TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2448387.2.1
(919 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorgh... 157 4e-084
gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methy... 157 4e-084
gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle... 232 1e-074
gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorgh... 157 2e-059
gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkal... 127 2e-041
gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkal... 72 2e-040
gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/c... 71 8e-040
gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinol... 124 5e-039
gb|CL192003.1|CL192003 104_414_10939937_114_32245_071 Sorgh... 157 3e-038
gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation... 136 8e-038
gb|CW302340.1|CW302340 104_786_11464668_148_35667_040 Sorgh... 146 4e-034
gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced ... 71 5e-034
gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkal... 129 1e-033
gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves... 95 2e-032
gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stres... 126 1e-031
gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated ... 72 1e-031
gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1... 137 3e-031
gb|CF429302.1|CF429302 PH1_21_H12.b1_A002 Phosphorous-defic... 104 2e-029
gb|CX617970.1|CX617970 GABR1_37_A07.b1_A002 GA- or brassino... 104 3e-029
gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stresse... 129 5e-029
gb|CN149206.1|CN149206 WOUND1_61_G12.b1_A002 Wounded leaves... 104 9e-029
gb|CL183652.1|CL183652 104_396_10898313_116_31924_153 Sorgh... 121 6e-028
gb|BE597253.1|BE597253 PI1_70_A05.g1_A002 Pathogen induced ... 104 8e-028
gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seed... 125 9e-028
gb|CX622317.1|CX622317 GABR1_63_F05.b2_A002 GA- or brassino... 104 1e-027
gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-defic... 124 2e-027
gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorgh... 67 5e-027
gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1... 121 2e-026
gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed see... 120 4e-026
gb|CX622403.1|CX622403 GABR1_63_F05.g2_A002 GA- or brassino... 104 2e-024
gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots S... 84 8e-023
gb|CN149290.1|CN149290 WOUND1_61_G12.g1_A002 Wounded leaves... 104 1e-021
gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stres... 79 2e-021
gb|BZ629317.1|BZ629317 ih65e07.g1 WGS-SbicolorF (DH5a methy... 104 3e-021
gb|CW229174.1|CW229174 104_670_11207164_116_37262_010 Sorgh... 104 3e-021
gb|CD207861.1|CD207861 HS1_35_C09.g1_A012 Heat-shocked seed... 104 3e-021
gb|CX618053.1|CX618053 GABR1_37_A07.g1_A002 GA- or brassino... 104 3e-021
>gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 767
Score = 157 bits (337), Expect(4) = 4e-084
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = -2 / +2
Query: 633 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILR 454
LPDEEAGEVPASCVVRRRGAPESEADMMAYVA RVASYKKLRLLRFVDAIPKSVSGKILR
Sbjct: 542 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILR 721
Query: 453 RQLRDEFVKKTAA 415
RQLRD+F+K AA
Sbjct: 722 RQLRDDFIKTAAA 760
Score = 146 bits (314), Expect(2) = 2e-065
Identities = 66/87 (75%), Positives = 66/87 (75%)
Frame = +2 / -2
Query: 659 DG*DSRMASSSAGATWKPLYLMSSLXXXXXXXXXXXXXXXXXXVWSHPAASMVRSVSSFL 838
DG*D RMASSSAGATWKPLYLMSSL VWSHPAASMV SVSSFL
Sbjct: 439 DG*DRRMASSSAGATWKPLYLMSSLIRSTMKTSPSSSMYPTSPVWSHPAASMVLSVSSFL 260
Query: 839 L**PCITAWLRTQISPGGFLGSDRPVS 919
L**PCITAWLRTQISPG FLGSDRPVS
Sbjct: 259 L**PCITAWLRTQISPGVFLGSDRPVS 179
Score = 127 bits (272), Expect(2) = 2e-065
Identities = 56/62 (90%), Positives = 56/62 (90%)
Frame = +2 / -3
Query: 416 AAVFLTNSSLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTT 595
AA L SSLSCLRRILPDTDLGMAST RSSRSFLYDATR ATYAIMSASLSGAPRRRTT
Sbjct: 759 AAAVLMKSSLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTT 580
Query: 596 HD 601
HD
Sbjct: 579 HD 574
Score = 118 bits (253), Expect(3) = 1e-043
Identities = 50/69 (72%), Positives = 53/69 (76%)
Frame = +1 / -2
Query: 430 DELVPELPPQDLAGHRLGDGVHEAQQPELLVRRNAPXXXXXXXXXXXXXXTSPHHARRRD 609
DE+VPELPPQDLAGHRLGDGVHE QQPELLVRR+A T+PHHARRRD
Sbjct: 745 DEVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRD 566
Query: 610 LAGLLVRQP 636
LAGLLVRQP
Sbjct: 565 LAGLLVRQP 539
Score = 105 bits (225), Expect(4) = 4e-084
Identities = 42/44 (95%), Positives = 42/44 (95%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTGRSLPKN PGEICVRSQAVMQGYYRRKEETE TIDAAGWLHT
Sbjct: 180 DTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGWLHT 311
Score = 77.6 bits (163), Expect(3) = 2e-044
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG
Sbjct: 366 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 464
Score = 76.7 bits (161), Expect(3) = 2e-044
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -1 / +1
Query: 526 VVQEAPAAALRGRHPQVGVRQDPAEAAQGRVRQEDGSSV 410
VVQEAPAAA+RGRHPQVGVRQDPAEAAQGR+ Q+ S V
Sbjct: 649 VVQEAPAAAVRGRHPQVGVRQDPAEAAQGRLHQDGSSLV 765
Score = 69.3 bits (145), Expect(3) = 2e-044
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -1 / +2
Query: 916 HGAVAAQEPAGGDLRAEPGRDAGLLQEEGGD 824
HGAVAAQE A GDLRAEPGRDAGLLQEEGGD
Sbjct: 182 HGAVAAQEHARGDLRAEPGRDAGLLQEEGGD 274
Score = 57.9 bits (120), Expect(4) = 4e-084
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -3 / +1
Query: 698 PLPSWRPSCCLTRPSRTPPSSG 633
PLPSWRPS CLTRPSRTPPSSG
Sbjct: 400 PLPSWRPSSCLTRPSRTPPSSG 465
Score = 57.9 bits (120), Expect(3) = 1e-043
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1 / -1
Query: 610 LAGLLVRQPEDGGVLDGRVRQQDGLQLGRG 699
+ G +R PEDGGVLDGRVRQ+DGLQLGRG
Sbjct: 488 VCGRSLRLPEDGGVLDGRVRQEDGLQLGRG 399
Score = 50.1 bits (103), Expect(4) = 4e-084
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / +2
Query: 733 QGAHQVQGLPGRPCRAGGH 677
QGAHQVQGLPG PCRAGGH
Sbjct: 365 QGAHQVQGLPGGPCRAGGH 421
Score = 44.1 bits (90), Expect(3) = 1e-043
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1 / -1
Query: 865 APHADLPRRVLGQRPPRV 918
APHADLP RVLGQRPPRV
Sbjct: 233 APHADLPGRVLGQRPPRV 180
>gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 668
Score = 157 bits (337), Expect(4) = 4e-084
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = -2 / +1
Query: 633 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILR 454
LPDEEAGEVPASCVVRRRGAPESEADMMAYVA RVASYKKLRLLRFVDAIPKSVSGKILR
Sbjct: 385 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILR 564
Query: 453 RQLRDEFVKKTAA 415
RQLRD+F+K AA
Sbjct: 565 RQLRDDFIKTAAA 603
Score = 146 bits (314), Expect(2) = 1e-065
Identities = 66/87 (75%), Positives = 66/87 (75%)
Frame = +2 / -3
Query: 659 DG*DSRMASSSAGATWKPLYLMSSLXXXXXXXXXXXXXXXXXXVWSHPAASMVRSVSSFL 838
DG*D RMASSSAGATWKPLYLMSSL VWSHPAASMV SVSSFL
Sbjct: 282 DG*DRRMASSSAGATWKPLYLMSSLIRSTMKTSPSSSMYPTSPVWSHPAASMVLSVSSFL 103
Query: 839 L**PCITAWLRTQISPGGFLGSDRPVS 919
L**PCITAWLRTQISPG FLGSDRPVS
Sbjct: 102 L**PCITAWLRTQISPGVFLGSDRPVS 22
Score = 127 bits (272), Expect(2) = 1e-065
Identities = 56/62 (90%), Positives = 56/62 (90%)
Frame = +2 / -1
Query: 416 AAVFLTNSSLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTT 595
AA L SSLSCLRRILPDTDLGMAST RSSRSFLYDATR ATYAIMSASLSGAPRRRTT
Sbjct: 602 AAAVLMKSSLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTT 423
Query: 596 HD 601
HD
Sbjct: 422 HD 417
Score = 118 bits (253), Expect(3) = 8e-044
Identities = 50/69 (72%), Positives = 53/69 (76%)
Frame = +1 / -3
Query: 430 DELVPELPPQDLAGHRLGDGVHEAQQPELLVRRNAPXXXXXXXXXXXXXXTSPHHARRRD 609
DE+VPELPPQDLAGHRLGDGVHE QQPELLVRR+A T+PHHARRRD
Sbjct: 588 DEVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRD 409
Query: 610 LAGLLVRQP 636
LAGLLVRQP
Sbjct: 408 LAGLLVRQP 382
Score = 105 bits (225), Expect(4) = 4e-084
Identities = 42/44 (95%), Positives = 42/44 (95%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTGRSLPKN PGEICVRSQAVMQGYYRRKEETE TIDAAGWLHT
Sbjct: 23 DTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGWLHT 154
Score = 77.6 bits (163), Expect(3) = 1e-044
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG
Sbjct: 209 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 307
Score = 76.7 bits (161), Expect(3) = 1e-044
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -1 / +3
Query: 526 VVQEAPAAALRGRHPQVGVRQDPAEAAQGRVRQEDGSSV 410
VVQEAPAAA+RGRHPQVGVRQDPAEAAQGR+ Q+ S V
Sbjct: 492 VVQEAPAAAVRGRHPQVGVRQDPAEAAQGRLHQDGSSLV 608
Score = 69.3 bits (145), Expect(3) = 1e-044
Identities = 29/31 (93%), Positives = 29/31 (93%)
Frame = -1 / +1
Query: 916 HGAVAAQEPAGGDLRAEPGRDAGLLQEEGGD 824
HGAVAAQE A GDLRAEPGRDAGLLQEEGGD
Sbjct: 25 HGAVAAQEHARGDLRAEPGRDAGLLQEEGGD 117
Score = 57.9 bits (120), Expect(3) = 8e-044
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1 / -2
Query: 610 LAGLLVRQPEDGGVLDGRVRQQDGLQLGRG 699
+ G +R PEDGGVLDGRVRQ+DGLQLGRG
Sbjct: 331 VCGRSLRLPEDGGVLDGRVRQEDGLQLGRG 242
Score = 57.9 bits (120), Expect(4) = 4e-084
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -3 / +3
Query: 698 PLPSWRPSCCLTRPSRTPPSSG 633
PLPSWRPS CLTRPSRTPPSSG
Sbjct: 243 PLPSWRPSSCLTRPSRTPPSSG 308
Score = 50.1 bits (103), Expect(4) = 4e-084
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / +1
Query: 733 QGAHQVQGLPGRPCRAGGH 677
QGAHQVQGLPG PCRAGGH
Sbjct: 208 QGAHQVQGLPGGPCRAGGH 264
Score = 44.1 bits (90), Expect(3) = 8e-044
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +1 / -2
Query: 865 APHADLPRRVLGQRPPRV 918
APHADLP RVLGQRPPRV
Sbjct: 76 APHADLPGRVLGQRPPRV 23
>gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 679
Score = 232 bits (500), Expect(3) = 1e-074
Identities = 101/106 (95%), Positives = 103/106 (97%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM
Sbjct: 136 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 315
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAA 415
MAYVA RVASYKKLRLLRFVDAIPKSVSGKILRRQLRD+F+K AA
Sbjct: 316 MAYVAERVASYKKLRLLRFVDAIPKSVSGKILRRQLRDDFIKTAAA 453
Score = 230 bits (496), Expect = 3e-059
Identities = 105/150 (70%), Positives = 105/150 (70%)
Frame = +2 / -3
Query: 416 AAVFLTNSSLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTT 595
AA L SSLSCLRRILPDTDLGMAST RSSRSFLYDATR ATYAIMSASLSGAPRRRTT
Sbjct: 452 AAAVLMKSSLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTT 273
Query: 596 HDXXXXXXXXXXXXXXXXXXXDG*DSRMASSSAGATWKPLYLMSSLXXXXXXXXXXXXXX 775
HD DG*D RMASSSAGATWKPLYLMSSL
Sbjct: 272 HDAGTSPASSSGSPKTAASSTDG*DRRMASSSAGATWKPLYLMSSLIRSTMKTSPSSSMY 93
Query: 776 XXXXVWSHPAASMVRSVSSFLL**PCITAW 865
VWSHPAASMV SVSSFLL**PCITAW
Sbjct: 92 PTSPVWSHPAASMVLSVSSFLL**PCITAW 3
Score = 167 bits (359), Expect = 2e-040
Identities = 70/90 (77%), Positives = 74/90 (82%)
Frame = +1 / -2
Query: 430 DELVPELPPQDLAGHRLGDGVHEAQQPELLVRRNAPXXXXXXXXXXXXXXTSPHHARRRD 609
DE+VPELPPQDLAGHRLGDGVHE QQPELLVRR+A T+PHHARRRD
Sbjct: 438 DEVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRD 259
Query: 610 LAGLLVRQPEDGGVLDGRVRQQDGLQLGRG 699
LAGLLVRQPEDGGVLDGRVRQ+DGLQLGRG
Sbjct: 258 LAGLLVRQPEDGGVLDGRVRQEDGLQLGRG 169
Score = 76.7 bits (161), Expect(4) = 4e-044
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -1 / +3
Query: 526 VVQEAPAAALRGRHPQVGVRQDPAEAAQGRVRQEDGSSV 410
VVQEAPAAA+RGRHPQVGVRQDPAEAAQGR+ Q+ S V
Sbjct: 342 VVQEAPAAAVRGRHPQVGVRQDPAEAAQGRLHQDGSSLV 458
Score = 72.1 bits (151), Expect(4) = 4e-044
Identities = 28/40 (70%), Positives = 28/40 (70%)
Frame = -3 / +2
Query: 698 PLPSWRPSCCLTRPSRTPPSSGCXXXXXXXXXXRAWCGDV 579
PLPSWRPS CLTRPSRTPPSSGC RAWCG V
Sbjct: 170 PLPSWRPSSCLTRPSRTPPSSGCRTRRPARSRRRAWCGVV 289
Score = 66.1 bits (138), Expect(3) = 1e-074
Identities = 26/27 (96%), Positives = 26/27 (96%)
Frame = -2 / +1
Query: 867 SQAVMQGYYRRKEETERTIDAAGWLHT 787
SQAVMQGYYRRKEETE TIDAAGWLHT
Sbjct: 1 SQAVMQGYYRRKEETESTIDAAGWLHT 81
Score = 50.1 bits (103), Expect(4) = 4e-044
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / +3
Query: 733 QGAHQVQGLPGRPCRAGGH 677
QGAHQVQGLPG PCRAGGH
Sbjct: 135 QGAHQVQGLPGGPCRAGGH 191
Score = 37.3 bits (75), Expect(4) = 4e-044
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = -1 / +3
Query: 865 PGRDAGLLQEEGGD 824
PGRDAGLLQEEGGD
Sbjct: 3 PGRDAGLLQEEGGD 44
Score = 23.1 bits (44), Expect(3) = 1e-074
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2 / +1
Query: 369 SARSCIRHLMKTIIQLGYS 313
SARSCIR + + LG S
Sbjct: 520 SARSCIRKPITAVSHLGRS 576
>gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188585, DNA
sequence
Length = 625
Score = 157 bits (337), Expect(4) = 2e-059
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = -2 / +3
Query: 633 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILR 454
LPDEEAGEVPASCVVRRRGAPESEADMMAYVA RVASYKKLRLLRFVDAIPKSVSGKILR
Sbjct: 180 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILR 359
Query: 453 RQLRDEFVKKTAA 415
RQLRD+F+K AA
Sbjct: 360 RQLRDDFIKTAAA 398
Score = 127 bits (272), Expect(2) = 1e-039
Identities = 56/62 (90%), Positives = 56/62 (90%)
Frame = +2 / -1
Query: 416 AAVFLTNSSLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTT 595
AA L SSLSCLRRILPDTDLGMAST RSSRSFLYDATR ATYAIMSASLSGAPRRRTT
Sbjct: 397 AAAVLMKSSLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTT 218
Query: 596 HD 601
HD
Sbjct: 217 HD 212
Score = 118 bits (253), Expect(2) = 7e-037
Identities = 50/69 (72%), Positives = 53/69 (76%)
Frame = +1 / -3
Query: 430 DELVPELPPQDLAGHRLGDGVHEAQQPELLVRRNAPXXXXXXXXXXXXXXTSPHHARRRD 609
DE+VPELPPQDLAGHRLGDGVHE QQPELLVRR+A T+PHHARRRD
Sbjct: 383 DEVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRD 204
Query: 610 LAGLLVRQP 636
LAGLLVRQP
Sbjct: 203 LAGLLVRQP 177
Score = 77.6 bits (163), Expect(2) = 9e-030
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG
Sbjct: 4 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 102
Score = 76.7 bits (161), Expect(2) = 9e-030
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = -1 / +2
Query: 526 VVQEAPAAALRGRHPQVGVRQDPAEAAQGRVRQEDGSSV 410
VVQEAPAAA+RGRHPQVGVRQDPAEAAQGR+ Q+ S V
Sbjct: 287 VVQEAPAAAVRGRHPQVGVRQDPAEAAQGRLHQDGSSLV 403
Score = 57.9 bits (120), Expect(2) = 1e-039
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1 / -2
Query: 610 LAGLLVRQPEDGGVLDGRVRQQDGLQLGRG 699
+ G +R PEDGGVLDGRVRQ+DGLQLGRG
Sbjct: 126 VCGRSLRLPEDGGVLDGRVRQEDGLQLGRG 37
Score = 57.9 bits (120), Expect(4) = 2e-059
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = -3 / +2
Query: 698 PLPSWRPSCCLTRPSRTPPSSG 633
PLPSWRPS CLTRPSRTPPSSG
Sbjct: 38 PLPSWRPSSCLTRPSRTPPSSG 103
Score = 57.0 bits (118), Expect(2) = 7e-037
Identities = 24/25 (96%), Positives = 24/25 (96%)
Frame = +2 / -3
Query: 659 DG*DSRMASSSAGATWKPLYLMSSL 733
DG*D RMASSSAGATWKPLYLMSSL
Sbjct: 77 DG*DRRMASSSAGATWKPLYLMSSL 3
Score = 50.1 bits (103), Expect(4) = 2e-059
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / +3
Query: 733 QGAHQVQGLPGRPCRAGGH 677
QGAHQVQGLPG PCRAGGH
Sbjct: 3 QGAHQVQGLPGGPCRAGGH 59
Score = 23.1 bits (44), Expect(4) = 2e-059
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2 / +3
Query: 369 SARSCIRHLMKTIIQLGYS 313
SARSCIR + + LG S
Sbjct: 465 SARSCIRKPITAVSHLGRS 521
>gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H09_A002 3', mRNA sequence
Length = 733
Score = 127 bits (272), Expect(2) = 2e-041
Identities = 55/97 (56%), Positives = 72/97 (74%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQVAPAELEA+L++HPS+ DAAV + D+ GE+P + VV G +E ++
Sbjct: 323 KELIKYKGFQVAPAELEAMLIAHPSIADAAVVPMKDDSCGEIPVAFVVTSGGYEMTEDEI 502
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
YVA +V YK+L + FV+AIPK+ SGKILR+ LR
Sbjct: 503 KQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKDLR 613
Score = 75.8 bits (159), Expect(3) = 8e-025
Identities = 40/81 (49%), Positives = 44/81 (54%)
Frame = +2 / -2
Query: 677 MASSSAGATWKPLYLMSSLXXXXXXXXXXXXXXXXXXVWSHPAASMVRSVSSFLL**PCI 856
MASSSAGATW PLYLMSSL V SHP++SMV +V+S LL P I
Sbjct: 378 MASSSAGATWNPLYLMSSLSLSTMKISSSSSTYPMSPVSSHPSSSMVFAVASGLLRYPFI 199
Query: 857 TAWLRTQISPGGFLGSDRPVS 919
QISPG D PVS
Sbjct: 198 NCLPLMQISPGWLRRRDSPVS 136
Score = 63.4 bits (132), Expect(2) = 2e-041
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG SL +N PGEIC+R + +M+GY E T +TID GWL T
Sbjct: 137 DTGLSLRRNQPGEICIRGKQLMKGYLNNPEATAKTIDDEGWLDT 268
Score = 42.8 bits (87), Expect(3) = 8e-025
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +2 / -2
Query: 440 SLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTTH 598
+L RILPD LG+ASTK++ S L + T ATY ++S+S+ P TT+
Sbjct: 615 ALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS*PPDVTTN 457
Score = 34.5 bits (69), Expect(3) = 8e-025
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +1 / -1
Query: 589 HHARRRDLAGLLVRQPEDGGVLDGRVRQQDGLQLGR 696
H R RDLA +V DGGV D V + GL+L R
Sbjct: 466 HDERHRDLAAGVVLHWHDGGVGDAGVGDEHGLELRR 359
>gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E03_A002 3', mRNA sequence
Length = 850
Score = 71.6 bits (150), Expect(3) = 2e-040
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -2 / +2
Query: 627 DEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQ 448
+ E GE+P + V + +G+ SE D+ +VA V YKK+R + F+D IPK+ SGKILR++
Sbjct: 641 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 820
Query: 447 LRDEFVKKTA 418
LR + ++ A
Sbjct: 821 LRKQLQQQVA 850
Score = 70.7 bits (148), Expect(3) = 2e-040
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = -2 / +2
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG+SL +N PGEIC+R Q +M+GY + T+ +IDA GWLHT
Sbjct: 347 DTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHT 478
Score = 63.4 bits (132), Expect(3) = 2e-040
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KE+IKYKG QVAPAE+EA+L++HPS+ DAAV G
Sbjct: 533 KEIIKYKGLQVAPAEIEALLITHPSIADAAVVG 631
>gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 3', mRNA sequence
Length = 613
Score = 70.7 bits (148), Expect(3) = 8e-040
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = -2 / +1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG+SL +N PGEIC+R Q +M+GY + T+ +IDA GWLHT
Sbjct: 115 DTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHT 246
Score = 69.8 bits (146), Expect(3) = 8e-040
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = -2 / +1
Query: 627 DEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQ 448
+ E GE+P + V + +G+ SE D+ +VA V YKK+R + F+D IPK+ SGKILR++
Sbjct: 409 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 588
Query: 447 LRDE 436
LR +
Sbjct: 589 LRKQ 600
Score = 63.4 bits (132), Expect(3) = 8e-040
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KE+IKYKG QVAPAE+EA+L++HPS+ DAAV G
Sbjct: 301 KEIIKYKGLQVAPAEIEALLITHPSIADAAVVG 399
>gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 3', mRNA sequence
Length = 693
Score = 124 bits (266), Expect(2) = 5e-039
Identities = 50/97 (51%), Positives = 72/97 (74%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEA+L++HP ++DAAV + D+ AGE+P + +VR G+ +E ++
Sbjct: 168 KEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEDEI 347
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+VA V YKK+ + F ++IPK+ SGKILR+ LR
Sbjct: 348 KQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLR 458
Score = 58.3 bits (121), Expect(2) = 5e-039
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = -2 / +3
Query: 897 KNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+N PGEIC+R + +M+GY E T+ TID GWLHT
Sbjct: 3 RNQPGEICIRGEQIMKGYLNDLESTKNTIDKDGWLHT 113
>gb|CL192003.1|CL192003 104_414_10939937_114_32245_071 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10939937, DNA
sequence
Length = 669
Score = 157 bits (337), Expect(2) = 3e-038
Identities = 68/73 (93%), Positives = 70/73 (95%)
Frame = -2 / -3
Query: 633 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILR 454
LPDEEAGEVPASCVVRRRGAPESEADMMAYVA RVASYKKLRLLRFVDAIPKSVSGKILR
Sbjct: 586 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILR 407
Query: 453 RQLRDEFVKKTAA 415
RQLRD+F+K AA
Sbjct: 406 RQLRDDFIKTAAA 368
Score = 127 bits (272), Expect = 2e-028
Identities = 56/62 (90%), Positives = 56/62 (90%)
Frame = +2 / +3
Query: 416 AAVFLTNSSLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTT 595
AA L SSLSCLRRILPDTDLGMAST RSSRSFLYDATR ATYAIMSASLSGAPRRRTT
Sbjct: 369 AAAVLMKSSLSCLRRILPDTDLGMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTT 548
Query: 596 HD 601
HD
Sbjct: 549 HD 554
Score = 118 bits (253), Expect = 1e-025
Identities = 50/69 (72%), Positives = 53/69 (76%)
Frame = +1 / +2
Query: 430 DELVPELPPQDLAGHRLGDGVHEAQQPELLVRRNAPXXXXXXXXXXXXXXTSPHHARRRD 609
DE+VPELPPQDLAGHRLGDGVHE QQPELLVRR+A T+PHHARRRD
Sbjct: 383 DEVVPELPPQDLAGHRLGDGVHEPQQPELLVRRHALRHVRHHVRLALRRATTPHHARRRD 562
Query: 610 LAGLLVRQP 636
LAGLLVRQP
Sbjct: 563 LAGLLVRQP 589
Score = 23.1 bits (44), Expect(2) = 3e-038
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2 / -3
Query: 369 SARSCIRHLMKTIIQLGYS 313
SARSCIR + + LG S
Sbjct: 301 SARSCIRKPITAVSHLGRS 245
>gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f034f02, DNA
sequence
Length = 687
Score = 136 bits (291), Expect = 6e-031
Identities = 62/87 (71%), Positives = 62/87 (71%)
Frame = +2 / +2
Query: 659 DG*DSRMASSSAGATWKPLYLMSSLXXXXXXXXXXXXXXXXXXVWSHPAASMVRSVSSFL 838
DG D RMASSSAGATWKPLYLMSSL VWS P ASMVRSVSSF
Sbjct: 143 DGWDRRMASSSAGATWKPLYLMSSLIRSTTNTSPSSSM*PTSPVWSQPLASMVRSVSSFF 322
Query: 839 L**PCITAWLRTQISPGGFLGSDRPVS 919
L**PCITAWLRTQISP FLGSDRPVS
Sbjct: 323 L**PCITAWLRTQISPAVFLGSDRPVS 403
Score = 101 bits (215), Expect(2) = 8e-038
Identities = 40/44 (90%), Positives = 41/44 (93%)
Frame = -2 / -1
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTGRSLPKN GEICVRSQAVMQGYYR+KEETERTIDA GWLHT
Sbjct: 402 DTGRSLPKNTAGEICVRSQAVMQGYYRKKEETERTIDAKGWLHT 271
Score = 77.6 bits (163), Expect(2) = 8e-038
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG
Sbjct: 216 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 118
Score = 65.2 bits (136), Expect(3) = 5e-024
Identities = 27/32 (84%), Positives = 27/32 (84%)
Frame = -1 / -3
Query: 919 RHGAVAAQEPAGGDLRAEPGRDAGLLQEEGGD 824
RHG VAAQE GDLR EPGRDAGLLQEEGGD
Sbjct: 403 RHGPVAAQEHGRGDLRPEPGRDAGLLQEEGGD 308
Score = 46.0 bits (94), Expect(3) = 5e-024
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1 / -3
Query: 733 QGAHQVQGLPGRPCRAGGH 677
QGAHQVQGLPG CRAGGH
Sbjct: 217 QGAHQVQGLPGCSCRAGGH 161
Score = 39.1 bits (79), Expect(3) = 5e-024
Identities = 15/21 (71%), Positives = 16/21 (76%)
Frame = -3 / -2
Query: 695 LPSWRPSCCLTRPSRTPPSSG 633
LPSWRP C TR S+T PSSG
Sbjct: 179 LPSWRPFSCPTRRSKTRPSSG 117
>gb|CW302340.1|CW302340 104_786_11464668_148_35667_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464668, DNA
sequence
Length = 595
Score = 146 bits (314), Expect = 4e-034
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = -2 / -1
Query: 633 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILR 454
LPDEEAGEVP SCVVRRRG+ ESEAD+MAYVAGRVASYKKLR L+FVD IPKSVSGKILR
Sbjct: 478 LPDEEAGEVPVSCVVRRRGSSESEADIMAYVAGRVASYKKLRQLQFVDVIPKSVSGKILR 299
Query: 453 RQLRDEFVKKTAAA 412
RQLRDEFV +T A
Sbjct: 298 RQLRDEFVNRTKTA 257
Score = 119 bits (254), Expect = 7e-026
Identities = 52/63 (82%), Positives = 53/63 (84%)
Frame = +2 / +3
Query: 413 AAAVFLTNSSLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRT 592
A V LTNSSLSC RRILPDTDLGM ST S RSFLYDATRPATYA+MSASLS PRRRT
Sbjct: 258 AVLVLLTNSSLSCRRRILPDTDLGMTSTNCSCRSFLYDATRPATYAMMSASLSDEPRRRT 437
Query: 593 THD 601
THD
Sbjct: 438 THD 446
Score = 105 bits (225), Expect = 7e-022
Identities = 46/68 (67%), Positives = 48/68 (70%)
Frame = +1 / +2
Query: 430 DELVPELPPQDLAGHRLGDGVHEAQQPELLVRRNAPXXXXXXXXXXXXXXTSPHHARRRD 609
DELVP+LPPQDLAGHRLGD VHE Q PELLVRR+A T PHHAR RD
Sbjct: 275 DELVPKLPPQDLAGHRLGDDVHELQLPELLVRRHATGHVRHDVCLALRRATPPHHARHRD 454
Query: 610 LAGLLVRQ 633
LAGLLVRQ
Sbjct: 455 LAGLLVRQ 478
>gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 70.7 bits (148), Expect(3) = 5e-034
Identities = 25/44 (56%), Positives = 33/44 (75%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DTG+SL +N PGEIC+R Q +M+GY + T+ +IDA GWLHT
Sbjct: 153 DTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHT 284
Score = 62.0 bits (129), Expect(3) = 5e-034
Identities = 23/33 (69%), Positives = 30/33 (90%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KE+IKYKG QVAPAE+EA+L++HPS+ DA+V G
Sbjct: 339 KEIIKYKGLQVAPAEIEALLITHPSIADASVVG 437
Score = 51.5 bits (106), Expect(3) = 5e-034
Identities = 21/51 (41%), Positives = 33/51 (64%)
Frame = -2 / +3
Query: 627 DEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKS 475
+ E GE+P + V + +G+ SE D+ +VA V YKK+R + F+D IPK+
Sbjct: 447 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKA 599
>gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_H12_A002 3', mRNA sequence
Length = 759
Score = 129 bits (277), Expect(2) = 1e-033
Identities = 54/96 (56%), Positives = 72/96 (75%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QV PAELEA+LL+H ++D AV PD E G+ P + VVR++G+ SE ++
Sbjct: 143 KELIKYKGYQVPPAELEALLLTHSEIQDVAVIPFPDREVGQFPMAYVVRKKGSNLSEREV 322
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
M +VA +VA YKK+R + FV IPK+ SGKILR+ L
Sbjct: 323 MEFVAKQVAPYKKVRKVAFVTEIPKNASGKILRKDL 430
Score = 35.0 bits (70), Expect(2) = 1e-033
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2 / +2
Query: 873 VRSQAVMQGYYRRKEETERTIDAAGWLHT 787
+R VM+GY++ E T+ T+ GWL T
Sbjct: 2 IRGPYVMKGYFKNTEATQSTLTPDGWLKT 88
>gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A03_A002 5', mRNA sequence
Length = 682
Score = 95.0 bits (201), Expect(2) = 2e-032
Identities = 37/74 (50%), Positives = 54/74 (72%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAE+EA+L++HP + DAAV + DE AGEVP + +++ G+ SE ++
Sbjct: 459 KEIIKYKGFQVPPAEVEALLITHPEIRDAAVVSMKDELAGEVPVAFIIQSEGSEISENEI 638
Query: 552 MAYVAGRVASYKKL 511
+VA V YK++
Sbjct: 639 KQFVAKEVVFYKRI 680
Score = 66.1 bits (138), Expect(2) = 2e-032
Identities = 24/44 (54%), Positives = 30/44 (68%)
Frame = -2 / +3
Query: 918 DTGRSLPKNPPGEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
DT SL +N PGEIC+R + +M+GY E T+ TID GWLHT
Sbjct: 273 DTSESLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHT 404
>gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 3', mRNA sequence
Length = 737
Score = 126 bits (270), Expect(2) = 1e-031
Identities = 55/101 (54%), Positives = 75/101 (74%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QV PAEL IL SHP + DAAV PDE+ G++P + +VR+ G+ ++ +
Sbjct: 133 KELIKYKGYQVPPAELGHILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQV 312
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFV 430
M +VA +VA YKK+R + FV AIPKS +GKILRR+L ++ V
Sbjct: 313 MDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAV 435
Score = 31.8 bits (63), Expect(2) = 1e-031
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2 / +1
Query: 858 VMQGYYRRKEETERTIDAAGWLHT 787
VM+GY E T T+D+ GWL T
Sbjct: 7 VMKGYVGDDEATAATVDSEGWLKT 78
>gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 3', mRNA sequence
Length = 652
Score = 71.6 bits (150), Expect(3) = 1e-031
Identities = 30/70 (42%), Positives = 47/70 (67%)
Frame = -2 / +2
Query: 627 DEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQ 448
+ E GE+P + V + +G+ SE D+ +VA V YKK+R + F+D IPK+ SGKILR++
Sbjct: 248 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 427
Query: 447 LRDEFVKKTA 418
LR + ++ A
Sbjct: 428 LRKQLQQQVA 457
Score = 63.4 bits (132), Expect(3) = 1e-031
Identities = 24/33 (72%), Positives = 30/33 (90%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFG 634
KE+IKYKG QVAPAE+EA+L++HPS+ DAAV G
Sbjct: 140 KEIIKYKGLQVAPAEIEALLITHPSIADAAVVG 238
Score = 40.9 bits (83), Expect(3) = 1e-031
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = -2 / +2
Query: 870 RSQAVMQGYYRRKEETERTIDAAGWLHT 787
R Q +M+GY + T+ +IDA GWLHT
Sbjct: 2 RGQQIMKGYLNNPDATKNSIDADGWLHT 85
>gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 137 bits (293), Expect = 3e-031
Identities = 57/96 (59%), Positives = 74/96 (77%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKGFQ+APAELE +LLSHP + DAAV PD EAGEVP + VVR + +E D+
Sbjct: 106 KELIKYKGFQIAPAELEGLLLSHPEILDAAVIPYPDPEAGEVPIAYVVRSPKSSLAEVDV 285
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQL 445
++ +VA YK+LR ++FVD++PKS +GKILRR+L
Sbjct: 286 QKFIEKQVAHYKRLRKVKFVDSVPKSAAGKILRREL 393
>gb|CF429302.1|CF429302 PH1_21_H12.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_21_H12_A002 3', mRNA sequence
Length = 704
Score = 104 bits (221), Expect(5) = 2e-029
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -1
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 218 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 102
Score = 28.6 bits (56), Expect(5) = 2e-029
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -1
Query: 224 KLLFLNNLSFP 192
KLLFLNNLSFP
Sbjct: 452 KLLFLNNLSFP 420
Score = 27.6 bits (54), Expect(5) = 2e-029
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2 / -2
Query: 276 ANSTPN*CIYIGVVD 232
+ ++PN*CIYI +VD
Sbjct: 499 STTSPN*CIYIAIVD 455
Score = 23.1 bits (44), Expect(5) = 2e-029
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 190 SSLPSWVDSEF 158
S + SW+DSEF
Sbjct: 393 SQISSWIDSEF 361
Score = 23.1 bits (44), Expect(5) = 2e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -1
Query: 319 VQSDVPSY*Y 290
VQSDVPSY Y
Sbjct: 596 VQSDVPSYYY 567
>gb|CX617970.1|CX617970 GABR1_37_A07.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_A07_A002 3', mRNA sequence
Length = 742
Score = 104 bits (221), Expect(5) = 3e-029
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -2
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 255 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 139
Score = 28.6 bits (56), Expect(5) = 3e-029
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 224 KLLFLNNLSFP 192
KLLFLNNLSFP
Sbjct: 489 KLLFLNNLSFP 457
Score = 27.6 bits (54), Expect(5) = 3e-029
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2 / -3
Query: 276 ANSTPN*CIYIGVVD 232
+ ++PN*CIYI +VD
Sbjct: 536 STTSPN*CIYIAIVD 492
Score = 23.1 bits (44), Expect(5) = 3e-029
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 190 SSLPSWVDSEF 158
S + SW+DSEF
Sbjct: 430 SQISSWIDSEF 398
Score = 23.1 bits (44), Expect(5) = 3e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -2
Query: 319 VQSDVPSY*Y 290
VQSDVPSY Y
Sbjct: 633 VQSDVPSYYY 604
>gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_C09_A011 5', mRNA sequence
Length = 564
Score = 129 bits (277), Expect = 5e-029
Identities = 56/101 (55%), Positives = 76/101 (75%)
Frame = -2 / +1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIKYKG+QV PAELE IL SHP + DAAV PDE+ G++P + +VR+ G+ ++ +
Sbjct: 85 KELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQV 264
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFV 430
M +VA +VA YKK+R + FV AIPKS +GKILRR+L ++ V
Sbjct: 265 MDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAV 387
>gb|CN149206.1|CN149206 WOUND1_61_G12.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_G12_A002 3', mRNA sequence
Length = 725
Score = 104 bits (221), Expect(5) = 9e-029
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -3
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 252 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 136
Score = 28.6 bits (56), Expect(5) = 9e-029
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -3
Query: 224 KLLFLNNLSFP 192
KLLFLNNLSFP
Sbjct: 486 KLLFLNNLSFP 454
Score = 25.8 bits (50), Expect(5) = 9e-029
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 276 ANSTPN*CIYIGVVD 232
+ ++PN*CIY +VD
Sbjct: 533 STTSPN*CIYFAIVD 489
Score = 23.1 bits (44), Expect(5) = 9e-029
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 190 SSLPSWVDSEF 158
S + SW+DSEF
Sbjct: 427 SQISSWIDSEF 395
Score = 23.1 bits (44), Expect(5) = 9e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 319 VQSDVPSY*Y 290
VQSDVPSY Y
Sbjct: 630 VQSDVPSYYY 601
>gb|CL183652.1|CL183652 104_396_10898313_116_31924_153 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 694
Score = 121 bits (258), Expect(3) = 6e-028
Identities = 54/60 (90%), Positives = 56/60 (93%)
Frame = -2 / -3
Query: 594 VVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLRDEFVKKTAA 415
VVRRRGAPESEADMMAYVA RVASYKKLRLLRFVDAI KSVSGKILRRQLRD+F+K AA
Sbjct: 692 VVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIXKSVSGKILRRQLRDDFIKTAAA 513
Score = 117 bits (251), Expect = 2e-025
Identities = 53/60 (88%), Positives = 53/60 (88%)
Frame = +2 / +1
Query: 416 AAVFLTNSSLSCLRRILPDTDLGMASTKRSSRSFLYDATRPATYAIMSASLSGAPRRRTT 595
AA L SSLSCLRRILPDTDL MAST RSSRSFLYDATR ATYAIMSASLSGAPRRRTT
Sbjct: 514 AAAVLMKSSLSCLRRILPDTDLXMASTNRSSRSFLYDATRSATYAIMSASLSGAPRRRTT 693
Score = 23.1 bits (44), Expect(3) = 6e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 319 VQSDVPSY*Y 290
VQSDVPSY Y
Sbjct: 41 VQSDVPSYYY 12
Score = 23.1 bits (44), Expect(3) = 6e-028
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -2 / -3
Query: 369 SARSCIRHLMKTIIQLGYS 313
SARSCIR + + LG S
Sbjct: 446 SARSCIRKPITAVSHLGRS 390
>gb|BE597253.1|BE597253 PI1_70_A05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 563
Score = 104 bits (221), Expect(4) = 8e-028
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -1
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 251 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 135
Score = 28.6 bits (56), Expect(4) = 8e-028
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -1
Query: 224 KLLFLNNLSFP 192
KLLFLNNLSFP
Sbjct: 485 KLLFLNNLSFP 453
Score = 27.6 bits (54), Expect(4) = 8e-028
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2 / -2
Query: 276 ANSTPN*CIYIGVVD 232
+ ++PN*CIYI +VD
Sbjct: 532 STTSPN*CIYIAIVD 488
Score = 23.1 bits (44), Expect(4) = 8e-028
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 190 SSLPSWVDSEF 158
S + SW+DSEF
Sbjct: 426 SQISSWIDSEF 394
>gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_H12_A012 3', mRNA sequence
Length = 559
Score = 125 bits (268), Expect = 9e-028
Identities = 50/97 (51%), Positives = 72/97 (74%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEA+L++HP ++DAAV + D+ AGE+P + +VR G+ +E ++
Sbjct: 11 KEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEGEI 190
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+VA V YKK+ + F ++IPK+ SGKILR+ LR
Sbjct: 191 KQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLR 301
>gb|CX622317.1|CX622317 GABR1_63_F05.b2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_F05_A002 3', mRNA sequence
Length = 645
Score = 104 bits (221), Expect(4) = 1e-027
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -3
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 283 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 167
Score = 28.6 bits (56), Expect(4) = 1e-027
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -3
Query: 224 KLLFLNNLSFP 192
KLLFLNNLSFP
Sbjct: 517 KLLFLNNLSFP 485
Score = 27.6 bits (54), Expect(4) = 1e-027
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 276 ANSTPN*CIYIGVVD 232
+ ++PN*CIYI +VD
Sbjct: 564 STTSPN*CIYIAIVD 520
Score = 23.1 bits (44), Expect(4) = 1e-027
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 190 SSLPSWVDSEF 158
S + SW+DSEF
Sbjct: 458 SQISSWIDSEF 426
>gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 3', mRNA sequence
Length = 591
Score = 124 bits (266), Expect = 2e-027
Identities = 50/97 (51%), Positives = 72/97 (74%)
Frame = -2 / +2
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKGFQV PAELEA+L++HP ++DAAV + D+ AGE+P + +VR G+ +E ++
Sbjct: 11 KEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEDEI 190
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+VA V YKK+ + F ++IPK+ SGKILR+ LR
Sbjct: 191 KQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLR 301
>gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 650
Score = 66.6 bits (139), Expect(3) = 5e-027
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = -2 / -3
Query: 633 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILR 454
+ D+ GE+P + VV G +E ++ YVA +V YK+L + FV+AIPK+ SGKILR
Sbjct: 324 MKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILR 145
Query: 453 RQLR 442
+ LR
Sbjct: 144 KDLR 133
Score = 65.2 bits (136), Expect(3) = 5e-027
Identities = 26/31 (83%), Positives = 30/31 (96%)
Frame = -2 / -1
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAV 640
KELIKYKGFQVAPAELEA+L++HPS+ DAAV
Sbjct: 533 KELIKYKGFQVAPAELEAMLIAHPSIADAAV 441
Score = 28.6 bits (56), Expect(3) = 5e-027
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2 / -1
Query: 831 EETERTIDAAGWLHT 787
E T +TID GWLHT
Sbjct: 632 EATAKTIDDEGWLHT 588
>gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 121 bits (258), Expect = 2e-026
Identities = 49/97 (50%), Positives = 71/97 (73%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KE+IKYKG QV PAELEA+L++HP ++DAAV + D+ AGE+P + +VR G+ +E ++
Sbjct: 66 KEIIKYKGLQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEDEI 245
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+VA V YKK+ + F ++IPK+ SGKILR+ LR
Sbjct: 246 KQFVAKEVVFYKKIHKVFFSESIPKNPSGKILRKDLR 356
>gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_37_F06_A012 3', mRNA sequence
Length = 515
Score = 120 bits (256), Expect = 4e-026
Identities = 53/97 (54%), Positives = 70/97 (72%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADM 553
KELIK+KGFQV PAELEA+L++HPS+ DAAV D+ AGEVP + VVR + +E +
Sbjct: 3 KELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEDAI 182
Query: 552 MAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRRQLR 442
+V+ +V YK+L + F +IPKS SGKILRR+LR
Sbjct: 183 KEFVSKQVVFYKRLHKVYFTPSIPKSASGKILRRELR 293
>gb|CX622403.1|CX622403 GABR1_63_F05.g2_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_63_F05_A002 5', mRNA sequence
Length = 772
Score = 104 bits (221), Expect(3) = 2e-024
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -2
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 534 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 418
Score = 28.6 bits (56), Expect(3) = 2e-024
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 224 KLLFLNNLSFP 192
KLLFLNNLSFP
Sbjct: 768 KLLFLNNLSFP 736
Score = 23.1 bits (44), Expect(3) = 2e-024
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 190 SSLPSWVDSEF 158
S + SW+DSEF
Sbjct: 709 SQISSWIDSEF 677
>gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 3', mRNA sequence
Length = 632
Score = 84.0 bits (177), Expect(2) = 8e-023
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = -2 / +3
Query: 732 KELIKYKGFQVAPAELEAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGA 574
KELIK KGFQVAPAELEAILL+HP + DAAV PDE AGEVP + VV + A
Sbjct: 246 KELIKTKGFQVAPAELEAILLTHPKIADAAVIPSPDERAGEVPKAFVVAKPNA 404
Score = 44.6 bits (91), Expect(2) = 8e-023
Identities = 17/33 (51%), Positives = 20/33 (60%)
Frame = -2 / +3
Query: 885 GEICVRSQAVMQGYYRRKEETERTIDAAGWLHT 787
GE+ +R VM GY+ E T TIDA GWL T
Sbjct: 93 GELYIRGPQVMAGYHNNPEATRETIDADGWLRT 191
>gb|CN149290.1|CN149290 WOUND1_61_G12.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_61_G12_A002 5', mRNA sequence
Length = 764
Score = 104 bits (221), Expect(2) = 1e-021
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -2
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 547 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 431
Score = 23.1 bits (44), Expect(2) = 1e-021
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 190 SSLPSWVDSEF 158
S + SW+DSEF
Sbjct: 722 SQISSWIDSEF 690
>gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_E09_A002 5', mRNA sequence
Length = 781
Score = 79.0 bits (166), Expect(2) = 2e-021
Identities = 34/62 (54%), Positives = 45/62 (72%)
Frame = -2 / +3
Query: 630 PDEEAGEVPASCVVRRRGAPESEADMMAYVAGRVASYKKLRLLRFVDAIPKSVSGKILRR 451
PD EAGEVP + VVR + +E D+ ++ +VA YKKLR + FVD++PKS SGKILRR
Sbjct: 123 PDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILRR 302
Query: 450 QL 445
+L
Sbjct: 303 EL 308
Score = 44.6 bits (91), Expect(2) = 2e-021
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = -2 / +1
Query: 714 KGFQVAPAELEAILLSHPSVEDAAV 640
KGFQ+AP ELE +LLSHP + DA V
Sbjct: 22 KGFQIAPFELEGLLLSHPEILDAVV 96
>gb|BZ629317.1|BZ629317 ih65e07.g1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 680
Score = 104 bits (221), Expect = 3e-021
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -3
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 276 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 160
>gb|CW229174.1|CW229174 104_670_11207164_116_37262_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11207164, DNA
sequence
Length = 608
Score = 104 bits (221), Expect = 3e-021
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -1
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 494 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 378
>gb|CD207861.1|CD207861 HS1_35_C09.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_35_C09_A012 5', mRNA sequence
Length = 614
Score = 104 bits (221), Expect = 3e-021
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -2
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 562 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 446
>gb|CX618053.1|CX618053 GABR1_37_A07.g1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_37_A07_A002 5', mRNA sequence
Length = 651
Score = 104 bits (221), Expect = 3e-021
Identities = 39/39 (100%), Positives = 39/39 (100%)
Frame = -1 / -1
Query: 118 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 2
FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA
Sbjct: 534 FLAGEGFFFPLPDATSSMLWPWRR*RPPDATKPGHGRYA 418
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 972,347,699
Number of Sequences: 832831
Number of extensions: 12711511
Number of successful extensions: 119094
Number of sequences better than 1.0e-020: 39
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 29495212750
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)