TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2455862.2.1
(712 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1... 151 2e-070
gb|AW286181.1|AW286181 LG1_328_E01.g1_A002 Light Grown 1 (L... 151 2e-070
gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2... 150 4e-070
gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2... 150 4e-070
gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stresse... 151 2e-068
gb|AW924499.1|AW924499 WS1_70_C10.b1_A002 Water-stressed 1 ... 151 5e-066
gb|AW924610.1|AW924610 WS1_70_C10.g1_A002 Water-stressed 1 ... 149 9e-055
gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots ... 120 2e-054
gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots ... 120 2e-054
gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorgh... 120 2e-054
gb|BE355210.1|BE355210 DG1_10_F11.g1_A002 Dark Grown 1 (DG1... 120 2e-054
gb|CF427951.1|CF427951 PH1_11_F08.g1_A002 Phosphorous-defic... 120 2e-054
gb|CF429943.1|CF429943 PH1_25_F09.b1_A002 Phosphorous-defic... 120 2e-054
gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves... 120 2e-054
gb|BE359944.1|BE359944 DG1_58_G02.g2_A002 Dark Grown 1 (DG1... 120 2e-054
gb|CD428029.1|CD428029 ETH1_32_H05.b1_A002 Ethylene-treated... 120 8e-054
gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves... 120 2e-053
gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkal... 116 2e-053
gb|CW289115.1|CW289115 104_767_11412305_148_35537_065 Sorgh... 115 7e-053
gb|BG102496.1|BG102496 RHIZ2_33_G06.g1_A003 Rhizome2 (RHIZ2... 115 3e-052
gb|CW466352.1|CW466352 fsbb001f217i24f0 Sorghum methylation... 120 5e-052
gb|CD236019.1|CD236019 SS1_25_C10.b1_A012 Salt-stressed see... 115 7e-052
gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methy... 113 6e-051
gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum m... 113 6e-051
gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorgh... 113 6e-051
gb|CN139961.1|CN139961 OX1_33_E06.b1_A002 Oxidatively-stres... 113 6e-051
gb|AW922831.1|AW922831 DG1_46_D12.g1_A002 Dark Grown 1 (DG1... 113 6e-051
gb|CX616461.1|CX616461 GABR1_28_C04.b1_A002 GA- or brassino... 113 5e-049
gb|BG557261.1|BG557261 EM1_44_F08.g1_A002 Embryo 1 (EM1) So... 108 1e-048
gb|CF760782.1|CF760782 DSAF1_66_E10.b1_A011 Drought-stresse... 151 2e-048
gb|CF428894.1|CF428894 PH1_18_D09.b1_A002 Phosphorous-defic... 108 1e-045
gb|BZ779778.1|BZ779778 ii34e07.b1 WGS-SbicolorF (DH5a methy... 108 2e-045
gb|BF422202.1|BF422202 FM1_13_B11.g1_A003 Floral-Induced Me... 183 2e-045
gb|CW120757.1|CW120757 104_498_11109515_148_34653_042 Sorgh... 113 3e-045
gb|BG356869.1|BG356869 OV2_11_A05.g1_A002 Ovary 2 (OV2) Sor... 135 1e-043
gb|AW282744.1|AW282744 LG1_292_B12.g1_A002 Light Grown 1 (L... 151 3e-042
gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation... 113 1e-041
gb|CD226629.1|CD226629 CCC1_47_H10.b1_A007 Callus culture/c... 98 1e-040
gb|CW257134.1|CW257134 104_722_11227174_116_35151_087 Sorgh... 144 1e-038
gb|AI724073.1|AI724073 RHIZ1_26_F10.y1_A001 Rhizome1 (RHIZ1... 152 6e-037
gb|CF429486.1|CF429486 PH1_22_C12.b1_A002 Phosphorous-defic... 113 5e-036
gb|BE917851.1|BE917851 OV1_7_H07.g1_A002 Ovary 1 (OV1) Sorg... 151 9e-036
gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (L... 135 2e-034
gb|BM317458.1|BM317458 LG1_261_B10.g9_A002 Light Grown 1 (L... 138 1e-031
gb|CF432176.1|CF432176 NIT1_14_A05.g1_A002 Nitrogen-deficie... 113 4e-031
gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stres... 112 4e-030
gb|BE352864.1|BE352864 LG1_267_G10.g1_A002 Light Grown 1 (L... 78 7e-028
gb|CW218469.1|CW218469 104_652_11196207_116_37528_062 Sorgh... 77 2e-027
gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves... 77 2e-027
gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2... 77 2e-027
gb|CX618502.1|CX618502 GABR1_40_B04.b1_A002 GA- or brassino... 77 2e-027
gb|CW111253.1|CW111253 104_484_11104205_148_34527_023 Sorgh... 77 2e-027
gb|BE356755.1|BE356755 DG1_12_C08.g1_A002 Dark Grown 1 (DG1... 77 2e-027
gb|CW368566.1|CW368566 fsbb001f042j11k0 Sorghum methylation... 77 2e-027
gb|AW285132.1|AW285132 LG1_206_E11.g1_A002 Light Grown 1 (L... 77 2e-027
gb|CD235852.1|CD235852 SS1_24_D08.b1_A012 Salt-stressed see... 77 2e-027
gb|AW282975.1|AW282975 LG1_206_D03.g1_A002 Light Grown 1 (L... 77 2e-027
gb|CD236573.1|CD236573 SS1_35_F07.b1_A012 Salt-stressed see... 77 2e-027
gb|BE352863.1|BE352863 LG1_267_G09.g1_A002 Light Grown 1 (L... 77 2e-027
gb|CL148238.1|CL148238 104_328_10592951_116_31783_075 Sorgh... 123 2e-027
gb|CF428603.1|CF428603 PH1_9_D02.b1_A002 Phosphorous-defici... 113 4e-027
gb|CL157536.1|CL157536 104_345_10783651_114_31477_211 Sorgh... 83 1e-026
gb|CN139453.1|CN139453 OX1_22_E01.b1_A002 Oxidatively-stres... 83 1e-026
gb|AW672235.1|AW672235 LG1_358_E01.b1_A002 Light Grown 1 (L... 83 1e-026
gb|CX621250.1|CX621250 GABR1_57_A12.b1_A002 GA- or brassino... 75 1e-026
gb|AW676674.1|AW676674 DG1_13_H08.g1_A002 Dark Grown 1 (DG1... 73 2e-026
gb|CN144004.1|CN144004 WOUND1_19_D07.g1_A002 Wounded leaves... 120 3e-026
gb|CX609287.1|CX609287 ANR1_11_F09.g1_A002 Anaerobic roots ... 120 3e-026
gb|CX609406.1|CX609406 ANR1_12_B05.g1_A002 Anaerobic roots ... 120 3e-026
gb|CN131344.1|CN131344 RHOH1_47_H10.b1_A002 Acid- and alkal... 79 1e-025
gb|CD224909.1|CD224909 CCC1_37_A05.b1_A007 Callus culture/c... 79 1e-025
gb|BE355488.1|BE355488 DG1_114_G02.g1_A002 Dark Grown 1 (DG... 79 1e-025
gb|BG605888.1|BG605888 RHIZ2_82_G10.g1_A003 Rhizome2 (RHIZ2... 79 1e-025
gb|BE361712.1|BE361712 DG1_81_C11.g1_A002 Dark Grown 1 (DG1... 79 1e-025
gb|BE356504.1|BE356504 DG1_125_G03.g1_A002 Dark Grown 1 (DG... 79 1e-025
gb|BE356481.1|BE356481 DG1_125_C07.g1_A002 Dark Grown 1 (DG... 79 1e-025
gb|AW678398.1|AW678398 WS1_15_E05.g1_A002 Water-stressed 1 ... 79 1e-025
gb|BE363177.1|BE363177 DG1_9_H02.g1_A002 Dark Grown 1 (DG1)... 79 1e-025
gb|CN131212.1|CN131212 RHOH1_46_C04.g1_A002 Acid- and alkal... 116 3e-025
gb|CL181053.1|CL181053 104_391_10896478_148_31927_238 Sorgh... 77 4e-025
gb|BE918392.1|BE918392 OV1_3_A07.g1_A002 Ovary 1 (OV1) Sorg... 79 5e-025
gb|AI723941.1|AI723941 RHIZ1_36_A09.y1_A001 Rhizome1 (RHIZ1... 113 4e-024
gb|AI724105.1|AI724105 RHIZ1_6_A09.y2_A001 Rhizome1 (RHIZ1)... 113 4e-024
gb|AI724391.1|AI724391 RHIZ1_36_A09.y2_A001 Rhizome1 (RHIZ1... 113 4e-024
gb|CL177480.1|CL177480 104_384_10893857_148_31915_305 Sorgh... 68 7e-024
gb|CW306937.1|CW306937 104_792_11467109_116_35709_017 Sorgh... 111 9e-024
gb|BG558625.1|BG558625 RHIZ2_58_C08.g1_A003 Rhizome2 (RHIZ2... 111 9e-024
gb|DN552493.1|DN552493 pSHR-RT-A-H1_C07_C085 pSHR Sorghum h... 72 1e-023
gb|CX616545.1|CX616545 GABR1_28_C04.g1_A002 GA- or brassino... 110 3e-023
gb|AW680192.1|AW680192 WS1_4_C09.g1_A002 Water-stressed 1 (... 70 4e-023
gb|CW301138.1|CW301138 104_784_11464043_148_36254_034 Sorgh... 108 8e-023
gb|CW451376.1|CW451376 fsbb001f191g19k0 Sorghum methylation... 108 8e-023
gb|BG355958.2|BG355958 EM1_18_F11.g1_A002 Embryo 1 (EM1) So... 64 3e-022
gb|BG462993.1|BG462993 EM1_46_C02.g1_A002 Embryo 1 (EM1) So... 64 7e-022
gb|CF431009.1|CF431009 NIT1_4_H09.b1_A002 Nitrogen-deficien... 105 1e-021
gb|CW299072.1|CW299072 104_781_11462920_116_35661_050 Sorgh... 98 2e-021
gb|CW323273.1|CW323273 104_817_11476543_148_35960_026 Sorgh... 86 5e-021
gb|CW275098.1|CW275098 104_748_11404780_148_35385_012 Sorgh... 86 5e-021
gb|CW118138.1|CW118138 104_494_11108040_148_34621_088 Sorgh... 63 9e-021
>gb|BE361720.1|BE361720 DG1_81_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 610
Score = 151 bits (325), Expect(2) = 2e-070
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +2
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 191 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 370
Query: 355 LLV 363
++V
Sbjct: 371 IIV 379
Score = 135 bits (290), Expect(2) = 2e-070
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
RY DL YPGGKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 8 RYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 184
Score = 114 bits (244), Expect(3) = 2e-053
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = -3 / -2
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
P P GTQASA *PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY RS
Sbjct: 183 PPPVGTQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRS 16
Score = 108 bits (230), Expect(3) = 2e-053
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -2
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG +SG P+
Sbjct: 363 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHDSGAPT 187
Score = 29.0 bits (57), Expect(3) = 2e-053
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = -1 / -1
Query: 628 QTVKKKQRERRKHSRALVVY 569
Q KKK RER K SR LVV+
Sbjct: 547 QEKKKKTRERTKDSRTLVVW 488
>gb|AW286181.1|AW286181 LG1_328_E01.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 513
Score = 151 bits (325), Expect(2) = 2e-070
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +2
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 227 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 406
Query: 355 LLV 363
++V
Sbjct: 407 IIV 415
Score = 135 bits (290), Expect(2) = 2e-070
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
RY DL YPGGKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 44 RYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 220
Score = 114 bits (244), Expect(2) = 4e-051
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = -3 / -1
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
P P GTQASA *PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY RS
Sbjct: 219 PPPVGTQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRS 52
Score = 108 bits (230), Expect(2) = 4e-051
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG +SG P+
Sbjct: 399 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHDSGAPT 223
>gb|BG465900.1|BG465900 RHIZ2_46_A05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 549
Score = 150 bits (323), Expect(2) = 4e-070
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +2
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 224 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAT 403
Query: 355 LLV 363
++V
Sbjct: 404 IIV 412
Score = 135 bits (290), Expect(2) = 4e-070
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
RY DL YPGGKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 41 RYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 217
Score = 114 bits (243), Expect(2) = 4e-052
Identities = 50/71 (70%), Positives = 53/71 (74%)
Frame = -3 / -1
Query: 383 PRERIGDTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRS 204
PR R T +Q REHSAG PCGN PSSQ*L*CM*F LA ATVPHSAASSWR I RS
Sbjct: 432 PRNRKARTIIVADQFREHSAGNPCGNLHPSSQ*L*CM*FFLAHATVPHSAASSWRFIHRS 253
Query: 203 VPAGQESGRPS 171
VPAG +SG P+
Sbjct: 252 VPAGHDSGAPT 220
Score = 112 bits (239), Expect(2) = 4e-052
Identities = 46/56 (82%), Positives = 46/56 (82%)
Frame = -3 / -1
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
P P GTQASA PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY RS
Sbjct: 216 PPPVGTQASAVYPRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRS 49
>gb|BG559972.1|BG559972 RHIZ2_75_H09.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 538
Score = 150 bits (323), Expect(2) = 4e-070
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +3
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 213 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAT 392
Query: 355 LLV 363
++V
Sbjct: 393 IIV 401
Score = 135 bits (290), Expect(2) = 4e-070
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
RY DL YPGGKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 30 RYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 206
Score = 114 bits (243), Expect(2) = 4e-052
Identities = 50/71 (70%), Positives = 53/71 (74%)
Frame = -3 / -1
Query: 383 PRERIGDTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRS 204
PR R T +Q REHSAG PCGN PSSQ*L*CM*F LA ATVPHSAASSWR I RS
Sbjct: 421 PRNRKARTIIVADQFREHSAGNPCGNLHPSSQ*L*CM*FFLAHATVPHSAASSWRFIHRS 242
Query: 203 VPAGQESGRPS 171
VPAG +SG P+
Sbjct: 241 VPAGHDSGAPT 209
Score = 112 bits (239), Expect(2) = 4e-052
Identities = 46/56 (82%), Positives = 46/56 (82%)
Frame = -3 / -1
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
P P GTQASA PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY RS
Sbjct: 205 PPPVGTQASAVYPRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRS 38
>gb|CF771208.1|CF771208 DSBF1_15_F05.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_15_F05_A010 3', mRNA sequence
Length = 500
Score = 151 bits (325), Expect(2) = 2e-068
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +1
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 169 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 348
Query: 355 LLV 363
++V
Sbjct: 349 IIV 357
Score = 129 bits (276), Expect(2) = 2e-068
Identities = 48/54 (88%), Positives = 50/54 (92%)
Frame = +1 / +3
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDGR 180
YPGGKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G GR
Sbjct: 3 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGGR 164
Score = 110 bits (235), Expect(3) = 7e-051
Identities = 45/53 (84%), Positives = 45/53 (84%)
Frame = -3 / -2
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY 18
P P GTQASA *PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY
Sbjct: 160 PPPVGTQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY 2
Score = 108 bits (230), Expect(3) = 7e-051
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG +SG P+
Sbjct: 341 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHDSGAPT 165
Score = 23.5 bits (45), Expect(3) = 7e-051
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = -1 / -2
Query: 556 KCTWNGRQQHLSCCPV 509
KCTW + LSC +
Sbjct: 460 KCTWGRQHVELSCSSI 413
>gb|AW924499.1|AW924499 WS1_70_C10.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 528
Score = 151 bits (325), Expect(2) = 5e-066
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +2
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 188 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 367
Query: 355 LLV 363
++V
Sbjct: 368 IIV 376
Score = 121 bits (258), Expect(2) = 5e-066
Identities = 45/52 (86%), Positives = 47/52 (90%)
Frame = +1 / +2
Query: 22 PGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
P GKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 26 PAGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 181
Score = 108 bits (230), Expect(2) = 8e-047
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG +SG P+
Sbjct: 360 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHDSGAPT 184
Score = 100 bits (213), Expect(2) = 8e-047
Identities = 42/52 (80%), Positives = 42/52 (80%)
Frame = -3 / -1
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPG 21
P P GTQASA *PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMG P G
Sbjct: 180 PPPVGTQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGXPAG 25
>gb|AW924610.1|AW924610 WS1_70_C10.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 436
Score = 149 bits (319), Expect(2) = 9e-055
Identities = 53/63 (84%), Positives = 58/63 (92%)
Frame = +1 / +1
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PL CPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 121 GAPLLCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 300
Query: 355 LLV 363
++V
Sbjct: 301 IIV 309
Score = 107 bits (228), Expect(2) = 1e-036
Identities = 45/59 (76%), Positives = 47/59 (79%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG SG P+
Sbjct: 293 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHNSGAPT 117
Score = 86.3 bits (182), Expect(2) = 9e-055
Identities = 32/38 (84%), Positives = 34/38 (89%)
Frame = +1 / +1
Query: 64 GSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
GSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 1 GSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 114
Score = 67.0 bits (140), Expect(2) = 1e-036
Identities = 29/37 (78%), Positives = 29/37 (78%)
Frame = -3 / -3
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*L 66
P P GTQASA *PR ET G DQSTFTFPCCVAQ*L
Sbjct: 113 PPPVGTQASAV*PRYETTNGELDQSTFTFPCCVAQ*L 3
>gb|CX609326.1|CX609326 ANR1_12_B05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_12_B05_A002 3', mRNA sequence
Length = 684
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 93 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 263
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 264 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 425
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -3
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 265 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 101
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -3
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 427 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 266
>gb|CX609201.1|CX609201 ANR1_11_F09.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_11_F09_A002 3', mRNA sequence
Length = 665
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 78 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 248
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 249 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 410
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -2
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 250 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 86
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -2
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 412 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 251
>gb|CW299073.1|CW299073 104_781_11462920_148_35657_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11462920, DNA
sequence
Length = 623
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / -1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 404 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 234
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / -1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 233 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 72
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / +1
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 232 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 396
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / +1
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 70 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 231
>gb|BE355210.1|BE355210 DG1_10_F11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 622
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 45 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 215
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 216 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 377
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -1
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 217 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 53
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -1
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 379 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 218
>gb|CF427951.1|CF427951 PH1_11_F08.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_11_F08_A002 5', mRNA sequence
Length = 623
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / -3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 570 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 400
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / -3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 399 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 238
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / +2
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 398 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 562
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / +2
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 236 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 397
>gb|CF429943.1|CF429943 PH1_25_F09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_F09_A002 3', mRNA sequence
Length = 604
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 36 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 206
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 207 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 368
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -1
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 208 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 44
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -1
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 370 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 209
>gb|CN151725.1|CN151725 WOUND1_77_E10.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_77_E10_A002 3', mRNA sequence
Length = 565
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 58 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 228
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 229 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 390
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -3
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 230 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 66
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -3
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 392 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 231
>gb|BE359944.1|BE359944 DG1_58_G02.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 375
Score = 120 bits (256), Expect(2) = 2e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 18 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 188
Score = 113 bits (242), Expect(2) = 2e-054
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 189 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 350
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -3
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 190 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 26
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -3
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 352 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 191
>gb|CD428029.1|CD428029 ETH1_32_H05.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_32_H05_A002 3', mRNA sequence
Length = 599
Score = 120 bits (256), Expect(2) = 8e-054
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 54 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 224
Score = 111 bits (238), Expect(2) = 8e-054
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGT WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 225 ACAAGSGAWMNKQPDSAEWGTAKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 386
Score = 75.8 bits (159), Expect(2) = 5e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -2
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 226 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 62
Score = 69.8 bits (146), Expect(2) = 5e-028
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = -3 / -2
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A VPHSA S I +PA Q
Sbjct: 388 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLAVPHSALSGCLFIHAPLPAAQ 227
>gb|CN143916.1|CN143916 WOUND1_19_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_19_D07_A002 3', mRNA sequence
Length = 682
Score = 120 bits (256), Expect(2) = 2e-053
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 138 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 308
Score = 110 bits (235), Expect(2) = 2e-053
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q +AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 309 ACAAGSGAWMNKQPGSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 470
Score = 75.8 bits (159), Expect(2) = 5e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -1
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 310 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 146
Score = 69.8 bits (146), Expect(2) = 5e-028
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = -3 / -1
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA I +PA Q
Sbjct: 472 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALPGCLFIHAPLPAAQ 311
>gb|CN131128.1|CN131128 RHOH1_46_C04.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_46_C04_A002 3', mRNA sequence
Length = 600
Score = 116 bits (249), Expect(2) = 2e-053
Identities = 42/57 (73%), Positives = 48/57 (84%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV + WS APF VSY+GYSADACV G
Sbjct: 83 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIGWSGAPFVVSYKGYSADACVSGG 253
Score = 113 bits (242), Expect(2) = 2e-053
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 254 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 415
Score = 73.5 bits (154), Expect(2) = 5e-028
Identities = 37/55 (67%), Positives = 39/55 (70%)
Frame = -3 / -1
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQ T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 255 APPLTQASAE*PL*ETTKGAPDQPMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 91
Score = 72.1 bits (151), Expect(2) = 5e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / -1
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 417 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 256
>gb|CW289115.1|CW289115 104_767_11412305_148_35537_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11412305, DNA
sequence
Length = 426
Score = 115 bits (245), Expect(2) = 7e-053
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +1 / -1
Query: 10 DLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 423 DLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 262
Score = 113 bits (242), Expect(2) = 7e-053
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / -1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 261 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 100
Score = 75.8 bits (159), Expect(2) = 1e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / +2
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 260 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 424
Score = 72.1 bits (151), Expect(2) = 1e-028
Identities = 34/54 (62%), Positives = 36/54 (66%)
Frame = -3 / +2
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR HSAG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 98 LNQLRLHSAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 259
>gb|BG102496.1|BG102496 RHIZ2_33_G06.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 557
Score = 115 bits (245), Expect(2) = 3e-052
Identities = 41/57 (71%), Positives = 48/57 (84%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR YSA+ACV G
Sbjct: 3 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYSANACVSGG 173
Score = 111 bits (238), Expect(2) = 3e-052
Identities = 39/53 (73%), Positives = 44/53 (83%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C AG D WM RQLD+AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 174 ACRAGRDGWMHRQLDSAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 332
Score = 70.3 bits (147), Expect(2) = 7e-024
Identities = 37/57 (64%), Positives = 39/57 (68%)
Frame = -3 / -2
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
R +P TQA AE* R*ET KGA DQS P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 181 RHAPPLTQALAE*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARS 11
Score = 61.6 bits (128), Expect(2) = 7e-024
Identities = 31/51 (60%), Positives = 33/51 (64%)
Frame = -3 / -2
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPA 195
+Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+PA
Sbjct: 334 HQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLPA 182
>gb|CW466352.1|CW466352 fsbb001f217i24f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f217i24, DNA
sequence
Length = 386
Score = 120 bits (256), Expect(2) = 5e-052
Identities = 43/57 (75%), Positives = 49/57 (85%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 10 RYADLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 180
Score = 105 bits (225), Expect(2) = 5e-052
Identities = 37/54 (68%), Positives = 44/54 (81%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM Y+YCDDGWRFPQG PAE SR+*F
Sbjct: 181 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYHYCDDGWRFPQGLPAERSRS*F 342
Score = 75.8 bits (159), Expect(2) = 2e-026
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -1
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 182 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 18
Score = 64.8 bits (135), Expect(2) = 2e-026
Identities = 32/53 (60%), Positives = 33/53 (62%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
NQLR SAG PCGN QPSSQ* * M* A TVPHSA S I +PA Q
Sbjct: 341 NQLRLRSAGSPCGNLQPSSQ*W*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 183
>gb|CD236019.1|CD236019 SS1_25_C10.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_25_C10_A012 3', mRNA sequence
Length = 597
Score = 115 bits (245), Expect(2) = 7e-052
Identities = 41/54 (75%), Positives = 47/54 (87%)
Frame = +1 / +3
Query: 10 DLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
DLAYP KPM++HATLWDGSYWAT++GKV +DWS APF VSY+GYSADACV G
Sbjct: 6 DLAYPSSKPMTLHATLWDGSYWATEKGKVPIDWSGAPFVVSYKGYSADACVSGG 167
Score = 110 bits (235), Expect(2) = 7e-052
Identities = 38/54 (70%), Positives = 44/54 (81%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PA CSR+*F
Sbjct: 168 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAGCSRS*F 329
Score = 75.8 bits (159), Expect(2) = 5e-028
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = -3 / -3
Query: 173 SPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
+P TQASAE*P *ET KGA DQS T P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 169 APPLTQASAE*PL*ETTKGAPDQSMGTLPFSVAQ*LPSHSVACSVMGLELG*ARS 5
Score = 69.8 bits (146), Expect(2) = 5e-028
Identities = 33/54 (61%), Positives = 35/54 (64%)
Frame = -3 / -3
Query: 350 MNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQ 189
+NQLR H AG PCGN QPSSQ*L* M* A TVPHSA S I +PA Q
Sbjct: 331 LNQLRLHPAGSPCGNLQPSSQ*L*RM*LLSAHLTVPHSALSGCLFIHAPLPAAQ 170
>gb|BZ779779.1|BZ779779 ii34e07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34e07, DNA sequence
Length = 670
Score = 113 bits (242), Expect(2) = 6e-051
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 257 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 427
Score = 108 bits (231), Expect(2) = 6e-051
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / +2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 428 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 586
Score = 67.5 bits (141), Expect(2) = 1e-022
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -3 / -2
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 435 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARS 265
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -3 / -2
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+P
Sbjct: 606 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLP 439
>gb|CW063398.1|CW063398 104_309_10521981_114_30134 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10521981, DNA
sequence
Length = 654
Score = 113 bits (242), Expect(2) = 6e-051
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / -1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 525 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 355
Score = 108 bits (231), Expect(2) = 6e-051
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / -1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 354 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 196
Score = 67.5 bits (141), Expect(2) = 1e-022
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -3 / +2
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 347 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARS 517
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -3 / +2
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+P
Sbjct: 176 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLP 343
>gb|CW301137.1|CW301137 104_784_11464043_116_36253_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464043, DNA
sequence
Length = 655
Score = 113 bits (242), Expect(2) = 6e-051
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 103 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 273
Score = 108 bits (231), Expect(2) = 6e-051
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 274 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 432
Score = 67.5 bits (141), Expect(2) = 1e-022
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -3 / -3
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 281 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARS 111
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -3 / -3
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+P
Sbjct: 452 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLP 285
>gb|CN139961.1|CN139961 OX1_33_E06.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_E06_A002 3', mRNA sequence
Length = 639
Score = 113 bits (242), Expect(2) = 6e-051
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 70 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 240
Score = 108 bits (231), Expect(2) = 6e-051
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 241 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 399
Score = 67.5 bits (141), Expect(2) = 1e-022
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -3 / -2
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 248 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARS 78
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -3 / -2
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+P
Sbjct: 419 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLP 252
>gb|AW922831.1|AW922831 DG1_46_D12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 581
Score = 113 bits (242), Expect(2) = 6e-051
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 17 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 187
Score = 108 bits (231), Expect(2) = 6e-051
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / +2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 188 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 346
Score = 67.5 bits (141), Expect(2) = 1e-022
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -3 / -3
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 195 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARS 25
Score = 60.2 bits (125), Expect(2) = 1e-022
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -3 / -3
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+P
Sbjct: 366 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLP 199
>gb|CX616461.1|CX616461 GABR1_28_C04.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_28_C04_A002 3', mRNA sequence
Length = 587
Score = 113 bits (242), Expect(2) = 5e-049
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 45 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 215
Score = 102 bits (217), Expect(2) = 5e-049
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AE GTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 216 ACRTGRDGWMHRQLDNAERGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 374
Score = 67.5 bits (141), Expect(2) = 1e-021
Identities = 36/57 (63%), Positives = 38/57 (66%)
Frame = -3 / -2
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG G ARS
Sbjct: 223 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG*ARS 53
Score = 56.5 bits (117), Expect(2) = 1e-021
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = -3 / -2
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVP SA SS I S+P
Sbjct: 394 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPRSALSSCLCIHPSLP 227
>gb|BG557261.1|BG557261 EM1_44_F08.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 559
Score = 108 bits (231), Expect(2) = 1e-048
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 160 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 318
Score = 105 bits (225), Expect(2) = 1e-048
Identities = 37/53 (69%), Positives = 45/53 (84%)
Frame = +1 / +1
Query: 13 LAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
LAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 1 LAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 159
Score = 63.4 bits (132), Expect(2) = 2e-021
Identities = 33/53 (62%), Positives = 35/53 (66%)
Frame = -3 / -3
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPG 21
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG G
Sbjct: 167 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMGLELG 9
Score = 60.2 bits (125), Expect(2) = 2e-021
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -3 / -3
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+P
Sbjct: 338 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLP 171
>gb|CF760782.1|CF760782 DSAF1_66_E10.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_66_E10_A011 5', mRNA sequence
Length = 434
Score = 151 bits (325), Expect(2) = 2e-048
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +3
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 96 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 275
Query: 355 LLV 363
++V
Sbjct: 276 IIV 284
Score = 108 bits (230), Expect(2) = 5e-031
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -2
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG +SG P+
Sbjct: 268 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHDSGAPT 92
Score = 62.0 bits (129), Expect(2) = 2e-048
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1 / +3
Query: 91 KVKVDWSAAPFAVSYRGYSADACVPDGDG 177
KVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 3 KVKVDWSNSPFVVSYRGYTADACVPTGGG 89
Score = 47.3 bits (97), Expect(2) = 5e-031
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -3 / -2
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTF 90
P P GTQASA *PR ET G DQSTFTF
Sbjct: 88 PPPVGTQASAV*PRYETTNGELDQSTFTF 2
>gb|CF428894.1|CF428894 PH1_18_D09.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_18_D09_A002 3', mRNA sequence
Length = 547
Score = 108 bits (231), Expect(2) = 1e-045
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / +3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 144 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 302
Score = 95.9 bits (203), Expect(2) = 1e-045
Identities = 33/47 (70%), Positives = 41/47 (87%)
Frame = +1 / +3
Query: 31 KPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 3 KPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 143
Score = 62.5 bits (130), Expect(2) = 3e-021
Identities = 32/49 (65%), Positives = 34/49 (69%)
Frame = -3 / -1
Query: 179 RPSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMG 33
R +P TQA A * R*ET KGA DQS P VAQ*LPSHSVAC+ MG
Sbjct: 151 RHAPPLTQALAA*LR*ETTKGAPDQSMGILPFSVAQ*LPSHSVACSVMG 5
Score = 60.2 bits (125), Expect(2) = 3e-021
Identities = 31/56 (55%), Positives = 34/56 (60%)
Frame = -3 / -1
Query: 365 DTSKPMNQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVP 198
+ S +Q R HSAG PCGN PS Q*L* M F A TVPHSA SS I S+P
Sbjct: 322 NVSVHQHQWRLHSAGSPCGNLHPSWQ*L*RMKFFSAHLTVPHSALSSCLCIHPSLP 155
>gb|BZ779778.1|BZ779778 ii34e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ii34e07, DNA sequence
Length = 647
Score = 108 bits (231), Expect(3) = 2e-045
Identities = 38/53 (71%), Positives = 42/53 (79%)
Frame = +1 / -1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
+C G D WM RQLD AEWGTV WA +N+M YNYC DGWRFPQG PAECSR+*
Sbjct: 407 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGWRFPQGLPAECSRH* 249
Score = 84.5 bits (178), Expect(3) = 2e-045
Identities = 30/46 (65%), Positives = 37/46 (80%)
Frame = +1 / -1
Query: 34 PMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
P +ATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 545 P*RCNATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 408
Score = 29.5 bits (58), Expect(3) = 2e-045
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1 / -3
Query: 1 RYPDLAYPGGKPMSV 45
RY DLAYP KPM++
Sbjct: 579 RYADLAYPSSKPMTL 535
>gb|BF422202.1|BF422202 FM1_13_B11.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 566
Score = 183 bits (395), Expect = 2e-045
Identities = 67/109 (61%), Positives = 80/109 (73%)
Frame = +1 / +2
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDGRPLSCPA 198
YP KPM+VHATLWDGSYWAT++GKV +DWS APF VSYR Y+A+AC G +
Sbjct: 2 YPDAKPMAVHATLWDGSYWATEKGKVPIDWSRAPFVVSYRAYTANACAVGGSSSCPAAAG 181
Query: 199 GTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
G + WM RQ D + TV WAR+N + YNYC+DGWRFPQGFP EC+RN*
Sbjct: 182 GGNEWMDRQADDTDRLTVDWARRNCLQYNYCEDGWRFPQGFPGECARN* 328
Score = 117 bits (251), Expect = 1e-025
Identities = 60/110 (54%), Positives = 64/110 (58%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
+QLR HS G PCG R PSSQ*L C F AQ+TV S +S+ I P P
Sbjct: 330 HQLRAHSPGNPCGKRHPSSQ*LYCKQFRRAQSTVSRSVSSACLSIHSFPPPAAAGHDDEP 151
Query: 167 SGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY 18
QA A R*ET KGA DQS T P VAQ*LPSHSVACT MGF GY
Sbjct: 150 PTAQALAVYAR*ETTKGARDQSMGTLPFSVAQ*LPSHSVACTAMGFASGY 1
>gb|CW120757.1|CW120757 104_498_11109515_148_34653_042 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11109515, DNA
sequence
Length = 679
Score = 113 bits (242), Expect(2) = 3e-045
Identities = 41/59 (69%), Positives = 47/59 (79%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
RY DL YP KPM+VHATLWDGSYWAT++GKV +DWS APF VSYR Y+A+AC G G
Sbjct: 22 RYADLPYPSSKPMAVHATLWDGSYWATEKGKVPIDWSRAPFVVSYRAYTANACAVGGGG 198
Score = 89.5 bits (189), Expect(2) = 3e-045
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +1 / +1
Query: 196 AGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
AG + WM RQ D + TV WAR+N + YNYC+DGWRFPQGFP EC+RN*
Sbjct: 229 AGGNEWMDRQPDDTDRLTVEWARRNCLQYNYCEDGWRFPQGFPGECARN* 378
>gb|BG356869.1|BG356869 OV2_11_A05.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 305
Score = 135 bits (290), Expect(2) = 1e-043
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = +1 / +3
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
RY DL YPGGKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 45 RYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 221
Score = 114 bits (244), Expect(2) = 4e-034
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = -3 / -2
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
P P GTQASA *PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY RS
Sbjct: 220 PPPVGTQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRS 53
Score = 62.0 bits (129), Expect(2) = 1e-043
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +1 / +3
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWG 246
G PLSCPAGTDRWM+RQLDAAEWG
Sbjct: 228 GAPLSCPAGTDRWMNRQLDAAEWG 299
Score = 51.0 bits (105), Expect(2) = 4e-034
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -3 / -2
Query: 248 VPHSAASSWRLIQRSVPAGQESGRPS 171
+PHSAASSWR I RSVPAG +SG P+
Sbjct: 301 LPHSAASSWRFIHRSVPAGHDSGAPT 224
>gb|AW282744.1|AW282744 LG1_292_B12.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 392
Score = 151 bits (325), Expect(2) = 3e-042
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +2
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 65 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 244
Query: 355 LLV 363
++V
Sbjct: 245 IIV 253
Score = 108 bits (230), Expect(2) = 2e-025
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG +SG P+
Sbjct: 237 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHDSGAPT 61
Score = 41.4 bits (84), Expect(2) = 3e-042
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 121 FAVSYRGYSADACVPDGDG 177
F VSYRGY+ADACVP G G
Sbjct: 2 FVVSYRGYTADACVPTGGG 58
Score = 28.6 bits (56), Expect(2) = 2e-025
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = -3 / -3
Query: 176 PSPSGTQASAE*PR*ET 126
P P GTQASA *PR ET
Sbjct: 57 PPPVGTQASAV*PRYET 7
>gb|CW451375.1|CW451375 fsbb001f191g19f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f191g19, DNA
sequence
Length = 624
Score = 113 bits (242), Expect(3) = 1e-041
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = +1 / +1
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A+ACV G
Sbjct: 235 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAANACVSGG 405
Score = 76.2 bits (160), Expect(3) = 1e-041
Identities = 27/46 (58%), Positives = 30/46 (65%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFP 324
+C G D WM RQLD AEWGTV WA +N+M YNYC DG P P
Sbjct: 406 ACRTGRDGWMHRQLDNAEWGTVRWAEKNFMRYNYCQDGVEVPARTP 543
Score = 21.7 bits (41), Expect(3) = 1e-041
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 306 IPAGLPRRVLPQLI 347
+PA PRRV P L+
Sbjct: 526 VPARTPRRVQPPLM 567
>gb|CD226629.1|CD226629 CCC1_47_H10.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_H10_A007 3', mRNA sequence
Length = 665
Score = 98.2 bits (208), Expect(2) = 1e-040
Identities = 35/49 (71%), Positives = 41/49 (83%)
Frame = +1 / +2
Query: 31 KPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
KPM+VHATLWDGSYWAT++GKV +DWS APF VSYR Y+A+AC G G
Sbjct: 8 KPMAVHATLWDGSYWATEKGKVPIDWSRAPFVVSYRAYTANACAVGGGG 154
Score = 89.5 bits (189), Expect(2) = 1e-040
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +1 / +2
Query: 196 AGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
AG + WM RQ D + TV WAR+N + YNYC+DGWRFPQGFP EC+RN*
Sbjct: 185 AGGNEWMDRQPDDTDRLTVEWARRNCLQYNYCEDGWRFPQGFPGECARN* 334
>gb|CW257134.1|CW257134 104_722_11227174_116_35151_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11227174, DNA
sequence
Length = 650
Score = 144 bits (310), Expect(2) = 1e-038
Identities = 52/57 (91%), Positives = 55/57 (96%)
Frame = +1 / +2
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN* 345
G PLSC AGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 56 GTPLSCLAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN* 226
Score = 105 bits (224), Expect(2) = 9e-024
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F LA ATVPHSAASSWR I RSVPA +SG P+
Sbjct: 228 DQFREHSAGNPCGNLHPSSQ*L*CM*FFLAHATVPHSAASSWRFIHRSVPARHDSGVPT 52
Score = 36.3 bits (73), Expect(2) = 1e-038
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 127 VSYRGYSADACVPDG 171
VSYRGY+ADACVP G
Sbjct: 2 VSYRGYTADACVPTG 46
Score = 25.8 bits (50), Expect(2) = 9e-024
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -3 / -3
Query: 170 PSGTQASAE*PR*ET 126
P GTQASA PR*ET
Sbjct: 45 PVGTQASAVYPR*ET 1
>gb|AI724073.1|AI724073 RHIZ1_26_F10.y1_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 317
Score = 152 bits (326), Expect(2) = 6e-037
Identities = 55/65 (84%), Positives = 60/65 (92%)
Frame = +1 / +1
Query: 169 GDGRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
G G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 28 GVGAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*S 207
Query: 349 IGLLV 363
++V
Sbjct: 208 ATIIV 222
Score = 113 bits (241), Expect(3) = 2e-024
Identities = 47/60 (78%), Positives = 50/60 (83%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPSP 168
+Q REHSAG PCGN PSSQ*L*CM*F LA ATVPHSAASSWR I RSVPAG +SG P+P
Sbjct: 206 DQFREHSAGNPCGNLHPSSQ*L*CM*FFLAHATVPHSAASSWRFIHRSVPAGHDSGAPTP 27
Score = 23.1 bits (44), Expect(2) = 6e-037
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +1 / +1
Query: 148 ADACVPDGDG 177
ADACVP G G
Sbjct: 1 ADACVPTGGG 30
Score = 18.9 bits (35), Expect(3) = 2e-024
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -3 / -1
Query: 176 PSPSGTQAS 150
P P GTQAS
Sbjct: 29 PPPVGTQAS 3
Score = 18.5 bits (34), Expect(3) = 2e-024
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -2
Query: 497 SIKNSGDEQ 471
SIKN GD++
Sbjct: 283 SIKNRGDQE 257
>gb|CF429486.1|CF429486 PH1_22_C12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_22_C12_A002 3', mRNA sequence
Length = 510
Score = 113 bits (241), Expect(2) = 5e-036
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / +2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C A + WM++QLD+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 92 ACAARSGAWMNKQLDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 253
Score = 59.3 bits (123), Expect(2) = 5e-036
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1 / +2
Query: 82 QQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
++GKV +DWS APF VSY+GYSADACV G
Sbjct: 2 EKGKVPIDWSGAPFVVSYKGYSADACVSGG 91
>gb|BE917851.1|BE917851 OV1_7_H07.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 278
Score = 151 bits (325), Expect = 9e-036
Identities = 54/63 (85%), Positives = 59/63 (93%)
Frame = +1 / +1
Query: 175 GRPLSCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIG 354
G PLSCPAGTDRWM+RQLDAAEWGTVAWA++NYMHYNYCDDGWRFPQGFPAECSRN*
Sbjct: 37 GAPLSCPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYNYCDDGWRFPQGFPAECSRN*SAA 216
Query: 355 LLV 363
++V
Sbjct: 217 IIV 225
Score = 108 bits (230), Expect = 1e-022
Identities = 45/59 (76%), Positives = 48/59 (81%)
Frame = -3 / -1
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAGQESGRPS 171
+Q REHSAG PCGN PSSQ*L*CM*F A ATVPHSAASSWR I RSVPAG +SG P+
Sbjct: 209 DQFREHSAGNPCGNLHPSSQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAGHDSGAPT 33
>gb|AW564403.1|AW564403 LG1_292_B12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 546
Score = 135 bits (290), Expect(2) = 2e-034
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDGDG 177
RY DL YPGGKPMSVHATLWDGSYWATQQGKVKVDWS +PF VSYRGY+ADACVP G G
Sbjct: 326 RYRDLPYPGGKPMSVHATLWDGSYWATQQGKVKVDWSNSPFVVSYRGYTADACVPTGGG 502
Score = 114 bits (244), Expect(2) = 2e-026
Identities = 47/56 (83%), Positives = 47/56 (83%)
Frame = -3 / -1
Query: 176 PSPSGTQASAE*PR*ETAKGAADQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYARS 9
P P GTQASA *PR ET G DQSTFTFPCCVAQ*LPSHSVACTDMGFPPGY RS
Sbjct: 501 PPPVGTQASAV*PRYETTNGELDQSTFTFPCCVAQ*LPSHSVACTDMGFPPGYGRS 334
Score = 31.3 bits (62), Expect(2) = 2e-034
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +1 / +2
Query: 175 GRPLSCPAGTDR 210
G PLSCPAGTDR
Sbjct: 509 GAPLSCPAGTDR 544
Score = 25.4 bits (49), Expect(2) = 2e-026
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -3 / -1
Query: 209 RSVPAGQESGRPS 171
RSVPAG +SG P+
Sbjct: 543 RSVPAGHDSGAPT 505
>gb|BM317458.1|BM317458 LG1_261_B10.g9_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 277
Score = 138 bits (295), Expect(2) = 1e-031
Identities = 48/58 (82%), Positives = 54/58 (93%)
Frame = +1 / +1
Query: 190 CPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*FIGLLV 363
CPAGTDRWM+RQLDAAEWGTVAWA++NYMHY+YC DGWRFPQGFPAECSR *F ++V
Sbjct: 1 CPAGTDRWMNRQLDAAEWGTVAWAKKNYMHYSYCGDGWRFPQGFPAECSRT*FAAIIV 174
Score = 100 bits (212), Expect(3) = 6e-021
Identities = 42/52 (80%), Positives = 43/52 (82%)
Frame = -3 / -3
Query: 347 NQLREHSAGKPCGNRQPSSQ*L*CM*FCLAQATVPHSAASSWRLIQRSVPAG 192
NQ+REHSAG PCGN PS Q*L*CM*F A ATVPHSAASSWR I RSVPAG
Sbjct: 158 NQVREHSAGNPCGNLHPSPQ*L*CM*FFFAHATVPHSAASSWRFIHRSVPAG 3
Score = 19.4 bits (36), Expect(3) = 6e-021
Identities = 5/6 (83%), Positives = 5/6 (83%)
Frame = -1 / -2
Query: 556 KCTWNG 539
KCTW G
Sbjct: 276 KCTWEG 259
Score = 18.9 bits (35), Expect(2) = 1e-031
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +3 / +2
Query: 537 LPFHVHF 557
LP HVHF
Sbjct: 257 LPSHVHF 277
Score = 18.5 bits (34), Expect(3) = 6e-021
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -3 / -3
Query: 497 SIKNSGDEQ 471
SIKN GD++
Sbjct: 236 SIKNRGDQE 210
>gb|CF432176.1|CF432176 NIT1_14_A05.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor
cDNA clone NIT1_14_A05_A002 5', mRNA sequence
Length = 440
Score = 113 bits (242), Expect(2) = 4e-031
Identities = 39/54 (72%), Positives = 45/54 (83%)
Frame = +1 / -3
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECSRN*F 348
+C AG+ WM++Q D+AEWGTV WA NYM YNYCDDGWRFPQG PAECSR+*F
Sbjct: 375 ACAAGSGAWMNKQPDSAEWGTVKWAESNYMRYNYCDDGWRFPQGLPAECSRS*F 214
Score = 42.3 bits (86), Expect(2) = 4e-031
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = +1 / -3
Query: 109 SAAPFAVSYRGYSADACVPDG 171
S APF VSY+GYSADACV G
Sbjct: 438 SGAPFVVSYKGYSADACVSGG 376
>gb|CN140043.1|CN140043 OX1_33_E06.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_33_E06_A002 5', mRNA sequence
Length = 800
Score = 112 bits (240), Expect(2) = 4e-030
Identities = 40/57 (70%), Positives = 47/57 (82%)
Frame = +1 / +2
Query: 1 RYPDLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADACVPDG 171
RY DLAYP KPM++HATLWDGSYWAT++GK+ +DWS APF VSYR Y+A ACV G
Sbjct: 566 RYADLAYPSSKPMTLHATLWDGSYWATEKGKMPIDWSGAPFVVSYRSYAAXACVSGG 736
Score = 40.0 bits (81), Expect(2) = 4e-030
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = +1 / +2
Query: 187 SCPAGTDRWMSRQLDAAEWGT 249
+C G D WM RQLD AEWGT
Sbjct: 737 ACRTGRDGWMHRQLDNAEWGT 799
>gb|BE352864.1|BE352864 LG1_267_G10.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 78.0 bits (164), Expect(2) = 7e-028
Identities = 27/50 (54%), Positives = 35/50 (70%)
Frame = +1 / -2
Query: 10 DLAYPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
D +P +PM V+A++WD WATQ G+VK DWS APF SY+GY+A C
Sbjct: 460 DRPFPTSQPMRVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 311
Score = 67.0 bits (140), Expect(2) = 7e-028
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +1 / -2
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+C WMS++LD+A G + A+ +YM YNYC D +RFPQG P ECS
Sbjct: 292 ACARSNGAWMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPECS 143
>gb|CW218469.1|CW218469 104_652_11196207_116_37528_062 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11196207, DNA
sequence
Length = 718
Score = 76.7 bits (161), Expect(2) = 2e-027
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM V+A++WD WATQ G+VK DWS APF SY+GY+A C
Sbjct: 82 FPTSQPMRVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 222
Score = 67.0 bits (140), Expect(2) = 2e-027
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+C WMS++LD+A G + A+ +YM YNYC D +RFPQG P ECS
Sbjct: 241 ACARSNGAWMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPECS 390
>gb|CN146426.1|CN146426 WOUND1_41_D07.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_41_D07_A002 3', mRNA sequence
Length = 707
Score = 76.7 bits (161), Expect(2) = 2e-027
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM V+A++WD WATQ G+VK DWS APF SY+GY+A C
Sbjct: 184 FPTSQPMRVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 324
Score = 67.0 bits (140), Expect(2) = 2e-027
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+C WMS++LD+A G + A+ +YM YNYC D +RFPQG P ECS
Sbjct: 343 ACARSNGAWMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPECS 492
>gb|BG605826.1|BG605826 RHIZ2_81_H11.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 700
Score = 76.7 bits (161), Expect(2) = 2e-027
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 19 YPGGKPMSVHATLWDGSYWATQQGKVKVDWSAAPFAVSYRGYSADAC 159
+P +PM V+A++WD WATQ G+VK DWS APF SY+GY+A C
Sbjct: 214 FPTSQPMRVYASVWDAEEWATQGGRVKTDWSKAPFVASYQGYAAAGC 354
Score = 67.0 bits (140), Expect(2) = 2e-027
Identities = 25/50 (50%), Positives = 33/50 (66%)
Frame = +1 / +1
Query: 187 SCPAGTDRWMSRQLDAAEWGTVAWARQNYMHYNYCDDGWRFPQGFPAECS 336
+C WMS++LD+A G + A+ +YM YNYC D +RFPQG P ECS
Sbjct: 373 ACARSNGAWMSQELDSAAQGQLRRAQASYMIYNYCTDKYRFPQGPPPECS 522
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 777,062,429
Number of Sequences: 832831
Number of extensions: 12005780
Number of successful extensions: 172747
Number of sequences better than 1.0e-020: 103
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21624090124
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)