TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2478337.2.1
(729 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinol... 249 5e-081
gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation... 245 6e-064
gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated... 224 8e-062
gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated... 224 1e-061
gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorgh... 224 3e-061
gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum h... 224 1e-060
gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1... 224 1e-059
gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkali... 222 1e-059
gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation... 224 5e-058
gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorgh... 224 6e-058
gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adap... 224 1e-057
gb|CD231800.1|CD231800 SS1_30_D03.b1_A012 Salt-stressed see... 167 3e-057
gb|BF656823.1|BF656823 OV2_23_D07.g1_A002 Ovary 2 (OV2) Sor... 171 6e-054
gb|CD428756.1|CD428756 ETH1_36_H11.b1_A002 Ethylene-treated... 203 2e-053
gb|CD233638.1|CD233638 SS1_3_G02.b1_A012 Salt-stressed seed... 196 2e-052
gb|CD230488.1|CD230488 SS1_44_B08.b1_A012 Salt-stressed see... 173 2e-045
gb|CN128146.1|CN128146 RHOH1_27_G06.b1_A002 Acid- and alkal... 172 5e-045
gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-defici... 90 2e-039
gb|BE361244.1|BE361244 DG1_70_C10.g1_A002 Dark Grown 1 (DG1... 90 3e-039
gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1... 90 3e-039
gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation... 89 5e-039
gb|CN123868.1|CN123868 RHOH1_1_F04.b1_A002 Acid- and alkali... 90 8e-039
gb|CD210102.1|CD210102 HS1_57_F11.b1_A012 Heat-shocked seed... 91 4e-038
gb|CW253166.1|CW253166 104_716_11224935_116_35104_054 Sorgh... 91 4e-038
gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation... 91 4e-038
gb|CW480555.1|CW480555 fsbb001f239k22f0 Sorghum methylation... 91 4e-038
gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkal... 152 6e-036
gb|CD229975.1|CD229975 SS1_40_F09.b1_A012 Salt-stressed see... 94 1e-035
gb|CD221661.1|CD221661 CCC1_70_E11.b1_A007 Callus culture/c... 89 2e-034
gb|BI099614.1|BI099614 IP1_44_E02.g1_A002 Immature pannicle... 88 4e-034
gb|CW417495.1|CW417495 fsbb001f120i17f0 Sorghum methylation... 111 4e-033
gb|CW417496.1|CW417496 fsbb001f120i17k0 Sorghum methylation... 111 4e-033
gb|CW428522.1|CW428522 fsbb001f141e10k0 Sorghum methylation... 111 4e-033
gb|CW140343.1|CW140343 104_530_11135731_148_34916_066 Sorgh... 111 4e-033
gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sor... 85 9e-033
gb|CX607987.1|CX607987 ANR1_32_A06.b1_A002 Anaerobic roots ... 108 2e-032
gb|BG159238.1|BG159238 OV2_5_B04.g1_A002 Ovary 2 (OV2) Sorg... 98 2e-032
gb|CW454420.1|CW454420 fsbb001f198n16k0 Sorghum methylation... 111 5e-029
gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA ... 82 6e-029
gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stres... 82 6e-029
gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum ... 82 6e-029
gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum m... 82 6e-029
gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorgh... 82 6e-029
gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorgh... 82 6e-029
gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorgh... 82 6e-029
gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorgh... 82 6e-029
gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG... 82 6e-029
gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sor... 82 6e-029
gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/c... 82 6e-029
gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/c... 82 6e-029
gb|CN146254.1|CN146254 WOUND1_39_D02.b1_A002 Wounded leaves... 82 6e-029
gb|BF657393.1|BF657393 OV2_24_E08.g1_A002 Ovary 2 (OV2) Sor... 82 6e-029
gb|BG102529.1|BG102529 RHIZ2_34_B12.g1_A003 Rhizome2 (RHIZ2... 82 6e-029
gb|BG739434.1|BG739434 EM1_82_H04.g1_A002 Embryo 1 (EM1) So... 82 6e-029
gb|CN143945.1|CN143945 WOUND1_19_G06.b1_A002 Wounded leaves... 82 6e-029
gb|BG049527.1|BG049527 EM1_5_B12.g1_A002 Embryo 1 (EM1) Sor... 82 6e-029
gb|CX619969.1|CX619969 GABR1_49_B08.b1_A002 GA- or brassino... 82 6e-029
gb|BG412512.1|BG412512 OV2_35_C06.g1_A002 Ovary 2 (OV2) Sor... 82 6e-029
gb|CN125015.1|CN125015 RHOH1_8_G11.b1_A002 Acid- and alkali... 82 8e-029
gb|CW054610.1|CW054610 104_295_10516628_115_30179 Sorghum m... 111 1e-028
gb|BI245810.1|BI245810 IP1_64_F11.g1_A002 Immature pannicle... 81 2e-028
gb|CW041616.1|CW041616 104_275_10506649_115_30285 Sorghum m... 79 4e-028
gb|CN129367.1|CN129367 RHOH1_35_B11.b3_A002 Acid- and alkal... 81 6e-028
gb|CX609868.1|CX609868 ANR1_15_F01.b1_A002 Anaerobic roots ... 81 6e-028
gb|CN131170.1|CN131170 RHOH1_46_G08.b1_A002 Acid- and alkal... 81 6e-028
gb|CX610369.1|CX610369 ANR1_18_F11.b1_A002 Anaerobic roots ... 81 6e-028
gb|CN129415.1|CN129415 RHOH1_35_G04.b3_A002 Acid- and alkal... 81 6e-028
gb|CN126589.1|CN126589 RHOH1_18_C01.b1_A002 Acid- and alkal... 81 6e-028
gb|CX606110.1|CX606110 ANR1_1_E07.b1_A002 Anaerobic roots S... 81 6e-028
gb|CN125883.1|CN125883 RHOH1_14_A01.b1_A002 Acid- and alkal... 81 6e-028
gb|CF429637.1|CF429637 PH1_23_B04.b1_A002 Phosphorous-defic... 81 6e-028
gb|CD431147.1|CD431147 ETH1_7_B06.b1_A002 Ethylene-treated ... 81 6e-028
gb|CF429158.1|CF429158 PH1_20_E04.b1_A002 Phosphorous-defic... 81 6e-028
gb|BE360318.1|BE360318 DG1_62_E04.g1_A002 Dark Grown 1 (DG1... 81 6e-028
gb|CW115055.1|CW115055 104_490_11106333_148_34588_095 Sorgh... 81 6e-028
gb|CW268308.1|CW268308 104_739_11401215_116_35306_064 Sorgh... 81 6e-028
gb|CN135165.1|CN135165 OX1_31_B04.b1_A002 Oxidatively-stres... 81 1e-027
gb|CF427057.1|CF427057 PH1_3_D05.b1_A002 Phosphorous-defici... 81 1e-027
gb|CN144039.1|CN144039 WOUND1_19_G06.g1_A002 Wounded leaves... 82 2e-027
gb|CD229484.1|CD229484 CCC1_16_D06.b1_A007 Callus culture/c... 82 2e-027
gb|CN125086.1|CN125086 RHOH1_8_F08.g1_A002 Acid- and alkali... 121 2e-026
gb|CN136626.1|CN136626 OX1_44_G12.b1_A002 Oxidatively-stres... 74 2e-026
gb|CW155769.1|CW155769 104_558_11146316_116_36370_074 Sorgh... 74 2e-026
gb|BE362334.1|BE362334 DG1_85_A02.g1_A002 Dark Grown 1 (DG1... 73 3e-026
gb|BG158524.1|BG158524 RHIZ2_41_E04.g1_A003 Rhizome2 (RHIZ2... 73 5e-026
gb|CD226829.1|CD226829 CCC1_48_E12.b1_A007 Callus culture/c... 81 5e-026
gb|BG559141.1|BG559141 RHIZ2_55_B12.g1_A003 Rhizome2 (RHIZ2... 72 6e-026
gb|BG556320.1|BG556320 EM1_68_E05.g1_A002 Embryo 1 (EM1) So... 72 6e-026
gb|CW396909.1|CW396909 fsbb001f085j02k0 Sorghum methylation... 85 2e-025
gb|CD227862.1|CD227862 CCC1_56_H03.b1_A007 Callus culture/c... 80 2e-025
gb|BI211697.1|BI211697 IP1_60_G05.g1_A002 Immature pannicle... 70 2e-025
gb|CD219638.1|CD219638 CCC1_58_F06.b1_A007 Callus culture/c... 70 2e-025
gb|CN131258.1|CN131258 RHOH1_46_G08.g1_A002 Acid- and alkal... 75 3e-025
gb|CN146331.1|CN146331 WOUND1_39_D02.g1_A002 Wounded leaves... 82 3e-025
gb|BZ339450.1|BZ339450 ic32c10.b1 WGS-SbicolorF (JM107 adap... 101 3e-025
gb|CW241492.1|CW241492 104_700_11218800_148_37543_086 Sorgh... 101 3e-025
gb|BG049047.1|BG049047 OV1_22_E11.g1_A002 Ovary 1 (OV1) Sor... 101 3e-025
gb|BG049103.1|BG049103 OV1_23_C12.g1_A002 Ovary 1 (OV1) Sor... 101 3e-025
gb|CD220424.1|CD220424 CCC1_67_F12.b1_A007 Callus culture/c... 86 1e-024
gb|CW233768.1|CW233768 104_687_11213622_116_37380_027 Sorgh... 99 1e-024
gb|CN130578.1|CN130578 RHOH1_42_A01.g1_A002 Acid- and alkal... 113 2e-024
gb|CN129456.1|CN129456 RHOH1_35_B11.g1_A002 Acid- and alkal... 81 5e-024
gb|CW217959.1|CW217959 104_651_11195928_148_37066_090 Sorgh... 68 5e-024
gb|CW435340.1|CW435340 fsbb001f151h04k0 Sorghum methylation... 68 5e-024
gb|CN131734.1|CN131734 OX1_2_B01.b1_A002 Oxidatively-stress... 89 2e-023
gb|CD428079.1|CD428079 ETH1_32_E01.g1_A002 Ethylene-treated... 82 2e-023
gb|CD432148.1|CD432148 ETH1_26_B01.b1_A002 Ethylene-treated... 71 3e-023
gb|CD221639.1|CD221639 CCC1_70_G11.b1_A007 Callus culture/c... 89 6e-023
gb|CW060787.1|CW060787 104_304_10520046_115_30144 Sorghum m... 65 8e-023
gb|CN124005.1|CN124005 RHOH1_2_B05.b1_A002 Acid- and alkali... 65 8e-023
gb|CW387885.1|CW387885 fsbb001f072g19f0 Sorghum methylation... 82 1e-022
gb|CW407265.1|CW407265 fsbb001f100k14k0 Sorghum methylation... 62 2e-022
gb|CD227549.1|CD227549 CCC1_52_B10.b1_A007 Callus culture/c... 62 2e-022
gb|CD223455.1|CD223455 CCC1_28_H10.b1_A007 Callus culture/c... 62 2e-022
gb|CL155532.1|CL155532 104_341_10782207_114_31471_303 Sorgh... 62 2e-022
gb|CW138756.1|CW138756 104_528_11134865_116_34888_069 Sorgh... 62 2e-022
gb|CW138757.1|CW138757 104_528_11134865_148_34892_069 Sorgh... 62 2e-022
gb|BF421147.1|BF421147 FM1_6_A06.b1_A003 Floral-Induced Mer... 62 2e-022
gb|BG047628.1|BG047628 OV1_26_C01.b1_A002 Ovary 1 (OV1) Sor... 99 2e-022
gb|CW051419.1|CW051419 104_291_10515236_114_30192 Sorghum m... 61 4e-022
gb|CW039698.1|CW039698 104_272_10505645_114_30389 Sorghum m... 82 1e-021
>gb|CX613415.1|CX613415 GABR1_8_B11.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_B11_A002 3', mRNA sequence
Length = 779
Score = 249 bits (538), Expect(4) = 5e-081
Identities = 100/114 (87%), Positives = 105/114 (92%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFYLEVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 72 SNPFYLEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 251
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNCGGGSVLRPPMHALGWII 386
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*LMNC GGS+ PP L ++
Sbjct: 252 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*LMNCAGGSIDLPPRLRLAGLL 413
Score = 178 bits (384), Expect(4) = 8e-061
Identities = 80/106 (75%), Positives = 83/106 (78%)
Frame = +3 / -2
Query: 411 GGRRTEPPPQFINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLE 590
GGR EPP QFIN E* T+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLE
Sbjct: 388 GGRSIEPPAQFIN*E*LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLE 209
Query: 591 L*RQSAPQFCTIGVHVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
L*R SAPQFCTIGV VP PAS+R TALR K*NGL+
Sbjct: 208 L*RHSAPQFCTIGVQVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 71
Score = 127 bits (273), Expect(4) = 3e-042
Identities = 55/68 (80%), Positives = 60/68 (88%)
Frame = +2 / -1
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 278 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 99
Query: 701 EHLQVERV 724
+HLQVE V
Sbjct: 98 QHLQVEWV 75
Score = 80.8 bits (170), Expect(4) = 3e-025
Identities = 36/54 (66%), Positives = 39/54 (72%)
Frame = -2 / +2
Query: 632 DPDGAELGRALALQLQHRQGAEGALLAPADXXXXXXXXXXXRHPRRLEPRGHVP 471
D DGAELGRA+ALQLQHRQGA+GALLAP RHPRRLEPR +VP
Sbjct: 167 DADGAELGRAVALQLQHRQGAQGALLAPPHLRLRQGARRQQRHPRRLEPRRNVP 328
Score = 48.3 bits (99), Expect(4) = 8e-061
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -3
Query: 179 RPLHTSLGDCRDRGGSEEH 235
R LHTSLGDCRDRGGSEEH
Sbjct: 603 RRLHTSLGDCRDRGGSEEH 547
Score = 41.8 bits (85), Expect(4) = 5e-081
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2 / +3
Query: 233 VLHSLHGLCSHLVMC 189
VLHSLHGLCSHLVMC
Sbjct: 549 VLHSLHGLCSHLVMC 593
Score = 38.6 bits (78), Expect(4) = 3e-042
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1 / -2
Query: 133 PNSCPEPSQRXXXXXXXXXHITR*LQRPWRE*RT 234
P + ++ HITR*LQRPWRE*RT
Sbjct: 649 PKKKQQKEKKNREINTTTTHITR*LQRPWRE*RT 548
Score = 38.2 bits (77), Expect(4) = 5e-081
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 404 CAWLDYYAWPRSAFQ 360
CAW DYY WPRSA Q
Sbjct: 394 CAWPDYYGWPRSALQ 438
Score = 35.4 bits (71), Expect(4) = 8e-061
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -2
Query: 368 HFLATHNNPAKRMHWG 415
HFLATHNNPAKR G
Sbjct: 430 HFLATHNNPAKRSRGG 383
Score = 34.5 bits (69), Expect(4) = 5e-081
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -3 / +3
Query: 94 VPRNPFRELSSCF 56
VPRNPFREL+SCF
Sbjct: 735 VPRNPFRELNSCF 773
Score = 34.5 bits (69), Expect(4) = 3e-025
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3 / +1
Query: 235 VFFTPSTVSAVT**C 191
VFFTPSTVSAVT**C
Sbjct: 547 VFFTPSTVSAVT**C 591
Score = 33.1 bits (66), Expect(4) = 8e-061
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 53 KKAGTQFSERIAWYR 97
+K G QFSERIAWY+
Sbjct: 776 RKTGVQFSERIAWYK 732
Score = 31.3 bits (62), Expect(4) = 3e-042
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 351 PRTLESTSWPRIIIQPSA 404
P L+ TSWP III+PSA
Sbjct: 447 PLQLQCTSWPPIIIRPSA 394
Score = 31.3 bits (62), Expect(4) = 3e-042
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3 / -2
Query: 57 KQELNSLKGLRGTEN 101
KQE NSLKGLRGT++
Sbjct: 772 KQEFNSLKGLRGTKH 728
Score = 30.4 bits (60), Expect(4) = 3e-025
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 96 LYHAILSEN*VPAF 55
LYHAILSEN* P F
Sbjct: 733 LYHAILSEN*TPVF 774
Score = 29.0 bits (57), Expect(4) = 3e-025
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 414 PQCMRLAGLLCVAKKC 367
P +RLAGLL VAKKC
Sbjct: 384 PPRLRLAGLLWVAKKC 431
>gb|CW433265.1|CW433265 fsbb001f148g13f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f148g13, DNA
sequence
Length = 768
Score = 245 bits (529), Expect = 6e-064
Identities = 97/102 (95%), Positives = 100/102 (98%)
Frame = -3 / -2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFYLEVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 314 SNPFYLEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 135
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNCGGGSV 422
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*LMNC GGS+
Sbjct: 134 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*LMNCAGGSI 9
Score = 176 bits (378), Expect = 4e-043
Identities = 79/105 (75%), Positives = 82/105 (78%)
Frame = +3 / +1
Query: 414 GRRTEPPPQFINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL 593
GR EPP QFIN E* T+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL
Sbjct: 1 GRSIEPPAQFIN*E*LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL 180
Query: 594 *RQSAPQFCTIGVHVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
*R SAPQFCTIGV VP PAS+R TALR K*NGL+
Sbjct: 181 *RHSAPQFCTIGVQVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 315
Score = 127 bits (273), Expect = 1e-028
Identities = 55/68 (80%), Positives = 60/68 (88%)
Frame = +2 / +3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 108 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 287
Query: 701 EHLQVERV 724
+HLQVE V
Sbjct: 288 QHLQVEWV 311
>gb|CD462510.1|CD462510 ETH1_38_D10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_38_D10_A002 3', mRNA sequence
Length = 669
Score = 224 bits (484), Expect(3) = 8e-062
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 69 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 248
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 249 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 350
Score = 158 bits (340), Expect(3) = 2e-042
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = +3 / -3
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 343 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 164
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NGL+
Sbjct: 163 QVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 68
Score = 126 bits (270), Expect(3) = 6e-032
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2 / -2
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 275 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 96
Query: 701 EHLQVERV 724
+HL+VE V
Sbjct: 95 QHLEVEWV 72
Score = 32.2 bits (64), Expect(3) = 8e-062
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / +1
Query: 112 VCA*FSVPRNPFRELSSCFLVS 47
+C F VPRNP R L C+L+S
Sbjct: 589 LCECFFVPRNPLR*LKYCYLIS 654
Score = 29.9 bits (59), Expect(3) = 2e-042
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3 / -2
Query: 48 ETRKQELNSLKGLRGTENYAH 110
E R Q N LKGLRGT+ ++H
Sbjct: 653 EMR*QYFNYLKGLRGTKKHSH 591
Score = 28.1 bits (55), Expect(3) = 6e-032
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / -1
Query: 50 NKKAGTQFSERIAWYRKLRT 109
N+ A Q S+RIAWY+K T
Sbjct: 651 NEIAVLQLSQRIAWYKKTLT 592
Score = 26.3 bits (51), Expect(3) = 2e-042
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 474 GDCRGRGGREE 442
Score = 24.9 bits (48), Expect(3) = 6e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 469 LQRPWREGRT 440
Score = 23.5 bits (45), Expect(3) = 8e-062
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 441 VLPSLHGLCS 470
>gb|CD432496.1|CD432496 ETH1_30_C04.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_30_C04_A002 3', mRNA sequence
Length = 657
Score = 224 bits (484), Expect(3) = 1e-061
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / +1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 70 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 249
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 250 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 351
Score = 158 bits (340), Expect(3) = 5e-042
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = +3 / -2
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 344 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 165
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NGL+
Sbjct: 164 QVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 69
Score = 126 bits (270), Expect(3) = 2e-031
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2 / -1
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 276 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 97
Query: 701 EHLQVERV 724
+HL+VE V
Sbjct: 96 QHLEVEWV 73
Score = 31.3 bits (62), Expect(3) = 1e-061
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3 / +2
Query: 112 VCA*FSVPRNPFRELSSCFLVS 47
+C F VPRNP R L C+L+S
Sbjct: 590 LCECFFVPRNPLR*LKYCYLMS 655
Score = 28.6 bits (56), Expect(3) = 5e-042
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3 / -1
Query: 48 ETRKQELNSLKGLRGTENYAH 110
+ R Q N LKGLRGT+ ++H
Sbjct: 654 DMR*QYFNYLKGLRGTKKHSH 592
Score = 26.3 bits (51), Expect(3) = 5e-042
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 475 GDCRGRGGREE 443
Score = 26.3 bits (51), Expect(3) = 2e-031
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 68 QFSERIAWYRKLRT 109
Q S+RIAWY+K T
Sbjct: 634 QLSQRIAWYKKTLT 593
Score = 24.9 bits (48), Expect(3) = 2e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 470 LQRPWREGRT 441
Score = 23.5 bits (45), Expect(3) = 1e-061
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 442 VLPSLHGLCS 471
>gb|CW204078.1|CW204078 104_631_11186348_148_37094_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11186348, DNA
sequence
Length = 736
Score = 224 bits (484), Expect(3) = 3e-061
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / -2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 591 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 412
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 411 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 310
Score = 158 bits (340), Expect(3) = 9e-042
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = +3 / +2
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 317 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 496
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NGL+
Sbjct: 497 QVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 592
Score = 126 bits (270), Expect(3) = 7e-032
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2 / +1
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 385 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 564
Query: 701 EHLQVERV 724
+HL+VE V
Sbjct: 565 QHLEVEWV 588
Score = 30.4 bits (60), Expect(3) = 3e-061
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 112 VCA*FSVPRNPFRELSSCFLV 50
+C F VPRNP R L C+L+
Sbjct: 71 LCECFFVPRNPLR*LKYCYLI 9
Score = 28.1 bits (55), Expect(3) = 7e-032
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 54 RKQELNSLKGLRGTENYAH 110
R Q N LKGLRGT+ ++H
Sbjct: 13 R*QYFNYLKGLRGTKKHSH 69
Score = 28.1 bits (55), Expect(3) = 9e-042
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / +3
Query: 50 NKKAGTQFSERIAWYRKLRT 109
N+ A Q S+RIAWY+K T
Sbjct: 9 NEIAVLQLSQRIAWYKKTLT 68
Score = 26.3 bits (51), Expect(3) = 9e-042
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 186 GDCRGRGGREE 218
Score = 24.9 bits (48), Expect(3) = 7e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 191 LQRPWREGRT 220
Score = 23.5 bits (45), Expect(3) = 3e-061
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 219 VLPSLHGLCS 190
>gb|DN552513.1|DN552513 pSHR-RT-A-H1_H09_C105 pSHR Sorghum halepense cDNA, mRNA sequence
Length = 1256
Score = 224 bits (484), Expect(3) = 1e-060
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / -3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 606 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 427
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 426 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 325
Score = 154 bits (330), Expect(3) = 6e-040
Identities = 69/92 (75%), Positives = 72/92 (78%)
Frame = +3 / +2
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E* T+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 332 E*LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 511
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NG +
Sbjct: 512 QVPQPASIRSTALRSPSPSSNSTSTSK*NGFE 607
Score = 128 bits (274), Expect(3) = 6e-032
Identities = 55/69 (79%), Positives = 61/69 (88%)
Frame = +2 / +1
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 400 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 579
Query: 701 EHLQVERVR 727
+HL+VE VR
Sbjct: 580 QHLKVEWVR 606
Score = 30.4 bits (60), Expect(3) = 1e-060
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -3 / -3
Query: 112 VCA*FSVPRNPFRELSSCFLV 50
+C F VPRNP R L C+L+
Sbjct: 87 LCECFFVPRNPLR*LKYCYLI 25
Score = 28.1 bits (55), Expect(3) = 6e-032
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 54 RKQELNSLKGLRGTENYAH 110
R Q N LKGLRGT+ ++H
Sbjct: 29 R*QYFNYLKGLRGTKKHSH 85
Score = 28.1 bits (55), Expect(3) = 6e-040
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +2 / +1
Query: 50 NKKAGTQFSERIAWYRKLRT 109
N+ A Q S+RIAWY+K T
Sbjct: 25 NEIAVLQLSQRIAWYKKTLT 84
Score = 26.3 bits (51), Expect(3) = 6e-040
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 201 GDCRGRGGREE 233
Score = 24.9 bits (48), Expect(3) = 6e-032
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 206 LQRPWREGRT 235
Score = 23.5 bits (45), Expect(3) = 1e-060
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 234 VLPSLHGLCS 205
>gb|BE357973.1|BE357973 DG1_23_H03.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 582
Score = 224 bits (484), Expect(3) = 1e-059
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 15 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 194
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 195 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 296
Score = 158 bits (340), Expect(2) = 3e-039
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = +3 / -3
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 289 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 110
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NGL+
Sbjct: 109 QVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 14
Score = 126 bits (270), Expect(2) = 3e-029
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2 / -2
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 221 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 42
Query: 701 EHLQVERV 724
+HL+VE V
Sbjct: 41 QHLEVEWV 18
Score = 26.3 bits (51), Expect(2) = 3e-039
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 420 GDCRGRGGREE 388
Score = 24.9 bits (48), Expect(2) = 3e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 415 LQRPWREGRT 386
Score = 24.4 bits (47), Expect(3) = 1e-059
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 111 CVRSFLYHAIL 79
CV FLYHAIL
Sbjct: 536 CVSVFLYHAIL 568
Score = 23.5 bits (45), Expect(3) = 1e-059
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 387 VLPSLHGLCS 416
>gb|CN125001.1|CN125001 RHOH1_8_F08.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_8_F08_A002 3', mRNA sequence
Length = 730
Score = 222 bits (480), Expect(3) = 1e-059
Identities = 88/94 (93%), Positives = 92/94 (97%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNP YLEVL+EFEDGDGDLSAV+LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFS R
Sbjct: 144 SNPLYLEVLVEFEDGDGDLSAVNLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSFR 323
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 324 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 425
Score = 156 bits (336), Expect(3) = 1e-040
Identities = 69/92 (75%), Positives = 74/92 (80%)
Frame = +3 / -1
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV R+EKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 418 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRNEKGALSALPVLEL*RHSAPQFCTIGV 239
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R+TALR K NGL+
Sbjct: 238 QVPQPASIRFTALRSPSPSSNSTSTSKYNGLE 143
Score = 119 bits (254), Expect(2) = 6e-027
Identities = 51/68 (75%), Positives = 58/68 (85%)
Frame = +2 / -3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVG + EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 350 EHLAGVGSEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 171
Query: 701 EHLQVERV 724
+HL ++ V
Sbjct: 170 QHL*IQWV 147
Score = 26.7 bits (52), Expect(3) = 1e-059
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3 / +1
Query: 112 VCA*FSVPRNPFRELSSCFLV 50
+C F VP NP R L C+L+
Sbjct: 664 LCECFFVPSNPLR*LKYCYLM 726
Score = 26.3 bits (51), Expect(3) = 1e-040
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 549 GDCRGRGGREE 517
Score = 26.3 bits (51), Expect(3) = 1e-040
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 68 QFSERIAWYRKLRT 109
Q S+RIAWY+K T
Sbjct: 708 QLSQRIAWYKKTLT 667
Score = 24.9 bits (48), Expect(2) = 6e-027
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 544 LQRPWREGRT 515
Score = 23.5 bits (45), Expect(3) = 1e-059
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 516 VLPSLHGLCS 545
>gb|CW402616.1|CW402616 fsbb001f093p05k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f093p05, DNA
sequence
Length = 658
Score = 224 bits (484), Expect(2) = 5e-058
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / -3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 566 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 387
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 386 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 285
Score = 158 bits (340), Expect(2) = 4e-039
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = +3 / +1
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 292 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 471
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NGL+
Sbjct: 472 QVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 567
Score = 126 bits (270), Expect(2) = 4e-029
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2 / +3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 360 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 539
Query: 701 EHLQVERV 724
+HL+VE V
Sbjct: 540 QHLEVEWV 563
Score = 26.3 bits (51), Expect(2) = 4e-039
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / +2
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 161 GDCRGRGGREE 193
Score = 24.9 bits (48), Expect(2) = 4e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 166 LQRPWREGRT 195
Score = 23.5 bits (45), Expect(2) = 5e-058
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 194 VLPSLHGLCS 165
>gb|CL165129.1|CL165129 104_359_10808375_114_31816_359 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808375, DNA
sequence
Length = 758
Score = 224 bits (484), Expect(2) = 6e-058
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / +1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 337 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 516
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 517 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 618
Score = 158 bits (340), Expect(2) = 4e-039
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = +3 / -1
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 611 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 432
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NGL+
Sbjct: 431 QVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 336
Score = 126 bits (270), Expect(2) = 4e-029
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2 / -3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 543 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 364
Query: 701 EHLQVERV 724
+HL+VE V
Sbjct: 363 QHLEVEWV 340
Score = 26.3 bits (51), Expect(2) = 4e-039
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 742 GDCRGRGGREE 710
Score = 24.9 bits (48), Expect(2) = 4e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 737 LQRPWREGRT 708
Score = 23.5 bits (45), Expect(2) = 6e-058
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 709 VLPSLHGLCS 738
>gb|BZ349112.1|BZ349112 hq87c03.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hq87c03 5', DNA sequence
Length = 436
Score = 224 bits (484), Expect = 1e-057
Identities = 89/94 (94%), Positives = 92/94 (97%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 147 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 326
Query: 547 LTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
LTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 327 LTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*I 428
Score = 158 bits (340), Expect = 8e-038
Identities = 71/92 (77%), Positives = 74/92 (80%)
Frame = +3 / -1
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 421 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 242
Query: 633 HVPHPASMRWTALRXXXXXXXXXXXXK*NGLD 728
VP PAS+R TALR K*NGL+
Sbjct: 241 QVPQPASIRSTALRSPSPSSNSTSTSK*NGLE 146
Score = 126 bits (270), Expect = 3e-028
Identities = 54/68 (79%), Positives = 60/68 (88%)
Frame = +2 / -3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELD 700
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL
Sbjct: 353 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELH 174
Query: 701 EHLQVERV 724
+HL+VE V
Sbjct: 173 QHLEVEWV 150
>gb|CD231800.1|CD231800 SS1_30_D03.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_30_D03_A012 3', mRNA sequence
Length = 604
Score = 167 bits (360), Expect(4) = 3e-057
Identities = 68/80 (85%), Positives = 72/80 (90%)
Frame = -3 / +3
Query: 625 MVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*L 446
MVQNWGALWRYNSNTGKALKAPFSLRLTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*L
Sbjct: 3 MVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS*L 182
Query: 445 MNCGGGSVLRPPMHALGWII 386
MNC GGS+ PP L ++
Sbjct: 183 MNCAGGSIDLPPRLRLAGLL 242
Score = 145 bits (311), Expect(4) = 5e-051
Identities = 64/72 (88%), Positives = 64/72 (88%)
Frame = +3 / -1
Query: 411 GGRRTEPPPQFINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLE 590
GGR EPP QFIN E* TKERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLE
Sbjct: 217 GGRSIEPPAQFIN*E*LTKERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLE 38
Query: 591 L*RQSAPQFCTI 626
L*R SAPQFCTI
Sbjct: 37 L*RHSAPQFCTI 2
Score = 81.7 bits (172), Expect(4) = 6e-026
Identities = 36/52 (69%), Positives = 38/52 (73%)
Frame = -2 / +2
Query: 626 DGAELGRALALQLQHRQGAEGALLAPADXXXXXXXXXXXRHPRRLEPRGHVP 471
DGAELGRA+ALQLQHRQGA+GALLAP RHPRRLEPR HVP
Sbjct: 2 DGAELGRAVALQLQHRQGAQGALLAPPHLRLRQGARRQQRHPRRLEPRRHVP 157
Score = 75.8 bits (159), Expect(4) = 6e-027
Identities = 30/35 (85%), Positives = 33/35 (94%)
Frame = +2 / -3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHH 625
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHH
Sbjct: 107 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHH 3
Score = 48.3 bits (99), Expect(4) = 5e-051
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -2
Query: 179 RPLHTSLGDCRDRGGSEEH 235
R LHTSLGDCRDRGGSEEH
Sbjct: 432 RRLHTSLGDCRDRGGSEEH 376
Score = 41.8 bits (85), Expect(4) = 3e-057
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2 / +3
Query: 233 VLHSLHGLCSHLVMC 189
VLHSLHGLCSHLVMC
Sbjct: 378 VLHSLHGLCSHLVMC 422
Score = 38.6 bits (78), Expect(4) = 6e-027
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1 / -1
Query: 133 PNSCPEPSQRXXXXXXXXXHITR*LQRPWRE*RT 234
P + ++ HITR*LQRPWRE*RT
Sbjct: 478 PKKKQQKEKKNREINTTTTHITR*LQRPWRE*RT 377
Score = 38.2 bits (77), Expect(4) = 3e-057
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 404 CAWLDYYAWPRSAFQ 360
CAW DYY WPRSA Q
Sbjct: 223 CAWPDYYGWPRSALQ 267
Score = 35.4 bits (71), Expect(4) = 5e-051
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 368 HFLATHNNPAKRMHWG 415
HFLATHNNPAKR G
Sbjct: 259 HFLATHNNPAKRSRGG 212
Score = 34.5 bits (69), Expect(4) = 3e-057
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = -3 / +3
Query: 94 VPRNPFRELSSCF 56
VPRNPFREL+SCF
Sbjct: 564 VPRNPFRELNSCF 602
Score = 34.5 bits (69), Expect(4) = 6e-026
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3 / +1
Query: 235 VFFTPSTVSAVT**C 191
VFFTPSTVSAVT**C
Sbjct: 376 VFFTPSTVSAVT**C 420
Score = 32.2 bits (64), Expect(4) = 5e-051
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 56 KAGTQFSERIAWYR 97
K G QFSERIAWY+
Sbjct: 602 KTGVQFSERIAWYK 561
Score = 31.3 bits (62), Expect(4) = 6e-027
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 351 PRTLESTSWPRIIIQPSA 404
P L+ TSWP III+PSA
Sbjct: 276 PLQLQCTSWPPIIIRPSA 223
Score = 31.3 bits (62), Expect(4) = 6e-027
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3 / -1
Query: 57 KQELNSLKGLRGTEN 101
KQE NSLKGLRGT++
Sbjct: 601 KQEFNSLKGLRGTKH 557
Score = 30.4 bits (60), Expect(4) = 6e-026
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 96 LYHAILSEN*VPAF 55
LYHAILSEN* P F
Sbjct: 562 LYHAILSEN*TPVF 603
Score = 29.0 bits (57), Expect(4) = 6e-026
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / +3
Query: 414 PQCMRLAGLLCVAKKC 367
P +RLAGLL VAKKC
Sbjct: 213 PPRLRLAGLLWVAKKC 260
>gb|BF656823.1|BF656823 OV2_23_D07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 552
Score = 171 bits (367), Expect(3) = 6e-054
Identities = 69/81 (85%), Positives = 73/81 (90%)
Frame = -3 / +2
Query: 628 PMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS* 449
PMVQNWGALWRYNSNTGKALKAPFSLRLTSDSG+VLVANNVIPAGWNPGATYRSLVNYS*
Sbjct: 2 PMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGATYRSLVNYS* 181
Query: 448 LMNCGGGSVLRPPMHALGWII 386
LMNC GGS+ PP L ++
Sbjct: 182 LMNCAGGSIDLPPRLRLAGLL 244
Score = 146 bits (314), Expect(3) = 3e-047
Identities = 64/73 (87%), Positives = 65/73 (89%)
Frame = +3 / -1
Query: 411 GGRRTEPPPQFINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLE 590
GGR EPP QFIN E* T+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLE
Sbjct: 219 GGRSIEPPAQFIN*E*LTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLE 40
Query: 591 L*RQSAPQFCTIG 629
L*R SAPQFCTIG
Sbjct: 39 L*RHSAPQFCTIG 1
Score = 78.5 bits (165), Expect(3) = 1e-021
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = -2 / +1
Query: 626 DGAELGRALALQLQHRQGAEGALLAPADXXXXXXXXXXXRHPRRLEPRGHVP 471
DGAELGRA+ALQLQHRQGA+GALLAP RHPRRLEPR +VP
Sbjct: 4 DGAELGRAVALQLQHRQGAQGALLAPPHLRLRQGARRQQRHPRRLEPRRNVP 159
Score = 78.0 bits (164), Expect(3) = 2e-023
Identities = 31/36 (86%), Positives = 34/36 (94%)
Frame = +2 / -3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHR 628
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR
Sbjct: 109 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHR 2
Score = 48.3 bits (99), Expect(3) = 3e-047
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -2
Query: 179 RPLHTSLGDCRDRGGSEEH 235
R LHTSLGDCRDRGGSEEH
Sbjct: 434 RRLHTSLGDCRDRGGSEEH 378
Score = 41.8 bits (85), Expect(3) = 6e-054
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2 / +2
Query: 233 VLHSLHGLCSHLVMC 189
VLHSLHGLCSHLVMC
Sbjct: 380 VLHSLHGLCSHLVMC 424
Score = 38.6 bits (78), Expect(3) = 2e-023
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +1 / -1
Query: 133 PNSCPEPSQRXXXXXXXXXHITR*LQRPWRE*RT 234
P + ++ HITR*LQRPWRE*RT
Sbjct: 480 PKKKQQKEKKNREINTTTTHITR*LQRPWRE*RT 379
Score = 38.2 bits (77), Expect(3) = 6e-054
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +3
Query: 404 CAWLDYYAWPRSAFQ 360
CAW DYY WPRSA Q
Sbjct: 225 CAWPDYYGWPRSALQ 269
Score = 35.4 bits (71), Expect(3) = 3e-047
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -1
Query: 368 HFLATHNNPAKRMHWG 415
HFLATHNNPAKR G
Sbjct: 261 HFLATHNNPAKRSRGG 214
Score = 34.5 bits (69), Expect(3) = 1e-021
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -3 / +3
Query: 235 VFFTPSTVSAVT**C 191
VFFTPSTVSAVT**C
Sbjct: 378 VFFTPSTVSAVT**C 422
Score = 31.3 bits (62), Expect(3) = 2e-023
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 351 PRTLESTSWPRIIIQPSA 404
P L+ TSWP III+PSA
Sbjct: 278 PLQLQCTSWPPIIIRPSA 225
Score = 29.0 bits (57), Expect(3) = 1e-021
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -1 / +2
Query: 414 PQCMRLAGLLCVAKKC 367
P +RLAGLL VAKKC
Sbjct: 215 PPRLRLAGLLWVAKKC 262
>gb|CD428756.1|CD428756 ETH1_36_H11.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_36_H11_A002 3', mRNA sequence
Length = 531
Score = 203 bits (438), Expect(3) = 2e-053
Identities = 81/84 (96%), Positives = 83/84 (98%)
Frame = -3 / +3
Query: 697 EFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLV 518
EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSG+VLV
Sbjct: 3 EFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKVLV 182
Query: 517 ANNVIPAGWNPGATYRSLVNYS*L 446
ANNVIPAGWNPGATYRSLVNYS*+
Sbjct: 183 ANNVIPAGWNPGATYRSLVNYS*I 254
Score = 149 bits (321), Expect(2) = 1e-036
Identities = 66/74 (89%), Positives = 68/74 (91%)
Frame = +3 / -3
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 247 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 68
Query: 633 HVPHPASMRWTALR 674
VP PAS+R TALR
Sbjct: 67 QVPQPASIRSTALR 26
Score = 114 bits (244), Expect(2) = 1e-025
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = +2 / -2
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLEL 697
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVA+AVLEL
Sbjct: 179 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAIAVLEL 3
Score = 26.3 bits (51), Expect(2) = 1e-036
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -1
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 378 GDCRGRGGREE 346
Score = 24.9 bits (48), Expect(2) = 1e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 373 LQRPWREGRT 344
Score = 24.4 bits (47), Expect(3) = 2e-053
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 111 CVRSFLYHAIL 79
CV FLYHAIL
Sbjct: 494 CVSVFLYHAIL 526
Score = 23.5 bits (45), Expect(3) = 2e-053
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 345 VLPSLHGLCS 374
>gb|CD233638.1|CD233638 SS1_3_G02.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_3_G02_A012 3', mRNA sequence
Length = 542
Score = 196 bits (422), Expect(3) = 2e-052
Identities = 78/81 (96%), Positives = 80/81 (98%)
Frame = -3 / +3
Query: 688 DGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANN 509
DGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSG+VLVANN
Sbjct: 3 DGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKVLVANN 182
Query: 508 VIPAGWNPGATYRSLVNYS*L 446
VIPAGWNPGATYRSLVNYS*+
Sbjct: 183 VIPAGWNPGATYRSLVNYS*I 245
Score = 149 bits (321), Expect(3) = 5e-040
Identities = 66/74 (89%), Positives = 68/74 (91%)
Frame = +3 / -2
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 238 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 59
Query: 633 HVPHPASMRWTALR 674
VP PAS+R TALR
Sbjct: 58 QVPQPASIRSTALR 17
Score = 109 bits (232), Expect(2) = 4e-024
Identities = 46/56 (82%), Positives = 50/56 (89%)
Frame = +2 / -1
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAV 688
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAV
Sbjct: 170 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAV 3
Score = 29.9 bits (59), Expect(3) = 5e-040
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 57 KQELNSLKGLRGTENYAH 110
KQ N LKGLRGT+ ++H
Sbjct: 539 KQYFNYLKGLRGTKKHSH 486
Score = 28.6 bits (56), Expect(3) = 2e-052
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = -3 / +1
Query: 112 VCA*FSVPRNPFRELSSCF 56
+C F VPRNP R L CF
Sbjct: 484 LCECFFVPRNPLR*LKYCF 540
Score = 26.3 bits (51), Expect(3) = 5e-040
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 369 GDCRGRGGREE 337
Score = 24.9 bits (48), Expect(2) = 4e-024
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 364 LQRPWREGRT 335
Score = 23.5 bits (45), Expect(3) = 2e-052
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 336 VLPSLHGLCS 365
>gb|CD230488.1|CD230488 SS1_44_B08.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_44_B08_A012 3', mRNA sequence
Length = 503
Score = 173 bits (373), Expect(3) = 2e-045
Identities = 68/70 (97%), Positives = 70/70 (100%)
Frame = -3 / +1
Query: 655 MEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGAT 476
MEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSG+VLVANNVIPAGWNPGAT
Sbjct: 1 MEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGKVLVANNVIPAGWNPGAT 180
Query: 475 YRSLVNYS*L 446
YRSLVNYS*+
Sbjct: 181 YRSLVNYS*I 210
Score = 140 bits (300), Expect(3) = 1e-036
Identities = 61/67 (91%), Positives = 62/67 (92%)
Frame = +3 / -1
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERYVAPGFQPAGMTLLATSTLPESEV RSEKGA SALPVLEL*R SAPQFCTIGV
Sbjct: 203 E*FTRERYVAPGFQPAGMTLLATSTLPESEVRRSEKGALSALPVLEL*RHSAPQFCTIGV 24
Query: 633 HVPHPAS 653
VP PAS
Sbjct: 23 QVPQPAS 3
Score = 90.9 bits (192), Expect(3) = 3e-021
Identities = 37/45 (82%), Positives = 40/45 (88%)
Frame = +2 / -3
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLH 655
EH AGVGG+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH
Sbjct: 135 EHLAGVGGEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLH 1
Score = 27.6 bits (54), Expect(3) = 1e-036
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3 / -3
Query: 60 QELNSLKGLRGTENYAH 110
Q N LKGLRGT+ ++H
Sbjct: 501 QYFNYLKGLRGTKKHSH 451
Score = 27.2 bits (53), Expect(3) = 2e-045
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -1 / +3
Query: 111 CVRSFLYHAILSEN*VPA 58
CV FLYHAIL +N* A
Sbjct: 450 CVSVFLYHAIL*DN*STA 503
Score = 26.3 bits (51), Expect(3) = 1e-036
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 334 GDCRGRGGREE 302
Score = 26.3 bits (51), Expect(3) = 3e-021
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 68 QFSERIAWYRKLRT 109
Q S+RIAWY+K T
Sbjct: 493 QLSQRIAWYKKTLT 452
Score = 24.9 bits (48), Expect(3) = 3e-021
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 329 LQRPWREGRT 300
Score = 23.5 bits (45), Expect(3) = 2e-045
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 301 VLPSLHGLCS 330
>gb|CN128146.1|CN128146 RHOH1_27_G06.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_27_G06_A002 3', mRNA sequence
Length = 524
Score = 172 bits (371), Expect(3) = 5e-045
Identities = 69/78 (88%), Positives = 71/78 (91%)
Frame = -3 / +3
Query: 679 GDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIP 500
GDLSAV LMEAGCGTWTPMVQNWGALW YNSNTGK KAPFS LTSDSG+VLVANNVIP
Sbjct: 3 GDLSAVDLMEAGCGTWTPMVQNWGALWCYNSNTGKGFKAPFSFGLTSDSGKVLVANNVIP 182
Query: 499 AGWNPGATYRSLVNYS*L 446
AGWNPGA YRSLVNYS*+
Sbjct: 183 AGWNPGARYRSLVNYS*I 236
Score = 138 bits (295), Expect(3) = 2e-035
Identities = 60/74 (81%), Positives = 65/74 (87%)
Frame = +3 / -2
Query: 453 E*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGV 632
E*FT+ERY+APGFQPAGMTLLATSTLPESEV +EKGA + LPVLEL* SAPQFCTIGV
Sbjct: 229 E*FTRERYLAPGFQPAGMTLLATSTLPESEVRPNEKGALNPLPVLEL*HHSAPQFCTIGV 50
Query: 633 HVPHPASMRWTALR 674
VP PAS+R TALR
Sbjct: 49 QVPQPASIRSTALR 8
Score = 94.1 bits (199), Expect(3) = 4e-022
Identities = 40/53 (75%), Positives = 44/53 (83%)
Frame = +2 / -1
Query: 521 EHPAGVGGQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVA 679
EH AGVG + EREGRL+ LA VGVVAP+RAPVLHHR P AA GLH+V GAEVA
Sbjct: 161 EHLAGVGSEAEREGRLEPLARVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVA 3
Score = 26.7 bits (52), Expect(3) = 5e-045
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = -1 / +2
Query: 111 CVRSFLYHAILSEN* 67
CV FLYHAIL +N*
Sbjct: 476 CVSVFLYHAIL*DN* 520
Score = 26.3 bits (51), Expect(3) = 2e-035
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +2 / -3
Query: 200 GDCRDRGGSEE 232
GDCR RGG EE
Sbjct: 360 GDCRGRGGREE 328
Score = 26.3 bits (51), Expect(3) = 4e-022
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 69 NSLKGLRGTENYAH 110
N LKGLRGT+ ++H
Sbjct: 518 NYLKGLRGTKKHSH 477
Score = 26.3 bits (51), Expect(3) = 2e-035
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 68 QFSERIAWYRKLRT 109
Q S+RIAWY+K T
Sbjct: 519 QLSQRIAWYKKTLT 478
Score = 24.9 bits (48), Expect(3) = 4e-022
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 205 LQRPWRE*RT 234
LQRPWRE RT
Sbjct: 355 LQRPWREGRT 326
Score = 23.5 bits (45), Expect(3) = 5e-045
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +3
Query: 233 VLHSLHGLCS 204
VL SLHGLCS
Sbjct: 327 VLPSLHGLCS 356
>gb|CF427028.1|CF427028 PH1_3_A04.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_3_A04_A002 3', mRNA sequence
Length = 622
Score = 90.0 bits (190), Expect(3) = 2e-039
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY +VLIEFED DGDL AV LMEAG WTPM NWGA WR N+
Sbjct: 128 ANPFYFDVLIEFEDDDGDLKAVDLMEAGSSVWTPMAHNWGATWRLNN 268
Score = 88.6 bits (187), Expect(3) = 2e-039
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = -3 / +2
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMN 440
N G+ L+APF LRLTSDSGRVLVANN IPA W PG YRSLVNY * +N
Sbjct: 263 NNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGQAYRSLVNYP*KVN 409
Score = 77.1 bits (162), Expect(3) = 4e-033
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2 / -1
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERVR 727
V AP RAPV+ H P AA GLH+VDG EVAV VLELD+H++VERVR
Sbjct: 265 VEAPRRAPVVRHGCPHAAAGLHQVDGLEVAVVVLELDQHVEVERVR 128
Score = 70.7 bits (148), Expect(3) = 4e-033
Identities = 34/49 (69%), Positives = 35/49 (71%)
Frame = +3 / -2
Query: 441 FINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
F Q * TKER PGF AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 408 FTFQG*LTKER*AWPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLL 262
Score = 35.4 bits (71), Expect(3) = 4e-033
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / -3
Query: 188 HTSLGDCRDRGGSEE 232
HTSLGDCRDR G EE
Sbjct: 539 HTSLGDCRDRPGREE 495
Score = 25.8 bits (50), Expect(3) = 2e-039
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 233 VLHSLHGLCSHLVMC 189
VL SL GLCS VMC
Sbjct: 494 VLPSLDGLCSPQVMC 538
>gb|BE361244.1|BE361244 DG1_70_C10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 90.0 bits (190), Expect(3) = 3e-039
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / +1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY +VLIEFED DGDL AV LMEAG WTPM NWGA WR N+
Sbjct: 103 ANPFYFDVLIEFEDDDGDLKAVDLMEAGSSVWTPMAHNWGATWRLNN 243
Score = 88.6 bits (187), Expect(3) = 3e-039
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = -3 / +1
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMN 440
N G+ L+APF LRLTSDSGRVLVANN IPA W PG YRSLVNY * +N
Sbjct: 238 NNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNYP*KVN 384
Score = 77.1 bits (162), Expect(3) = 2e-033
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2 / -1
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERVR 727
V AP RAPV+ H P AA GLH+VDG EVAV VLELD+H++VERVR
Sbjct: 240 VEAPRRAPVVRHGCPHAAAGLHQVDGLEVAVVVLELDQHVEVERVR 103
Score = 71.6 bits (150), Expect(3) = 2e-033
Identities = 34/49 (69%), Positives = 35/49 (71%)
Frame = +3 / -2
Query: 441 FINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
F Q * TKER PGF AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 383 FTFQG*LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLL 237
Score = 35.4 bits (71), Expect(3) = 2e-033
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / -3
Query: 188 HTSLGDCRDRGGSEE 232
HTSLGDCRDR G EE
Sbjct: 514 HTSLGDCRDRPGREE 470
Score = 25.8 bits (50), Expect(3) = 3e-039
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +1
Query: 233 VLHSLHGLCSHLVMC 189
VL SL GLCS VMC
Sbjct: 469 VLPSLDGLCSPQVMC 513
>gb|BG932946.1|BG932946 DG1_69_C11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 698
Score = 90.0 bits (190), Expect(3) = 3e-039
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY +VLIEFED DGDL AV LMEAG WTPM NWGA WR N+
Sbjct: 155 ANPFYFDVLIEFEDDDGDLKAVDLMEAGSSVWTPMAHNWGATWRLNN 295
Score = 88.6 bits (187), Expect(3) = 3e-039
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = -3 / +2
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMN 440
N G+ L+APF LRLTSDSGRVLVANN IPA W PG YRSLVNY * +N
Sbjct: 290 NNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNYP*KVN 436
Score = 77.1 bits (162), Expect(3) = 3e-033
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2 / -2
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERVR 727
V AP RAPV+ H P AA GLH+VDG EVAV VLELD+H++VERVR
Sbjct: 292 VEAPRRAPVVRHGCPHAAAGLHQVDGLEVAVVVLELDQHVEVERVR 155
Score = 71.6 bits (150), Expect(3) = 3e-033
Identities = 34/49 (69%), Positives = 35/49 (71%)
Frame = +3 / -3
Query: 441 FINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
F Q * TKER PGF AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 435 FTFQG*LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLL 289
Score = 35.4 bits (71), Expect(3) = 3e-033
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 188 HTSLGDCRDRGGSEE 232
HTSLGDCRDR G EE
Sbjct: 566 HTSLGDCRDRPGREE 522
Score = 25.8 bits (50), Expect(3) = 3e-039
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 233 VLHSLHGLCSHLVMC 189
VL SL GLCS VMC
Sbjct: 521 VLPSLDGLCSPQVMC 565
>gb|CW450105.1|CW450105 fsbb001f188j04f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f188j04, DNA
sequence
Length = 648
Score = 89.0 bits (188), Expect(3) = 5e-039
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / -3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY +VLIEFED DGDL AV LMEAG WTPM NWGA WR N+
Sbjct: 451 ANPFYFDVLIEFEDDDGDLKAVDLMEAGSSVWTPMALNWGATWRLNN 311
Score = 88.6 bits (187), Expect(3) = 5e-039
Identities = 36/49 (73%), Positives = 39/49 (79%)
Frame = -3 / -3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMN 440
N G+ L+APF LRLTSDSGRVLVANN IPA W PG YRSLVNY * +N
Sbjct: 316 NNGRRLRAPFGLRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNYP*KVN 170
Score = 75.3 bits (158), Expect(3) = 8e-033
Identities = 32/46 (69%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERVR 727
V AP RAPV H P AA GLH+VDG EVAV VLELD+H++VERVR
Sbjct: 314 VEAPRRAPVERHGCPHAAAGLHQVDGLEVAVVVLELDQHVEVERVR 451
Score = 71.6 bits (150), Expect(3) = 8e-033
Identities = 34/49 (69%), Positives = 35/49 (71%)
Frame = +3 / +3
Query: 441 FINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
F Q * TKER PGF AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 171 FTFQG*LTKER*ALPGFHAAGMALLATSTLPESEVSRSPNGALSLLPLL 317
Score = 35.4 bits (71), Expect(3) = 8e-033
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +1
Query: 188 HTSLGDCRDRGGSEE 232
HTSLGDCRDR G EE
Sbjct: 40 HTSLGDCRDRPGREE 84
Score = 25.8 bits (50), Expect(3) = 5e-039
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 233 VLHSLHGLCSHLVMC 189
VL SL GLCS VMC
Sbjct: 85 VLPSLDGLCSPQVMC 41
>gb|CN123868.1|CN123868 RHOH1_1_F04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_1_F04_A002 3', mRNA sequence
Length = 614
Score = 90.0 bits (190), Expect(3) = 8e-039
Identities = 33/47 (70%), Positives = 36/47 (76%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY +VLIEFED DGDL AV LMEAG WTPM NWGA WR N+
Sbjct: 122 ANPFYFDVLIEFEDDDGDLKAVDLMEAGSSVWTPMAHNWGATWRLNN 262
Score = 86.8 bits (183), Expect(3) = 8e-039
Identities = 35/49 (71%), Positives = 38/49 (77%)
Frame = -3 / +2
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMN 440
N G+ L+APF RLTSDSGRVLVANN IPA W PG YRSLVNY * +N
Sbjct: 257 NNGRRLRAPFGFRLTSDSGRVLVANNAIPAAWKPGKAYRSLVNYP*KVN 403
Score = 77.1 bits (162), Expect(3) = 1e-032
Identities = 32/46 (69%), Positives = 37/46 (80%)
Frame = +2 / -2
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERVR 727
V AP RAPV+ H P AA GLH+VDG EVAV VLELD+H++VERVR
Sbjct: 259 VEAPRRAPVVRHGCPHAAAGLHQVDGLEVAVVVLELDQHVEVERVR 122
Score = 70.3 bits (147), Expect(3) = 1e-032
Identities = 33/49 (67%), Positives = 35/49 (71%)
Frame = +3 / -3
Query: 441 FINQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
F Q * TKER PGF AGM LLATSTLPESEVSR+ GA S LP+L
Sbjct: 402 FTFQG*LTKER*ALPGFHAAGMALLATSTLPESEVSRNPNGALSLLPLL 256
Score = 34.1 bits (68), Expect(3) = 1e-032
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = +2 / -1
Query: 188 HTSLGDCRDRGGSEE 232
HTSLGDC+DR G EE
Sbjct: 533 HTSLGDCKDRPGREE 489
Score = 25.8 bits (50), Expect(3) = 8e-039
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / +2
Query: 233 VLHSLHGLCSHLVMC 189
VL SL GLCS VMC
Sbjct: 488 VLPSLDGLCSPQVMC 532
>gb|CD210102.1|CD210102 HS1_57_F11.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_57_F11_A012 3', mRNA sequence
Length = 692
Score = 90.9 bits (192), Expect(2) = 4e-038
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY VLIEFED DGDLSAV LMEAG WTPM NWGA WR N+
Sbjct: 83 ANPFYFNVLIEFEDDDGDLSAVDLMEAGSSVWTPMAHNWGATWRLNN 223
Score = 88.6 bits (187), Expect(2) = 4e-038
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / +2
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNC 437
N G+ L+APF LRLTSDSGRVLVA+N IPA W PG TYRSLVNY * C
Sbjct: 218 NNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNYP*FCCC 367
Score = 75.3 bits (158), Expect(3) = 3e-029
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2 / -2
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERV 724
V AP APV+ H P AA GLH+VDGAEVAV VLELDEH++VERV
Sbjct: 220 VEAPRCAPVVRHGRPHAAAGLHQVDGAEVAVVVLELDEHVEVERV 86
Score = 72.1 bits (151), Expect(3) = 3e-029
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +3 / -3
Query: 447 NQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
NQ * TKER V PG AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 357 NQG*LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLL 217
Score = 23.1 bits (44), Expect(3) = 3e-029
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 161 EKRNRHRPLHTSLGDCRDRGGSEEHT 238
+K N +HTSLG+C + E T
Sbjct: 541 KK*NYSTAVHTSLGECSEAVWREGRT 464
>gb|CW253166.1|CW253166 104_716_11224935_116_35104_054 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11224935, DNA
sequence
Length = 674
Score = 90.9 bits (192), Expect(2) = 4e-038
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -3 / -3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY VLIEFED DGDLSAV LMEAG WTPM NWGA WR N+
Sbjct: 543 ANPFYFNVLIEFEDDDGDLSAVDLMEAGSSVWTPMAHNWGATWRLNN 403
Score = 88.6 bits (187), Expect(2) = 4e-038
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / -3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNC 437
N G+ L+APF LRLTSDSGRVLVA+N IPA W PG TYRSLVNY * C
Sbjct: 408 NNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNYP*FCCC 259
Score = 75.3 bits (158), Expect(3) = 3e-029
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2 / +1
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERV 724
V AP APV+ H P AA GLH+VDGAEVAV VLELDEH++VERV
Sbjct: 406 VEAPRCAPVVRHGRPHAAAGLHQVDGAEVAVVVLELDEHVEVERV 540
Score = 72.1 bits (151), Expect(3) = 3e-029
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +3 / +2
Query: 447 NQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
NQ * TKER V PG AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 269 NQG*LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLL 409
Score = 23.1 bits (44), Expect(3) = 3e-029
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / +1
Query: 161 EKRNRHRPLHTSLGDCRDRGGSEEHT 238
+K N +HTSLG+C + E T
Sbjct: 85 KK*NYSTAVHTSLGECSEAVWREGRT 162
>gb|CW376698.1|CW376698 fsbb001f054l06f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f054l06, DNA
sequence
Length = 588
Score = 90.9 bits (192), Expect(2) = 4e-038
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY VLIEFED DGDLSAV LMEAG WTPM NWGA WR N+
Sbjct: 251 ANPFYFNVLIEFEDDDGDLSAVDLMEAGSSVWTPMAHNWGATWRLNN 391
Score = 88.6 bits (187), Expect(2) = 4e-038
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / +2
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNC 437
N G+ L+APF LRLTSDSGRVLVA+N IPA W PG TYRSLVNY * C
Sbjct: 386 NNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNYP*FCCC 535
Score = 75.3 bits (158), Expect(2) = 2e-028
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2 / -3
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERV 724
V AP APV+ H P AA GLH+VDGAEVAV VLELDEH++VERV
Sbjct: 388 VEAPRCAPVVRHGRPHAAAGLHQVDGAEVAVVVLELDEHVEVERV 254
Score = 72.1 bits (151), Expect(2) = 2e-028
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +3 / -1
Query: 447 NQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
NQ * TKER V PG AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 525 NQG*LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLL 385
>gb|CW480555.1|CW480555 fsbb001f239k22f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f239k22, DNA
sequence
Length = 361
Score = 90.9 bits (192), Expect(2) = 4e-038
Identities = 34/47 (72%), Positives = 36/47 (76%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
+NPFY VLIEFED DGDLSAV LMEAG WTPM NWGA WR N+
Sbjct: 18 ANPFYFNVLIEFEDDDGDLSAVDLMEAGSSVWTPMAHNWGATWRLNN 158
Score = 88.6 bits (187), Expect(2) = 4e-038
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / +3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNC 437
N G+ L+APF LRLTSDSGRVLVA+N IPA W PG TYRSLVNY * C
Sbjct: 153 NNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNYP*FCCC 302
Score = 75.3 bits (158), Expect(2) = 2e-028
Identities = 32/45 (71%), Positives = 36/45 (80%)
Frame = +2 / -3
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVERV 724
V AP APV+ H P AA GLH+VDGAEVAV VLELDEH++VERV
Sbjct: 155 VEAPRCAPVVRHGRPHAAAGLHQVDGAEVAVVVLELDEHVEVERV 21
Score = 72.1 bits (151), Expect(2) = 2e-028
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +3 / -1
Query: 447 NQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
NQ * TKER V PG AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 292 NQG*LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLL 152
>gb|CN128815.1|CN128815 RHOH1_31_F05.g1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_31_F05_A002 5', mRNA sequence
Length = 847
Score = 152 bits (326), Expect = 6e-036
Identities = 59/62 (95%), Positives = 60/62 (96%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 548
SNPFY EVL+EFEDGDGDLSAV LMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR
Sbjct: 660 SNPFYFEVLVEFEDGDGDLSAVDLMEAGCGTWTPMVQNWGALWRYNSNTGKALKAPFSLR 839
Query: 547 LT 542
LT
Sbjct: 840 LT 845
Score = 112 bits (240), Expect = 5e-024
Identities = 48/61 (78%), Positives = 54/61 (88%)
Frame = +2 / -3
Query: 542 GQPEREGRLQRLAGVGVVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQVER 721
G+ EREGRL+RLAGVGVVAP+RAPVLHHR P AA GLH+V GAEVAVAVLEL +HL+VE
Sbjct: 845 GEAEREGRLERLAGVGVVAPQRAPVLHHRRPGAATGLHQVHGAEVAVAVLELHQHLEVEW 666
Query: 722 V 724
V
Sbjct: 665 V 663
>gb|CD229975.1|CD229975 SS1_40_F09.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_40_F09_A012 3', mRNA sequence
Length = 517
Score = 93.6 bits (198), Expect(4) = 1e-035
Identities = 38/50 (76%), Positives = 42/50 (84%)
Frame = -3 / +1
Query: 535 SGRVLVANNVIPAGWNPGATYRSLVNYS*LMNCGGGSVLRPPMHALGWII 386
SG+VLVANNVIPAGWNPGATYRSLVNYS*LMNC GGS+ PP L ++
Sbjct: 1 SGKVLVANNVIPAGWNPGATYRSLVNYS*LMNCAGGSIDLPPRLRLAGLL 150
Score = 84.9 bits (179), Expect(4) = 2e-034
Identities = 36/41 (87%), Positives = 36/41 (87%)
Frame = +3 / -3
Query: 411 GGRRTEPPPQFINQE*FTKERYVAPGFQPAGMTLLATSTLP 533
GGR EPP QFIN E* TKERYVAPGFQPAGMTLLATSTLP
Sbjct: 125 GGRSIEPPAQFIN*E*LTKERYVAPGFQPAGMTLLATSTLP 3
Score = 48.3 bits (99), Expect(4) = 2e-034
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -1
Query: 179 RPLHTSLGDCRDRGGSEEH 235
R LHTSLGDCRDRGGSEEH
Sbjct: 340 RRLHTSLGDCRDRGGSEEH 284
Score = 41.8 bits (85), Expect(4) = 1e-035
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2 / +1
Query: 233 VLHSLHGLCSHLVMC 189
VLHSLHGLCSHLVMC
Sbjct: 286 VLHSLHGLCSHLVMC 330
Score = 38.2 bits (77), Expect(4) = 1e-035
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 404 CAWLDYYAWPRSAFQ 360
CAW DYY WPRSA Q
Sbjct: 131 CAWPDYYGWPRSALQ 175
Score = 35.9 bits (72), Expect(4) = 2e-034
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 50 NKKAGTQFSERIAWYR 97
N+K G QFSERIAWY+
Sbjct: 516 NRKTGVQFSERIAWYK 469
Score = 35.4 bits (71), Expect(4) = 2e-034
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 368 HFLATHNNPAKRMHWG 415
HFLATHNNPAKR G
Sbjct: 167 HFLATHNNPAKRSRGG 120
Score = 35.0 bits (70), Expect(4) = 1e-035
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 94 VPRNPFRELSSCFLV 50
VPRNPFREL+SCF V
Sbjct: 472 VPRNPFRELNSCFPV 516
>gb|CD221661.1|CD221661 CCC1_70_E11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_70_E11_A007 3', mRNA sequence
Length = 561
Score = 88.6 bits (187), Expect(2) = 2e-034
Identities = 36/50 (72%), Positives = 39/50 (78%)
Frame = -3 / +3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNC 437
N G+ L+APF LRLTSDSGRVLVA+N IPA W PG TYRSLVNY * C
Sbjct: 123 NNGRRLRAPFGLRLTSDSGRVLVASNAIPAAWTPGKTYRSLVNYP*FCCC 272
Score = 78.5 bits (165), Expect(2) = 2e-034
Identities = 30/40 (75%), Positives = 31/40 (77%)
Frame = -3 / +3
Query: 706 VLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
VLIEFED DGDLSAV LMEAG WTPM NWGA WR N+
Sbjct: 9 VLIEFEDDDGDLSAVDLMEAGSSVWTPMAHNWGATWRLNN 128
Score = 72.1 bits (151), Expect(3) = 5e-027
Identities = 34/47 (72%), Positives = 35/47 (74%)
Frame = +3 / -3
Query: 447 NQE*FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVL 587
NQ * TKER V PG AGM LLATSTLPESEVSRS GA S LP+L
Sbjct: 262 NQG*LTKER*VLPGVHAAGMALLATSTLPESEVSRSPNGALSLLPLL 122
Score = 67.0 bits (140), Expect(3) = 5e-027
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +2 / -2
Query: 590 VVAPERAPVLHHRGPRAAPGLHEVDGAEVAVAVLELDEHLQ 712
V AP APV+ H P AA GLH+VDGAEVAV VLELDEH++
Sbjct: 125 VEAPRCAPVVRHGRPHAAAGLHQVDGAEVAVVVLELDEHVE 3
Score = 23.1 bits (44), Expect(3) = 5e-027
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +2 / -2
Query: 161 EKRNRHRPLHTSLGDCRDRGGSEEHT 238
+K N +HTSLG+C + E T
Sbjct: 446 KK*NYSTAVHTSLGECSEAVWREGRT 369
>gb|BI099614.1|BI099614 IP1_44_E02.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 508
Score = 88.1 bits (186), Expect(4) = 4e-034
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -3 / +1
Query: 526 VLVANNVIPAGWNPGATYRSLVNYS*LMNCGGGSVLRPPMHALGWII 386
VLVANNVIPAGWNPGATYRSLVNYS*LMNC GGS+ PP L ++
Sbjct: 1 VLVANNVIPAGWNPGATYRSLVNYS*LMNCAGGSIDLPPRLRLAGLL 141
Score = 76.2 bits (160), Expect(4) = 5e-032
Identities = 32/38 (84%), Positives = 33/38 (86%)
Frame = +3 / -3
Query: 411 GGRRTEPPPQFINQE*FTKERYVAPGFQPAGMTLLATS 524
GGR EPP QFIN E* T+ERYVAPGFQPAGMTLLATS
Sbjct: 116 GGRSIEPPAQFIN*E*LTRERYVAPGFQPAGMTLLATS 3
Score = 48.3 bits (99), Expect(4) = 5e-032
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -1
Query: 179 RPLHTSLGDCRDRGGSEEH 235
R LHTSLGDCRDRGGSEEH
Sbjct: 331 RRLHTSLGDCRDRGGSEEH 275
Score = 41.8 bits (85), Expect(4) = 4e-034
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2 / +1
Query: 233 VLHSLHGLCSHLVMC 189
VLHSLHGLCSHLVMC
Sbjct: 277 VLHSLHGLCSHLVMC 321
Score = 38.2 bits (77), Expect(4) = 4e-034
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 404 CAWLDYYAWPRSAFQ 360
CAW DYY WPRSA Q
Sbjct: 122 CAWPDYYGWPRSALQ 166
Score = 35.9 bits (72), Expect(4) = 5e-032
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2 / -2
Query: 50 NKKAGTQFSERIAWYR 97
N+K G QFSERIAWY+
Sbjct: 507 NRKTGVQFSERIAWYK 460
Score = 35.4 bits (71), Expect(4) = 5e-032
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 368 HFLATHNNPAKRMHWG 415
HFLATHNNPAKR G
Sbjct: 158 HFLATHNNPAKRSRGG 111
Score = 35.0 bits (70), Expect(4) = 4e-034
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 94 VPRNPFRELSSCFLV 50
VPRNPFREL+SCF V
Sbjct: 463 VPRNPFRELNSCFPV 507
>gb|CW417495.1|CW417495 fsbb001f120i17f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f120i17, DNA
sequence
Length = 752
Score = 111 bits (236), Expect(2) = 4e-033
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / +2
Query: 640 GTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLV 461
G WTPM +WGA+WR NSNTGK L+APFS+RL S SG+VLV N IPAGW G TY S V
Sbjct: 311 GAWTPMQHSWGAMWRANSNTGKPLRAPFSVRLISGSGKVLVVRNAIPAGWRAGMTYWSTV 490
Query: 460 NYS 452
NY+
Sbjct: 491 NYA 499
Score = 90.9 bits (192), Expect(2) = 7e-022
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +3 / -3
Query: 456 *FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGVH 635
*FT ++YV P QPAGM L TSTLPE E+SR+E GA S LPVLEL R AP C IGVH
Sbjct: 495 *FTVDQYVIPARQPAGMAFLTTSTLPEPEMSRTENGARSGLPVLELARHMAPHECCIGVH 316
Query: 636 VP 641
P
Sbjct: 315 AP 310
Score = 51.9 bits (107), Expect(2) = 4e-033
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAG 644
SNPFYL VLI++ +GDGDL+AVH+M+ G
Sbjct: 227 SNPFYLAVLIQYLNGDGDLAAVHIMQQG 310
Score = 34.1 bits (68), Expect(2) = 7e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / -2
Query: 650 LHEVDGAEVAVAVLELDEHLQVERV 724
LH+V EV VAV LD+H +VERV
Sbjct: 304 LHDVHRGEVTVAVQVLDQHGEVERV 230
>gb|CW417496.1|CW417496 fsbb001f120i17k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f120i17, DNA
sequence
Length = 725
Score = 111 bits (236), Expect(2) = 4e-033
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / -1
Query: 640 GTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLV 461
G WTPM +WGA+WR NSNTGK L+APFS+RL S SG+VLV N IPAGW G TY S V
Sbjct: 632 GAWTPMQHSWGAMWRANSNTGKPLRAPFSVRLISGSGKVLVVRNAIPAGWRAGMTYWSTV 453
Query: 460 NYS 452
NY+
Sbjct: 452 NYA 444
Score = 90.9 bits (192), Expect(2) = 7e-022
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +3 / +1
Query: 456 *FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGVH 635
*FT ++YV P QPAGM L TSTLPE E+SR+E GA S LPVLEL R AP C IGVH
Sbjct: 448 *FTVDQYVIPARQPAGMAFLTTSTLPEPEMSRTENGARSGLPVLELARHMAPHECCIGVH 627
Query: 636 VP 641
P
Sbjct: 628 AP 633
Score = 51.9 bits (107), Expect(2) = 4e-033
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -3 / -1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAG 644
SNPFYL VLI++ +GDGDL+AVH+M+ G
Sbjct: 716 SNPFYLAVLIQYLNGDGDLAAVHIMQQG 633
Score = 34.1 bits (68), Expect(2) = 7e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 650 LHEVDGAEVAVAVLELDEHLQVERV 724
LH+V EV VAV LD+H +VERV
Sbjct: 639 LHDVHRGEVTVAVQVLDQHGEVERV 713
>gb|CW428522.1|CW428522 fsbb001f141e10k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f141e10, DNA
sequence
Length = 687
Score = 111 bits (236), Expect(2) = 4e-033
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / -2
Query: 640 GTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLV 461
G WTPM +WGA+WR NSNTGK L+APFS+RL S SG+VLV N IPAGW G TY S V
Sbjct: 398 GAWTPMQHSWGAMWRANSNTGKPLRAPFSVRLISGSGKVLVVRNAIPAGWRAGMTYWSTV 219
Query: 460 NYS 452
NY+
Sbjct: 218 NYA 210
Score = 90.9 bits (192), Expect(2) = 7e-022
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +3 / +1
Query: 456 *FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGVH 635
*FT ++YV P QPAGM L TSTLPE E+SR+E GA S LPVLEL R AP C IGVH
Sbjct: 214 *FTVDQYVIPARQPAGMAFLTTSTLPEPEMSRTENGARSGLPVLELARHMAPHECCIGVH 393
Query: 636 VP 641
P
Sbjct: 394 AP 399
Score = 51.9 bits (107), Expect(2) = 4e-033
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -3 / -2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAG 644
SNPFYL VLI++ +GDGDL+AVH+M+ G
Sbjct: 482 SNPFYLAVLIQYLNGDGDLAAVHIMQQG 399
Score = 34.1 bits (68), Expect(2) = 7e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / +3
Query: 650 LHEVDGAEVAVAVLELDEHLQVERV 724
LH+V EV VAV LD+H +VERV
Sbjct: 405 LHDVHRGEVTVAVQVLDQHGEVERV 479
>gb|CW140343.1|CW140343 104_530_11135731_148_34916_066 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11135731, DNA
sequence
Length = 562
Score = 111 bits (236), Expect(2) = 4e-033
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / -1
Query: 640 GTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLV 461
G WTPM +WGA+WR NSNTGK L+APFS+RL S SG+VLV N IPAGW G TY S V
Sbjct: 328 GAWTPMQHSWGAMWRANSNTGKPLRAPFSVRLISGSGKVLVVRNAIPAGWRAGMTYWSTV 149
Query: 460 NYS 452
NY+
Sbjct: 148 NYA 140
Score = 90.9 bits (192), Expect(2) = 7e-022
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +3 / +3
Query: 456 *FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGVH 635
*FT ++YV P QPAGM L TSTLPE E+SR+E GA S LPVLEL R AP C IGVH
Sbjct: 144 *FTVDQYVIPARQPAGMAFLTTSTLPEPEMSRTENGARSGLPVLELARHMAPHECCIGVH 323
Query: 636 VP 641
P
Sbjct: 324 AP 329
Score = 51.9 bits (107), Expect(2) = 4e-033
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -3 / -1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAG 644
SNPFYL VLI++ +GDGDL+AVH+M+ G
Sbjct: 412 SNPFYLAVLIQYLNGDGDLAAVHIMQQG 329
Score = 34.1 bits (68), Expect(2) = 7e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / +2
Query: 650 LHEVDGAEVAVAVLELDEHLQVERV 724
LH+V EV VAV LD+H +VERV
Sbjct: 335 LHDVHRGEVTVAVQVLDQHGEVERV 409
>gb|BG048512.1|BG048512 OV1_14_E03.g2_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 547
Score = 85.4 bits (180), Expect(2) = 9e-033
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = -3 / +1
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNYS 452
N+G AL+APFS+RLTS SGR +VA NVIPAGW+PGATYRS+VN++
Sbjct: 220 NSGAALQAPFSVRLTSGSGRTVVATNVIPAGWSPGATYRSVVNFN 354
Score = 76.2 bits (160), Expect(2) = 9e-033
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = -3 / +1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SN YL VLIE+E GDG+L +V LM+ G W PM ++WGA+WRYNS
Sbjct: 85 SNANYLPVLIEYESGDGELRSVELMQRGGAAWAPMQRSWGAVWRYNS 225
>gb|CX607987.1|CX607987 ANR1_32_A06.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_32_A06_A002 3', mRNA sequence
Length = 586
Score = 108 bits (231), Expect(2) = 2e-032
Identities = 41/63 (65%), Positives = 48/63 (76%)
Frame = -3 / +2
Query: 640 GTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLV 461
G WTPM +WGA+WR +SNTGK L+APFS+RL S SG+VLV N IPAGW G TY S V
Sbjct: 137 GAWTPMQHSWGAMWRASSNTGKPLRAPFSVRLISGSGKVLVVRNAIPAGWRAGMTYWSTV 316
Query: 460 NYS 452
NY+
Sbjct: 317 NYA 325
Score = 90.9 bits (192), Expect(2) = 7e-022
Identities = 40/62 (64%), Positives = 44/62 (70%)
Frame = +3 / -2
Query: 456 *FTKERYVAPGFQPAGMTLLATSTLPESEVSRSEKGAFSALPVLEL*RQSAPQFCTIGVH 635
*FT ++YV P QPAGM L TSTLPE E+SR+E GA S LPVLEL R AP C IGVH
Sbjct: 321 *FTVDQYVIPARQPAGMAFLTTSTLPEPEMSRTENGARSGLPVLELARHMAPHECCIGVH 142
Query: 636 VP 641
P
Sbjct: 141 AP 136
Score = 51.9 bits (107), Expect(2) = 2e-032
Identities = 19/28 (67%), Positives = 25/28 (89%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAG 644
SNPFYL VLI++ +GDGDL+AVH+M+ G
Sbjct: 53 SNPFYLAVLIQYLNGDGDLAAVHIMQQG 136
Score = 34.1 bits (68), Expect(2) = 7e-022
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2 / -1
Query: 650 LHEVDGAEVAVAVLELDEHLQVERV 724
LH+V EV VAV LD+H +VERV
Sbjct: 130 LHDVHRGEVTVAVQVLDQHGEVERV 56
>gb|BG159238.1|BG159238 OV2_5_B04.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 445
Score = 98.2 bits (208), Expect(3) = 2e-032
Identities = 40/52 (76%), Positives = 44/52 (84%)
Frame = -3 / +1
Query: 541 SDSGRVLVANNVIPAGWNPGATYRSLVNYS*LMNCGGGSVLRPPMHALGWII 386
SDSG+VLVANNVIPAGWNPGATYRSLVNYS*LMNC GGS+ PP L ++
Sbjct: 1 SDSGKVLVANNVIPAGWNPGATYRSLVNYS*LMNCAGGSIDLPPRLRLAGLL 156
Score = 87.7 bits (185), Expect(3) = 6e-030
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = +3 / -3
Query: 411 GGRRTEPPPQFINQE*FTKERYVAPGFQPAGMTLLATSTLPES 539
GGR EPP QFIN E* T+ERYVAPGFQPAGMTLLATSTLPES
Sbjct: 131 GGRSIEPPAQFIN*E*LTRERYVAPGFQPAGMTLLATSTLPES 3
Score = 48.3 bits (99), Expect(3) = 6e-030
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2 / -1
Query: 179 RPLHTSLGDCRDRGGSEEH 235
R LHTSLGDCRDRGGSEEH
Sbjct: 346 RRLHTSLGDCRDRGGSEEH 290
Score = 41.8 bits (85), Expect(3) = 2e-032
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2 / +1
Query: 233 VLHSLHGLCSHLVMC 189
VLHSLHGLCSHLVMC
Sbjct: 292 VLHSLHGLCSHLVMC 336
Score = 38.2 bits (77), Expect(3) = 2e-032
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +2
Query: 404 CAWLDYYAWPRSAFQ 360
CAW DYY WPRSA Q
Sbjct: 137 CAWPDYYGWPRSALQ 181
Score = 35.4 bits (71), Expect(3) = 6e-030
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +2 / -3
Query: 368 HFLATHNNPAKRMHWG 415
HFLATHNNPAKR G
Sbjct: 173 HFLATHNNPAKRSRGG 126
>gb|CW454420.1|CW454420 fsbb001f198n16k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f198n16, DNA
sequence
Length = 408
Score = 111 bits (236), Expect(2) = 5e-029
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = -3 / -3
Query: 640 GTWTPMVQNWGALWRYNSNTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLV 461
G WTPM +WGA+WR NSNTGK L+APFS+RL S SG+VLV N IPAGW G TY S V
Sbjct: 337 GAWTPMQHSWGAMWRANSNTGKPLRAPFSVRLISGSGKVLVVRNAIPAGWRAGMTYWSTV 158
Query: 460 NYS 452
NY+
Sbjct: 157 NYA 149
Score = 38.2 bits (77), Expect(2) = 5e-029
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -3 / -3
Query: 712 LEVLIEFEDGDGDLSAVHLMEAG 644
L VLI++ +GDGDL+AVH+M+ G
Sbjct: 406 LAVLIQYLNGDGDLAAVHIMQQG 338
>gb|BQ479087.1|BQ479087 pRC-1199 pRC Sorghum halepense cDNA 5', mRNA sequence
Length = 834
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 247 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 387
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +1
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 382 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 513
>gb|CN134421.1|CN134421 OX1_26_F05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_26_F05_A002 3', mRNA sequence
Length = 832
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 288 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 428
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 423 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 554
>gb|DN551914.1|DN551914 pSPR-RT-MR-H2_C06_C282 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 801
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / -3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 571 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 431
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / -3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 436 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 305
>gb|CW039699.1|CW039699 104_272_10505645_115_30390 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10505645, DNA
sequence
Length = 750
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / -1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 648 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 508
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / -1
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 513 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 382
>gb|CW171385.1|CW171385 104_582_11155714_116_36532_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11155714, DNA
sequence
Length = 689
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / -3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 300 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 160
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / -3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 165 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 34
>gb|CW321278.1|CW321278 104_814_11475462_116_35933_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475462, DNA
sequence
Length = 678
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 74 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 214
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +2
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 209 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 340
>gb|CW177756.1|CW177756 104_591_11159198_116_36610_059 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11159198, DNA
sequence
Length = 665
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 252 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 392
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 387 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 518
>gb|CW256801.1|CW256801 104_722_11226991_148_35148_032 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11226991, DNA
sequence
Length = 651
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / -1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 591 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 451
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / -1
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 456 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 325
>gb|BE356370.1|BE356370 DG1_124_G10.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 650
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +2
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 131 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 271
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +2
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 266 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 397
>gb|BG049318.1|BG049318 OV1_18_D11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 638
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 105 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 245
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 240 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 371
>gb|CD223757.1|CD223757 CCC1_30_D11.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_30_D11_A007 3', mRNA sequence
Length = 615
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +1
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 67 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 207
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +1
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 202 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 333
>gb|CD227380.1|CD227380 CCC1_51_H01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_51_H01_A007 3', mRNA sequence
Length = 616
Score = 81.7 bits (172), Expect(2) = 6e-029
Identities = 29/47 (61%), Positives = 37/47 (78%)
Frame = -3 / +3
Query: 727 SNPFYLEVLIEFEDGDGDLSAVHLMEAGCGTWTPMVQNWGALWRYNS 587
SNP Y VL+EFEDGDGD+ V LMEA G+WTPM ++WG++WR +S
Sbjct: 69 SNPVYFAVLVEFEDGDGDVVQVDLMEANSGSWTPMRESWGSIWRLDS 209
Score = 67.0 bits (140), Expect(2) = 6e-029
Identities = 26/44 (59%), Positives = 33/44 (75%)
Frame = -3 / +3
Query: 586 NTGKALKAPFSLRLTSDSGRVLVANNVIPAGWNPGATYRSLVNY 455
++G L APFSLR+T++SG+ LVAN VIPA W P YRS+V Y
Sbjct: 204 DSGHRLTAPFSLRITNESGKTLVANQVIPANWVPNTYYRSIVQY 335
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 743,861,676
Number of Sequences: 832831
Number of extensions: 10316074
Number of successful extensions: 90258
Number of sequences better than 1.0e-020: 127
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 22336972216
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)