT*CSFTTMTSENPPLVGTP 568
Score = 30.9 bits (61), Expect(3) = 9e-030
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 206 PGRLSPPSSPAALASPRTPLLAAATAEL 123
>gb|BM317823.1|BM317823 OV1_16_A02.b9_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 534
Score = 144 bits (310), Expect(2) = 5e-061
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +3 / +3
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNM 884
++T+N +D DGTVT GGYS+ + VHER+ + PDG PL + APLLCAGITVY+PM H +
Sbjct: 261 IFTYNSVDRDGTVTYGGYSSSVTVHERFVVRFPDGMPLDRGAPLLCAGITVYSPMKYHGL 440
Query: 885 NQPGKSLGVIGLGGLGHMAVKFGKA 959
N+PGK +GV+GLGGLGH+AVK KA
Sbjct: 441 NKPGKHVGVLGLGGLGHVAVKLAKA 515
Score = 111 bits (238), Expect(2) = 5e-061
Identities = 40/79 (50%), Positives = 58/79 (73%)
Frame = +3 / +3
Query: 459 DVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGT 638
DV++KI++CG+C++D+ +N+ ++ YP+VPGHEIAGVVT+VG +V F GD VGVG
Sbjct: 12 DVAIKILFCGMCHSDLHSIKNEWGNAMYPMVPGHEIAGVVTEVGKNVTRFNPGDRVGVGC 191
Query: 639 YVNSCRDCENCNISLDNHC 695
VNSC+ C+ C +N C
Sbjct: 192 MVNSCQSCDGCAEGFENTC 248
Score = 67.5 bits (141), Expect(2) = 8e-022
Identities = 38/81 (46%), Positives = 41/81 (50%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q S+ Q S EFT PTPT SP L +T PT VTTPAIS PGT GY F
Sbjct: 247 QVFSKPSAQPSHDWHEFTMQPTPTRSPGLNLVTFLPTSVTTPAISWPGTMGYMALPHSFL 68
Query: 514 VQATSA*QTPQYMIFSETSPL 452
+ S PQ IF TS L
Sbjct: 67 MLCRSEWHIPQNRIFIATSSL 5
Score = 57.9 bits (120), Expect(2) = 8e-022
Identities = 35/81 (43%), Positives = 42/81 (51%)
Frame = -1 / -3
Query: 958 ALPNFTAXXXXXXXXXXPSDFPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLS 779
AL + TA P+ FPG F +G+YTV+PAH GA + G PSG S
Sbjct: 514 ALASLTATWPRPPSPSTPTCFPGLFRPWYFMGLYTVMPAHSSGAPRSSGIPSGNRTTNRS 335
Query: 778 WTTM*VE*PPFVTVPSVSMPL 716
T +E*PP VTVPS S L
Sbjct: 334 CTVTLLE*PP*VTVPSRSTEL 272
>gb|CW251456.1|CW251456 104_714_11223939_116_35066_014 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11223939, DNA
sequence
Length = 749
Score = 174 bits (375), Expect(2) = 9e-061
Identities = 68/75 (90%), Positives = 69/75 (92%)
Frame = +3 / -2
Query: 558 HEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDG 737
HEIAGVVTQVGADVKGFKVGDH GVGTYVNSCRDCENCN SL+NHCPK VYTFNGIDT G
Sbjct: 298 HEIAGVVTQVGADVKGFKVGDHAGVGTYVNSCRDCENCNSSLENHCPKGVYTFNGIDTHG 119
Query: 738 TVTKGGYSTHIVVHE 782
TVT GYSTHIVVHE
Sbjct: 118 TVTMEGYSTHIVVHE 74
Score = 155 bits (333), Expect(2) = 4e-053
Identities = 65/76 (85%), Positives = 67/76 (88%)
Frame = -1 / +3
Query: 784 LSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLK 605
+SWTTM VE*P VTVP VSMPLKV*T FGQW SRE+LQFSQSR EFTYVPTP WSPTL
Sbjct: 72 VSWTTMCVE*PSIVTVPCVSMPLKV*TPFGQWFSRELLQFSQSRHEFTYVPTPAWSPTLN 251
Query: 604 PLTSAPT*VTTPAISC 557
PLTSAPT*VTTPAISC
Sbjct: 252 PLTSAPT*VTTPAISC 299
Score = 147 bits (315), Expect(2) = 3e-048
Identities = 62/76 (81%), Positives = 67/76 (88%)
Frame = -3 / +2
Query: 782 FMDYNVSGVTPLCDSSICINAIESINCFWAMVV*RDIAVLTITARVHICSNTYMVTHFKA 603
FMDYNV GVT CDSS+CINAIESIN FWA+V+*R I VLTI+A VHICSNT MVTHFK+
Sbjct: 74 FMDYNVRGVTLHCDSSMCINAIESINTFWAVVL*RAITVLTISA*VHICSNTSMVTHFKS 253
Query: 602 FDICTNLSYNSSYLMP 555
FDICTNLSYNSS LMP
Sbjct: 254 FDICTNLSYNSSNLMP 301
Score = 105 bits (225), Expect(2) = 6e-035
Identities = 41/50 (82%), Positives = 43/50 (86%)
Frame = -2 / +1
Query: 783 FHGLQCEWSNPPL*QFHLYQCH*KYKLLLGNGCLERYCSSHNHGKSSHMF 634
FHGLQC WSNPPL*QFH+YQCH*KYK LLG+G LE Y SSHN G SSHMF
Sbjct: 73 FHGLQCAWSNPPL*QFHVYQCH*KYKHLLGSGSLESYYSSHNLGMSSHMF 222
Score = 101 bits (216), Expect(2) = 8e-031
Identities = 52/65 (80%), Positives = 53/65 (81%)
Frame = +1 / -3
Query: 589 VQMSKALKWVTM*VLEHM*TLAVIVRTAISL*TTIAQKQFILSMALIQMELSQRGVTPLT 768
VQMSK LKWVTM VLEHM*T A IVRT I+L* T AQK FILSMALI MELSQ VTP T
Sbjct: 267 VQMSKDLKWVTMLVLEHM*THAEIVRTVIAL*RTTAQKVFILSMALIHMELSQWRVTPRT 88
Query: 769 L*SMK 783
L*SMK
Sbjct: 87 L*SMK 73
Score = 83.5 bits (176), Expect(3) = 9e-048
Identities = 29/35 (82%), Positives = 31/35 (88%)
Frame = +2 / -1
Query: 677 LSRQPLPKSSLYFQWH*YRWNCHKGGLLHSHCSP* 781
LSR+PLPK LYFQWH*Y WNCH GGLLH+HCSP*
Sbjct: 179 LSREPLPKRCLYFQWH*YTWNCHNGGLLHAHCSP* 75
Score = 81.3 bits (171), Expect(2) = 9e-061
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +3 / -3
Query: 441 RAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPG 557
RA+Q+ D++ K+IYC VCYADV WTRN LNDSKYPLVPG
Sbjct: 510 RAMQNSDIATKVIYCRVCYADVGWTRNMLNDSKYPLVPG 394
Score = 76.2 bits (160), Expect(3) = 9e-048
Identities = 26/29 (89%), Positives = 27/29 (93%)
Frame = +2 / -1
Query: 557 A*DSWSCNSGWCRCQRL*SG*PCRCWNIC 643
A*D WSCNSGWCRCQR+*SG*PC CWNIC
Sbjct: 299 A*DCWSCNSGWCRCQRI*SG*PCWCWNIC 213
Score = 74.8 bits (157), Expect(2) = 4e-053
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = -3 / +1
Query: 560 MPRNQRIF*IIELIPRPSNVCITDSTVYDLQRNIAALHCS 441
+PRNQRIF*IIE IP P+NV ITDSTVYDL+ NIA LHCS
Sbjct: 391 LPRNQRIF*IIEHIPCPANVSITDSTVYDLRCNIAILHCS 510
Score = 71.2 bits (149), Expect(3) = 9e-048
Identities = 30/40 (75%), Positives = 33/40 (82%)
Frame = +1 / -1
Query: 439 AEQCKAAMFR*RSYTVESVMQTLLGRGISSMIQNILWFLG 558
+EQCK A+ + RSYTVESVM TL G GI SMIQNILWFLG
Sbjct: 512 SEQCKIAILQRRSYTVESVMLTLAGHGICSMIQNILWFLG 393
Score = 67.0 bits (140), Expect(2) = 3e-048
Identities = 29/41 (70%), Positives = 32/41 (78%)
Frame = -1 / +2
Query: 556 PGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRL 434
PGTKGYFESLS+FRVQ TSA*QT QYM F S C AL++
Sbjct: 395 PGTKGYFESLSIFRVQPTSA*QTLQYMTFVAISLFCIALKI 517
Score = 66.1 bits (138), Expect(2) = 6e-035
Identities = 29/38 (76%), Positives = 32/38 (84%)
Frame = -2 / +3
Query: 555 QEPKDILNH*AYSASKQRLHNRLHSI*SSAKHRRFALL 442
QEPKDILNH*AYS S QR HNRL+SI* S ++R FALL
Sbjct: 396 QEPKDILNH*AYSVSSQRQHNRLYSI*PSLQYRYFALL 509
Score = 56.5 bits (117), Expect(2) = 8e-031
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +2 / -2
Query: 440 QSSAKRRCFAEDHILWSLLCRRCLDAE*AQ*FKISFGSW 556
QS+AK R E HIL SLLC R LD E AQ*FKISFGSW
Sbjct: 511 QSNAK*RYCNEGHIL*SLLC*RWLDTEYAQ*FKISFGSW 395
>gb|CF430017.1|CF430017 PH1_25_A07.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_A07_A002 5', mRNA sequence
Length = 781
Score = 89.5 bits (189), Expect(5) = 3e-060
Identities = 32/65 (49%), Positives = 48/65 (73%)
Frame = +3 / +1
Query: 441 RAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGD 620
R ++ GDV++K+++CGVC+ D+ +N+ ++ YP+VPGHE+ GVVT VGA V FK GD
Sbjct: 157 RVLRDGDVTIKVLFCGVCHTDLHIIKNEWGNALYPVVPGHEVVGVVTDVGAGVTKFKAGD 336
Query: 621 HVGVG 635
+ G G
Sbjct: 337 YGGRG 351
Score = 70.7 bits (148), Expect(5) = 3e-060
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +3 / +3
Query: 768 IVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIG 917
+VV + Y ++P P AAPLLCAG+TVY+PM+ + +N PGK LGV+G
Sbjct: 501 LVVDQHYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNVPGKRLGVVG 650
Score = 59.7 bits (124), Expect(5) = 3e-060
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +3 / +2
Query: 624 VGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVT 746
VGVG +++SCR CE+C+ +N+CP V T NG+ DG VT
Sbjct: 341 VGVGYFIDSCRTCESCSTGHENYCPDLVLTSNGVARDGGVT 463
Score = 54.7 bits (113), Expect(5) = 3e-060
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +3 / +1
Query: 891 PGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFST 989
PG + GLGGLGH+AVKFGKAFG+ VTV S+
Sbjct: 625 PGSASASWGLGGLGHIAVKFGKAFGMAVTVISS 723
Score = 34.5 bits (69), Expect(5) = 3e-060
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNR 440
WAARD SG LSP+SF+R
Sbjct: 109 WAARDASGHLSPYSFSR 159
>gb|CN149616.1|CN149616 WOUND1_63_H02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_63_H02_A002 5', mRNA sequence
Length = 764
Score = 129 bits (277), Expect(2) = 6e-060
Identities = 50/107 (46%), Positives = 71/107 (66%)
Frame = +3 / +2
Query: 375 GNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVP 554
G AA D SG L+P + RR+ DV++KI++CG+C++D+ +N+ ++ YP+VP
Sbjct: 209 GKAVGLAAHDASGHLAPLTITRRSTGDDDVAIKILFCGMCHSDLHSIKNEWGNAVYPMVP 388
Query: 555 GHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
GHEIAGVVT+VG +V F GD VGVG VNSC+ C+ C +N C
Sbjct: 389 GHEIAGVVTEVGKNVTRFNPGDRVGVGCMVNSCQSCDGCAEGFENTC 529
Score = 123 bits (263), Expect(2) = 6e-060
Identities = 44/74 (59%), Positives = 58/74 (78%)
Frame = +3 / +2
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNM 884
++T+N +D DGTVT GGYS+ + VHER+ + PDG PL + APLLCAGITVY+PM H +
Sbjct: 542 IFTYNSVDRDGTVTYGGYSSSVTVHERFVVRFPDGMPLDRGAPLLCAGITVYSPMKYHGL 721
Query: 885 NQPGKSLGVIGLGG 926
N+PGK + V+GLGG
Sbjct: 722 NKPGKHVSVLGLGG 763
Score = 85.8 bits (181), Expect(2) = 5e-027
Identities = 47/107 (43%), Positives = 53/107 (49%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q S+ Q S EFT PTPT SP L +T PT VTTPAISCPGT GY F
Sbjct: 528 QVFSKPSAQPSHDWHEFTMQPTPTRSPGLNLVTFLPTSVTTPAISCPGTMGYTALPHSFL 349
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQALQLP 374
+ S PQ IF TS LR+ + G R P+ S AA P
Sbjct: 348 MLCRSEWHIPQNRIFIATSSSPVLLRVMVSGARWPDASCAASPTAFP 208
Score = 57.0 bits (118), Expect(2) = 5e-027
Identities = 30/61 (49%), Positives = 35/61 (57%)
Frame = -1 / -3
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG F +G+YTV+PAH GA + G PSG S T +E*PP VTVPS S
Sbjct: 735 FPGLFRPWYFMGLYTVMPAHSSGAPRSSGIPSGNRTTNRSCTVTLLE*PP*VTVPSRSTE 556
Query: 718 L 716
L
Sbjct: 555 L 553
>gb|CD206268.1|CD206268 HS1_21_G09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_21_G09_A012 5', mRNA sequence
Length = 600
Score = 173 bits (372), Expect(3) = 9e-060
Identities = 70/83 (84%), Positives = 75/83 (90%)
Frame = +3 / +3
Query: 333 STQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAW 512
S+ SSV MAAESENGNC AWAARDPSGVLSP++FNRRAV S DV+LKIIYCGVCYADV W
Sbjct: 351 SSCSSVRMAAESENGNCNAWAARDPSGVLSPYTFNRRAVXSSDVALKIIYCGVCYADVKW 530
Query: 513 TRNKLNDSKYPLVPGHEIAGVVT 581
TRN +DSKYPLVPGHEIAGVVT
Sbjct: 531 TRNMQHDSKYPLVPGHEIAGVVT 599
Score = 150 bits (323), Expect(3) = 5e-051
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = -1 / -3
Query: 580 VTTPAISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGS 401
VTTPAISCPGT+GYFES +FRV TSA*QTPQYMIFS TS LCTALRL + GERTPEGS
Sbjct: 598 VTTPAISCPGTRGYFESCCIFRVHLTSA*QTPQYMIFSATSLLCTALRLNVYGERTPEGS 419
Query: 400 LAAQALQLPFSDSAAM*TEL 341
LAA ALQLPFSDSAA+ TEL
Sbjct: 418 LAAHALQLPFSDSAAIRTEL 359
Score = 144 bits (309), Expect(3) = 1e-043
Identities = 66/80 (82%), Positives = 67/80 (83%)
Frame = -3 / -2
Query: 581 SYNSSYLMPRNQRIF*IIELIPRPSNVCITDSTVYDLQRNIAALHCSAVKTVW*ENSRRI 402
SYNSSYLMP NQRIF*I+ IP P NV ITDSTVYDLQRNIAA HCSAVK VW*ENS RI
Sbjct: 599 SYNSSYLMPWNQRIF*IMLHIPCPFNVSITDSTVYDLQRNIAAXHCSAVKRVW*ENSGRI 420
Query: 401 SRCPSFAVAVL*FSSHVN*T 342
SRCP AVAVL*FS H N*T
Sbjct: 419 SRCPCIAVAVL*FSGHSN*T 360
Score = 133 bits (285), Expect(5) = 7e-039
Identities = 60/73 (82%), Positives = 60/73 (82%)
Frame = +1 / +1
Query: 343 VQFTWLLNQRTATAKLGQREILLEFSHHTVLTAEQCKAAMFR*RSYTVESVMQTLLGRGI 522
VQF W LNQRTATA GQREIL EFSHHT LTAEQC AAM R*RSYTVESVM TL G GI
Sbjct: 361 VQFEWPLNQRTATAMHGQREILPEFSHHTRLTAEQCXAAMLR*RSYTVESVMLTLNGHGI 540
Query: 523 SSMIQNILWFLGM 561
SMIQNILWF GM
Sbjct: 541 CSMIQNILWFQGM 579
Score = 129 bits (276), Expect(2) = 7e-030
Identities = 60/80 (75%), Positives = 65/80 (81%)
Frame = +2 / +2
Query: 341 EFSSHGC*IRERQLQSLGSERSFWSSLTTQF*PQSSAKRRCFAEDHILWSLLCRRCLDAE 520
+FSS+G *IRERQLQ +GSERSF SSLT *PQSSA +RC AEDHILWSLLC R +D E
Sbjct: 359 QFSSNGR*IRERQLQCMGSERSFRSSLTIHV*PQSSAXQRCCAEDHILWSLLC*R*MDTE 538
Query: 521 *AQ*FKISFGSWA*DSWSCN 580
A *FKIS GS A*DSWSCN
Sbjct: 539 YAA*FKISSGSRA*DSWSCN 598
Score = 123 bits (264), Expect(3) = 5e-035
Identities = 55/72 (76%), Positives = 60/72 (83%)
Frame = -2 / -1
Query: 558 AQEPKDILNH*AYSASKQRLHNRLHSI*SSAKHRRFALLCG*NCVVRELQKDLSLPKLCS 379
A EP+DILNH AYS S R HNRLHSI*SSA+HR ALLCG* C+VREL+KDLSLP CS
Sbjct: 576 ALEPEDILNHAAYSVSI*RQHNRLHSI*SSAQHRCXALLCG*TCMVRELRKDLSLPMHCS 397
Query: 378 CRSLIQQPCELN 343
CRSLIQ+P ELN
Sbjct: 396 CRSLIQRPFELN 361
Score = 61.1 bits (127), Expect(3) = 9e-060
Identities = 28/41 (68%), Positives = 29/41 (70%)
Frame = +3 / +2
Query: 228 SLTRYRRLPVSWRHPTACLPRLH*GEFGERPVRKESTQSSV 350
SL R L S PTACLPRLH GEFG+RPVR ESTQ SV
Sbjct: 170 SLAGGRYLQPSDTRPTACLPRLHRGEFGDRPVRTESTQGSV 292
Score = 60.2 bits (125), Expect(3) = 5e-051
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = -1 / -1
Query: 349 TELCVDSFRTGRSPNSPQCKRGKQAVG 269
T+ CVDS RTGRSPNSP+CKRGKQAVG
Sbjct: 291 TDPCVDSVRTGRSPNSPRCKRGKQAVG 211
Score = 45.5 bits (93), Expect(3) = 1e-043
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = -3 / -3
Query: 350 N*TLCRFLPHRPLPELPSMQARQAGC 273
+* L RF PHRP+PEL SMQA QAGC
Sbjct: 292 D*PLRRFRPHRPVPELSSMQAWQAGC 215
Score = 40.0 bits (81), Expect(3) = 5e-035
Identities = 18/25 (72%), Positives = 19/25 (76%)
Frame = -2 / -2
Query: 348 LNSVSIPSAPAAPRTPLNASAASRL 274
L SIPSAPA PRT L+AS ASRL
Sbjct: 290 LTPASIPSAPAGPRTLLDASVASRL 216
Score = 36.8 bits (74), Expect(3) = 9e-060
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +1 / +2
Query: 130 ATLSVPFQSVQRSAEHDTVCALPSNHIF 213
A+ P QS+ RS EHD VCA P++ F
Sbjct: 77 ASAPSPIQSIHRSKEHDPVCAFPTSSPF 160
Score = 32.7 bits (65), Expect(5) = 7e-039
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 204 SHLLPRYKSLTRYRRLPVSWRHPTACL 284
S+ P Y LTR R LP + RHPT L
Sbjct: 142 SNFFPIYNLLTRRRPLPATQRHPTDSL 222
Score = 30.9 bits (61), Expect(3) = 5e-051
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = -3 / -1
Query: 200 LGRAQTVSCSADR*TDWNG 144
+G+AQT SCS DR DW G
Sbjct: 147 VGKAQTGSCSFDRWMDWIG 91
Score = 27.2 bits (53), Expect(3) = 1e-043
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -1 / -2
Query: 199 LEGRRPYHVPLTAERIGMER 140
LE RR H PLT IG+ER
Sbjct: 146 LERRRRDHAPLTGGWIGLER 87
Score = 26.3 bits (51), Expect(5) = 7e-039
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +2 / +3
Query: 164 GQRNMIRSAPFQAI 205
GQR+MI SAPFQ +
Sbjct: 111 GQRSMIPSAPFQLL 152
Score = 25.4 bits (49), Expect(2) = 7e-030
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +2 / +3
Query: 221 L*IAHSLSSATCILATPN 274
L* AHS ++ATC ATP+
Sbjct: 159 L*FAHSPAAATCNPATPD 212
Score = 24.9 bits (48), Expect(5) = 7e-039
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / +3
Query: 271 QQPACRACIE 300
+QPAC ACIE
Sbjct: 213 RQPACHACIE 242
Score = 24.0 bits (46), Expect(3) = 5e-035
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2 / -3
Query: 201 AWKGADRIMFR*P 163
+WKGAD IM *P
Sbjct: 148 SWKGADGIMLL*P 110
Score = 21.7 bits (41), Expect(5) = 7e-039
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / +2
Query: 50 NSWLARGP 73
NSWLAR P
Sbjct: 29 NSWLARSP 52
>gb|CN145955.1|CN145955 WOUND1_36_A11.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_36_A11_A002 5', mRNA sequence
Length = 760
Score = 128 bits (274), Expect(2) = 2e-059
Identities = 49/107 (45%), Positives = 70/107 (65%)
Frame = +3 / +2
Query: 375 GNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVP 554
G AA D SG L+P + RR+ DV++KI++CG+C++D+ +N+ ++ YP+VP
Sbjct: 209 GKAVGLAAHDASGHLAPLTITRRSTGDDDVAIKILFCGMCHSDLHSIKNEWGNAMYPMVP 388
Query: 555 GHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
GHEIAGV T+VG +V F GD VGVG VNSC+ C+ C +N C
Sbjct: 389 GHEIAGVATEVGKNVTRFNPGDRVGVGCMVNSCQSCDGCAEGFENTC 529
Score = 123 bits (263), Expect(2) = 2e-059
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +3 / +2
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNM 884
++T+N +D DGTVT GGYS+ + VHER+ + PDG PL + APLLCAGITVY+PM H +
Sbjct: 542 IFTYNSVDRDGTVTYGGYSSSVTVHERFVVRFPDGMPLDRGAPLLCAGITVYSPMKYHGL 721
Query: 885 NQPGKSLGVIGLG 923
N+PGK +GV+GLG
Sbjct: 722 NKPGKHVGVLGLG 760
Score = 79.4 bits (167), Expect(2) = 4e-025
Identities = 45/107 (42%), Positives = 51/107 (47%)
Frame = -1 / -2
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q S+ Q S EFT PTPT SP L +T PT V TPAIS PGT GY F
Sbjct: 528 QVFSKPSAQPSHDWHEFTMQPTPTRSPGLNLVTFLPTSVATPAISWPGTMGYMALPHSFL 349
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQALQLP 374
+ S PQ IF TS LR+ + G R P+ S AA P
Sbjct: 348 MLCRSEWHIPQNRIFIATSSSPVLLRVMVSGARWPDASCAASPTAFP 208
Score = 57.0 bits (118), Expect(2) = 4e-025
Identities = 30/61 (49%), Positives = 35/61 (57%)
Frame = -1 / -2
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG F +G+YTV+PAH GA + G PSG S T +E*PP VTVPS S
Sbjct: 735 FPGLFRPWYFMGLYTVMPAHSSGAPRSSGIPSGNRTTNRSCTVTLLE*PP*VTVPSRSTE 556
Query: 718 L 716
L
Sbjct: 555 L 553
>gb|CN134469.1|CN134469 OX1_26_C04.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_C04_A002 5', mRNA sequence
Length = 735
Score = 141 bits (303), Expect(3) = 1e-057
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / +1
Query: 441 RAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGD 620
R ++ GDV++K+++CGVC+ D+ +N+ ++ YP+VPGHE+ GVVT VGA V FK GD
Sbjct: 235 RVLRDGDVTIKVLFCGVCHTDLHIIKNEWGNALYPVVPGHEVVGVVTDVGAGVTKFKAGD 414
Query: 621 HVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVT 746
VGVG +++SCR CE+C+ +N+CP V T NG+ DG VT
Sbjct: 415 TVGVGYFIDSCRTCESCSTGHENYCPDLVLTSNGVARDGGVT 540
Score = 89.5 bits (189), Expect(3) = 2e-024
Identities = 48/97 (49%), Positives = 53/97 (54%)
Frame = -1 / -2
Query: 745 VTVPSVSMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPA 566
VT PS + PL+V T GQ S +LQ SQ R E PTPT SP L +T APT VTTP
Sbjct: 539 VTPPSRATPLEVRTRSGQ*FSCPVLQLSQVRHESMK*PTPTVSPALNLVTPAPTSVTTPT 360
Query: 565 ISCPGTKGYFESLSLFRVQATSA*QTPQYMIFSETSP 455
SCPGT GY F + S QTPQ TSP
Sbjct: 359 TSCPGTTGYSALPHSFLMMWRSVWQTPQKSTLIVTSP 249
Score = 87.7 bits (185), Expect(3) = 1e-057
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +3 / +1
Query: 729 TDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLG 908
T T T+GG+S +VV + Y ++P P AAPLLCAG+TVY+PM+ + +N PGK LG
Sbjct: 538 TTTTTTQGGFSDVVVVDQHYVVRVPASLPPDGAAPLLCAGVTVYSPMVEYGLNVPGKRLG 717
Query: 909 VIGLGG 926
V+ LGG
Sbjct: 718 VVRLGG 735
Score = 37.7 bits (76), Expect(3) = 2e-024
Identities = 24/60 (40%), Positives = 29/60 (48%)
Frame = -1 / -2
Query: 898 FPGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMP 719
FPG +G+YTV PA GAA + G +G L TT E PP V V V+ P
Sbjct: 707 FPGTLRPYSTMGLYTVTPAQSSGAAPSGGRLAGTLTT*CWSTTTTSEKPPCVVVVVVTPP 528
Score = 34.5 bits (69), Expect(3) = 1e-057
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNR 440
WAARD SG LSP+SF+R
Sbjct: 187 WAARDASGHLSPYSFSR 237
Score = 24.9 bits (48), Expect(3) = 2e-024
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -2
Query: 433 KLCGERTPEGSLAA 392
KL GER PE SLAA
Sbjct: 230 KL*GERCPEASLAA 189
>gb|CN148779.1|CN148779 WOUND1_58_F02.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_58_F02_A002 5', mRNA sequence
Length = 797
Score = 157 bits (337), Expect(2) = 3e-056
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 167 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 346
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 347 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 505
Score = 95.5 bits (202), Expect(3) = 6e-030
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -3
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 504 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 325
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 324 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 169
Score = 83.5 bits (176), Expect(2) = 3e-056
Identities = 31/52 (59%), Positives = 40/52 (76%)
Frame = +3 / +2
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQ 890
G TKGG+S IVV+E Y ++PDG L + APLLCAG+TVY+PMMRH +N+
Sbjct: 518 GVPTKGGFSDVIVVNEHYVVRVPDGLALDRTAPLLCAGVTVYSPMMRHGLNE 673
Score = 44.1 bits (90), Expect(3) = 6e-030
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 874 RIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
RI+G+YTV PA GA + PSG S+TTM E PP V P
Sbjct: 657 RIMGLYTVTPAQSSGAVRSSARPSGTRTT*CSFTTMTSENPPLVGTP 517
Score = 30.9 bits (61), Expect(3) = 6e-030
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 155 PGRLSPPSSPAALASPRTPLLAAATAEL 72
>gb|CX622583.1|CX622583 GABR1_64_G03.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_64_G03_A002 5', mRNA sequence
Length = 770
Score = 157 bits (337), Expect(2) = 6e-056
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 266 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 445
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 446 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 604
Score = 95.5 bits (202), Expect(3) = 6e-030
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -3
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 603 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 424
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 423 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 268
Score = 82.6 bits (174), Expect(2) = 6e-056
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +3 / +2
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMN 887
G TKGG+S IVV+E Y ++PDG L + APLLCAG+TVY+PMMRH +N
Sbjct: 617 GVPTKGGFSDVIVVNEHYVVRVPDGLALDRTAPLLCAGVTVYSPMMRHGLN 769
Score = 44.1 bits (90), Expect(3) = 6e-030
Identities = 22/47 (46%), Positives = 26/47 (55%)
Frame = -1 / -3
Query: 874 RIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
RI+G+YTV PA GA + PSG S+TTM E PP V P
Sbjct: 756 RIMGLYTVTPAQSSGAVRSSARPSGTRTT*CSFTTMTSENPPLVGTP 616
Score = 30.9 bits (61), Expect(3) = 6e-030
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 254 PGRLSPPSSPAALASPRTPLLAAATAEL 171
>gb|CD224850.1|CD224850 CCC1_36_A05.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_36_A05_A007 5', mRNA sequence
Length = 620
Score = 162 bits (348), Expect(2) = 6e-056
Identities = 61/125 (48%), Positives = 84/125 (67%)
Frame = +3 / +1
Query: 354 MAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLND 533
M E WAARD SG LSP+SF+ R GDV++K+++CG+C+ D+ +N+ +
Sbjct: 64 MEMEQGGKTAHGWAARDASGHLSPYSFSARVQGDGDVTIKVLFCGICHTDLHVIKNEWGN 243
Query: 534 SKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYT 713
+ YP+VPGHE+ GVVT VG V FK GD VGVG +V+SCR CE+C+ +N+CP V T
Sbjct: 244 AMYPVVPGHEVVGVVTDVGHGVTKFKAGDTVGVGYFVDSCRTCESCSTGHENYCPDLVLT 423
Query: 714 FNGID 728
NG+D
Sbjct: 424 SNGVD 438
Score = 100 bits (214), Expect(2) = 4e-025
Identities = 57/112 (50%), Positives = 61/112 (54%)
Frame = -1 / -1
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T GQ S +LQ SQ RQE T PTPT SP L +T PT VTTP SCPGT
Sbjct: 437 STPLEVRTRSGQ*FSCPVLQLSQVRQESTK*PTPTVSPALNLVTPWPTSVTTPTTSCPGT 258
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TSP L KL GER PE SLAA
Sbjct: 257 TGYMALPHSFLMTWRSVWQMPQKSTLIVTSPSP*TLAEKL*GERWPEASLAA 102
Score = 77.6 bits (163), Expect(2) = 6e-056
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3 / +1
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGK 899
G TKGG+S +VV + + ++P+ PL AAPLLCAG+TVY+PM ++ +N+PGK
Sbjct: 451 GATTKGGFSDVLVVSQDFVVRVPESLPLDGAAPLLCAGVTVYSPMAQYALNEPGK 615
Score = 35.4 bits (71), Expect(2) = 4e-025
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -1 / -1
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG +G+YTV PA GAA ++G SG TT E PP V P
Sbjct: 611 PGSLSAYCAMGLYTVTPAQSSGAAPSRGRLSGTRTTKSWLTTSTSEKPPLVVAP 450
>gb|CD227138.1|CD227138 CCC1_4_B10.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_4_B10_A007 5', mRNA sequence
Length = 602
Score = 219 bits (472), Expect = 7e-056
Identities = 84/167 (50%), Positives = 115/167 (68%)
Frame = +3 / +3
Query: 360 AESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSK 539
AE A AA D SG +SP +RR DV+++I+YCG+C++D+ +N+ ++
Sbjct: 99 AEQHPRTALALAAHDASGRVSPIRISRRDTGDDDVAIQILYCGICHSDLHTIKNEWKNAN 278
Query: 540 YPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFN 719
YP+VPGHEIAG++T+VG + K F VGD VGVG VN+C+ CE+C +NHC K ++ +N
Sbjct: 279 YPVVPGHEIAGLITEVGKNAKKFNVGDKVGVGCMVNTCQSCESCEEGHENHCSKIIFAYN 458
Query: 720 GIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVY 860
D DGT+T GGYS +VV+ER+ + PDG PL K APLLCAGITVY
Sbjct: 459 SHDRDGTITYGGYSDMVVVNERFVIRFPDGVPLDKGAPLLCAGITVY 599
Score = 125 bits (268), Expect = 9e-028
Identities = 72/159 (45%), Positives = 80/159 (50%)
Frame = -1 / -2
Query: 862 VYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLS 683
+YTVIPA GA ++G PSG L S+TT E*PP V VPS+S L QW S
Sbjct: 601 LYTVIPAQSSGAPLSRGTPSGNLMTKRSFTTTMSE*PP*VMVPSLSWEL*AKMILEQWFS 422
Query: 682 REILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQAT 503
Q SQ Q T PTPT SPTL PT V +PAISCPGT G F +
Sbjct: 421 CPSSQLSQDWQVLTMHPTPTLSPTLNFFAFLPTSVISPAISCPGTTG*LAFFHSFLMVCR 242
Query: 502 SA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQA 386
S PQY I TS +LR GE PE S AA A
Sbjct: 241 SEWHIPQYSICMATSSSPVSLREMRMGETRPEASCAASA 125
>gb|BG053707.1|BG053707 RHIZ2_8_G08.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 552
Score = 218 bits (470), Expect = 1e-055
Identities = 80/180 (44%), Positives = 122/180 (67%)
Frame = +3 / +3
Query: 408 SGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQV 587
+G LSP+++ R DV +K++YCG+C+ D+ +N L SKYP+VPGHE+ G V +V
Sbjct: 12 TGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEV 191
Query: 588 GADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTH 767
G +V + VGD VGVG V CR+C C +++ +C K ++++N + TDG T+GG+++
Sbjct: 192 GPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFAST 371
Query: 768 IVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVK 947
+VV +++ KIP G +AAPLLCAG+TVY+P+ + PG G++GLGG+GHM VK
Sbjct: 372 MVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTAPGLRGGIVGLGGVGHMGVK 551
Score = 82.2 bits (173), Expect(2) = 3e-021
Identities = 45/95 (47%), Positives = 51/95 (53%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S LQ SRQ T PTPT SPT LTS PT T+P SCPGT GYFE+ F
Sbjct: 298 QYCSTLALQGLHSRQHPTITPTPTTSPTPYLLTSGPTSTTSPTTSCPGTMGYFEAPRWFL 119
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTP 410
S Q PQ F+ TS LR+ + GER P
Sbjct: 118 AWWMSVWQIPQ*STFTTTSSGPVFLRV*V*GERCP 14
Score = 41.4 bits (84), Expect(2) = 3e-021
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1 / -3
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V PSV
Sbjct: 469 GLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEAKPPCVGRPSV 332
>gb|BM324190.1|BM324190 PIC1_25_D10.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 512
Score = 135 bits (290), Expect(2) = 3e-055
Identities = 49/103 (47%), Positives = 71/103 (68%)
Frame = +3 / +2
Query: 420 SPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADV 599
+P++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI GVVT VG V
Sbjct: 8 APYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIVGVVTGVGGGV 187
Query: 600 KGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 188 TRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 316
Score = 101 bits (216), Expect(2) = 3e-055
Identities = 38/61 (62%), Positives = 48/61 (78%)
Frame = +3 / +2
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
G TKGG+S IVV+E Y ++PDG L + APLLCAG+TVY+PMMRH +N+PGK LGV+
Sbjct: 329 GVPTKGGFSDVIVVNEHYVVRVPDGLALDRTAPLLCAGVTVYSPMMRHGLNEPGKHLGVV 508
Query: 915 G 917
G
Sbjct: 509 G 511
Score = 79.0 bits (166), Expect(2) = 1e-021
Identities = 47/102 (46%), Positives = 51/102 (50%)
Frame = -1 / -3
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 315 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 136
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCG 422
GY F + S Q PQ TS L KL G
Sbjct: 135 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*G 10
Score = 46.0 bits (94), Expect(2) = 1e-021
Identities = 24/54 (44%), Positives = 28/54 (51%)
Frame = -1 / -3
Query: 895 PGWFMLCRIIGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PG RI+G+YTV PA GA + PSG S+TTM E PP V P
Sbjct: 489 PGSLRPWRIMGLYTVTPAQSSGAVRSSARPSGTRTT*CSFTTMTSENPPLVGTP 328
>gb|CW310290.1|CW310290 104_799_11469637_148_35749_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469637, DNA
sequence
Length = 671
Score = 144 bits (310), Expect(3) = 5e-055
Identities = 53/85 (62%), Positives = 68/85 (80%)
Frame = +3 / -1
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNM 884
++T+N +D DGTVT GGYS+ + VHER+ + PDG PL + APLLCAGITVY+PM H +
Sbjct: 464 IFTYNSVDRDGTVTYGGYSSSVTVHERFVVRFPDGMPLDRGAPLLCAGITVYSPMKYHGL 285
Query: 885 NQPGKSLGVIGLGGLGHMAVKFGKA 959
N+PGK +GV+GLGGLGH+AVK KA
Sbjct: 284 NKPGKHVGVLGLGGLGHVAVKLAKA 210
Score = 86.8 bits (183), Expect(3) = 5e-055
Identities = 33/65 (50%), Positives = 44/65 (67%)
Frame = +3 / -1
Query: 501 DVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNIS 680
D+ +N+ ++ YP+VPGHEIAGVVT+VG +V F GD VGVG VNSC+ C+ C
Sbjct: 671 DLHSIKNEWGNAMYPMVPGHEIAGVVTEVGKNVTRFNPGDRVGVGCMVNSCQSCDGCAEG 492
Query: 681 LDNHC 695
+N C
Sbjct: 491 FENTC 477
Score = 23.5 bits (45), Expect(3) = 5e-055
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +3 / -1
Query: 957 AFGLKVTVFST 989
AFG+KVTV ST
Sbjct: 209 AFGMKVTVIST 177
>gb|CD225143.1|CD225143 CCC1_38_B06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_38_B06_A007 5', mRNA sequence
Length = 686
Score = 215 bits (465), Expect = 6e-055
Identities = 83/167 (49%), Positives = 114/167 (68%)
Frame = +3 / +2
Query: 360 AESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSK 539
AE A AA D SG +SP +RR DV+++I+YCG+C++D+ +N+ ++
Sbjct: 182 AEQHPRTALALAAHDASGRVSPIRISRRDTGDDDVAIQILYCGICHSDLHTIKNEWKNAN 361
Query: 540 YPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFN 719
YP+VPGHEIAG++T+VG + K F VGD VGVG VN+C+ CE+C +NHC K ++ +
Sbjct: 362 YPVVPGHEIAGLITEVGKNAKKFNVGDKVGVGCMVNTCQSCESCEEGHENHCSKIIFAYX 541
Query: 720 GIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVY 860
D DGT+T GGYS +VV+ER+ + PDG PL K APLLCAGITVY
Sbjct: 542 SHDRDGTITYGGYSDMVVVNERFVIRFPDGVPLDKGAPLLCAGITVY 682
Score = 83.1 bits (175), Expect(2) = 4e-024
Identities = 46/103 (44%), Positives = 49/103 (47%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
QW S Q SQ Q T PTPT SPTL PT V +PAISCPGT G F
Sbjct: 516 QWFSCPSSQLSQDWQVLTMHPTPTLSPTLNFFAFLPTSVISPAISCPGTTG*LAFFHSFL 337
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQA 386
+ S PQY I TS +LR GE PE S AA A
Sbjct: 336 MVCRSEWHIPQYSICMATSSSPVSLREMRMGETRPEASCAASA 208
Score = 50.1 bits (103), Expect(2) = 4e-024
Identities = 25/46 (54%), Positives = 30/46 (65%)
Frame = -1 / -3
Query: 862 VYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVS 725
+YTVIPA GA ++G PSG L S+TT E*PP V VPS+S
Sbjct: 684 LYTVIPAQSSGAPLSRGTPSGNLMTKRSFTTTMSE*PP*VMVPSLS 547
>gb|CD203896.1|CD203896 HS1_2_H07.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone
HS1_2_H07_A012 5', mRNA sequence
Length = 619
Score = 211 bits (455), Expect = 2e-053
Identities = 81/163 (49%), Positives = 112/163 (68%)
Frame = +3 / +2
Query: 360 AESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSK 539
AE A AA D SG +SP +RR DV+++I+YCG+C++D+ +N+ ++
Sbjct: 131 AEQHPRTTLALAAHDASGRVSPIRISRRDTGDDDVAIQILYCGICHSDLHTIKNEWKNAN 310
Query: 540 YPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFN 719
YP+VPGHEIAG++T+VG +VK F VGD VGVG VN+C+ CE+C +NHC K ++ +N
Sbjct: 311 YPVVPGHEIAGLITEVGKNVKKFNVGDKVGVGCMVNTCQSCESCEEGHENHCSKIIFAYN 490
Query: 720 GIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAG 848
D DGT+T GGYS +VV+ER+ + PDG PL K APLLCAG
Sbjct: 491 SHDRDGTITYGGYSDMVVVNERFVIRFPDGVPLDKGAPLLCAG 619
Score = 118 bits (252), Expect = 2e-025
Identities = 69/154 (44%), Positives = 76/154 (49%)
Frame = -1 / -2
Query: 847 PAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPLKV*TAFGQWLSREILQ 668
PA GA ++G PSG L S+TT E*PP V VPS+S L QW S Q
Sbjct: 618 PAQSSGAPLSRGTPSGNLMTKRSFTTTMSE*PP*VMVPSLSWEL*AKMILEQWFSCPSSQ 439
Query: 667 FSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFRVQATSA*QT 488
SQ Q T PTPT SPTL T PT V +PAISCPGT G F + S
Sbjct: 438 LSQDWQVLTMHPTPTLSPTLNFFTFLPTSVISPAISCPGTTG*LAFFHSFLMVCRSEWHI 259
Query: 487 PQYMIFSETSPLCTALRLKLCGERTPEGSLAAQA 386
PQY I TS +LR GE PE S AA A
Sbjct: 258 PQYSICMATSSSPVSLREMRMGETRPEASCAASA 157
>gb|CN140627.1|CN140627 OX1_45_C11.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_45_C11_A002 5', mRNA sequence
Length = 709
Score = 206 bits (445), Expect = 4e-052
Identities = 78/187 (41%), Positives = 119/187 (63%)
Frame = +3 / +3
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
+QS M + + WAARD +G LSP+++ R DV +K++YCG+C+ D+
Sbjct: 147 SQSKRRMGSLASERKVVGWAARDATGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQA 326
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C C +++ +C
Sbjct: 327 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYC 506
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMR 875
K +++ N + TDG T+GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+
Sbjct: 507 NKKIWSHNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKA 686
Query: 876 HNMNQPG 896
+ PG
Sbjct: 687 FGLTAPG 707
Score = 90.0 bits (190), Expect(2) = 1e-023
Identities = 50/102 (49%), Positives = 56/102 (54%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S LQ SRQ T PTPT SPT LTS PT T+P SCPGT GYFE+ F
Sbjct: 505 QYCSTLALQGLHSRQHPTITPTPTTSPTPYLLTSGPTSTTSPTTSCPGTIGYFEAPRWFL 326
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
S Q PQ F+ TS LR+ + GER P SLAAQ
Sbjct: 325 AWWMSVWQIPQ*STFTTTSSGPVFLRV*V*GERCPVASLAAQ 200
Score = 41.4 bits (84), Expect(2) = 1e-023
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1 / -1
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V PSV
Sbjct: 676 GLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEAKPPCVGRPSV 539
>gb|BE358051.1|BE358051 DG1_24_F08.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 205 bits (442), Expect = 9e-052
Identities = 77/168 (45%), Positives = 113/168 (67%)
Frame = +3 / +2
Query: 486 GVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCE 665
G+C+ D+ +N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C
Sbjct: 11 GICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECS 190
Query: 666 NCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCA 845
C +++ +C K ++++N + TDG T+GG+++ +VV +++ KIP G +AAPLLCA
Sbjct: 191 PCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCA 370
Query: 846 GITVYTPMMRHNMNQPGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFST 989
G+TVY+P+ + PG G++GLGG+GHM VK KA G VTV S+
Sbjct: 371 GVTVYSPLKAFGLTAPGLRGGIVGLGGVGHMGVKVAKAMGHHVTVISS 514
>gb|CD431402.1|CD431402 ETH1_8_D11.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_8_D11_A002 5', mRNA sequence
Length = 737
Score = 204 bits (440), Expect = 2e-051
Identities = 78/192 (40%), Positives = 121/192 (63%)
Frame = +3 / +2
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
+QS M + + WAARD +G LSP+++ R DV +K++YCG+C+ D+
Sbjct: 161 SQSKRRMGSLASERKVVGWAARDATGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQA 340
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C C +++ +C
Sbjct: 341 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYC 520
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMR 875
K ++++N + TDG T+GG+++ +VV +++ KIP G +AAPLL AG+TVY+P+
Sbjct: 521 NKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLYAGVTVYSPLKA 700
Query: 876 HNMNQPGKSLGV 911
+ PG G+
Sbjct: 701 FGLTAPGLRGGI 736
Score = 90.0 bits (190), Expect(2) = 9e-023
Identities = 50/102 (49%), Positives = 56/102 (54%)
Frame = -1 / -3
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S LQ SRQ T PTPT SPT LTS PT T+P SCPGT GYFE+ F
Sbjct: 519 QYCSTLALQGLHSRQHPTITPTPTTSPTPYLLTSGPTSTTSPTTSCPGTIGYFEAPRWFL 340
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
S Q PQ F+ TS LR+ + GER P SLAAQ
Sbjct: 339 AWWMSVWQIPQ*STFTTTSSGPVFLRV*V*GERCPVASLAAQ 214
Score = 38.6 bits (78), Expect(2) = 9e-023
Identities = 21/46 (45%), Positives = 25/46 (54%)
Frame = -1 / -3
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PA+ GAA + P+GI TTM PP V PSV
Sbjct: 690 GLYTVTPAYSSGAACSGARPAGIFTTNFWSTTMVEAKPPCVGRPSV 553
>gb|CF487897.1|CF487897 POL1_46_C06.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_46_C06_A002 5', mRNA sequence
Length = 723
Score = 130 bits (278), Expect(2) = 3e-051
Identities = 50/107 (46%), Positives = 71/107 (66%)
Frame = +3 / +1
Query: 375 GNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVP 554
G AA D SG L+P + RR+ DV++KI++CG+C++D+ +N+ ++ YP+VP
Sbjct: 223 GKAVGLAAHDASGHLAPLTITRRSTGDDDVAIKILFCGMCHSDLHSIKNEWGNAMYPMVP 402
Query: 555 GHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
GHEIAGVVT+VG +V F GD VGVG VNSC+ C+ C +N C
Sbjct: 403 GHEIAGVVTEVGKNVTRFNPGDRVGVGCMVNSCQSCDGCAEGFENTC 543
Score = 93.6 bits (198), Expect(2) = 3e-051
Identities = 34/55 (61%), Positives = 43/55 (78%)
Frame = +3 / +1
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPM 869
++T+N +D DGTVT GGYS+ + VHER + PDG PL + APLLCAGITVY+PM
Sbjct: 556 IFTYNSVDRDGTVTYGGYSSSVTVHERSVVRFPDGMPLDRGAPLLCAGITVYSPM 720
Score = 81.7 bits (172), Expect(2) = 1e-023
Identities = 46/107 (42%), Positives = 52/107 (48%)
Frame = -1 / -2
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q S+ Q S EFT PTPT SP L +T PT VTTPAIS PGT GY F
Sbjct: 542 QVFSKPSAQPSHDWHEFTMQPTPTRSPGLNLVTFLPTSVTTPAISWPGTMGYMALPHSFL 363
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQALQLP 374
+ S PQ IF TS LR+ + G R P+ S AA P
Sbjct: 362 MLCRSEWHIPQNRIFIATSSSPVLLRVMVSGARWPDASCAASPTAFP 222
Score = 49.6 bits (102), Expect(2) = 1e-023
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = -1 / -2
Query: 868 IGVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSVSMPL 716
+G+YTV+PAH GA + G PSG S T +E*PP VTVPS S L
Sbjct: 719 MGLYTVMPAHSSGAPRSSGIPSGNRTTDRSCTVTLLE*PP*VTVPSRSTEL 567
>gb|CD430247.1|CD430247 ETH1_17_H05.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_17_H05_A002 5', mRNA sequence
Length = 696
Score = 202 bits (436), Expect = 6e-051
Identities = 76/177 (42%), Positives = 116/177 (65%)
Frame = +3 / +2
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
+QS M + + WAARD +G LSP+++ R DV +K++YCG+C+ D+
Sbjct: 164 SQSKRRMGSLASERKVVGWAARDATGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQA 343
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C C +++ +C
Sbjct: 344 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYC 523
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTP 866
K ++++N + TDG T+GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P
Sbjct: 524 NKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSP 694
Score = 90.0 bits (190), Expect(2) = 1e-023
Identities = 50/102 (49%), Positives = 56/102 (54%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S LQ SRQ T PTPT SPT LTS PT T+P SCPGT GYFE+ F
Sbjct: 522 QYCSTLALQGLHSRQHPTITPTPTTSPTPYLLTSGPTSTTSPTTSCPGTIGYFEAPRWFL 343
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAAQ 389
S Q PQ F+ TS LR+ + GER P SLAAQ
Sbjct: 342 AWWMSVWQIPQ*STFTTTSSGPVFLRV*V*GERCPVASLAAQ 217
Score = 41.4 bits (84), Expect(2) = 1e-023
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1 / -1
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V PSV
Sbjct: 693 GLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEAKPPCVGRPSV 556
>gb|CW027560.1|CW027560 104_254_10498588_114_30395 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10498588, DNA
sequence
Length = 827
Score = 132 bits (283), Expect(2) = 3e-049
Identities = 51/85 (60%), Positives = 67/85 (78%)
Frame = +3 / +1
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
G TKGG+S +VV + + ++P+ PL AAPLLCAG+TVY+PM ++ +N+PGK LGV+
Sbjct: 208 GATTKGGFSDVLVVSQDFVVRVPESLPLDGAAPLLCAGVTVYSPMAQYALNEPGKHLGVV 387
Query: 915 GLGGLGHMAVKFGKAFGLKVTVFST 989
GLGGLGHMAVKF KAFG+ VTV S+
Sbjct: 388 GLGGLGHMAVKFAKAFGMTVTVISS 462
Score = 84.9 bits (179), Expect(2) = 3e-049
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +3 / +1
Query: 558 HEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
HE+ GVVT VG V FK GD VGVG +V+SCR CE+C+ +N+CP V T NG+D
Sbjct: 25 HEVVGVVTDVGHGVTKFKAGDTVGVGYFVDSCRTCESCSTGHENYCPDLVLTSNGVD 195
>gb|CF431166.1|CF431166 NIT1_6_H05.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_6_H05_A002 5', mRNA sequence
Length = 565
Score = 195 bits (421), Expect = 7e-049
Identities = 72/177 (40%), Positives = 115/177 (64%)
Frame = +3 / +3
Query: 384 KAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHE 563
+A + P+G LSP+++ R DV +K++YCG+C+ D+ +N L SKYP+VPGHE
Sbjct: 33 RARPSPSPTGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHE 212
Query: 564 IAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTV 743
+ G V +VG +V + VGD VGVG V CR+C C +++ +C K ++++ + TDG
Sbjct: 213 VVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYKDVYTDGRP 392
Query: 744 TKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLGVI 914
T+GG+++ +VV +++ KIP G +AAPLLCAG+TVY+P+ + PG G++
Sbjct: 393 TQGGFASTMVVDQKFVVKIPAGLAPEQAAPLLCAGVTVYSPLKAFGLTAPGLRGGIV 563
Score = 83.1 bits (175), Expect(2) = 1e-021
Identities = 46/97 (47%), Positives = 52/97 (53%)
Frame = -1 / -1
Query: 694 QWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGTKGYFESLSLFR 515
Q+ S LQ SRQ T PTPT SPT LTS PT T+P SCPGT GYFE+ F
Sbjct: 343 QYCSTLALQGLHSRQHPTITPTPTTSPTPYLLTSGPTSTTSPTTSCPGTIGYFEAPRWFL 164
Query: 514 VQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEG 404
S Q PQ F+ TS LR+ + GER P G
Sbjct: 163 AWWMSVWQIPQ*STFTTTSSGPVFLRV*V*GERCPVG 53
Score = 41.4 bits (84), Expect(2) = 1e-021
Identities = 22/46 (47%), Positives = 25/46 (54%)
Frame = -1 / -1
Query: 865 GVYTVIPAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVPSV 728
G+YTV PAH GAA + P+GI TTM PP V PSV
Sbjct: 514 GLYTVTPAHSSGAACSGARPAGIFTTNFWSTTMVEAKPPCVGRPSV 377
>gb|CN143200.1|CN143200 WOUND1_14_E12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_14_E12_A002 5', mRNA sequence
Length = 694
Score = 157 bits (337), Expect(2) = 5e-048
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 228 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 407
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 408 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 566
Score = 95.5 bits (202), Expect(3) = 1e-025
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -1
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 565 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 386
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 385 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 230
Score = 56.1 bits (116), Expect(2) = 5e-048
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAG 848
G TKGG+S IVV+E Y ++PDG L + APLLCAG
Sbjct: 579 GVPTKGGFSDVIVVNEHYVVRVPDGLALDRTAPLLCAG 692
Score = 30.9 bits (61), Expect(3) = 1e-025
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -2
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 216 PGRLSPPSSPAALASPRTPLLAAATAEL 133
Score = 29.5 bits (58), Expect(3) = 1e-025
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = -1 / -1
Query: 847 PAHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
PA GA + PSG S+TTM E PP V P
Sbjct: 691 PAQSSGAVRSSARPSGTRTT*CSFTTMTSENPPLVGTP 578
>gb|CX620279.1|CX620279 GABR1_50_H04.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_50_H04_A002 5', mRNA sequence
Length = 550
Score = 189 bits (408), Expect = 5e-047
Identities = 68/154 (44%), Positives = 105/154 (68%)
Frame = +3 / +1
Query: 459 DVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGT 638
DV +K++YCG+C+ D+ +N L SKYP+VPGHE+ G V +VG +V + VGD VGVG
Sbjct: 88 DVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGV 267
Query: 639 YVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPL 818
V CR+C C +++ +C K ++++N + TDG T+GG+++ +VV +++ KIP G
Sbjct: 268 IVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAP 447
Query: 819 AKAAPLLCAGITVYTPMMRHNMNQPGKSLGVIGL 920
+AAPLLCAG+TVY+P+ + PG G++GL
Sbjct: 448 EQAAPLLCAGVTVYSPLKAFGLTAPGLRGGIVGL 549
>gb|CW406041.1|CW406041 fsbb001f098n24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f098n24, DNA
sequence
Length = 547
Score = 84.9 bits (179), Expect(3) = 8e-047
Identities = 32/58 (55%), Positives = 43/58 (74%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGKSLG 908
G TKGG+S IVV+E Y ++PDG L + APLLCAG+TVY+PMMRH +N+ ++ G
Sbjct: 306 GVPTKGGFSDVIVVNEHYVVRVPDGLALDRTAPLLCAGVTVYSPMMRHGLNETRQASG 479
Score = 79.0 bits (166), Expect(3) = 8e-047
Identities = 31/57 (54%), Positives = 37/57 (64%)
Frame = +3 / +3
Query: 558 HEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
HEI GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 123 HEIVGVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 293
Score = 63.8 bits (133), Expect(3) = 8e-047
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = +3 / +1
Query: 888 QPGKSLGVIGLGGLGHMAVKFGKAFGLKV 974
+PGK LGV+GLGGLGH+AVKFGKAFG+KV
Sbjct: 460 RPGKHLGVVGLGGLGHVAVKFGKAFGMKV 546
>gb|CD230053.1|CD230053 SS1_40_H11.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_H11_A012 5', mRNA sequence
Length = 699
Score = 157 bits (337), Expect(2) = 3e-046
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 237 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 416
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 417 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 575
Score = 95.5 bits (202), Expect(3) = 5e-024
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -3
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 574 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 395
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 394 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 239
Score = 50.1 bits (103), Expect(2) = 3e-046
Identities = 20/37 (54%), Positives = 25/37 (67%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCA 845
G TKGG+S IVV+E Y ++P G L + APLLCA
Sbjct: 588 GVPTKGGFSDVIVVNEHYVVRVPGGLALDRTAPLLCA 698
Score = 30.9 bits (61), Expect(3) = 5e-024
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 225 PGRLSPPSSPAALASPRTPLLAAATAEL 142
Score = 24.0 bits (46), Expect(3) = 5e-024
Identities = 14/37 (37%), Positives = 16/37 (43%)
Frame = -1 / -3
Query: 844 AHRRGAAFAKG*PSGILKQYLSWTTM*VE*PPFVTVP 734
A GA + P G S+TTM E PP V P
Sbjct: 697 AQSSGAVRSSARPPGTRTT*CSFTTMTSENPPLVGTP 587
>gb|CW391631.1|CW391631 fsbb001f077n22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f077n22, DNA
sequence
Length = 704
Score = 113 bits (241), Expect(2) = 4e-046
Identities = 41/85 (48%), Positives = 60/85 (70%)
Frame = +3 / +1
Query: 441 RAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGD 620
R+ DV++KI++CG+C++D+ +N+ ++ YP+VPGHEIAGVVT+VG +V F GD
Sbjct: 238 RSTGDDDVAIKILFCGMCHSDLHSIKNEWGNAMYPMVPGHEIAGVVTEVGKNVTRFNPGD 417
Query: 621 HVGVGTYVNSCRDCENCNISLDNHC 695
VGVG VNSC+ C+ C +N C
Sbjct: 418 RVGVGCMVNSCQSCDGCAEGFENTC 492
Score = 93.6 bits (198), Expect(2) = 4e-046
Identities = 33/54 (61%), Positives = 43/54 (79%)
Frame = +3 / +1
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTP 866
++T+N +D DGTVT GGYS+ + VHER+ + PDG PL + APLLCAGITVY+P
Sbjct: 505 IFTYNSVDRDGTVTYGGYSSSVTVHERFVVRFPDGMPLDRGAPLLCAGITVYSP 666
>gb|CD462607.1|CD462607 ETH1_38_C08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_C08_A002 5', mRNA sequence
Length = 578
Score = 141 bits (303), Expect(3) = 7e-046
Identities = 51/102 (50%), Positives = 74/102 (72%)
Frame = +3 / +3
Query: 441 RAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGD 620
R ++ GDV++K+++CGVC+ D+ +N+ ++ YP+VPGHE+ GVVT VGA V FK GD
Sbjct: 153 RVLRDGDVTIKVLFCGVCHTDLHIIKNEWGNALYPVVPGHEVVGVVTDVGAGVTKFKAGD 332
Query: 621 HVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVT 746
VGVG +++SCR CE+C+ +N+CP V T NG+ DG VT
Sbjct: 333 TVGVGYFIDSCRTCESCSTGHENYCPDLVLTSNGVARDGGVT 458
Score = 48.3 bits (99), Expect(3) = 7e-046
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +3 / +3
Query: 729 TDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGI 851
T T T+GG+S +VV + Y ++P P AAPLLCAG+
Sbjct: 456 TTTTTTQGGFSDVVVVDQHYVVRVPASLPPDGAAPLLCAGV 578
Score = 34.5 bits (69), Expect(3) = 7e-046
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNR 440
WAARD SG LSP+SF+R
Sbjct: 105 WAARDASGHLSPYSFSR 155
>gb|BG355707.2|BG355707 EM1_18_E06.b1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 157 bits (337), Expect(2) = 1e-042
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 129 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 308
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 309 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 467
Score = 95.5 bits (202), Expect(3) = 7e-024
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -3
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 466 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 287
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 286 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 131
Score = 37.7 bits (76), Expect(2) = 1e-042
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDG 809
G TKGG+S IVV+E Y ++PDG
Sbjct: 480 GVPTKGGFSDVIVVNEHYVVRVPDG 554
Score = 30.9 bits (61), Expect(3) = 7e-024
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -1
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 117 PGRLSPPSSPAALASPRTPLLAAATAEL 34
Score = 23.5 bits (45), Expect(3) = 7e-024
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1 / -3
Query: 808 PSGILKQYLSWTTM*VE*PPFVTVP 734
PSG S+TTM E PP V P
Sbjct: 553 PSGTRTT*CSFTTMTSENPPLVGTP 479
>gb|CD223179.1|CD223179 CCC1_26_D08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_26_D08_A007 5', mRNA sequence
Length = 647
Score = 174 bits (375), Expect = 2e-042
Identities = 66/165 (40%), Positives = 104/165 (63%)
Frame = +3 / +2
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
+QS M + + WAARD +G LSP+++ R DV +K++YCG+C+ D+
Sbjct: 152 SQSKRRMGSLASERKVVGWAARDATGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQA 331
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C C +++ +C
Sbjct: 332 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYC 511
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLAKAA 830
K ++++N + TDG T+GG+++ +VV +++ KIP G +AA
Sbjct: 512 NKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAGLAPEQAA 646
>gb|BG465813.1|BG465813 RHIZ2_48_H07.b1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 522
Score = 156 bits (336), Expect(2) = 2e-042
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +1
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 97 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 276
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 277 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGLVQTSNGVD 435
Score = 94.5 bits (200), Expect(3) = 8e-022
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -2
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 434 STPLEVCTNPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 255
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 254 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 99
Score = 37.7 bits (76), Expect(2) = 2e-042
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +3 / +1
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDG 809
G TKGG+S IVV+E Y ++PDG
Sbjct: 448 GVPTKGGFSDLIVVNEHYVVRVPDG 522
Score = 24.9 bits (48), Expect(3) = 8e-022
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2 / -3
Query: 357 PCELNSVSIPSAPAAPRTPLNASAAS 280
P L S P+A A+PRTPL + S
Sbjct: 85 PGRLAPPSSPAALASPRTPLATAELS 8
Score = 23.5 bits (45), Expect(3) = 8e-022
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = -1 / -2
Query: 808 PSGILKQYLSWTTM*VE*PPFVTVP 734
PSG S+TTM E PP V P
Sbjct: 521 PSGTRTT*CSFTTMRSENPPLVGTP 447
>gb|CX611816.1|CX611816 ANR1_26_H06.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_26_H06_A002 5', mRNA sequence
Length = 623
Score = 173 bits (372), Expect = 4e-042
Identities = 64/158 (40%), Positives = 101/158 (63%)
Frame = +3 / +1
Query: 336 TQSSVHMAAESENGNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWT 515
+QS M + + WAARD +G LSP+++ R DV +K++YCG+C+ D+
Sbjct: 145 SQSKRRMGSLASERKVVGWAARDATGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQA 324
Query: 516 RNKLNDSKYPLVPGHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
+N L SKYP+VPGHE+ G V +VG +V + VGD VGVG V CR+C C +++ +C
Sbjct: 325 KNHLGASKYPMVPGHEVVGEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYC 504
Query: 696 PKAVYTFNGIDTDGTVTKGGYSTHIVVHERYCFKIPDG 809
K ++++N + TDG T+GG+++ +VV +++ KIP G
Sbjct: 505 NKKIWSYNDVYTDGRPTQGGFASTMVVDQKFVVKIPAG 618
>gb|CW038409.1|CW038409 104_270_10504910_114_30385 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10504910, DNA
sequence
Length = 753
Score = 84.9 bits (179), Expect(3) = 2e-041
Identities = 32/57 (56%), Positives = 40/57 (70%)
Frame = +3 / +3
Query: 558 HEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
HE+ GVVT VG V FK GD VGVG +V+SCR CE+C+ +N+CP V T NG+D
Sbjct: 402 HEVVGVVTDVGHGVTKFKAGDTVGVGYFVDSCRTCESCSTGHENYCPDLVLTSNGVD 572
Score = 77.6 bits (163), Expect(3) = 2e-041
Identities = 28/55 (50%), Positives = 41/55 (74%)
Frame = +3 / +3
Query: 735 GTVTKGGYSTHIVVHERYCFKIPDGYPLAKAAPLLCAGITVYTPMMRHNMNQPGK 899
G TKGG+S +VV + + ++P+ PL AAPLLCAG+TVY+PM ++ +N+PGK
Sbjct: 585 GATTKGGFSDVLVVSQDFVVRVPESLPLDGAAPLLCAGVTVYSPMAQYALNEPGK 749
Score = 46.9 bits (96), Expect(3) = 2e-041
Identities = 13/33 (39%), Positives = 26/33 (78%)
Frame = +3 / +1
Query: 459 DVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPG 557
DV++K+++CG+C+ D+ +N+ ++ YP+VPG
Sbjct: 199 DVTIKVLFCGICHTDLHVIKNEWGNAMYPVVPG 297
>gb|BF588266.1|BF588266 FM1_39_F09.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 561
Score = 156 bits (336), Expect(2) = 2e-039
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +2
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 149 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 328
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 329 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGLVQTSNGVD 487
Score = 94.5 bits (200), Expect(2) = 1e-020
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -1
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 486 STPLEVCTNPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 307
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 306 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 151
Score = 27.6 bits (54), Expect(2) = 2e-039
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +3 / +2
Query: 735 GTVTKGGYSTHIVVHERY 788
G TKGG+S IVV+E Y
Sbjct: 500 GVPTKGGFSDLIVVNEHY 553
Score = 27.2 bits (53), Expect(2) = 1e-020
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -2 / -2
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASR 277
P L S P+A A+PRTPL + SR
Sbjct: 137 PGRLAPPSSPAALASPRTPLATAELSR 57
>gb|CD232208.1|CD232208 SS1_38_B01.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_38_B01_A012 5', mRNA sequence
Length = 560
Score = 157 bits (337), Expect(2) = 5e-039
Identities = 58/113 (51%), Positives = 80/113 (70%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +GVLSP++F+RR + DV++K++YCG+C+ D+ +N ++ YP+VPGHEI
Sbjct: 162 WAARDATGVLSPYNFSRRVPKDDDVTIKVLYCGICHTDLHIIKNDWGNAMYPVVPGHEIV 341
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGID 728
GVVT VG V FK GD VGVG +V SCR C++C +N+C V T NG+D
Sbjct: 342 GVVTGVGGGVTRFKAGDTVGVGYFVGSCRSCDSCGKGNENYCAGVVQTSNGVD 500
Score = 95.5 bits (202), Expect(2) = 4e-022
Identities = 55/112 (49%), Positives = 59/112 (52%)
Frame = -1 / -2
Query: 727 SMPLKV*TAFGQWLSREILQFSQSRQEFTYVPTPTWSPTLKPLTSAPT*VTTPAISCPGT 548
S PL+V T Q S + Q SQ RQE T PTPT SP L +T PT VTTP ISCPGT
Sbjct: 499 STPLEVCTTPAQ*FSFPLPQLSQERQEPTK*PTPTVSPALNRVTPPPTPVTTPTISCPGT 320
Query: 547 KGYFESLSLFRVQATSA*QTPQYMIFSETSPLCTALRLKLCGERTPEGSLAA 392
GY F + S Q PQ TS L KL GERTP SLAA
Sbjct: 319 TGYMAFPQSFLMMWRSVWQIPQ*STLIVTSSSLGTLLEKL*GERTPVASLAA 164
Score = 30.9 bits (61), Expect(2) = 4e-022
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / -3
Query: 357 PCELNSVSIPSAPAAPRTPLNASAASRL 274
P L+ S P+A A+PRTPL A+A + L
Sbjct: 150 PGRLSPPSSPAALASPRTPLLAAATAEL 67
Score = 25.8 bits (50), Expect(2) = 5e-039
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +2 / +2
Query: 731 RWNCHKGGLLHSH 769
RW H+GG+L H
Sbjct: 509 RWRAHQGGILRRH 547
>gb|CD230298.1|CD230298 SS1_42_G04.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_42_G04_A012 5', mRNA sequence
Length = 612
Score = 162 bits (348), Expect = 9e-039
Identities = 57/133 (42%), Positives = 91/133 (68%)
Frame = +3 / +3
Query: 390 WAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVPGHEIA 569
WAARD +G LSP+++ R DV +K++YCG+C+ D+ +N L SKYP+VPGHE+
Sbjct: 207 WAARDATGHLSPYTYTLRNTGPEDVVVKVLYCGICHTDIHQAKNHLGASKYPMVPGHEVV 386
Query: 570 GVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHCPKAVYTFNGIDTDGTVTK 749
G V +VG +V + VGD VGVG V CR+C C +++ +C K ++++N + TDG T+
Sbjct: 387 GEVVEVGPEVSKYGVGDVVGVGVIVGCCRECSPCKANVEQYCNKKIWSYNDVYTDGRPTQ 566
Query: 750 GGYSTHIVVHERY 788
GG+++ +VV +++
Sbjct: 567 GGFASTMVVDQKF 605
>gb|CN140888.1|CN140888 OX1_47_F12.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_47_F12_A002 5', mRNA sequence
Length = 636
Score = 130 bits (278), Expect(2) = 3e-038
Identities = 50/107 (46%), Positives = 71/107 (66%)
Frame = +3 / +2
Query: 375 GNCKAWAARDPSGVLSPHSFNRRAVQSGDVSLKIIYCGVCYADVAWTRNKLNDSKYPLVP 554
G AA D SG L+P + RR+ DV++KI++CG+C++D+ +N+ ++ YP+VP
Sbjct: 209 GKAVGLAAHDASGHLAPLTITRRSTGDDDVAIKILFCGMCHSDLHSIKNEWGNAMYPMVP 388
Query: 555 GHEIAGVVTQVGADVKGFKVGDHVGVGTYVNSCRDCENCNISLDNHC 695
GHEIAGVVT+VG +V F GD VGVG VNSC+ C+ C +N C
Sbjct: 389 GHEIAGVVTEVGKNVTRFNPGDRVGVGCMVNSCQSCDGCAEGFENTC 529
Score = 50.1 bits (103), Expect(2) = 3e-038
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +3 / +2
Query: 705 VYTFNGIDTDGTVTKGGYSTHIVVHERY 788
++T+N +D DGTVT GGYS+ + VHER+
Sbjct: 542 IFTYNSVDRDGTVTYGGYSSSVTVHERF 625
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,230,955,660
Number of Sequences: 832831
Number of extensions: 18596269
Number of successful extensions: 105616
Number of sequences better than 1.0e-020: 102
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 32326753174
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)