TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2477970.2.1
(699 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CL173357.1|CL173357 104_376_10890821_116_31795_341 Sorgh... 344 e-126
gb|CX616425.1|CX616425 GABR1_27_G06.g1_A002 GA- or brassino... 342 e-125
gb|CN146570.1|CN146570 WOUND1_42_C10.b1_A002 Wounded leaves... 341 e-122
gb|CW159606.1|CW159606 104_565_11149446_148_36405_017 Sorgh... 325 e-117
gb|AW678009.1|AW678009 WS1_12_F02.g1_A002 Water-stressed 1 ... 335 e-117
gb|CX616334.1|CX616334 GABR1_27_G06.b1_A002 GA- or brassino... 298 e-109
gb|AW924657.1|AW924657 WS1_71_H07.b1_A002 Water-stressed 1 ... 344 e-108
gb|BE600562.1|BE600562 PI1_94_F10.b1_A002 Pathogen induced ... 344 e-107
gb|CD232053.1|CD232053 SS1_31_B03.g1_A012 Salt-stressed see... 338 e-105
gb|AW678984.1|AW678984 WS1_21_E05.g1_A002 Water-stressed 1 ... 287 e-103
gb|BE363844.1|BE363844 WS1_71_H07.g2_A002 Water-stressed 1 ... 344 5e-095
gb|BE600297.1|BE600297 PI1_94_F10.g1_A002 Pathogen induced ... 338 6e-092
gb|CF486980.1|CF486980 POL1_41_B06.b1_A002 Pollen Sorghum b... 237 1e-087
gb|CW365606.1|CW365606 fsbb001f038d13k0 Sorghum methylation... 232 3e-085
gb|CF486277.1|CF486277 POL1_36_G01.g1_A002 Pollen Sorghum b... 296 1e-081
gb|BG240485.1|BG240485 OV1_30_F04.b1_A002 Ovary 1 (OV1) Sor... 291 4e-080
gb|CN146627.1|CN146627 WOUND1_42_C10.g1_A002 Wounded leaves... 296 3e-079
gb|CF486193.1|CF486193 POL1_36_G01.b1_A002 Pollen Sorghum b... 202 7e-079
gb|CW275294.1|CW275294 104_748_11404885_116_35380_055 Sorgh... 215 4e-055
gb|CL173358.1|CL173358 104_376_10890821_148_31794_341 Sorgh... 122 1e-031
>gb|CL173357.1|CL173357 104_376_10890821_116_31795_341 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890821, DNA
sequence
Length = 746
Score = 344 bits (745), Expect(4) = e-126
Identities = 137/140 (97%), Positives = 139/140 (99%)
Frame = +2 / -3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 687 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 508
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP
Sbjct: 507 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 328
Query: 395 PKPIVVKAKLISKVAEKKIK 454
PKPIVVKAKLISKVAEKKIK
Sbjct: 327 PKPIVVKAKLISKVAEKKIK 268
Score = 339 bits (735), Expect(3) = e-104
Identities = 145/189 (76%), Positives = 149/189 (78%)
Frame = -1 / +2
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 116 TGSSHRFKNYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 295
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQRRSMLTAGQ*NL
Sbjct: 296 MSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NL 475
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFF 67
LRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFF
Sbjct: 476 LRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFF 655
Query: 66 LKRVVIAAA 40
LKRVVIAAA
Sbjct: 656 LKRVVIAAA 682
Score = 146 bits (314), Expect(4) = 1e-067
Identities = 71/119 (59%), Positives = 74/119 (62%)
Frame = -3 / +1
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 328 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 507
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 508 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 684
Score = 126 bits (270), Expect(4) = 2e-054
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1 / -2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 370 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 191
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PVV K V AC
Sbjct: 190 TSSAFLSQLFVLRRPVVFKSVAAAC 116
Score = 124 bits (266), Expect(3) = 9e-043
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / +3
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 435 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 587
Score = 107 bits (229), Expect(4) = 1e-067
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / +1
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 112 PNRQQPQI*KLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 261
Score = 101 bits (215), Expect(4) = e-126
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3 / -1
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTCSF ICG CL G +
Sbjct: 242 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCSF*ICGCCLLGQCF 102
Score = 90.0 bits (190), Expect(4) = 2e-054
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / -2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 595 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 434
Score = 64.8 bits (135), Expect(3) = 9e-043
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / +3
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 111 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 233
Score = 45.5 bits (93), Expect(3) = e-104
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = -1 / +3
Query: 690 STTDS*DRFN*CEIFDMNWHQKPHK 616
S T S D FN EIFDMNWHQ PHK
Sbjct: 30 SRTISTDSFNISEIFDMNWHQNPHK 104
Score = 36.8 bits (74), Expect(4) = e-126
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1 / -1
Query: 619 MRFLMPVHIKYFTSIKSILA 678
MR LMPVHIKYF IK+I A
Sbjct: 101 MRILMPVHIKYFRYIKAICA 42
Score = 35.9 bits (72), Expect(3) = e-104
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / +2
Query: 46 RRRLTWAAPGRGE 8
RRRLTWAAPGRGE
Sbjct: 686 RRRLTWAAPGRGE 724
Score = 31.3 bits (62), Expect(4) = 1e-067
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +1
Query: 44 PPTYLGSTWEG 12
PPTYLGS WEG
Sbjct: 688 PPTYLGSAWEG 720
Score = 29.5 bits (58), Expect(4) = 1e-067
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = -2 / +1
Query: 692 LAQLIARIDLIDVKYLI*TGIK 627
+ + +A+I LI +KYLI*TGIK
Sbjct: 28 IVEQLAQIALIYLKYLI*TGIK 93
Score = 29.0 bits (57), Expect(4) = 2e-054
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3 / -3
Query: 618 YAVFDASSYQIFHIN*IY 671
Y FDASSYQIF I * Y
Sbjct: 102 YEDFDASSYQIFQIY*SY 49
Score = 29.0 bits (57), Expect(4) = e-126
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / -2
Query: 2 LPLPPPRCCPGKSAAA 49
L PPR CPGKSAA+
Sbjct: 730 LHFSPPRRCPGKSAAS 683
Score = 26.7 bits (52), Expect(3) = 9e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / +3
Query: 45 AADLPGQHLGG 13
AADLPGQ LGG
Sbjct: 687 AADLPGQRLGG 719
Score = 25.4 bits (49), Expect(4) = 2e-054
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / -1
Query: 13 PSQVLPR*VGG 45
PSQ LPR*VGG
Sbjct: 719 PSQALPR*VGG 687
>gb|CX616425.1|CX616425 GABR1_27_G06.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_G06_A002 5', mRNA sequence
Length = 710
Score = 342 bits (741), Expect(4) = e-125
Identities = 136/140 (97%), Positives = 138/140 (98%)
Frame = +2 / +3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 45 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 224
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQID TQFGYFKVLGKGVLP
Sbjct: 225 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDATQFGYFKVLGKGVLP 404
Query: 395 PKPIVVKAKLISKVAEKKIK 454
PKPIVVKAKLISKVAEKKIK
Sbjct: 405 PKPIVVKAKLISKVAEKKIK 464
Score = 337 bits (730), Expect(3) = e-102
Identities = 144/189 (76%), Positives = 148/189 (78%)
Frame = -1 / -2
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 616 TGSSHRFKNYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 437
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCV SICG S GT+DQRRSMLTAGQ*NL
Sbjct: 436 MSLALTTMGLGGSTPFPSTLK*PNCVASICGALSPPASAALSAGTMDQRRSMLTAGQ*NL 257
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFF 67
LRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFF
Sbjct: 256 LRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFF 77
Query: 66 LKRVVIAAA 40
LKRVVIAAA
Sbjct: 76 LKRVVIAAA 50
Score = 143 bits (307), Expect(4) = 1e-066
Identities = 70/119 (58%), Positives = 73/119 (61%)
Frame = -3 / -1
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELR +D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 404 RQHPLPEHLEVAELRGIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 225
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 224 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 48
Score = 126 bits (270), Expect(4) = 3e-055
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 362 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 541
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PVV K V AC
Sbjct: 542 TSSAFLSQLFVLRRPVVFKSVAAAC 616
Score = 124 bits (266), Expect(3) = 8e-043
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 297 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 145
Score = 107 bits (229), Expect(4) = 1e-066
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / -1
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 620 PNRQQPQI*KLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 471
Score = 101 bits (215), Expect(4) = e-125
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3 / +1
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTCSF ICG CL G +
Sbjct: 490 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCSF*ICGCCLLGQCF 630
Score = 90.0 bits (190), Expect(4) = 3e-055
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 137 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 298
Score = 64.8 bits (135), Expect(3) = 8e-043
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 621 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 499
Score = 43.2 bits (88), Expect(3) = e-102
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -1 / -3
Query: 672 DRFN*CEIFDMNWHQKPHK 616
D FN EIFDMNWHQ PHK
Sbjct: 684 DSFNISEIFDMNWHQNPHK 628
Score = 36.8 bits (74), Expect(4) = e-125
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 619 MRFLMPVHIKYFTSIKSILA 678
MR LMPVHIKYF IK+I A
Sbjct: 631 MRILMPVHIKYFRYIKAICA 690
Score = 33.1 bits (66), Expect(3) = e-102
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = -3 / -2
Query: 46 RRRLTWAAPGRGEWK 2
RRRLTWAAPG +W+
Sbjct: 46 RRRLTWAAPGGEKWR 2
Score = 32.2 bits (64), Expect(4) = 1e-066
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -2 / -1
Query: 44 PPTYLGSTWEGGVE 3
PPTYLGS W G VE
Sbjct: 44 PPTYLGSAWRGEVE 3
Score = 29.0 bits (57), Expect(4) = 3e-055
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3 / +3
Query: 618 YAVFDASSYQIFHIN*IY 671
Y FDASSYQIF I * Y
Sbjct: 630 YEDFDASSYQIFQIY*SY 683
Score = 28.6 bits (56), Expect(4) = 1e-066
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 680 IARIDLIDVKYLI*TGIK 627
+A+I LI +KYLI*TGIK
Sbjct: 692 LAQIALIYLKYLI*TGIK 639
Score = 28.6 bits (56), Expect(4) = e-125
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 5 PLPPPRCCPGKSAAA 49
PL P R CPGKSAA+
Sbjct: 5 PLLPSRRCPGKSAAS 49
Score = 28.1 bits (55), Expect(4) = 3e-055
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +1 / +1
Query: 1 ASTPPSQVLPR*VGG 45
AST P Q LPR*VGG
Sbjct: 1 ASTSPLQALPR*VGG 45
Score = 26.7 bits (52), Expect(3) = 8e-043
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 45 AADLPGQHLGGGSG 4
AADLPGQ L G SG
Sbjct: 45 AADLPGQRLEGRSG 4
>gb|CN146570.1|CN146570 WOUND1_42_C10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_42_C10_A002 3', mRNA sequence
Length = 688
Score = 341 bits (738), Expect(4) = e-122
Identities = 136/140 (97%), Positives = 138/140 (98%)
Frame = +2 / +3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 63 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 242
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRNKFYCPAVNIER WSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP
Sbjct: 243 VGMRYFHKLRNKFYCPAVNIERPWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 422
Query: 395 PKPIVVKAKLISKVAEKKIK 454
PKPIVVKAKLISKVAEKKIK
Sbjct: 423 PKPIVVKAKLISKVAEKKIK 482
Score = 332 bits (719), Expect(3) = 7e-099
Identities = 143/189 (75%), Positives = 147/189 (77%)
Frame = -1 / -1
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F YR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 634 TGSSHRFKIYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 455
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQ RSMLTAGQ*NL
Sbjct: 454 MSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQGRSMLTAGQ*NL 275
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFF 67
LRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFF
Sbjct: 274 LRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFF 95
Query: 66 LKRVVIAAA 40
LKRVVIAAA
Sbjct: 94 LKRVVIAAA 68
Score = 141 bits (303), Expect(4) = 3e-063
Identities = 69/119 (57%), Positives = 73/119 (61%)
Frame = -3 / -3
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH P ALDVDRGAVELVAEL+EVTHA+
Sbjct: 422 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPGALDVDRGAVELVAELVEVTHAD 243
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVE+D TSRVLPVLAD AR HRRRR
Sbjct: 242 LAEVTRMVLVEKDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 66
Score = 123 bits (263), Expect(4) = 9e-053
Identities = 57/85 (67%), Positives = 60/85 (70%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 380 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 559
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PV K V AC
Sbjct: 560 TSSAFLSQLFVLRRPVNFKSVAAAC 634
Score = 123 bits (263), Expect(3) = 2e-041
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = -2 / -2
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCR+G GGGACHRRYRDLP
Sbjct: 315 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRKGCGGGACHRRYRDLP 163
Score = 105 bits (224), Expect(4) = 3e-063
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -3 / -3
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I LQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 638 PNRQQPQI*NLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 489
Score = 99.6 bits (211), Expect(4) = e-122
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3 / +1
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTC F ICG CL G +
Sbjct: 508 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCKF*ICGCCLLGQCF 648
Score = 88.1 bits (186), Expect(4) = 9e-053
Identities = 37/54 (68%), Positives = 38/54 (70%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+P RQVPS LLRQG H RGQHRAPLV
Sbjct: 155 EAPGRSR*RRWHAPPPHPFRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 316
Score = 61.6 bits (128), Expect(3) = 2e-041
Identities = 29/41 (70%), Positives = 31/41 (75%)
Frame = -2 / -2
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T K TG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 639 SQQAAATDLKFTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 517
Score = 35.9 bits (72), Expect(3) = 7e-099
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / -1
Query: 46 RRRLTWAAPGRGE 8
RRRLTWAAPGRGE
Sbjct: 64 RRRLTWAAPGRGE 26
Score = 33.6 bits (67), Expect(3) = 7e-099
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -1 / -2
Query: 654 EIFDMNWHQKPHK 616
EIFDMNWHQ P K
Sbjct: 684 EIFDMNWHQNPFK 646
Score = 31.3 bits (62), Expect(4) = 3e-063
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 44 PPTYLGSTWEG 12
PPTYLGS WEG
Sbjct: 62 PPTYLGSAWEG 30
Score = 29.0 bits (57), Expect(4) = e-122
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 2 LPLPPPRCCPGKSAAA 49
L PPR CPGKSAA+
Sbjct: 20 LHFSPPRRCPGKSAAS 67
Score = 28.6 bits (56), Expect(4) = e-122
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 617 LCGF*CQFISNIS 655
L GF*CQFISNIS
Sbjct: 647 LKGF*CQFISNIS 685
Score = 28.1 bits (55), Expect(4) = 9e-053
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 622 RFLMPVHIKYF 654
R LMPVHIKYF
Sbjct: 652 RILMPVHIKYF 684
Score = 26.7 bits (52), Expect(3) = 2e-041
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -2
Query: 45 AADLPGQHLGG 13
AADLPGQ LGG
Sbjct: 63 AADLPGQRLGG 31
Score = 25.4 bits (49), Expect(4) = 9e-053
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 13 PSQVLPR*VGG 45
PSQ LPR*VGG
Sbjct: 31 PSQALPR*VGG 63
Score = 22.1 bits (42), Expect(4) = 3e-063
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -2 / -3
Query: 656 VKYLI*TGIK 627
+KYLI*TGIK
Sbjct: 686 LKYLI*TGIK 657
>gb|CW159606.1|CW159606 104_565_11149446_148_36405_017 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11149446, DNA
sequence
Length = 723
Score = 325 bits (704), Expect(3) = e-117
Identities = 129/130 (99%), Positives = 129/130 (99%)
Frame = +2 / +1
Query: 65 KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLR 244
KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLR
Sbjct: 1 KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLR 180
Query: 245 NKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKL 424
NKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKL
Sbjct: 181 NKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKL 360
Query: 425 ISKVAEKKIK 454
ISKVAEKKIK
Sbjct: 361 ISKVAEKKIK 390
Score = 322 bits (697), Expect(2) = 2e-094
Identities = 136/180 (75%), Positives = 140/180 (77%)
Frame = -1 / -2
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 542 TGSSHRFKNYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 363
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQRRSMLTAGQ*NL
Sbjct: 362 MSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NL 183
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFF 67
LRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFF
Sbjct: 182 LRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFF 3
Score = 138 bits (297), Expect(3) = 4e-061
Identities = 64/94 (68%), Positives = 67/94 (71%)
Frame = -3 / -1
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 330 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 151
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLAD 113
LAEV RMVLVEED TSRVLPVLAD
Sbjct: 150 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLAD 49
Score = 126 bits (270), Expect(3) = 3e-052
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1 / +3
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 288 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 467
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PVV K V AC
Sbjct: 468 TSSAFLSQLFVLRRPVVFKSVAAAC 542
Score = 124 bits (266), Expect(2) = 2e-040
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 223 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 71
Score = 107 bits (229), Expect(3) = 4e-061
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / -1
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 546 PNRQQPQI*KLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 397
Score = 101 bits (215), Expect(3) = e-117
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3 / +2
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTCSF ICG CL G +
Sbjct: 416 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCSF*ICGCCLLGQCF 556
Score = 90.0 bits (190), Expect(3) = 3e-052
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +3
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 63 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 224
Score = 64.8 bits (135), Expect(2) = 2e-040
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 547 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 425
Score = 45.5 bits (93), Expect(2) = 2e-094
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = -1 / -3
Query: 690 STTDS*DRFN*CEIFDMNWHQKPHK 616
S T S D FN EIFDMNWHQ PHK
Sbjct: 628 SRTISTDSFNISEIFDMNWHQNPHK 554
Score = 36.8 bits (74), Expect(3) = e-117
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 619 MRFLMPVHIKYFTSIKSILA 678
MR LMPVHIKYF IK+I A
Sbjct: 557 MRILMPVHIKYFRYIKAICA 616
Score = 29.0 bits (57), Expect(3) = 3e-052
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 618 YAVFDASSYQIFHIN*IY 671
Y FDASSYQIF I * Y
Sbjct: 556 YEDFDASSYQIFQIY*SY 609
Score = 28.6 bits (56), Expect(3) = 4e-061
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = -2 / -1
Query: 680 IARIDLIDVKYLI*TGIK 627
+A+I LI +KYLI*TGIK
Sbjct: 618 LAQIALIYLKYLI*TGIK 565
>gb|AW678009.1|AW678009 WS1_12_F02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 605
Score = 335 bits (725), Expect(3) = e-117
Identities = 133/134 (99%), Positives = 133/134 (99%)
Frame = +2 / +3
Query: 53 TTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYF 232
TTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYF
Sbjct: 3 TTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYF 182
Query: 233 HKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVV 412
HKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVV
Sbjct: 183 HKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVV 362
Query: 413 KAKLISKVAEKKIK 454
KAKLISKVAEKKIK
Sbjct: 363 KAKLISKVAEKKIK 404
Score = 332 bits (719), Expect(2) = 7e-094
Identities = 141/185 (76%), Positives = 145/185 (78%)
Frame = -1 / -2
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 556 TGSSHRFKNYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 377
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQRRSMLTAGQ*NL
Sbjct: 376 MSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NL 197
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFF 67
LRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFF
Sbjct: 196 LRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFF 17
Query: 66 LKRVV 52
LKRVV
Sbjct: 16 LKRVV 2
Score = 138 bits (297), Expect(2) = 3e-058
Identities = 64/94 (68%), Positives = 67/94 (71%)
Frame = -3 / -1
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 344 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 165
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLAD 113
LAEV RMVLVEED TSRVLPVLAD
Sbjct: 164 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLAD 63
Score = 126 bits (270), Expect(3) = 3e-051
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 302 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 481
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PVV K V AC
Sbjct: 482 TSSAFLSQLFVLRRPVVFKSVAAAC 556
Score = 124 bits (266), Expect(2) = 1e-040
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 237 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 85
Score = 107 bits (229), Expect(2) = 3e-058
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / -1
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 560 PNRQQPQI*KLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 411
Score = 101 bits (215), Expect(3) = e-117
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3 / +1
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTCSF ICG CL G +
Sbjct: 430 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCSF*ICGCCLLGQCF 570
Score = 90.0 bits (190), Expect(3) = 3e-051
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 77 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 238
Score = 64.8 bits (135), Expect(2) = 1e-040
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / -3
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 561 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 439
Score = 33.6 bits (67), Expect(2) = 7e-094
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 648 FDMNWHQKPHK 616
FDMNWHQ PHK
Sbjct: 600 FDMNWHQNPHK 568
Score = 25.8 bits (50), Expect(3) = e-117
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 619 MRFLMPVHIKY 651
MR LMPVHIK+
Sbjct: 571 MRILMPVHIKF 603
Score = 25.4 bits (49), Expect(3) = 3e-051
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 618 YAVFDASSYQIF 653
Y FDASSYQIF
Sbjct: 570 YEDFDASSYQIF 605
>gb|CX616334.1|CX616334 GABR1_27_G06.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_27_G06_A002 3', mRNA sequence
Length = 586
Score = 298 bits (646), Expect(3) = e-109
Identities = 118/120 (98%), Positives = 118/120 (98%)
Frame = +2 / +1
Query: 95 SAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNI 274
SAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNI
Sbjct: 1 SAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNI 180
Query: 275 ERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 454
ERLWSMVP DKAAEAGGDKAPQID TQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK
Sbjct: 181 ERLWSMVPADKAAEAGGDKAPQIDATQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 360
Score = 292 bits (631), Expect(2) = 1e-084
Identities = 125/170 (73%), Positives = 129/170 (75%)
Frame = -1 / -3
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 512 TGSSHRFKNYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 333
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCV SICG S GT+DQRRSMLTAGQ*NL
Sbjct: 332 MSLALTTMGLGGSTPFPSTLK*PNCVASICGALSPPASAALSAGTMDQRRSMLTAGQ*NL 153
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPA 97
LRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPA
Sbjct: 152 LRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPA 3
Score = 133 bits (286), Expect(3) = 2e-059
Identities = 62/94 (65%), Positives = 66/94 (70%)
Frame = -3 / -2
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELR +D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 300 RQHPLPEHLEVAELRGIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 121
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLAD 113
LAEV RMVLVE+D TSRVLPVLAD
Sbjct: 120 LAEVTRMVLVEKDAVVVHATGVTATSRVLPVLAD 19
Score = 126 bits (270), Expect(3) = 9e-052
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1 / +3
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 258 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 437
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PVV K V AC
Sbjct: 438 TSSAFLSQLFVLRRPVVFKSVAAAC 512
Score = 123 bits (263), Expect(2) = 3e-040
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = -2 / -1
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCR+G GGGACHRRYRDLP
Sbjct: 193 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRKGCGGGACHRRYRDLP 41
Score = 107 bits (229), Expect(3) = 2e-059
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / -2
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 516 PNRQQPQI*KLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 367
Score = 101 bits (215), Expect(3) = e-109
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3 / +2
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTCSF ICG CL G +
Sbjct: 386 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCSF*ICGCCLLGQCF 526
Score = 88.1 bits (186), Expect(3) = 9e-052
Identities = 37/54 (68%), Positives = 38/54 (70%)
Frame = +1 / +3
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+P RQVPS LLRQG H RGQHRAPLV
Sbjct: 33 EAPGRSR*RRWHAPPPHPFRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 194
Score = 64.8 bits (135), Expect(2) = 3e-040
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / -1
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 517 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 395
Score = 43.2 bits (88), Expect(2) = 1e-084
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = -1 / -1
Query: 672 DRFN*CEIFDMNWHQKPHK 616
D FN EIFDMNWHQ PHK
Sbjct: 580 DSFNISEIFDMNWHQNPHK 524
Score = 36.8 bits (74), Expect(3) = e-109
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +1 / +2
Query: 619 MRFLMPVHIKYFTSIKSILA 678
MR LMPVHIKYF IK+I A
Sbjct: 527 MRILMPVHIKYFRYIKAICA 586
Score = 29.0 bits (57), Expect(3) = 9e-052
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = +3 / +1
Query: 618 YAVFDASSYQIFHIN*IY 671
Y FDASSYQIF I * Y
Sbjct: 526 YEDFDASSYQIFQIY*SY 579
Score = 27.6 bits (54), Expect(3) = 2e-059
Identities = 13/17 (76%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 677 ARIDLIDVKYLI*TGIK 627
A+I LI +KYLI*TGIK
Sbjct: 585 AQIALIYLKYLI*TGIK 535
>gb|AW924657.1|AW924657 WS1_71_H07.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 344 bits (745), Expect(3) = e-108
Identities = 137/140 (97%), Positives = 139/140 (99%)
Frame = +2 / +3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 39 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 218
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP
Sbjct: 219 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 398
Query: 395 PKPIVVKAKLISKVAEKKIK 454
PKPIVVKAKLISKVAEKKIK
Sbjct: 399 PKPIVVKAKLISKVAEKKIK 458
Score = 319 bits (690), Expect(2) = 2e-088
Identities = 134/171 (78%), Positives = 137/171 (80%)
Frame = -1 / -2
Query: 552 RQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLEMSLALTTMGFGGSTPFPS 373
RQEST SSDID K ALIFFSATLEMSLALTTMG GGSTPFPS
Sbjct: 556 RQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLEMSLALTTMGLGGSTPFPS 377
Query: 372 TLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGW 193
TLK*PNCVTSICG S GT+DQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGW
Sbjct: 376 TLK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGW 197
Query: 192 YLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVIAAA 40
YLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFFLKRVVIAAA
Sbjct: 196 YLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFFLKRVVIAAA 44
Score = 146 bits (314), Expect(3) = 1e-054
Identities = 71/119 (59%), Positives = 74/119 (62%)
Frame = -3 / -1
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 398 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 219
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 218 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 42
Score = 124 bits (266), Expect(3) = 1e-035
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 291 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 139
Score = 104 bits (221), Expect(3) = 1e-043
Identities = 48/70 (68%), Positives = 50/70 (71%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 356 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 535
Query: 532 TDSAFLSRQF 561
T SAFLS+ F
Sbjct: 536 TSSAFLSQLF 565
Score = 90.0 bits (190), Expect(3) = 1e-043
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 131 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 292
Score = 78.0 bits (164), Expect(3) = 1e-054
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -3 / -1
Query: 562 QIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
QIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 566 QIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 465
Score = 63.4 bits (132), Expect(3) = e-108
Identities = 26/27 (96%), Positives = 27/27 (100%)
Frame = +3 / +1
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAI 560
PPRFQSLFASWF*+LYLN**CFPVSAI
Sbjct: 484 PPRFQSLFASWF*DLYLN**CFPVSAI 564
Score = 42.3 bits (86), Expect(3) = 1e-035
Identities = 20/24 (83%), Positives = 20/24 (83%)
Frame = -2 / -3
Query: 560 NCRDRKALSVQI*ISKPGGEQGLK 489
N DRKAL VQI*ISKP GEQGLK
Sbjct: 564 NS*DRKALLVQI*ISKPRGEQGLK 493
Score = 28.6 bits (56), Expect(3) = 1e-054
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -1
Query: 44 PPTYLGSTWE 15
PPTYLGS WE
Sbjct: 38 PPTYLGSAWE 9
Score = 28.6 bits (56), Expect(2) = 2e-088
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 46 RRRLTWAAPG 17
RRRLTWAAPG
Sbjct: 40 RRRLTWAAPG 11
Score = 25.4 bits (49), Expect(3) = e-108
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +2
Query: 17 PRCCPGKSAAA 49
PR CPGKSAA+
Sbjct: 11 PRRCPGKSAAS 43
Score = 24.0 bits (46), Expect(3) = 1e-035
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 45 AADLPGQHLG 16
AADLPGQ LG
Sbjct: 39 AADLPGQRLG 10
Score = 22.1 bits (42), Expect(3) = 1e-043
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +1
Query: 16 SQVLPR*VGG 45
SQ LPR*VGG
Sbjct: 10 SQALPR*VGG 39
>gb|BE600562.1|BE600562 PI1_94_F10.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 572
Score = 344 bits (745), Expect(3) = e-107
Identities = 137/140 (97%), Positives = 139/140 (99%)
Frame = +2 / +3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 57 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 236
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP
Sbjct: 237 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 416
Query: 395 PKPIVVKAKLISKVAEKKIK 454
PKPIVVKAKLISKVAEKKIK
Sbjct: 417 PKPIVVKAKLISKVAEKKIK 476
Score = 316 bits (685), Expect(2) = 7e-090
Identities = 133/170 (78%), Positives = 136/170 (80%)
Frame = -1 / -2
Query: 549 QESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLEMSLALTTMGFGGSTPFPST 370
QEST SSDID K ALIFFSATLEMSLALTTMG GGSTPFPST
Sbjct: 571 QESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLEMSLALTTMGLGGSTPFPST 392
Query: 369 LK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWY 190
LK*PNCVTSICG S GT+DQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWY
Sbjct: 391 LK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWY 212
Query: 189 LSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVIAAA 40
LSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFFLKRVVIAAA
Sbjct: 211 LSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFFLKRVVIAAA 62
Score = 146 bits (314), Expect(3) = 5e-053
Identities = 71/119 (59%), Positives = 74/119 (62%)
Frame = -3 / -1
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 416 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 237
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 236 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 60
Score = 124 bits (266), Expect(3) = 2e-035
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 309 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 157
Score = 100 bits (212), Expect(3) = 2e-043
Identities = 46/66 (69%), Positives = 47/66 (71%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 374 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 553
Query: 532 TDSAFL 549
T SAFL
Sbjct: 554 TSSAFL 571
Score = 90.0 bits (190), Expect(3) = 2e-043
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 149 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 310
Score = 69.8 bits (146), Expect(3) = 5e-053
Identities = 28/30 (93%), Positives = 28/30 (93%)
Frame = -3 / -1
Query: 550 TGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
TGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 572 TGKHY*FRYRSQNQEANKD*NLGGEHDGAA 483
Score = 56.1 bits (116), Expect(3) = e-107
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3 / +1
Query: 480 PPRFQSLFASWF*NLYLN**CFP 548
PPRFQSLFASWF*+LYLN**CFP
Sbjct: 502 PPRFQSLFASWF*DLYLN**CFP 570
Score = 39.1 bits (79), Expect(3) = 2e-035
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2 / -3
Query: 548 RKALSVQI*ISKPGGEQGLK 489
RKAL VQI*ISKP GEQGLK
Sbjct: 570 RKALLVQI*ISKPRGEQGLK 511
Score = 35.9 bits (72), Expect(2) = 7e-090
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / -2
Query: 46 RRRLTWAAPGRGE 8
RRRLTWAAPGRGE
Sbjct: 58 RRRLTWAAPGRGE 20
Score = 31.3 bits (62), Expect(3) = 5e-053
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 44 PPTYLGSTWEG 12
PPTYLGS WEG
Sbjct: 56 PPTYLGSAWEG 24
Score = 29.0 bits (57), Expect(3) = e-107
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 2 LPLPPPRCCPGKSAAA 49
L PPR CPGKSAA+
Sbjct: 14 LHFSPPRRCPGKSAAS 61
Score = 26.7 bits (52), Expect(3) = 2e-035
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 45 AADLPGQHLGG 13
AADLPGQ LGG
Sbjct: 57 AADLPGQRLGG 25
Score = 25.4 bits (49), Expect(3) = 2e-043
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 13 PSQVLPR*VGG 45
PSQ LPR*VGG
Sbjct: 25 PSQALPR*VGG 57
>gb|CD232053.1|CD232053 SS1_31_B03.g1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_31_B03_A012 5', mRNA sequence
Length = 582
Score = 338 bits (732), Expect(3) = e-105
Identities = 135/140 (96%), Positives = 137/140 (97%)
Frame = +2 / +3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 69 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 248
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP
Sbjct: 249 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 428
Query: 395 PKPIVVKAKLISKVAEKKIK 454
PKPIVVKAKLISK A KKIK
Sbjct: 429 PKPIVVKAKLISKGAXKKIK 488
Score = 308 bits (667), Expect(2) = 2e-087
Identities = 130/169 (76%), Positives = 133/169 (78%)
Frame = -1 / -3
Query: 546 ESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLEMSLALTTMGFGGSTPFPSTL 367
EST SSDID K ALIF SA LEMSLALTTMG GGSTPFPSTL
Sbjct: 580 ESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFXSAPLEMSLALTTMGLGGSTPFPSTL 401
Query: 366 K*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWYL 187
K*PNCVTSICG S GT+DQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWYL
Sbjct: 400 K*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWYL 221
Query: 186 SKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVIAAA 40
SKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFFLKRVVIAAA
Sbjct: 220 SKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFFLKRVVIAAA 74
Score = 143 bits (306), Expect(3) = 3e-051
Identities = 70/119 (58%), Positives = 73/119 (61%)
Frame = -3 / -2
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 428 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 249
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVEED TSRVL VLAD AR HRRRR
Sbjct: 248 LAEVTRMVLVEEDAVVVHATGVTATSRVLSVLADTAVPGGHVAALLAVLLEARRHRRRR 72
Score = 124 bits (266), Expect(3) = 2e-035
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -1
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 321 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 169
Score = 98.2 bits (208), Expect(3) = 3e-042
Identities = 46/65 (70%), Positives = 47/65 (72%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 386 AVRLLQGAREGGAAAQAHRGQGQAHLQGRRXEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 565
Query: 532 TDSAF 546
T SAF
Sbjct: 566 TSSAF 580
Score = 88.1 bits (186), Expect(3) = 3e-042
Identities = 37/54 (68%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
+APGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 161 KAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 322
Score = 67.5 bits (141), Expect(3) = 3e-051
Identities = 27/29 (93%), Positives = 27/29 (93%)
Frame = -3 / -2
Query: 547 GKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
GKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 581 GKHY*FRYRSQNQEANKD*NLGGEHDGAA 495
Score = 56.1 bits (116), Expect(3) = e-105
Identities = 22/23 (95%), Positives = 23/23 (100%)
Frame = +3 / +1
Query: 480 PPRFQSLFASWF*NLYLN**CFP 548
PPRFQSLFASWF*+LYLN**CFP
Sbjct: 514 PPRFQSLFASWF*DLYLN**CFP 582
Score = 39.1 bits (79), Expect(3) = 2e-035
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -2 / -1
Query: 548 RKALSVQI*ISKPGGEQGLK 489
RKAL VQI*ISKP GEQGLK
Sbjct: 582 RKALLVQI*ISKPRGEQGLK 523
Score = 35.9 bits (72), Expect(2) = 2e-087
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / -3
Query: 46 RRRLTWAAPGRGE 8
RRRLTWAAPGRGE
Sbjct: 70 RRRLTWAAPGRGE 32
Score = 31.3 bits (62), Expect(3) = 3e-051
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 44 PPTYLGSTWEG 12
PPTYLGS WEG
Sbjct: 68 PPTYLGSAWEG 36
Score = 29.0 bits (57), Expect(3) = e-105
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +2
Query: 2 LPLPPPRCCPGKSAAA 49
L PPR CPGKSAA+
Sbjct: 26 LHFSPPRRCPGKSAAS 73
Score = 26.7 bits (52), Expect(3) = 2e-035
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 45 AADLPGQHLGG 13
AADLPGQ LGG
Sbjct: 69 AADLPGQRLGG 37
Score = 25.4 bits (49), Expect(3) = 3e-042
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 13 PSQVLPR*VGG 45
PSQ LPR*VGG
Sbjct: 37 PSQALPR*VGG 69
>gb|AW678984.1|AW678984 WS1_21_E05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 573
Score = 287 bits (622), Expect(3) = e-103
Identities = 114/115 (99%), Positives = 114/115 (99%)
Frame = +2 / +3
Query: 110 RIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNIERLWS 289
RIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNIERLWS
Sbjct: 3 RIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNIERLWS 182
Query: 290 MVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 454
MVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK
Sbjct: 183 MVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 347
Score = 281 bits (609), Expect(2) = 9e-079
Identities = 122/166 (73%), Positives = 126/166 (75%)
Frame = -1 / -3
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 499 TGSSHRFKNYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 320
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQRRSMLTAGQ*NL
Sbjct: 319 MSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NL 140
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMR 109
LRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+R
Sbjct: 139 LRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIR 2
Score = 137 bits (293), Expect(2) = 1e-057
Identities = 63/94 (67%), Positives = 67/94 (71%)
Frame = -3 / -2
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 287 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 108
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLAD 113
LAEV RMVLVE+D TSRVLPVLAD
Sbjct: 107 LAEVTRMVLVEKDAVVVHATGVTATSRVLPVLAD 6
Score = 126 bits (270), Expect(3) = 1e-050
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 245 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 424
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PVV K V AC
Sbjct: 425 TSSAFLSQLFVLRRPVVFKSVAAAC 499
Score = 123 bits (263), Expect(2) = 3e-040
Identities = 45/51 (88%), Positives = 48/51 (94%)
Frame = -2 / -1
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCR+G GGGACHRRYRDLP
Sbjct: 180 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRKGCGGGACHRRYRDLP 28
Score = 107 bits (229), Expect(2) = 1e-057
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / -2
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 503 PNRQQPQI*KLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 354
Score = 101 bits (215), Expect(3) = e-103
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3 / +1
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTCSF ICG CL G +
Sbjct: 373 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCSF*ICGCCLLGQCF 513
Score = 88.1 bits (186), Expect(3) = 1e-050
Identities = 37/54 (68%), Positives = 38/54 (70%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+P RQVPS LLRQG H RGQHRAPLV
Sbjct: 20 EAPGRSR*RRWHAPPPHPFRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 181
Score = 64.8 bits (135), Expect(2) = 3e-040
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / -1
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 504 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 382
Score = 33.6 bits (67), Expect(2) = 9e-079
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 648 FDMNWHQKPHK 616
FDMNWHQ PHK
Sbjct: 543 FDMNWHQNPHK 511
Score = 27.2 bits (53), Expect(3) = e-103
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1 / +1
Query: 619 MRFLMPVHIKYFTSIKSILA 678
MR LMPVHIK+ +K A
Sbjct: 514 MRILMPVHIKFSDILKLFCA 573
Score = 25.4 bits (49), Expect(3) = 1e-050
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 618 YAVFDASSYQIF 653
Y FDASSYQIF
Sbjct: 513 YEDFDASSYQIF 548
>gb|BE363844.1|BE363844 WS1_71_H07.g2_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 500
Score = 344 bits (745), Expect(2) = 5e-095
Identities = 137/140 (97%), Positives = 139/140 (99%)
Frame = +2 / +1
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 37 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 216
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP
Sbjct: 217 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 396
Query: 395 PKPIVVKAKLISKVAEKKIK 454
PKPIVVKAKLISKVAEKKIK
Sbjct: 397 PKPIVVKAKLISKVAEKKIK 456
Score = 301 bits (652), Expect(3) = 7e-086
Identities = 122/138 (88%), Positives = 125/138 (90%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSATLEMSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQRRS
Sbjct: 455 LIFFSATLEMSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRS 276
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPAD
Sbjct: 275 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPAD 96
Query: 93 TWPRFLRFFLKRVVIAAA 40
TWPRFLRFFLKRVVIAAA
Sbjct: 95 TWPRFLRFFLKRVVIAAA 42
Score = 146 bits (314), Expect(2) = 7e-037
Identities = 71/119 (59%), Positives = 74/119 (62%)
Frame = -3 / -3
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 396 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 217
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 216 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 40
Score = 124 bits (266), Expect(2) = 6e-029
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -2
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 289 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 137
Score = 90.0 bits (190), Expect(3) = 3e-030
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +3
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 129 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 290
Score = 58.8 bits (122), Expect(3) = 3e-030
Identities = 28/46 (60%), Positives = 29/46 (63%)
Frame = +1 / +3
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLG 489
AVRLLQGAREGGAAA+AH QGQAHL AHRLG
Sbjct: 354 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLG 491
Score = 28.6 bits (56), Expect(2) = 7e-037
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 44 PPTYLGSTWE 15
PPTYLGS WE
Sbjct: 36 PPTYLGSAWE 7
Score = 28.6 bits (56), Expect(3) = 7e-086
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 46 RRRLTWAAPG 17
RRRLTWAAPG
Sbjct: 38 RRRLTWAAPG 9
Score = 28.1 bits (55), Expect(3) = 7e-086
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 490 NLGGEHDGAA 461
NLGGEHDGAA
Sbjct: 492 NLGGEHDGAA 463
Score = 25.4 bits (49), Expect(2) = 5e-095
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2 / +3
Query: 17 PRCCPGKSAAA 49
PR CPGKSAA+
Sbjct: 9 PRRCPGKSAAS 41
Score = 24.0 bits (46), Expect(2) = 6e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 45 AADLPGQHLG 16
AADLPGQ LG
Sbjct: 37 AADLPGQRLG 8
Score = 22.1 bits (42), Expect(3) = 3e-030
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 16 SQVLPR*VGG 45
SQ LPR*VGG
Sbjct: 8 SQALPR*VGG 37
>gb|BE600297.1|BE600297 PI1_94_F10.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 451
Score = 338 bits (732), Expect = 6e-092
Identities = 135/138 (97%), Positives = 135/138 (97%)
Frame = +2 / +3
Query: 41 AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVG 220
A MTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVG
Sbjct: 3 APPMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVG 182
Query: 221 MRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPK 400
MRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPK
Sbjct: 183 MRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLPPK 362
Query: 401 PIVVKAKLISKVAEKKIK 454
PIVVKAKLISKVAEKKIK
Sbjct: 363 PIVVKAKLISKVAEKKIK 416
Score = 297 bits (644), Expect = 8e-080
Identities = 120/138 (86%), Positives = 123/138 (89%)
Frame = -1 / -1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRS 274
LIFFSATLEMSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQRRS
Sbjct: 415 LIFFSATLEMSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRS 236
Query: 273 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPAD 94
MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPAD
Sbjct: 235 MLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPAD 56
Query: 93 TWPRFLRFFLKRVVIAAA 40
TWPRFLRFFLKRVVI A
Sbjct: 55 TWPRFLRFFLKRVVIGGA 2
Score = 144 bits (309), Expect = 1e-033
Identities = 70/118 (59%), Positives = 73/118 (61%)
Frame = -3 / -3
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 356 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 177
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRR 41
LAEV RMVLVEED TSRVLPVLAD AR HRRR
Sbjct: 176 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRR 3
Score = 124 bits (266), Expect = 1e-027
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -2
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 249 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 97
Score = 90.0 bits (190), Expect(2) = 1e-027
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 89 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 250
Score = 54.2 bits (112), Expect(2) = 1e-027
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHR 483
AVRLLQGAREGGAAA+AH QGQAHL AHR
Sbjct: 314 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHR 445
>gb|CF486980.1|CF486980 POL1_41_B06.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_41_B06_A002 3', mRNA sequence
Length = 601
Score = 237 bits (511), Expect(3) = 1e-087
Identities = 95/96 (98%), Positives = 95/96 (98%)
Frame = +2 / +1
Query: 167 HHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQID 346
HHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQID
Sbjct: 109 HHRILFDKYHPGYFGKVGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQID 288
Query: 347 VTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 454
VTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK
Sbjct: 289 VTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 396
Score = 227 bits (491), Expect(2) = 1e-062
Identities = 104/146 (71%), Positives = 107/146 (73%)
Frame = -1 / -3
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 548 TGSSHRFKNYRSS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 369
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQRRSMLTAGQ*NL
Sbjct: 368 MSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NL 189
Query: 246 LRSLWK*RMPTLPK*PGWYLSKRIRW 169
LRSLWK*RMPTLPK*PGWYLSKR+RW
Sbjct: 188 LRSLWK*RMPTLPK*PGWYLSKRMRW 111
Score = 126 bits (270), Expect(3) = 9e-041
Identities = 58/85 (68%), Positives = 61/85 (71%)
Frame = +1 / +3
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 294 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 473
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR+PVV K V AC
Sbjct: 474 TSSAFLSQLFVLRRPVVFKSVAAAC 548
Score = 122 bits (261), Expect(2) = 3e-053
Identities = 54/73 (73%), Positives = 57/73 (78%)
Frame = -3 / -2
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+
Sbjct: 336 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHAD 157
Query: 214 LAEVARMVLVEED 176
LAEV RMVLVEED
Sbjct: 156 LAEVTRMVLVEED 118
Score = 107 bits (229), Expect(2) = 3e-053
Identities = 45/50 (90%), Positives = 46/50 (92%)
Frame = -3 / -2
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQVFLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 552 PNRQQPQI*KLQVFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 403
Score = 101 bits (215), Expect(3) = 1e-087
Identities = 40/47 (85%), Positives = 42/47 (89%)
Frame = +3 / +2
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKKTCSF ICG CL G +
Sbjct: 422 PPRFQSLFASWF*DLYLN**CFPVSAICVKKTCSF*ICGCCLLGQCF 562
Score = 94.5 bits (200), Expect(2) = 1e-031
Identities = 35/40 (87%), Positives = 37/40 (92%)
Frame = -2 / -1
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGG 168
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GG
Sbjct: 229 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGG 110
Score = 64.8 bits (135), Expect(2) = 1e-031
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / -1
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 553 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 431
Score = 54.7 bits (113), Expect(3) = 9e-041
Identities = 24/40 (60%), Positives = 25/40 (62%)
Frame = +1 / +3
Query: 169 PPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
PP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 111 PPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 230
Score = 33.6 bits (67), Expect(2) = 1e-062
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 648 FDMNWHQKPHK 616
FDMNWHQ PHK
Sbjct: 592 FDMNWHQNPHK 560
Score = 25.8 bits (50), Expect(3) = 1e-087
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 619 MRFLMPVHIKY 651
MR LMPVHIK+
Sbjct: 563 MRILMPVHIKF 595
Score = 25.4 bits (49), Expect(3) = 9e-041
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 618 YAVFDASSYQIF 653
Y FDASSYQIF
Sbjct: 562 YEDFDASSYQIF 597
>gb|CW365606.1|CW365606 fsbb001f038d13k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f038d13, DNA
sequence
Length = 537
Score = 232 bits (502), Expect(2) = 3e-085
Identities = 88/97 (90%), Positives = 91/97 (93%)
Frame = +2 / -2
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
+ AAAMTT KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 494 RRAAAMTTSLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 315
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGG 325
VGMRYFHKLRNKFYCP+VN+ERLWSMVP DK AEA G
Sbjct: 314 VGMRYFHKLRNKFYCPSVNVERLWSMVPADKVAEAAG 204
Score = 193 bits (417), Expect(2) = 2e-066
Identities = 76/86 (88%), Positives = 78/86 (90%)
Frame = -1 / +1
Query: 297 GTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCL 118
GTIDQ RS LT GQ*NLLRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CL
Sbjct: 232 GTIDQSRSTLTEGQ*NLLRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCL 411
Query: 117 PMRPCPADTWPRFLRFFLKRVVIAAA 40
PMRPCPADT PRF RFF + VVIAAA
Sbjct: 412 PMRPCPADT*PRFFRFFFRLVVIAAA 489
Score = 107 bits (229), Expect(2) = 7e-028
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -2 / +2
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDL 138
TR AR *PRGSRTCCGA GS+AC+PCRSSP GTCRRG GGGAC RRYRDL
Sbjct: 242 TRAARR*PRGSRTCCGACGSSACRPCRSSPGGTCRRGCGGGACLRRYRDL 391
Score = 104 bits (221), Expect(2) = 3e-085
Identities = 44/49 (89%), Positives = 46/49 (93%)
Frame = +2 / -2
Query: 308 AAEAGGDKAPQIDVTQFGYFKVLGKGVLPPKPIVVKAKLISKVAEKKIK 454
A AGGDKAP +DVTQFGYFKVLGKG+LPPKPIVVKAKLISKVAEKKIK
Sbjct: 218 AEAAGGDKAPLLDVTQFGYFKVLGKGMLPPKPIVVKAKLISKVAEKKIK 72
Score = 104 bits (221), Expect = 2e-021
Identities = 51/85 (60%), Positives = 54/85 (63%)
Frame = -3 / +3
Query: 295 HHRPEALDVDRGAVELVAELMEVTHANLAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLA 116
HHRPE LDVDRGAVELVAEL+EV HA+LAEVAR+VLVEED TSRVLPVLA
Sbjct: 234 HHRPEPLDVDRGAVELVAELVEVAHADLAEVARVVLVEEDAVVVHASGVTATSRVLPVLA 413
Query: 115 DXXXXXXXXXXXXXXXXXARCHRRR 41
D AR HRRR
Sbjct: 414 DAAVPRRHVTALLPVLLQARRHRRR 488
Score = 80.3 bits (169), Expect(2) = 2e-066
Identities = 35/40 (87%), Positives = 35/40 (87%)
Frame = -1 / +1
Query: 453 LIFFSATLEMSLALTTMGFGGSTPFPSTLK*PNCVTSICG 334
LIFFSATLEMSLALTTMG GGS P PSTLK*PNCVTS G
Sbjct: 73 LIFFSATLEMSLALTTMGLGGSIPLPSTLK*PNCVTSRSG 192
Score = 37.3 bits (75), Expect(2) = 7e-028
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = -3 / +3
Query: 394 RQHPLPEHLEVAELRDV 344
RQHPL EHLEVAELR V
Sbjct: 132 RQHPLAEHLEVAELRHV 182
>gb|CF486277.1|CF486277 POL1_36_G01.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_G01_A002 5', mRNA sequence
Length = 417
Score = 296 bits (640), Expect(2) = 1e-081
Identities = 115/119 (96%), Positives = 117/119 (98%)
Frame = +2 / +1
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 61 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 240
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVL 391
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAE GGDKAPQIDVTQFGYFKVLGKGVL
Sbjct: 241 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEVGGDKAPQIDVTQFGYFKVLGKGVL 417
Score = 257 bits (556), Expect(2) = 3e-072
Identities = 102/117 (87%), Positives = 105/117 (89%)
Frame = -1 / -2
Query: 390 STPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTL 211
STPFPSTLK*PNCVTSICG S GT+DQRRSMLTAGQ*NLLRSLWK*RMPTL
Sbjct: 416 STPFPSTLK*PNCVTSICGALSPPTSAALSAGTMDQRRSMLTAGQ*NLLRSLWK*RMPTL 237
Query: 210 PK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVIAAA 40
PK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFFLKRVVIAAA
Sbjct: 236 PK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFFLKRVVIAAA 66
Score = 144 bits (309), Expect(2) = 5e-037
Identities = 70/118 (59%), Positives = 73/118 (61%)
Frame = -3 / -1
Query: 391 QHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHANL 212
QHPLPEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+L
Sbjct: 417 QHPLPEHLEVAELRDIDLRGLVAADLSRLVGGHHGPEALDVDRGAVELVAELVEVTHADL 238
Query: 211 AEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
AEV RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 237 AEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 64
Score = 124 bits (266), Expect(2) = 9e-030
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -3
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 313 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 161
Score = 90.0 bits (190), Expect(3) = 4e-023
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +3
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 153 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 314
Score = 35.9 bits (72), Expect(2) = 3e-072
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / -2
Query: 46 RRRLTWAAPGRGE 8
RRRLTWAAPGRGE
Sbjct: 62 RRRLTWAAPGRGE 24
Score = 31.3 bits (62), Expect(3) = 4e-023
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / +3
Query: 352 AVRLLQGAREGGA 390
AVRLLQGAREGGA
Sbjct: 378 AVRLLQGAREGGA 416
Score = 31.3 bits (62), Expect(2) = 5e-037
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 44 PPTYLGSTWEG 12
PPTYLGS WEG
Sbjct: 60 PPTYLGSAWEG 28
Score = 29.0 bits (57), Expect(2) = 1e-081
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 2 LPLPPPRCCPGKSAAA 49
L PPR CPGKSAA+
Sbjct: 18 LHFSPPRRCPGKSAAS 65
Score = 26.7 bits (52), Expect(2) = 9e-030
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -1 / -3
Query: 45 AADLPGQHLGG 13
AADLPGQ LGG
Sbjct: 61 AADLPGQRLGG 29
Score = 25.4 bits (49), Expect(3) = 4e-023
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +2
Query: 13 PSQVLPR*VGG 45
PSQ LPR*VGG
Sbjct: 29 PSQALPR*VGG 61
>gb|BG240485.1|BG240485 OV1_30_F04.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 397
Score = 291 bits (630), Expect(2) = 4e-080
Identities = 113/116 (97%), Positives = 115/116 (99%)
Frame = +2 / +3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 48 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 227
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGK 382
VGMRYFHKLRNKFYCPAVNIERLWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGK
Sbjct: 228 VGMRYFHKLRNKFYCPAVNIERLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGK 395
Score = 253 bits (547), Expect(2) = 6e-071
Identities = 100/115 (86%), Positives = 103/115 (89%)
Frame = -1 / -1
Query: 384 PFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK 205
PFPSTLK*PNCVTSICG S GT+DQRRSMLTAGQ*NLLRSLWK*RMPTLPK
Sbjct: 397 PFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRRSMLTAGQ*NLLRSLWK*RMPTLPK 218
Query: 204 *PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVIAAA 40
*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFFLKRVVIAAA
Sbjct: 217 *PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFFLKRVVIAAA 53
Score = 133 bits (285), Expect(2) = 1e-033
Identities = 66/114 (57%), Positives = 69/114 (60%)
Frame = -3 / -3
Query: 379 PEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHANLAEVA 200
PEHLEVAELRD+D GHH PEALDVDRGAVELVAEL+EVTHA+LAEV
Sbjct: 392 PEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEALDVDRGAVELVAELVEVTHADLAEVT 213
Query: 199 RMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 212 RMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 51
Score = 124 bits (266), Expect(2) = 5e-030
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2 / -2
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRTCCGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 300 TRGARC*PRGSRTCCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 148
Score = 90.0 bits (190), Expect(3) = 6e-021
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 140 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQQVLLPRGQHRAPLV 301
Score = 35.9 bits (72), Expect(2) = 6e-071
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / -1
Query: 46 RRRLTWAAPGRGE 8
RRRLTWAAPGRGE
Sbjct: 49 RRRLTWAAPGRGE 11
Score = 31.3 bits (62), Expect(2) = 1e-033
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -3
Query: 44 PPTYLGSTWEG 12
PPTYLGS WEG
Sbjct: 47 PPTYLGSAWEG 15
Score = 28.6 bits (56), Expect(2) = 4e-080
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2 / +2
Query: 14 PPRCCPGKSAAA 49
PPR CPGKSAA+
Sbjct: 17 PPRRCPGKSAAS 52
Score = 27.6 bits (54), Expect(2) = 5e-030
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -1 / -2
Query: 45 AADLPGQHLGGGSGS 1
AADLPGQ LGG S
Sbjct: 48 AADLPGQRLGGEKSS 4
Score = 25.4 bits (49), Expect(3) = 6e-021
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +1 / +1
Query: 13 PSQVLPR*VGG 45
PSQ LPR*VGG
Sbjct: 16 PSQALPR*VGG 48
Score = 24.0 bits (46), Expect(3) = 6e-021
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 352 AVRLLQGARE 381
AVRLLQGARE
Sbjct: 365 AVRLLQGARE 394
>gb|CN146627.1|CN146627 WOUND1_42_C10.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_42_C10_A002 5', mRNA sequence
Length = 379
Score = 296 bits (640), Expect = 3e-079
Identities = 115/120 (95%), Positives = 118/120 (98%)
Frame = +2 / +3
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 18 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 197
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 394
VGMRYFHKLRN+FYCPAVNIER WSMVP DKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP
Sbjct: 198 VGMRYFHKLRNEFYCPAVNIERPWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLGKGVLP 377
Score = 257 bits (555), Expect = 2e-067
Identities = 102/119 (85%), Positives = 105/119 (88%)
Frame = -1 / -1
Query: 396 GGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NLLRSLWK*RMP 217
GGSTPFPSTLK*PNCVTSICG S GT+DQ RSMLTAGQ*N LRSLWK*RMP
Sbjct: 379 GGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQGRSMLTAGQ*NSLRSLWK*RMP 200
Query: 216 TLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVIAAA 40
TLPK*PGWYLSKR+RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFFLKRVVIAAA
Sbjct: 199 TLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFFLKRVVIAAA 23
Score = 143 bits (307), Expect = 3e-033
Identities = 70/119 (58%), Positives = 73/119 (61%)
Frame = -3 / -3
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH P ALDVDRGAVELVAEL+EVTHA+
Sbjct: 377 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPGALDVDRGAVELVAELVEVTHAD 198
Query: 214 LAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLADXXXXXXXXXXXXXXXXXARCHRRRR 38
LAEV RMVLVEED TSRVLPVLAD AR HRRRR
Sbjct: 197 LAEVTRMVLVEEDAVVVHATGVTATSRVLPVLADTAVPGGHVAALLAVLLEARRHRRRR 21
Score = 119 bits (254), Expect = 5e-026
Identities = 45/51 (88%), Positives = 47/51 (92%)
Frame = -2 / -2
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDLP 135
TRGARC*PRGSRT CGA GSNAC+PCRS+ DGTCRRG GGGACHRRYRDLP
Sbjct: 270 TRGARC*PRGSRTRCGACGSNACRPCRSNQDGTCRRGCGGGACHRRYRDLP 118
Score = 90.0 bits (190), Expect(2) = 7e-022
Identities = 38/54 (70%), Positives = 39/54 (72%)
Frame = +1 / +2
Query: 127 EAPGRSR*RRWHAPPPYPLRQVPSGLLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
EAPGRSR*RRWHAPPP+PLRQVPS LLRQG H RGQHRAPLV
Sbjct: 110 EAPGRSR*RRWHAPPPHPLRQVPSWLLRQGRHALLPQAPQRVLLPRGQHRAPLV 271
Score = 35.0 bits (70), Expect(2) = 7e-022
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / +2
Query: 352 AVRLLQGAREGGAAA 396
AVRLLQGAREGGAAA
Sbjct: 335 AVRLLQGAREGGAAA 379
>gb|CF486193.1|CF486193 POL1_36_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_G01_A002 3', mRNA sequence
Length = 472
Score = 202 bits (436), Expect(3) = 7e-079
Identities = 83/85 (97%), Positives = 83/85 (97%)
Frame = +2 / +1
Query: 200 GYFGKVGMRYFHKLRNKFYCPAVNIERLWSMVPTDKAAEAGGDKAPQIDVTQFGYFKVLG 379
GYFGKVGMRYFHKLRNKFYCPAVNIE LWSMVP DKAAEAGGDKAPQIDVTQFGYFKVLG
Sbjct: 1 GYFGKVGMRYFHKLRNKFYCPAVNIEPLWSMVPADKAAEAGGDKAPQIDVTQFGYFKVLG 180
Query: 380 KGVLPPKPIVVKAKLISKVAEKKIK 454
KGVLPPKPIVVKAKLISKVAEKKIK
Sbjct: 181 KGVLPPKPIVVKAKLISKVAEKKIK 255
Score = 194 bits (418), Expect(2) = 9e-055
Identities = 93/135 (68%), Positives = 95/135 (70%)
Frame = -1 / -3
Query: 606 TGRNHIF*NYRFS*HKLPRQESTISSDIDFKXXXXXXXXXXXXXXXXXXXALIFFSATLE 427
TG +H F NYR S*HK RQEST SSDID K ALIFFSATLE
Sbjct: 407 TGSSHRFKNYRAS*HK*LRQESTTSSDIDLKTKRRTRTET*AVSTTAPPAALIFFSATLE 228
Query: 426 MSLALTTMGFGGSTPFPSTLK*PNCVTSICGXXXXXXXXXXSVGTIDQRRSMLTAGQ*NL 247
MSLALTTMG GGSTPFPSTLK*PNCVTSICG S GT+DQR SMLTAGQ*NL
Sbjct: 227 MSLALTTMGLGGSTPFPSTLK*PNCVTSICGALSPPASAALSAGTMDQRGSMLTAGQ*NL 48
Query: 246 LRSLWK*RMPTLPK* 202
LRSLWK*RMPTLPK*
Sbjct: 47 LRSLWK*RMPTLPK* 3
Score = 125 bits (268), Expect(3) = 1e-034
Identities = 58/85 (68%), Positives = 60/85 (70%)
Frame = +1 / +3
Query: 352 AVRLLQGAREGGAAAKAHCRQGQAHLXXXXXXXXXXXXXXXAHRLGFSPCSPPGFEIYI* 531
AVRLLQGAREGGAAA+AH QGQAHL AHRLGFSPCSP GFEIYI*
Sbjct: 153 AVRLLQGAREGGAAAQAHRGQGQAHLQGRREEDQGRRRRRRAHRLGFSPCSPLGFEIYI* 332
Query: 532 TDSAFLSRQFVLRKPVVLKYVVPAC 606
T SAFLS+ FVLR PVV K V AC
Sbjct: 333 TSSAFLSQLFVLRSPVVFKSVAAAC 407
Score = 104 bits (222), Expect(3) = 2e-048
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = -3 / -2
Query: 610 PNRQEPHILKLQVFLTQIAETGKHYQFRYRFQNQEANKD*NLGGEHDGAA 461
PNRQ+P I KLQ FLTQIAETGKHY FRYR QNQEANKD*NLGGEHDGAA
Sbjct: 411 PNRQQPQI*KLQGFLTQIAETGKHY*FRYRSQNQEANKD*NLGGEHDGAA 262
Score = 103 bits (219), Expect(3) = 2e-048
Identities = 45/64 (70%), Positives = 48/64 (75%)
Frame = -3 / -2
Query: 394 RQHPLPEHLEVAELRDVDXXXXXXXXXXXXXXGHHRPEALDVDRGAVELVAELMEVTHAN 215
RQHPLPEHLEVAELRD+D GHH PE LDVDRGAVELVAEL+EVTHA+
Sbjct: 195 RQHPLPEHLEVAELRDIDLRGLVAAGLSRLVGGHHGPEGLDVDRGAVELVAELVEVTHAD 16
Query: 214 LAEV 203
LAEV
Sbjct: 15 LAEV 4
Score = 98.7 bits (209), Expect(3) = 7e-079
Identities = 39/47 (82%), Positives = 41/47 (87%)
Frame = +3 / +2
Query: 480 PPRFQSLFASWF*NLYLN**CFPVSAICVKKTCSFKICGSCLFGSAY 620
PPRFQSLFASWF*+LYLN**CFPVSAICVKK CSF ICG CL G +
Sbjct: 281 PPRFQSLFASWF*DLYLN**CFPVSAICVKKPCSF*ICGCCLLGQCF 421
Score = 71.2 bits (149), Expect(2) = 9e-025
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = -2 / -1
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSS 201
TRGARC*PRGSRTCCGA GSNAC+PCRS+
Sbjct: 88 TRGARC*PRGSRTCCGACGSNACRPCRSN 2
Score = 64.8 bits (135), Expect(2) = 9e-025
Identities = 30/41 (73%), Positives = 32/41 (78%)
Frame = -2 / -1
Query: 611 AKQAGTTYFKTTGFLNTNCRDRKALSVQI*ISKPGGEQGLK 489
++QA T KTTG LNTN DRKAL VQI*ISKP GEQGLK
Sbjct: 412 SQQAAATDLKTTGLLNTNS*DRKALLVQI*ISKPRGEQGLK 290
Score = 40.9 bits (83), Expect(2) = 9e-055
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -1 / -1
Query: 666 FN*CEIFDMNWHQKPHK 616
FN EIFDMNWHQ PHK
Sbjct: 469 FNISEIFDMNWHQNPHK 419
Score = 33.6 bits (67), Expect(3) = 7e-079
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +1 / +2
Query: 619 MRFLMPVHIKYFTSIKS 669
MR LMPVHIKYF IK+
Sbjct: 422 MRILMPVHIKYFRYIKA 472
Score = 31.8 bits (63), Expect(3) = 1e-034
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +1 / +3
Query: 202 LLRQGWHXXXXXXXXXXXXXRGQHRAPLV 288
LLRQG H RGQHRAPLV
Sbjct: 3 LLRQGRHALLPQAPQQVLLPRGQHRAPLV 89
Score = 28.1 bits (55), Expect(3) = 1e-034
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +2 / +3
Query: 623 GF*CQFISNIS 655
GF*CQFISNIS
Sbjct: 426 GF*CQFISNIS 458
Score = 24.4 bits (47), Expect(3) = 2e-048
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 665 LIDVKYLI*TGIK 627
LI +KYLI*TGIK
Sbjct: 468 LIYLKYLI*TGIK 430
>gb|CW275294.1|CW275294 104_748_11404885_116_35380_055 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11404885, DNA
sequence
Length = 668
Score = 215 bits (465), Expect = 4e-055
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = +2 / +1
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 214
+ AAAMTT KKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK
Sbjct: 406 RRAAAMTTSLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGK 585
Query: 215 VGMRYFHKLRNKFYCPAVNIERLWSMV 295
VGMRYFHKLRNKFYCP+VN+ERLWSMV
Sbjct: 586 VGMRYFHKLRNKFYCPSVNVERLWSMV 666
Score = 193 bits (417), Expect = 2e-048
Identities = 76/86 (88%), Positives = 78/86 (90%)
Frame = -1 / -1
Query: 297 GTIDQRRSMLTAGQ*NLLRSLWK*RMPTLPK*PGWYLSKRIRWWCMPPALPRPPGCFLCL 118
GTIDQ RS LT GQ*NLLRSLWK*RMPTLPK*PGWYLSKR+RWWCMPPALPRPPGCF CL
Sbjct: 668 GTIDQSRSTLTEGQ*NLLRSLWK*RMPTLPK*PGWYLSKRMRWWCMPPALPRPPGCFRCL 489
Query: 117 PMRPCPADTWPRFLRFFLKRVVIAAA 40
PMRPCPADT PRF RFF + VVIAAA
Sbjct: 488 PMRPCPADT*PRFFRFFFRLVVIAAA 411
Score = 107 bits (229), Expect = 1e-022
Identities = 42/50 (84%), Positives = 44/50 (88%)
Frame = -2 / -2
Query: 287 TRGARC*PRGSRTCCGAYGSNACQPCRSSPDGTCRRGYGGGACHRRYRDL 138
TR AR *PRGSRTCCGA GS+AC+PCRSSP GTCRRG GGGAC RRYRDL
Sbjct: 658 TRAARR*PRGSRTCCGACGSSACRPCRSSPGGTCRRGCGGGACLRRYRDL 509
Score = 104 bits (221), Expect = 2e-021
Identities = 51/85 (60%), Positives = 54/85 (63%)
Frame = -3 / -3
Query: 295 HHRPEALDVDRGAVELVAELMEVTHANLAEVARMVLVEEDXXXXXXXXXXXTSRVLPVLA 116
HHRPE LDVDRGAVELVAEL+EV HA+LAEVAR+VLVEED TSRVLPVLA
Sbjct: 666 HHRPEPLDVDRGAVELVAELVEVAHADLAEVARVVLVEEDAVVVHASGVTATSRVLPVLA 487
Query: 115 DXXXXXXXXXXXXXXXXXARCHRRR 41
D AR HRRR
Sbjct: 486 DAAVPRRHVTALLPVLLQARRHRRR 412
>gb|CL173358.1|CL173358 104_376_10890821_148_31794_341 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10890821, DNA
sequence
Length = 549
Score = 122 bits (260), Expect(2) = 1e-031
Identities = 43/45 (95%), Positives = 44/45 (97%)
Frame = -1 / -1
Query: 174 RWWCMPPALPRPPGCFLCLPMRPCPADTWPRFLRFFLKRVVIAAA 40
RWWCMPPALPRPPGCF CLP+RPCPADTWPRFLRFFLKRVVIAAA
Sbjct: 549 RWWCMPPALPRPPGCFRCLPIRPCPADTWPRFLRFFLKRVVIAAA 415
Score = 117 bits (250), Expect(2) = 3e-028
Identities = 44/46 (95%), Positives = 46/46 (100%)
Frame = +2 / +2
Query: 35 KSAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHH 172
++AAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHH
Sbjct: 410 RAAAAMTTRFKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHH 547
Score = 35.9 bits (72), Expect(2) = 1e-031
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = -3 / -1
Query: 46 RRRLTWAAPGRGE 8
RRRLTWAAPGRGE
Sbjct: 411 RRRLTWAAPGRGE 373
Score = 29.0 bits (57), Expect(2) = 3e-028
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +1
Query: 2 LPLPPPRCCPGKSAAA 49
L PPR CPGKSAA+
Sbjct: 367 LHFSPPRRCPGKSAAS 414
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 748,623,850
Number of Sequences: 832831
Number of extensions: 10888838
Number of successful extensions: 157331
Number of sequences better than 1.0e-020: 22
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21148835396
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)