TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2440450.2.1
(1291 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD429950.1|CD429950 ETH1_16_E08.g1_A002 Ethylene-treated... 288 2e-084
gb|CF489433.1|CF489433 POL1_57_C05.g1_A002 Pollen Sorghum b... 288 5e-078
gb|CD429902.1|CD429902 ETH1_16_E08.b1_A002 Ethylene-treated... 149 1e-063
gb|CF489351.1|CF489351 POL1_57_C05.b1_A002 Pollen Sorghum b... 149 2e-061
gb|BG050940.1|BG050940 FM1_54_C02.b1_A003 Floral-Induced Me... 221 7e-058
gb|BE358672.1|BE358672 DG1_30_C01.g1_A002 Dark Grown 1 (DG1... 149 8e-057
gb|BG357036.1|BG357036 OV2_9_B07.b1_A002 Ovary 2 (OV2) Sorg... 208 6e-054
gb|BE358484.1|BE358484 DG1_30_C01.b1_A002 Dark Grown 1 (DG1... 185 1e-053
gb|AW671557.1|AW671557 LG1_348_C04.b1_A002 Light Grown 1 (L... 206 2e-053
gb|BF704701.1|BF704701 FM1_50_D07.b1_A003 Floral-Induced Me... 204 3e-051
gb|AW565713.1|AW565713 LG1_348_C04.g1_A002 Light Grown 1 (L... 149 5e-042
gb|BG356721.1|BG356721 OV2_9_B07.g1_A002 Ovary 2 (OV2) Sorg... 149 5e-042
gb|CD221869.1|CD221869 CCC1_71_C03.g1_A007 Callus culture/c... 165 5e-041
gb|BG051259.1|BG051259 FM1_54_C02.g1_A003 Floral-Induced Me... 122 2e-040
gb|CD219734.1|CD219734 CCC1_58_H08.g1_A007 Callus culture/c... 150 1e-038
gb|BG412034.1|BG412034 OV2_37_B11.b1_A002 Ovary 2 (OV2) Sor... 150 1e-038
gb|CF427286.1|CF427286 PH1_4_E06.g1_A002 Phosphorous-defici... 126 2e-031
gb|CD221848.1|CD221848 CCC1_71_C03.b1_A007 Callus culture/c... 109 3e-030
gb|CW483873.1|CW483873 fsbb001f245l15k0 Sorghum methylation... 90 2e-026
gb|CW334247.1|CW334247 104_832_11482399_116_36051_022 Sorgh... 83 4e-026
gb|CW488376.1|CW488376 fsbb001f254m01f0 Sorghum methylation... 81 5e-026
gb|CW422138.1|CW422138 fsbb001f131e11f0 Sorghum methylation... 90 8e-025
gb|CW270921.1|CW270921 104_742_11402710_116_35331_081 Sorgh... 90 8e-025
gb|CW059223.1|CW059223 104_302_10519191_114_30162 Sorghum m... 83 7e-024
gb|CW389606.1|CW389606 fsbb001f074o02k0 Sorghum methylation... 82 3e-023
gb|CW488377.1|CW488377 fsbb001f254m01k0 Sorghum methylation... 83 5e-023
gb|CW389605.1|CW389605 fsbb001f074o02f0 Sorghum methylation... 68 3e-021
>gb|CD429950.1|CD429950 ETH1_16_E08.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_E08_A002 5', mRNA sequence
Length = 673
Score = 288 bits (624), Expect(2) = 2e-084
Identities = 121/146 (82%), Positives = 133/146 (91%)
Frame = -2 / +1
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SGLSKGRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+RLVGRML
Sbjct: 46 PSQSTAVPESSGLSKGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRLVGRML 225
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVV 739
KV RVTDV FTL DGTGKIDVNRWENE+SDAKEMAD N+ +YVIV GGLKGFQGKRH+V
Sbjct: 226 NKVHRVTDVQFTLHDGTGKIDVNRWENESSDAKEMADVNDGDYVIVNGGLKGFQGKRHIV 405
Query: 738 AYAVRRVTNFNEITCHFLHCIQVHME 661
AY+VRRVT+FNEI HFLHCIQVH++
Sbjct: 406 AYSVRRVTDFNEIPHHFLHCIQVHLD 483
Score = 232 bits (501), Expect(2) = 7e-066
Identities = 110/161 (68%), Positives = 119/161 (73%)
Frame = -3 / +2
Query: 1133 TLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPSTAL 954
T TRSSAAGASCPHSPR SRR AAS RVGA WTRR+PA+T LISPSTAL
Sbjct: 11 TPTRSSAAGASCPHSPRRSRRAAASPRVGARRRCSRSP*NRSWTRRRPAMTNLISPSTAL 190
Query: 953 RCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR*M*IAGKXXXXXXXXXXXLITRTMS*SLA 774
RC RLGLLDAC*+R +VSQM SL MMV AR*M*I GK +T TM *S+A
Sbjct: 191 RCPRLGLLDAC*IRFTVSQMFNSLFMMVPAR*M*IVGKMSLPTLRKWLMSMTGTML*SMA 370
Query: 773 V*KVFKESAM*LPMLCGV*QTSMK*PVTFCTAFRCIWSSQG 651
V*KVFKESA+*LP LCGV*QTSMK P+TFCTAFRCIW + G
Sbjct: 371 V*KVFKESAI*LPTLCGV*QTSMKYPITFCTAFRCIWITPG 493
Score = 220 bits (474), Expect(3) = 4e-065
Identities = 91/115 (79%), Positives = 99/115 (86%)
Frame = +3 / -1
Query: 663 PYAPECSAESDRLFH*SLSHAAQHRQLHGAFLENLSNRQ*L*HSSRY*HQPSP*HRKPHF 842
P APECSAESD +FH*SLSHAAQ RQL+GAFLENLSNR *L*HS R+*HQP P* RK HF
Sbjct: 481 PDAPECSAESDGVFH*SLSHAAQSRQLYGAFLENLSNRH*L*HSPRH*HQPFP*RRKTHF 302
Query: 843 PSDSHLSCQYHHQE*IQHL*HAQPYLACVQQA*S*TPQRR*WRN*TCHRWFAPRP 1007
P+DSHLSC+YHH+E*I+HL*H +PY CVQQA* TPQRR WRN* CHRW APRP
Sbjct: 301 PNDSHLSCRYHHEE*IEHL*HGEPYSTCVQQA*PWTPQRRRWRN*ICHRWPAPRP 137
Score = 188 bits (405), Expect(3) = 5e-075
Identities = 81/95 (85%), Positives = 83/95 (87%)
Frame = +1 / -2
Query: 841 FPAIHIYLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFH 1020
FP IHIYLA TI+KSE NICDT+NL HASNKPNR HLNAVDGEIR V AGLRRVH LFH
Sbjct: 303 FPTIHIYLAGTIMKSELNICDTVNLIQHASNKPNRGHLNAVDGEIRFVIAGLRRVHDLFH 124
Query: 1021 GEREQRLRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
GEREQRLRAPTL EAA LRD RGL*GHEAPAAEER
Sbjct: 123 GEREQRLRAPTLGEAAALRDRRGL*GHEAPAAEER 19
Score = 178 bits (383), Expect(3) = 5e-072
Identities = 77/103 (74%), Positives = 83/103 (80%)
Frame = -1 / +3
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQDRCESLGK*GFRC*GDG*C**RELCHSHW 776
*GV+ *ACWTH *G CHRC IHS *WY QDRCESLGK* FR *G+G*C *R LC+S W
Sbjct: 189 *GVHG*ACWTHVE*GSPCHRCSIHSS*WYRQDRCESLGK*VFRR*GNG*CQ*RGLCYSQW 368
Query: 775 RFERFSRKAPCSCLCCAACDKLQ*NNLSLSALHSGAYGAPRVK 647
RFERFSRKAP SCL CAACD+LQ*N SLSALHSGA G+ + K
Sbjct: 369 RFERFSRKAPYSCLLCAACDRLQ*NTPSLSALHSGASGSHQAK 497
Score = 130 bits (278), Expect(4) = 3e-041
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +2 / -3
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTSL VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRPLERPL SGT VDCEG
Sbjct: 224 NMRPTSLTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRPLERPLLSGTAVDCEG 45
Query: 1100 MK 1105
MK
Sbjct: 44 MK 39
Score = 95.0 bits (201), Expect(3) = 5e-075
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1 / -2
Query: 652 PWELHMHLNAVQKVTGYFIEVCHTPHSIGNYMALSLKTFQTANDYD 789
P + MHLNAVQKV GYFIEVCHTPH +GNYMALSLKTFQTA DY+
Sbjct: 492 PGVIQMHLNAVQKVMGYFIEVCHTPHRVGNYMALSLKTFQTAIDYN 355
Score = 93.2 bits (197), Expect(3) = 5e-072
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1 / +3
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERADAAPAHRETDHGRGA
Sbjct: 36 GLHALTVHGGPGEQRPLQGSERADAAPAHRETDHGRGA 149
Score = 46.9 bits (96), Expect(2) = 2e-084
Identities = 16/25 (64%), Positives = 23/25 (92%)
Frame = -2 / +1
Query: 576 GNYISNLVLSVFHDPSVMDQEHGLH 502
GN +S+LV+SVF+DP+ +D+EHGLH
Sbjct: 598 GNNVSDLVMSVFNDPAAIDREHGLH 672
Score = 41.4 bits (84), Expect(3) = 5e-072
Identities = 16/25 (64%), Positives = 17/25 (68%)
Frame = -1 / +3
Query: 577 WKLHIQLGLECFS*PICHGPGAWTA 503
WK + LG ECF *P H PGAWTA
Sbjct: 597 WKQRV*LGHECF**PSSHRPGAWTA 671
Score = 40.9 bits (83), Expect(2) = 7e-066
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -3 / +2
Query: 590 QIRLMETTYPTWS*VFFMTHLSWTRSMDCT 501
Q L+ETT TWS*VF MT T SMDCT
Sbjct: 584 QEMLLETTCLTWS*VFLMTQQP*TGSMDCT 673
Score = 39.6 bits (80), Expect(3) = 5e-075
Identities = 17/25 (68%), Positives = 20/25 (80%)
Frame = +1 / -2
Query: 502 VQSMLLVHDRWVMKNTQDQVGYVVS 576
VQSML V+ WV+KNT DQV +VVS
Sbjct: 672 VQSMLPVYGCWVIKNTHDQVRHVVS 598
Score = 39.1 bits (79), Expect(3) = 4e-065
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +2 / -3
Query: 503 CSPCSWSMTDGS*KTLKTKLDM*FPS 580
CSPCS SM GS KTL TK D FP+
Sbjct: 671 CSPCSRSMAAGSLKTLMTKSDTLFPA 594
Score = 36.3 bits (73), Expect(4) = 3e-041
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +3 / -1
Query: 501 CAVHAPGP*QMGHEKHSRPSWICSFHQ 581
CAVHAPG +GH KHS PS F Q
Sbjct: 673 CAVHAPGLWLLGH*KHS*PSQTRCFQQ 593
Score = 34.1 bits (68), Expect(4) = 3e-041
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +2 / -3
Query: 662 SICT*MQCRK*QVISLKFVXXXXXXXXXWR 751
S CT*MQCRK* ISLK V WR
Sbjct: 482 SRCT*MQCRK*WGISLKSVTRRTE*ATIWR 393
Score = 30.4 bits (60), Expect(3) = 4e-065
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 76 CSPGPPWTV 50
Score = 26.3 bits (51), Expect(4) = 3e-041
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -3
Query: 845 QRFTSILPVP 874
QRFTSILPVP
Sbjct: 299 QRFTSILPVP 270
>gb|CF489433.1|CF489433 POL1_57_C05.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_C05_A002 5', mRNA sequence
Length = 706
Score = 288 bits (624), Expect(2) = 5e-078
Identities = 121/146 (82%), Positives = 133/146 (91%)
Frame = -2 / +2
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SGLSKGRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+RLVGRML
Sbjct: 155 PSQSTAVPESSGLSKGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRLVGRML 334
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGFQGKRHVV 739
KV RVTDV FTL DGTGKIDVNRWENE+SDAKEMAD N+ +YVIV GGLKGFQGKRH+V
Sbjct: 335 NKVHRVTDVQFTLHDGTGKIDVNRWENESSDAKEMADVNDGDYVIVNGGLKGFQGKRHIV 514
Query: 738 AYAVRRVTNFNEITCHFLHCIQVHME 661
AY+VRRVT+FNEI HFLHCIQVH++
Sbjct: 515 AYSVRRVTDFNEIPHHFLHCIQVHLD 592
Score = 234 bits (506), Expect = 2e-060
Identities = 111/163 (68%), Positives = 120/163 (73%)
Frame = -3 / +3
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPST 960
P T TRSSAAGASCPHSPR SRR AAS RVGA WTRR+PA+T LISPST
Sbjct: 114 PPTPTRSSAAGASCPHSPRRSRRAAASPRVGARRRCSRSP*NRSWTRRRPAMTNLISPST 293
Query: 959 ALRCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR*M*IAGKXXXXXXXXXXXLITRTMS*S 780
ALRC RLGLLDAC*+R +VSQM SL MMV AR*M*I GK +T TM *S
Sbjct: 294 ALRCPRLGLLDAC*IRFTVSQMFNSLFMMVPAR*M*IVGKMSLPTLRKWLMSMTGTML*S 473
Query: 779 LAV*KVFKESAM*LPMLCGV*QTSMK*PVTFCTAFRCIWSSQG 651
+AV*KVFKESA+*LP LCGV*QTSMK P+TFCTAFRCIW + G
Sbjct: 474 MAV*KVFKESAI*LPTLCGV*QTSMKYPITFCTAFRCIWITPG 602
Score = 220 bits (474), Expect(2) = 5e-059
Identities = 91/115 (79%), Positives = 99/115 (86%)
Frame = +3 / -3
Query: 663 PYAPECSAESDRLFH*SLSHAAQHRQLHGAFLENLSNRQ*L*HSSRY*HQPSP*HRKPHF 842
P APECSAESD +FH*SLSHAAQ RQL+GAFLENLSNR *L*HS R+*HQP P* RK HF
Sbjct: 590 PDAPECSAESDGVFH*SLSHAAQSRQLYGAFLENLSNRH*L*HSPRH*HQPFP*RRKTHF 411
Query: 843 PSDSHLSCQYHHQE*IQHL*HAQPYLACVQQA*S*TPQRR*WRN*TCHRWFAPRP 1007
P+DSHLSC+YHH+E*I+HL*H +PY CVQQA* TPQRR WRN* CHRW APRP
Sbjct: 410 PNDSHLSCRYHHEE*IEHL*HGEPYSTCVQQA*PWTPQRRRWRN*ICHRWPAPRP 246
Score = 188 bits (405), Expect(3) = 8e-071
Identities = 81/95 (85%), Positives = 83/95 (87%)
Frame = +1 / -1
Query: 841 FPAIHIYLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFH 1020
FP IHIYLA TI+KSE NICDT+NL HASNKPNR HLNAVDGEIR V AGLRRVH LFH
Sbjct: 412 FPTIHIYLAGTIMKSELNICDTVNLIQHASNKPNRGHLNAVDGEIRFVIAGLRRVHDLFH 233
Query: 1021 GEREQRLRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
GEREQRLRAPTL EAA LRD RGL*GHEAPAAEER
Sbjct: 232 GEREQRLRAPTLGEAAALRDRRGL*GHEAPAAEER 128
Score = 178 bits (383), Expect(3) = 1e-066
Identities = 77/103 (74%), Positives = 83/103 (80%)
Frame = -1 / +1
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQDRCESLGK*GFRC*GDG*C**RELCHSHW 776
*GV+ *ACWTH *G CHRC IHS *WY QDRCESLGK* FR *G+G*C *R LC+S W
Sbjct: 298 *GVHG*ACWTHVE*GSPCHRCSIHSS*WYRQDRCESLGK*VFRR*GNG*CQ*RGLCYSQW 477
Query: 775 RFERFSRKAPCSCLCCAACDKLQ*NNLSLSALHSGAYGAPRVK 647
RFERFSRKAP SCL CAACD+LQ*N SLSALHSGA G+ + K
Sbjct: 478 RFERFSRKAPYSCLLCAACDRLQ*NTPSLSALHSGASGSHQAK 606
Score = 130 bits (278), Expect(3) = 1e-035
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +2 / -2
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTSL VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRPLERPL SGT VDCEG
Sbjct: 333 NMRPTSLTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRPLERPLLSGTAVDCEG 154
Query: 1100 MK 1105
MK
Sbjct: 153 MK 148
Score = 95.0 bits (201), Expect(3) = 8e-071
Identities = 37/46 (80%), Positives = 40/46 (86%)
Frame = +1 / -1
Query: 652 PWELHMHLNAVQKVTGYFIEVCHTPHSIGNYMALSLKTFQTANDYD 789
P + MHLNAVQKV GYFIEVCHTPH +GNYMALSLKTFQTA DY+
Sbjct: 601 PGVIQMHLNAVQKVMGYFIEVCHTPHRVGNYMALSLKTFQTAIDYN 464
Score = 93.2 bits (197), Expect(3) = 1e-066
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1 / +1
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERADAAPAHRETDHGRGA
Sbjct: 145 GLHALTVHGGPGEQRPLQGSERADAAPAHRETDHGRGA 258
Score = 34.1 bits (68), Expect(3) = 1e-035
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +2 / -2
Query: 662 SICT*MQCRK*QVISLKFVXXXXXXXXXWR 751
S CT*MQCRK* ISLK V WR
Sbjct: 591 SRCT*MQCRK*WGISLKSVTRRTE*ATIWR 502
Score = 30.4 bits (60), Expect(2) = 5e-059
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 185 CSPGPPWTV 159
Score = 26.3 bits (51), Expect(3) = 1e-035
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 845 QRFTSILPVP 874
QRFTSILPVP
Sbjct: 408 QRFTSILPVP 379
Score = 25.4 bits (49), Expect(3) = 8e-071
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 49 PKP*ASRGRK 20
Score = 25.4 bits (49), Expect(2) = 5e-078
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 21 FLPREA*GLGLQ 56
Score = 23.1 bits (44), Expect(3) = 1e-066
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1236 PSFLGKPR 1213
PSFLGKPR
Sbjct: 19 PSFLGKPR 42
>gb|CD429902.1|CD429902 ETH1_16_E08.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_16_E08_A002 3', mRNA sequence
Length = 703
Score = 149 bits (321), Expect(5) = 1e-063
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2 / +1
Query: 576 GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 397
GN +S+LV+SVF+DP+ +D+EHGLHIKDV +RLKL +DVV A IQ HVD G+IYNTIDD
Sbjct: 283 GNNVSDLVMSVFNDPAAIDREHGLHIKDVANRLKLSEDVVRAVIQHHVDQGDIYNTIDDN 462
Query: 396 HYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 463 HFKSAANG*SCCKSSLQALCRYGAVSSKK 549
Score = 137 bits (294), Expect(5) = 3e-057
Identities = 65/90 (72%), Positives = 66/90 (73%)
Frame = +2 / -3
Query: 311 FFLETAPYLHGA*TLDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAALTTSSGSLRRSM 490
F LETAPYLH A* LDLQ HPF DL W SSIVL*M P ST* WM ALTTSS SLRR
Sbjct: 548 FLLETAPYLHRA*RLDLQHDHPFAADLKWLSSIVL*MSPWST*CWMTALTTSSDSLRRFA 369
Query: 491 TSLMCSPCSWSMTDGS*KTLKTKLDM*FPS 580
TSLMCSPCS SM GS KTL TK D FP+
Sbjct: 368 TSLMCSPCSRSMAAGSLKTLMTKSDTLFPA 279
Score = 135 bits (289), Expect(4) = 8e-056
Identities = 64/93 (68%), Positives = 70/93 (75%)
Frame = -3 / +2
Query: 590 QIRLMETTYPTWS*VFFMTHLSWTRSMDCTSKMS*IVSNYQMM*SVRPSKVMLMWATFTT 411
Q L+ETT TWS*VF MT T SMDCTSKMS IV NYQ M*S R S +ML ATFTT
Sbjct: 269 QEMLLETTCLTWS*VFLMTQQP*TGSMDCTSKMSQIVLNYQKM*SGRSSNIMLTRATFTT 448
Query: 410 QLMTSTTNLSGMDDHVASPAFRLRVGMEPFQGR 312
+LMT+ ++L MDDHVASPAFRL VGMEPFQ R
Sbjct: 449 RLMTTISSLPRMDDHVASPAFRLCVGMEPFQAR 547
Score = 105 bits (224), Expect(3) = 1e-039
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = +1 / -2
Query: 313 LP*NGSIPTRSLNAGLATWSSIPDRFXXXXXXXXXXXAHINMTLDGRTDYIIW*FETIYD 492
L *NGSIPT+SL AGLAT SSI R A +NM LD R DYI *F+TI D
Sbjct: 546 LA*NGSIPTQSLKAGLAT*SSIRGRLEMVVINRVVNVALVNMMLDDRPDYIF**FKTICD 367
Query: 493 IFDVQSMLLVHDRWVMKNTQDQVGYVVS 576
IFDVQSML V+ WV+KNT DQV +VVS
Sbjct: 366 IFDVQSMLPVYGCWVIKNTHDQVRHVVS 283
Score = 90.0 bits (190), Expect(4) = 2e-028
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -1
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 547 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 407
Score = 85.8 bits (181), Expect(5) = 3e-057
Identities = 33/40 (82%), Positives = 35/40 (87%)
Frame = +1 / -2
Query: 652 PWELHMHLNAVQKVTGYFIEVCHTPHSIGNYMALSLKTFQ 771
P + MHLNAVQKV GYFIEVCHTPH +GNYMALSLKTFQ
Sbjct: 177 PGVIQMHLNAVQKVMGYFIEVCHTPHRVGNYMALSLKTFQ 58
Score = 82.6 bits (174), Expect(3) = 1e-040
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 577 WKLHIQLGLECFS*PICHGPGAWTAHQRCHRSSQTTR*CSQCGHPRSC*CG 425
WK + LG ECF *P H PGAWTAHQRC +SS T R CSQ GHP SC* G
Sbjct: 282 WKQRV*LGHECF**PSSHRPGAWTAHQRCRKSS*TIRRCSQGGHPTSC*PG 434
Score = 80.8 bits (170), Expect(5) = 1e-063
Identities = 30/37 (81%), Positives = 35/37 (94%)
Frame = -2 / +1
Query: 771 LKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHME 661
LKGFQGKRH+VAY+VRRVT+FNEI HFLHCIQVH++
Sbjct: 58 LKGFQGKRHIVAYSVRRVTDFNEIPHHFLHCIQVHLD 168
Score = 79.9 bits (168), Expect(4) = 8e-056
Identities = 33/40 (82%), Positives = 36/40 (90%)
Frame = -3 / +2
Query: 770 *KVFKESAM*LPMLCGV*QTSMK*PVTFCTAFRCIWSSQG 651
*KVFKESA+*LP LCGV*QTSMK P+TFCTAFRCIW + G
Sbjct: 59 *KVFKESAI*LPTLCGV*QTSMKYPITFCTAFRCIWITPG 178
Score = 73.0 bits (153), Expect(3) = 1e-039
Identities = 31/36 (86%), Positives = 33/36 (91%)
Frame = +3 / -1
Query: 663 PYAPECSAESDRLFH*SLSHAAQHRQLHGAFLENLS 770
P APECSAESD +FH*SLSHAAQ RQL+GAFLENLS
Sbjct: 166 PDAPECSAESDGVFH*SLSHAAQSRQLYGAFLENLS 59
Score = 73.0 bits (153), Expect(3) = 1e-040
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -1 / +3
Query: 769 ERFSRKAPCSCLCCAACDKLQ*NNLSLSALHSGAYGAPRVK 647
ERFSRKAP SCL CAACD+LQ*N SLSALHSGA G+ + K
Sbjct: 60 ERFSRKAPYSCLLCAACDRLQ*NTPSLSALHSGASGSHQAK 182
Score = 51.5 bits (106), Expect(3) = 1e-040
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1 / +3
Query: 388 ICPEWMTTLQVQRSGSV*VWSRFKEE 311
+C EWM LQVQ SGSV*VWSRFK+E
Sbjct: 471 VCREWMIMLQVQPSGSV*VWSRFKQE 548
Score = 36.8 bits (74), Expect(4) = 2e-028
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 498 *CAVHAPGP*QMGHEKHSRPSWICSFHQ 581
*CAVHAPG +GH KHS PS F Q
Sbjct: 361 *CAVHAPGLWLLGH*KHS*PSQTRCFQQ 278
Score = 36.8 bits (74), Expect(5) = 1e-063
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = -2 / +2
Query: 828 DAKEMADANNENYVIVIGGLKGFQ 757
DAKEMAD N+ +YVIV GG K F+
Sbjct: 2 DAKEMADVNDGDYVIVNGG*KVFK 73
Score = 34.1 bits (68), Expect(4) = 2e-028
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +2 / -3
Query: 662 SICT*MQCRK*QVISLKFVXXXXXXXXXWR 751
S CT*MQCRK* ISLK V WR
Sbjct: 167 SRCT*MQCRK*WGISLKSVTRRTE*ATIWR 78
Score = 33.1 bits (66), Expect(4) = 8e-056
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = -1 / +1
Query: 829 RC*GDG*C**RELCHSHWRFERFSRK 752
R *G+G*C *R LC S WR + F K
Sbjct: 1 RR*GNG*CQ*RGLCXSQWRLKGFQGK 78
Score = 29.9 bits (59), Expect(5) = 1e-063
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 545 RNVNPLQDRLY 577
Score = 28.1 bits (55), Expect(4) = 8e-056
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 544 KKCKPSAGSPL 576
Score = 26.7 bits (52), Expect(5) = 3e-057
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 172 PAGRPSLLTSYV 207
PAGRPS +TSYV
Sbjct: 703 PAGRPSPITSYV 668
Score = 26.3 bits (51), Expect(5) = 3e-057
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 587 HMEDRGDPAEGLHF 546
Score = 25.4 bits (49), Expect(3) = 1e-039
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 598 TLMTIWKIEAILQRVYIS 545
Score = 23.5 bits (45), Expect(5) = 1e-063
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 599 VNSLTSRFRCV 631
Score = 22.6 bits (43), Expect(5) = 3e-057
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 634 RYTPKPRS*AVD 599
Score = 22.1 bits (42), Expect(4) = 2e-028
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 283 RRS*RGFTFL 312
RRS RGFTFL
Sbjct: 573 RRSCRGFTFL 544
>gb|CF489351.1|CF489351 POL1_57_C05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_57_C05_A002 3', mRNA sequence
Length = 714
Score = 149 bits (321), Expect(5) = 2e-061
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2 / +3
Query: 576 GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 397
GN +S+LV+SVF+DP+ +D+EHGLHIKDV +RLKL +DVV A IQ HVD G+IYNTIDD
Sbjct: 231 GNNVSDLVMSVFNDPAAIDREHGLHIKDVANRLKLSEDVVRAVIQHHVDQGDIYNTIDDN 410
Query: 396 HYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 411 HFKSAANG*SCCKSSLQALCRYGAVSSKK 497
Score = 137 bits (294), Expect(5) = 2e-059
Identities = 65/90 (72%), Positives = 66/90 (73%)
Frame = +2 / -3
Query: 311 FFLETAPYLHGA*TLDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAALTTSSGSLRRSM 490
F LETAPYLH A* LDLQ HPF DL W SSIVL*M P ST* WM ALTTSS SLRR
Sbjct: 496 FLLETAPYLHRA*RLDLQHDHPFAADLKWLSSIVL*MSPWST*CWMTALTTSSDSLRRFA 317
Query: 491 TSLMCSPCSWSMTDGS*KTLKTKLDM*FPS 580
TSLMCSPCS SM GS KTL TK D FP+
Sbjct: 316 TSLMCSPCSRSMAAGSLKTLMTKSDTLFPA 227
Score = 135 bits (289), Expect(4) = 2e-054
Identities = 64/93 (68%), Positives = 70/93 (75%)
Frame = -3 / +1
Query: 590 QIRLMETTYPTWS*VFFMTHLSWTRSMDCTSKMS*IVSNYQMM*SVRPSKVMLMWATFTT 411
Q L+ETT TWS*VF MT T SMDCTSKMS IV NYQ M*S R S +ML ATFTT
Sbjct: 217 QEMLLETTCLTWS*VFLMTQQP*TGSMDCTSKMSQIVLNYQKM*SGRSSNIMLTRATFTT 396
Query: 410 QLMTSTTNLSGMDDHVASPAFRLRVGMEPFQGR 312
+LMT+ ++L MDDHVASPAFRL VGMEPFQ R
Sbjct: 397 RLMTTISSLPRMDDHVASPAFRLCVGMEPFQAR 495
Score = 105 bits (224), Expect(4) = 1e-043
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = +1 / -2
Query: 313 LP*NGSIPTRSLNAGLATWSSIPDRFXXXXXXXXXXXAHINMTLDGRTDYIIW*FETIYD 492
L *NGSIPT+SL AGLAT SSI R A +NM LD R DYI *F+TI D
Sbjct: 494 LA*NGSIPTQSLKAGLAT*SSIRGRLEMVVINRVVNVALVNMMLDDRPDYIF**FKTICD 315
Query: 493 IFDVQSMLLVHDRWVMKNTQDQVGYVVS 576
IFDVQSML V+ WV+KNT DQV +VVS
Sbjct: 314 IFDVQSMLPVYGCWVIKNTHDQVRHVVS 231
Score = 90.0 bits (190), Expect(5) = 7e-031
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -1
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 495 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 355
Score = 88.1 bits (186), Expect(5) = 2e-059
Identities = 34/41 (82%), Positives = 36/41 (87%)
Frame = +1 / -2
Query: 652 PWELHMHLNAVQKVTGYFIEVCHTPHSIGNYMALSLKTFQT 774
P + MHLNAVQKV GYFIEVCHTPH +GNYMALSLKTFQT
Sbjct: 125 PGVIQMHLNAVQKVMGYFIEVCHTPHRVGNYMALSLKTFQT 3
Score = 83.5 bits (176), Expect(5) = 2e-061
Identities = 35/42 (83%), Positives = 38/42 (90%)
Frame = -3 / +1
Query: 776 AV*KVFKESAM*LPMLCGV*QTSMK*PVTFCTAFRCIWSSQG 651
AV*KVFKESA+*LP LCGV*QTSMK P+TFCTAFRCIW + G
Sbjct: 1 AV*KVFKESAI*LPTLCGV*QTSMKYPITFCTAFRCIWITPG 126
Score = 83.5 bits (176), Expect(4) = 2e-054
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = -2 / +3
Query: 774 GLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHME 661
GLKGFQGKRH+VAY+VRRVT+FNEI HFLHCIQVH++
Sbjct: 3 GLKGFQGKRHIVAYSVRRVTDFNEIPHHFLHCIQVHLD 116
Score = 82.6 bits (174), Expect(3) = 4e-042
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = -1 / +2
Query: 577 WKLHIQLGLECFS*PICHGPGAWTAHQRCHRSSQTTR*CSQCGHPRSC*CG 425
WK + LG ECF *P H PGAWTAHQRC +SS T R CSQ GHP SC* G
Sbjct: 230 WKQRV*LGHECF**PSSHRPGAWTAHQRCRKSS*TIRRCSQGGHPTSC*PG 382
Score = 78.0 bits (164), Expect(4) = 1e-043
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = +3 / -1
Query: 663 PYAPECSAESDRLFH*SLSHAAQHRQLHGAFLENLSNR 776
P APECSAESD +FH*SLSHAAQ RQL+GAFLENLSNR
Sbjct: 114 PDAPECSAESDGVFH*SLSHAAQSRQLYGAFLENLSNR 1
Score = 78.0 bits (164), Expect(3) = 4e-042
Identities = 33/43 (76%), Positives = 36/43 (83%)
Frame = -1 / +2
Query: 775 RFERFSRKAPCSCLCCAACDKLQ*NNLSLSALHSGAYGAPRVK 647
RFERFSRKAP SCL CAACD+LQ*N SLSALHSGA G+ + K
Sbjct: 2 RFERFSRKAPYSCLLCAACDRLQ*NTPSLSALHSGASGSHQAK 130
Score = 51.5 bits (106), Expect(3) = 4e-042
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1 / +2
Query: 388 ICPEWMTTLQVQRSGSV*VWSRFKEE 311
+C EWM LQVQ SGSV*VWSRFK+E
Sbjct: 419 VCREWMIMLQVQPSGSV*VWSRFKQE 496
Score = 36.8 bits (74), Expect(5) = 7e-031
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -1
Query: 498 *CAVHAPGP*QMGHEKHSRPSWICSFHQ 581
*CAVHAPG +GH KHS PS F Q
Sbjct: 309 *CAVHAPGLWLLGH*KHS*PSQTRCFQQ 226
Score = 34.1 bits (68), Expect(5) = 7e-031
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +2 / -3
Query: 662 SICT*MQCRK*QVISLKFVXXXXXXXXXWR 751
S CT*MQCRK* ISLK V WR
Sbjct: 115 SRCT*MQCRK*WGISLKSVTRRTE*ATIWR 26
Score = 31.8 bits (63), Expect(5) = 2e-059
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -1
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS +TSYV
Sbjct: 660 N*CPAGRPSPITSYV 616
Score = 29.9 bits (59), Expect(5) = 2e-061
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 493 RNVNPLQDRLY 525
Score = 28.1 bits (55), Expect(4) = 2e-054
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +3
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 492 KKCKPSAGSPL 524
Score = 26.3 bits (51), Expect(5) = 2e-061
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +2
Query: 206 T*DVSRLGLPAGHQ 165
T DV LGLPAGHQ
Sbjct: 617 TYDVIGLGLPAGHQ 658
Score = 26.3 bits (51), Expect(5) = 2e-059
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -3
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 535 HMEDRGDPAEGLHF 494
Score = 26.3 bits (51), Expect(4) = 1e-043
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 165 LMSCR*T*STHILC 206
LMS R*T*S HI+C
Sbjct: 658 LMSSR*T*SNHIIC 617
Score = 25.4 bits (49), Expect(4) = 1e-043
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -1
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 546 TLMTIWKIEAILQRVYIS 493
Score = 25.4 bits (49), Expect(5) = 7e-031
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / -2
Query: 164 TDVLQVDLVYSHLM 205
TDV QVDLV SH M
Sbjct: 659 TDVQQVDLVQSHHM 618
Score = 24.9 bits (48), Expect(4) = 2e-054
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +3
Query: 205 HKM*VD*VYLQDIS 164
H M*+D*VYL DIS
Sbjct: 618 HMM*LD*VYLLDIS 659
Score = 23.5 bits (45), Expect(5) = 2e-061
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +1
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 547 VNSLTSRFRCV 579
Score = 22.6 bits (43), Expect(5) = 2e-059
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -1
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 582 RYTPKPRS*AVD 547
Score = 22.1 bits (42), Expect(5) = 7e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 283 RRS*RGFTFL 312
RRS RGFTFL
Sbjct: 521 RRSCRGFTFL 492
>gb|BG050940.1|BG050940 FM1_54_C02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 500
Score = 221 bits (477), Expect(2) = 7e-058
Identities = 95/113 (84%), Positives = 103/113 (91%)
Frame = -2 / +2
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SGLSKGRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+RLVGRML
Sbjct: 161 PSQSTAVPESSGLSKGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRLVGRML 340
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIGGLKGF 760
KV+RVTDV FTL DGTGKIDVNRWENE+SDAKEMAD N+ +YVIV GGLKGF
Sbjct: 341 NKVQRVTDVQFTLHDGTGKIDVNRWENESSDAKEMADVNDGDYVIVNGGLKGF 499
Score = 183 bits (395), Expect(2) = 1e-046
Identities = 80/95 (84%), Positives = 81/95 (85%)
Frame = +1 / -2
Query: 841 FPAIHIYLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFH 1020
FP IHIYLA TI+KSE NICD LNL HASNKPNR HLNAVDGEIR V AGLRRVH LFH
Sbjct: 418 FPTIHIYLAGTIMKSELNICDALNLIQHASNKPNRGHLNAVDGEIRFVIAGLRRVHDLFH 239
Query: 1021 GEREQRLRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
GEREQ LRAPTL EAA LRD RGL*GHEAPAAEER
Sbjct: 238 GEREQCLRAPTLGEAAALRDRRGL*GHEAPAAEER 134
Score = 165 bits (354), Expect = 2e-039
Identities = 82/127 (64%), Positives = 87/127 (68%)
Frame = -3 / +3
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPST 960
P T TRSSAAGASCPHSPR SRR AAS RVGA WTRR+PA+T LISPST
Sbjct: 120 PPTPTRSSAAGASCPHSPRRSRRAAASPRVGARRHCSRSP*NRSWTRRRPAMTNLISPST 299
Query: 959 ALRCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR*M*IAGKXXXXXXXXXXXLITRTMS*S 780
ALRC RLGLLDAC*+R S SQM SL MMV AR*M*I GK +T TM *S
Sbjct: 300 ALRCPRLGLLDAC*IRFSASQMFNSLFMMVPAR*M*IVGKMSLLTLRKWLMSMTGTML*S 479
Query: 779 LAV*KVF 759
+AV*KVF
Sbjct: 480 MAV*KVF 500
Score = 155 bits (332), Expect(2) = 1e-039
Identities = 63/83 (75%), Positives = 70/83 (84%)
Frame = +3 / -1
Query: 759 ENLSNRQ*L*HSSRY*HQPSP*HRKPHFPSDSHLSCQYHHQE*IQHL*HAQPYLACVQQA 938
ENLSNR *L*HS R+*HQP P* +K HFP+DSHLSC+YHH+E*I+HL* A+PY CVQQA
Sbjct: 500 ENLSNRH*L*HSPRH*HQPFP*RQKTHFPNDSHLSCRYHHEE*IEHL*RAEPYSTCVQQA 321
Query: 939 *S*TPQRR*WRN*TCHRWFAPRP 1007
* TPQRR WRN* CHRW APRP
Sbjct: 320 *PWTPQRRRWRN*ICHRWPAPRP 252
Score = 130 bits (278), Expect(3) = 6e-031
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +2 / -3
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTSL VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRPLERPL SGT VDCEG
Sbjct: 339 NMRPTSLTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRPLERPLLSGTAVDCEG 160
Query: 1100 MK 1105
MK
Sbjct: 159 MK 154
Score = 108 bits (230), Expect(3) = 3e-045
Identities = 48/65 (73%), Positives = 51/65 (78%)
Frame = -1 / +1
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQDRCESLGK*GFRC*GDG*C**RELCHSHW 776
*GV+ *ACWTH *G A HRC IHS *WY QDRCESLGK* F *G+G*C *R LC+S W
Sbjct: 304 *GVHG*ACWTHVE*GSARHRCSIHSS*WYRQDRCESLGK*VF*R*GNG*CQ*RGLCYSQW 483
Query: 775 RFERF 761
RFERF
Sbjct: 484 RFERF 498
Score = 91.3 bits (193), Expect(3) = 3e-045
Identities = 36/38 (94%), Positives = 36/38 (94%)
Frame = -1 / +1
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERAD APAHRETDHGRGA
Sbjct: 151 GLHALTVHGGPGEQRPLQGSERADTAPAHRETDHGRGA 264
Score = 30.4 bits (60), Expect(2) = 1e-039
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 191 CSPGPPWTV 165
Score = 26.3 bits (51), Expect(3) = 6e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -3
Query: 845 QRFTSILPVP 874
QRFTSILPVP
Sbjct: 414 QRFTSILPVP 385
Score = 25.4 bits (49), Expect(2) = 1e-046
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 55 PKP*ASRGRK 26
Score = 25.4 bits (49), Expect(2) = 7e-058
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 27 FLPREA*GLGLQ 62
Score = 23.1 bits (44), Expect(3) = 3e-045
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1236 PSFLGKPR 1213
PSFLGKPR
Sbjct: 25 PSFLGKPR 48
Score = 21.7 bits (41), Expect(3) = 6e-031
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +1 / -2
Query: 760 KTFQTANDYD 789
KTFQTA DY+
Sbjct: 499 KTFQTAIDYN 470
>gb|BE358672.1|BE358672 DG1_30_C01.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 672
Score = 149 bits (321), Expect(5) = 8e-057
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2 / +1
Query: 576 GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 397
GN +S+LV+SVF+DP+ +D+EHGLHIKDV +RLKL +DVV A IQ HVD G+IYNTIDD
Sbjct: 208 GNNVSDLVMSVFNDPAAIDREHGLHIKDVANRLKLSEDVVRAVIQHHVDQGDIYNTIDDN 387
Query: 396 HYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 388 HFKSAANG*SCCKSSLQALCRYGAVSSKK 474
Score = 137 bits (294), Expect(5) = 8e-055
Identities = 65/90 (72%), Positives = 66/90 (73%)
Frame = +2 / -2
Query: 311 FFLETAPYLHGA*TLDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAALTTSSGSLRRSM 490
F LETAPYLH A* LDLQ HPF DL W SSIVL*M P ST* WM ALTTSS SLRR
Sbjct: 473 FLLETAPYLHRA*RLDLQHDHPFAADLKWLSSIVL*MSPWST*CWMTALTTSSDSLRRFA 294
Query: 491 TSLMCSPCSWSMTDGS*KTLKTKLDM*FPS 580
TSLMCSPCS SM GS KTL TK D FP+
Sbjct: 293 TSLMCSPCSRSMAAGSLKTLMTKSDTLFPA 204
Score = 135 bits (289), Expect(4) = 1e-048
Identities = 64/93 (68%), Positives = 70/93 (75%)
Frame = -3 / +2
Query: 590 QIRLMETTYPTWS*VFFMTHLSWTRSMDCTSKMS*IVSNYQMM*SVRPSKVMLMWATFTT 411
Q L+ETT TWS*VF MT T SMDCTSKMS IV NYQ M*S R S +ML ATFTT
Sbjct: 194 QEMLLETTCLTWS*VFLMTQQP*TGSMDCTSKMSQIVLNYQKM*SGRSSNIMLTRATFTT 373
Query: 410 QLMTSTTNLSGMDDHVASPAFRLRVGMEPFQGR 312
+LMT+ ++L MDDHVASPAFRL VGMEPFQ R
Sbjct: 374 RLMTTISSLPRMDDHVASPAFRLCVGMEPFQAR 472
Score = 105 bits (224), Expect(4) = 3e-038
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = +1 / -1
Query: 313 LP*NGSIPTRSLNAGLATWSSIPDRFXXXXXXXXXXXAHINMTLDGRTDYIIW*FETIYD 492
L *NGSIPT+SL AGLAT SSI R A +NM LD R DYI *F+TI D
Sbjct: 471 LA*NGSIPTQSLKAGLAT*SSIRGRLEMVVINRVVNVALVNMMLDDRPDYIF**FKTICD 292
Query: 493 IFDVQSMLLVHDRWVMKNTQDQVGYVVS 576
IFDVQSML V+ WV+KNT DQV +VVS
Sbjct: 291 IFDVQSMLPVYGCWVIKNTHDQVRHVVS 208
Score = 90.0 bits (190), Expect(5) = 7e-031
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -3
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 472 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 332
Score = 82.6 bits (174), Expect(3) = 2e-036
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 577 WKLHIQLGLECFS*PICHGPGAWTAHQRCHRSSQTTR*CSQCGHPRSC*CG 425
WK + LG ECF *P H PGAWTAHQRC +SS T R CSQ GHP SC* G
Sbjct: 207 WKQRV*LGHECF**PSSHRPGAWTAHQRCRKSS*TIRRCSQGGHPTSC*PG 359
Score = 72.5 bits (152), Expect(5) = 8e-055
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1 / -1
Query: 652 PWELHMHLNAVQKVTGYFIEVCHTPHSIGNYMAL 753
P + MHLNAVQKV GYFIEVCHTPH +GNYMAL
Sbjct: 102 PGVIQMHLNAVQKVMGYFIEVCHTPHRVGNYMAL 1
Score = 68.0 bits (142), Expect(5) = 8e-057
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = -3 / +2
Query: 752 SAM*LPMLCGV*QTSMK*PVTFCTAFRCIWSSQG 651
SA+*LP LCGV*QTSMK P+TFCTAFRCIW + G
Sbjct: 2 SAI*LPTLCGV*QTSMKYPITFCTAFRCIWITPG 103
Score = 63.8 bits (133), Expect(4) = 1e-048
Identities = 23/30 (76%), Positives = 28/30 (93%)
Frame = -2 / +1
Query: 750 RHVVAYAVRRVTNFNEITCHFLHCIQVHME 661
RH+VAY+VRRVT+FNEI HFLHCIQVH++
Sbjct: 4 RHIVAYSVRRVTDFNEIPHHFLHCIQVHLD 93
Score = 59.7 bits (124), Expect(4) = 3e-038
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = +3 / -3
Query: 663 PYAPECSAESDRLFH*SLSHAAQHRQLHGA 752
P APECSAESD +FH*SLSHAAQ RQL+GA
Sbjct: 91 PDAPECSAESDGVFH*SLSHAAQSRQLYGA 2
Score = 59.3 bits (123), Expect(3) = 2e-036
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = -1 / +3
Query: 751 APCSCLCCAACDKLQ*NNLSLSALHSGAYGAPRVK 647
AP SCL CAACD+LQ*N SLSALHSGA G+ + K
Sbjct: 3 APYSCLLCAACDRLQ*NTPSLSALHSGASGSHQAK 107
Score = 51.5 bits (106), Expect(3) = 2e-036
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1 / +3
Query: 388 ICPEWMTTLQVQRSGSV*VWSRFKEE 311
+C EWM LQVQ SGSV*VWSRFK+E
Sbjct: 396 VCREWMIMLQVQPSGSV*VWSRFKQE 473
Score = 36.8 bits (74), Expect(5) = 7e-031
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -3
Query: 498 *CAVHAPGP*QMGHEKHSRPSWICSFHQ 581
*CAVHAPG +GH KHS PS F Q
Sbjct: 286 *CAVHAPGLWLLGH*KHS*PSQTRCFQQ 203
Score = 34.1 bits (68), Expect(5) = 7e-031
Identities = 17/30 (56%), Positives = 17/30 (56%)
Frame = +2 / -2
Query: 662 SICT*MQCRK*QVISLKFVXXXXXXXXXWR 751
S CT*MQCRK* ISLK V WR
Sbjct: 92 SRCT*MQCRK*WGISLKSVTRRTE*ATIWR 3
Score = 31.8 bits (63), Expect(5) = 8e-055
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS +TSYV
Sbjct: 637 N*CPAGRPSPITSYV 593
Score = 29.9 bits (59), Expect(5) = 8e-057
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 470 RNVNPLQDRLY 502
Score = 28.1 bits (55), Expect(4) = 1e-048
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 469 KKCKPSAGSPL 501
Score = 26.3 bits (51), Expect(5) = 8e-057
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +3
Query: 206 T*DVSRLGLPAGHQ 165
T DV LGLPAGHQ
Sbjct: 594 TYDVIGLGLPAGHQ 635
Score = 26.3 bits (51), Expect(5) = 8e-055
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 512 HMEDRGDPAEGLHF 471
Score = 26.3 bits (51), Expect(4) = 3e-038
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 165 LMSCR*T*STHILC 206
LMS R*T*S HI+C
Sbjct: 635 LMSSR*T*SNHIIC 594
Score = 25.4 bits (49), Expect(4) = 3e-038
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 523 TLMTIWKIEAILQRVYIS 470
Score = 25.4 bits (49), Expect(5) = 7e-031
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 164 TDVLQVDLVYSHLM 205
TDV QVDLV SH M
Sbjct: 636 TDVQQVDLVQSHHM 595
Score = 24.9 bits (48), Expect(4) = 1e-048
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 205 HKM*VD*VYLQDIS 164
H M*+D*VYL DIS
Sbjct: 595 HMM*LD*VYLLDIS 636
Score = 23.5 bits (45), Expect(5) = 8e-057
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 524 VNSLTSRFRCV 556
Score = 22.6 bits (43), Expect(5) = 8e-055
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 559 RYTPKPRS*AVD 524
Score = 22.1 bits (42), Expect(5) = 7e-031
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 283 RRS*RGFTFL 312
RRS RGFTFL
Sbjct: 498 RRSCRGFTFL 469
>gb|BG357036.1|BG357036 OV2_9_B07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 484
Score = 208 bits (448), Expect(2) = 6e-054
Identities = 90/108 (83%), Positives = 97/108 (89%)
Frame = -2 / +3
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SGLSKGRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+RLVGRML
Sbjct: 159 PSQSTAVPESSGLSKGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRLVGRML 338
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIVIG 775
KV RVTDV FTL DGTGKIDVNRWENE+SDAKEMAD N+ +YVIV G
Sbjct: 339 NKVHRVTDVQFTLHDGTGKIDVNRWENESSDAKEMADVNDGDYVIVNG 482
Score = 188 bits (405), Expect(2) = 5e-048
Identities = 81/95 (85%), Positives = 83/95 (87%)
Frame = +1 / -3
Query: 841 FPAIHIYLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFH 1020
FP IHIYLA TI+KSE NICDT+NL HASNKPNR HLNAVDGEIR V AGLRRVH LFH
Sbjct: 416 FPTIHIYLAGTIMKSELNICDTVNLIQHASNKPNRGHLNAVDGEIRFVIAGLRRVHDLFH 237
Query: 1021 GEREQRLRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
GEREQRLRAPTL EAA LRD RGL*GHEAPAAEER
Sbjct: 236 GEREQRLRAPTLGEAAALRDRRGL*GHEAPAAEER 132
Score = 155 bits (334), Expect = 1e-036
Identities = 77/122 (63%), Positives = 83/122 (68%)
Frame = -3 / +1
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPST 960
P T TRSSAAGASCPHSPR SRR AAS RVGA WTRR+PA+T LISPST
Sbjct: 118 PPTPTRSSAAGASCPHSPRRSRRAAASPRVGARRRCSRSP*NRSWTRRRPAMTNLISPST 297
Query: 959 ALRCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR*M*IAGKXXXXXXXXXXXLITRTMS*S 780
ALRC RLGLLDAC*+R +VSQM SL MMV AR*M*I GK +T TM *S
Sbjct: 298 ALRCPRLGLLDAC*IRFTVSQMFNSLFMMVPAR*M*IVGKMSLPTLRKWLMSMTGTML*S 477
Query: 779 LA 774
+A
Sbjct: 478 MA 483
Score = 147 bits (315), Expect(2) = 3e-037
Identities = 59/78 (75%), Positives = 65/78 (83%)
Frame = +3 / -2
Query: 774 RQ*L*HSSRY*HQPSP*HRKPHFPSDSHLSCQYHHQE*IQHL*HAQPYLACVQQA*S*TP 953
R *L*HS R+*HQP P* RK HFP+DSHLSC+YHH+E*I+HL*H +PY CVQQA* TP
Sbjct: 483 RH*L*HSPRH*HQPFP*RRKTHFPNDSHLSCRYHHEE*IEHL*HGEPYSTCVQQA*PWTP 304
Query: 954 QRR*WRN*TCHRWFAPRP 1007
QRR WRN* CHRW APRP
Sbjct: 303 QRRRWRN*ICHRWPAPRP 250
Score = 130 bits (278), Expect(2) = 6e-031
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +2 / -1
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTSL VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRPLERPL SGT VDCEG
Sbjct: 337 NMRPTSLTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRPLERPLLSGTAVDCEG 158
Query: 1100 MK 1105
MK
Sbjct: 157 MK 152
Score = 105 bits (224), Expect(3) = 6e-045
Identities = 45/61 (73%), Positives = 48/61 (78%)
Frame = -1 / +2
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQDRCESLGK*GFRC*GDG*C**RELCHSHW 776
*GV+ *ACWTH *G CHRC IHS *WY QDRCESLGK* FR *G+G*C *R LC+S W
Sbjct: 302 *GVHG*ACWTHVE*GSPCHRCSIHSS*WYRQDRCESLGK*VFRR*GNG*CQ*RGLCYSQW 481
Query: 775 R 773
R
Sbjct: 482 R 484
Score = 93.2 bits (197), Expect(3) = 6e-045
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1 / +2
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERADAAPAHRETDHGRGA
Sbjct: 149 GLHALTVHGGPGEQRPLQGSERADAAPAHRETDHGRGA 262
Score = 30.4 bits (60), Expect(2) = 3e-037
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -2
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 189 CSPGPPWTV 163
Score = 26.3 bits (51), Expect(2) = 6e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -1
Query: 845 QRFTSILPVP 874
QRFTSILPVP
Sbjct: 412 QRFTSILPVP 383
Score = 25.4 bits (49), Expect(2) = 5e-048
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -3
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 53 PKP*ASRGRK 24
Score = 25.4 bits (49), Expect(2) = 6e-054
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 25 FLPREA*GLGLQ 60
Score = 23.1 bits (44), Expect(3) = 6e-045
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 1236 PSFLGKPR 1213
PSFLGKPR
Sbjct: 23 PSFLGKPR 46
>gb|BE358484.1|BE358484 DG1_30_C01.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 554
Score = 185 bits (399), Expect(3) = 1e-053
Identities = 80/94 (85%), Positives = 82/94 (87%)
Frame = +1 / -1
Query: 844 PAIHIYLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFHG 1023
P IHIYLA TI+KSE NICDT+NL HASNKPNR HLNAVDGEIR V AGLRRVH LFHG
Sbjct: 407 PTIHIYLAGTIMKSELNICDTVNLIQHASNKPNRGHLNAVDGEIRFVIAGLRRVHDLFHG 228
Query: 1024 EREQRLRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
EREQRLRAPTL EAA LRD RGL*GHEAPAAEER
Sbjct: 227 EREQRLRAPTLGEAAALRDRRGL*GHEAPAAEER 126
Score = 169 bits (364), Expect(3) = 3e-049
Identities = 73/85 (85%), Positives = 77/85 (90%)
Frame = -2 / +3
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SGLSKGRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+RLVGRML
Sbjct: 153 PSQSTAVPESSGLSKGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRLVGRML 332
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRW 844
KV RVTDV FTL DGTGKIDVNRW
Sbjct: 333 NKVHRVTDVQFTLHDGTGKIDVNRW 407
Score = 149 bits (319), Expect(3) = 1e-040
Identities = 70/100 (70%), Positives = 75/100 (75%)
Frame = -3 / +1
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPST 960
P T TRSSAAGASCPHSPR SRR AAS RVGA WTRR+PA+T LISPST
Sbjct: 112 PPTPTRSSAAGASCPHSPRRSRRAAASPRVGARRRCSRSP*NRSWTRRRPAMTNLISPST 291
Query: 959 ALRCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR*M*IAGK 840
ALRC RLGLLDAC*+R +VSQM SL MMV AR*M*I G+
Sbjct: 292 ALRCPRLGLLDAC*IRFTVSQMFNSLFMMVPAR*M*IVGR 411
Score = 130 bits (278), Expect(2) = 6e-031
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +2 / -2
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTSL VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRPLERPL SGT VDCEG
Sbjct: 331 NMRPTSLTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRPLERPLLSGTAVDCEG 152
Query: 1100 MK 1105
MK
Sbjct: 151 MK 146
Score = 109 bits (232), Expect(2) = 6e-026
Identities = 42/57 (73%), Positives = 47/57 (82%)
Frame = +3 / -3
Query: 837 HFPSDSHLSCQYHHQE*IQHL*HAQPYLACVQQA*S*TPQRR*WRN*TCHRWFAPRP 1007
H +DSHLSC+YHH+E*I+HL*H +PY CVQQA* TPQRR WRN* CHRW APRP
Sbjct: 414 HPTNDSHLSCRYHHEE*IEHL*HGEPYSTCVQQA*PWTPQRRRWRN*ICHRWPAPRP 244
Score = 93.2 bits (197), Expect(2) = 4e-033
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1 / +2
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERADAAPAHRETDHGRGA
Sbjct: 143 GLHALTVHGGPGEQRPLQGSERADAAPAHRETDHGRGA 256
Score = 70.7 bits (148), Expect(2) = 4e-033
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = -1 / +2
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQDRCESL 845
*GV+ *ACWTH *G CHRC IHS *WY QDRCESL
Sbjct: 296 *GVHG*ACWTHVE*GSPCHRCSIHSS*WYRQDRCESL 406
Score = 41.4 bits (84), Expect(3) = 3e-049
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -2 / +3
Query: 843 ENEASDAKEMADANNENYVIVIG 775
ENE+SDAKEMAD N+ +YVIV G
Sbjct: 486 ENESSDAKEMADVNDGDYVIVNG 554
Score = 40.0 bits (81), Expect(3) = 1e-053
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3 / -3
Query: 780 *L*HSSRY*HQPSP*HRKPHFP 845
*L*HS R+*HQP P* RK HFP
Sbjct: 549 *L*HSPRH*HQPFP*RRKTHFP 484
Score = 35.4 bits (71), Expect(3) = 1e-040
Identities = 16/23 (69%), Positives = 18/23 (78%)
Frame = -1 / +2
Query: 844 GK*GFRC*GDG*C**RELCHSHW 776
GK* FR *G+G*C *R LC+S W
Sbjct: 485 GK*VFRR*GNG*CQ*RGLCYSQW 553
Score = 30.4 bits (60), Expect(2) = 6e-026
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 183 CSPGPPWTV 157
Score = 26.3 bits (51), Expect(2) = 6e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 845 QRFTSILPVP 874
QRFTSILPVP
Sbjct: 406 QRFTSILPVP 377
Score = 25.4 bits (49), Expect(3) = 1e-053
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 47 PKP*ASRGRK 18
Score = 25.4 bits (49), Expect(3) = 3e-049
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 19 FLPREA*GLGLQ 54
Score = 23.1 bits (44), Expect(3) = 1e-040
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +2
Query: 1236 PSFLGKPR 1213
PSFLGKPR
Sbjct: 17 PSFLGKPR 40
>gb|AW671557.1|AW671557 LG1_348_C04.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 484
Score = 206 bits (445), Expect(2) = 2e-053
Identities = 89/106 (83%), Positives = 96/106 (90%)
Frame = -2 / +1
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SGLSKGRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+RLVGRML
Sbjct: 163 PSQSTAVPESSGLSKGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRLVGRML 342
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVIV 781
KV RVTDV FTL DGTGKIDVNRWENE+SDAKEMAD N+ +YVIV
Sbjct: 343 NKVHRVTDVQFTLHDGTGKIDVNRWENESSDAKEMADVNDGDYVIV 480
Score = 188 bits (405), Expect(2) = 2e-048
Identities = 81/95 (85%), Positives = 83/95 (87%)
Frame = +1 / -2
Query: 841 FPAIHIYLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFH 1020
FP IHIYLA TI+KSE NICDT+NL HASNKPNR HLNAVDGEIR V AGLRRVH LFH
Sbjct: 420 FPTIHIYLAGTIMKSELNICDTVNLIQHASNKPNRGHLNAVDGEIRFVIAGLRRVHDLFH 241
Query: 1021 GEREQRLRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
GEREQRLRAPTL EAA LRD RGL*GHEAPAAEER
Sbjct: 240 GEREQRLRAPTLGEAAALRDRRGL*GHEAPAAEER 136
Score = 154 bits (330), Expect = 4e-036
Identities = 76/121 (62%), Positives = 82/121 (67%)
Frame = -3 / +2
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPST 960
P T TRSSAAGASCPHSPR SRR AAS RVGA WTRR+PA+T LISPST
Sbjct: 122 PPTPTRSSAAGASCPHSPRRSRRAAASPRVGARRRCSRSP*NRSWTRRRPAMTNLISPST 301
Query: 959 ALRCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR*M*IAGKXXXXXXXXXXXLITRTMS*S 780
ALRC RLGLLDAC*+R +VSQM SL MMV AR*M*I GK +T TM *S
Sbjct: 302 ALRCPRLGLLDAC*IRFTVSQMFNSLFMMVPAR*M*IVGKMSLPTLRKWLMSMTGTML*S 481
Query: 779 L 777
+
Sbjct: 482 M 484
Score = 144 bits (310), Expect(2) = 1e-036
Identities = 58/76 (76%), Positives = 64/76 (84%)
Frame = +3 / -1
Query: 780 *L*HSSRY*HQPSP*HRKPHFPSDSHLSCQYHHQE*IQHL*HAQPYLACVQQA*S*TPQR 959
*L*HS R+*HQP P* RK HFP+DSHLSC+YHH+E*I+HL*H +PY CVQQA* TPQR
Sbjct: 481 *L*HSPRH*HQPFP*RRKTHFPNDSHLSCRYHHEE*IEHL*HGEPYSTCVQQA*PWTPQR 302
Query: 960 R*WRN*TCHRWFAPRP 1007
R WRN* CHRW APRP
Sbjct: 301 RRWRN*ICHRWPAPRP 254
Score = 130 bits (278), Expect(2) = 6e-031
Identities = 54/62 (87%), Positives = 56/62 (90%)
Frame = +2 / -3
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTSL VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRPLERPL SGT VDCEG
Sbjct: 341 NMRPTSLTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRPLERPLLSGTAVDCEG 162
Query: 1100 MK 1105
MK
Sbjct: 161 MK 156
Score = 98.2 bits (208), Expect(3) = 9e-043
Identities = 43/58 (74%), Positives = 46/58 (79%)
Frame = -1 / +3
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQDRCESLGK*GFRC*GDG*C**RELCHS 782
*GV+ *ACWTH *G CHRC IHS *WY QDRCESLGK* FR *G+G*C *R LC+S
Sbjct: 306 *GVHG*ACWTHVE*GSPCHRCSIHSS*WYRQDRCESLGK*VFRR*GNG*CQ*RGLCYS 479
Score = 93.2 bits (197), Expect(3) = 9e-043
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1 / +3
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERADAAPAHRETDHGRGA
Sbjct: 153 GLHALTVHGGPGEQRPLQGSERADAAPAHRETDHGRGA 266
Score = 30.4 bits (60), Expect(2) = 1e-036
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 193 CSPGPPWTV 167
Score = 26.7 bits (52), Expect(2) = 2e-048
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 1206 PKP*ASRGRKEQKEKGREC 1262
PKP*ASRGRK ++ C
Sbjct: 57 PKP*ASRGRKGGAKERASC 1
Score = 26.3 bits (51), Expect(2) = 6e-031
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -3
Query: 845 QRFTSILPVP 874
QRFTSILPVP
Sbjct: 416 QRFTSILPVP 387
Score = 25.4 bits (49), Expect(2) = 2e-053
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +2
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 29 FLPREA*GLGLQ 64
Score = 23.1 bits (44), Expect(3) = 9e-043
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +3
Query: 1236 PSFLGKPR 1213
PSFLGKPR
Sbjct: 27 PSFLGKPR 50
>gb|BF704701.1|BF704701 FM1_50_D07.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum propinquum
cDNA, mRNA sequence
Length = 446
Score = 204 bits (439), Expect = 3e-051
Identities = 87/105 (82%), Positives = 95/105 (90%)
Frame = -2 / +3
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SGLSKGRSAQTLLP TVKQ MDAAQ S D+SNFAI+GVEVST+RLVGRML
Sbjct: 132 PSQSTAVPESSGLSKGRSAQTLLPFTVKQIMDAAQASDDKSNFAIDGVEVSTVRLVGRML 311
Query: 918 GKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNENYVI 784
KV+RVTDV FTL DGTGKIDVNRWENE+SDAKEMAD N+ +YVI
Sbjct: 312 NKVQRVTDVQFTLHDGTGKIDVNRWENESSDAKEMADVNDGDYVI 446
Score = 183 bits (395), Expect = 4e-045
Identities = 80/95 (84%), Positives = 81/95 (85%)
Frame = +1 / -1
Query: 841 FPAIHIYLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFH 1020
FP IHIYLA TI+KSE NICD LNL HASNKPNR HLNAVDGEIR V AGLRRVH LFH
Sbjct: 389 FPTIHIYLAGTIMKSELNICDALNLIQHASNKPNRGHLNAVDGEIRFVIAGLRRVHDLFH 210
Query: 1021 GEREQRLRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
GEREQ LRAPTL EAA LRD RGL*GHEAPAAEER
Sbjct: 209 GEREQCLRAPTLGEAAALRDRRGL*GHEAPAAEER 105
Score = 149 bits (320), Expect = 8e-035
Identities = 73/115 (63%), Positives = 77/115 (66%)
Frame = -3 / +1
Query: 1133 TLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPSTAL 954
T TRSSAAGASCPHSPR SRR AAS RVGA WTRR+PA+T LISPSTAL
Sbjct: 97 TPTRSSAAGASCPHSPRRSRRAAASPRVGARRHCSRSP*NRSWTRRRPAMTNLISPSTAL 276
Query: 953 RCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR*M*IAGKXXXXXXXXXXXLITRTM 789
RC RLGLLDAC*+R S SQM SL MMV AR*M*I GK +T TM
Sbjct: 277 RCPRLGLLDAC*IRFSASQMFNSLFMMVPAR*M*IVGKMSLLTLRKWLMSMTGTM 441
Score = 138 bits (297), Expect(2) = 9e-035
Identities = 55/74 (74%), Positives = 62/74 (83%)
Frame = +3 / -3
Query: 786 *HSSRY*HQPSP*HRKPHFPSDSHLSCQYHHQE*IQHL*HAQPYLACVQQA*S*TPQRR* 965
*HS R+*HQP P* +K HFP+DSHLSC+YHH+E*I+HL* A+PY CVQQA* TPQRR
Sbjct: 444 *HSPRH*HQPFP*RQKTHFPNDSHLSCRYHHEE*IEHL*RAEPYSTCVQQA*PWTPQRRR 265
Query: 966 WRN*TCHRWFAPRP 1007
WRN* CHRW APRP
Sbjct: 264 WRN*ICHRWPAPRP 223
Score = 128 bits (275), Expect(2) = 1e-030
Identities = 53/62 (85%), Positives = 56/62 (90%)
Frame = +2 / -2
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTSL VDTSTP MAKLDLS L CAASM+CFTV+GSSVCALRPLERPL SGT VDCEG
Sbjct: 310 NMRPTSLTVDTSTPSMAKLDLSSLACAASMICFTVNGSSVCALRPLERPLLSGTAVDCEG 131
Query: 1100 MK 1105
MK
Sbjct: 130 MK 125
Score = 89.5 bits (189), Expect(2) = 2e-037
Identities = 35/38 (92%), Positives = 35/38 (92%)
Frame = -1 / +2
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERAD AP HRETDHGRGA
Sbjct: 122 GLHALTVHGGPGEQRPLQGSERADTAPVHRETDHGRGA 235
Score = 89.0 bits (188), Expect(2) = 2e-037
Identities = 41/57 (71%), Positives = 44/57 (77%)
Frame = -1 / +2
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQDRCESLGK*GFRC*GDG*C**RELCH 785
*GV+ *ACWTH *G A HRC IHS *WY QDRCESLGK* F *G+G*C *R LC+
Sbjct: 275 *GVHG*ACWTHVE*GSARHRCSIHSS*WYRQDRCESLGK*VF*R*GNG*CQ*RGLCY 445
Score = 30.4 bits (60), Expect(2) = 9e-035
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -3
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 162 CSPGPPWTV 136
Score = 26.3 bits (51), Expect(2) = 1e-030
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / -2
Query: 845 QRFTSILPVP 874
QRFTSILPVP
Sbjct: 385 QRFTSILPVP 356
>gb|AW565713.1|AW565713 LG1_348_C04.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 644
Score = 149 bits (321), Expect(4) = 5e-042
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2 / +1
Query: 576 GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 397
GN +S+LV+SVF+DP+ +D+EHGLHIKDV +RLKL +DVV A IQ HVD G+IYNTIDD
Sbjct: 112 GNNVSDLVMSVFNDPAAIDREHGLHIKDVANRLKLSEDVVRAVIQHHVDQGDIYNTIDDN 291
Query: 396 HYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 292 HFKSAANG*SCCKSSLQALCRYGAVSSKK 378
Score = 137 bits (294), Expect(4) = 1e-038
Identities = 65/90 (72%), Positives = 66/90 (73%)
Frame = +2 / -1
Query: 311 FFLETAPYLHGA*TLDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAALTTSSGSLRRSM 490
F LETAPYLH A* LDLQ HPF DL W SSIVL*M P ST* WM ALTTSS SLRR
Sbjct: 377 FLLETAPYLHRA*RLDLQHDHPFAADLKWLSSIVL*MSPWST*CWMTALTTSSDSLRRFA 198
Query: 491 TSLMCSPCSWSMTDGS*KTLKTKLDM*FPS 580
TSLMCSPCS SM GS KTL TK D FP+
Sbjct: 197 TSLMCSPCSRSMAAGSLKTLMTKSDTLFPA 108
Score = 135 bits (289), Expect(3) = 5e-035
Identities = 64/93 (68%), Positives = 70/93 (75%)
Frame = -3 / +2
Query: 590 QIRLMETTYPTWS*VFFMTHLSWTRSMDCTSKMS*IVSNYQMM*SVRPSKVMLMWATFTT 411
Q L+ETT TWS*VF MT T SMDCTSKMS IV NYQ M*S R S +ML ATFTT
Sbjct: 98 QEMLLETTCLTWS*VFLMTQQP*TGSMDCTSKMSQIVLNYQKM*SGRSSNIMLTRATFTT 277
Query: 410 QLMTSTTNLSGMDDHVASPAFRLRVGMEPFQGR 312
+LMT+ ++L MDDHVASPAFRL VGMEPFQ R
Sbjct: 278 RLMTTISSLPRMDDHVASPAFRLCVGMEPFQAR 376
Score = 105 bits (224), Expect(3) = 7e-026
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = +1 / -3
Query: 313 LP*NGSIPTRSLNAGLATWSSIPDRFXXXXXXXXXXXAHINMTLDGRTDYIIW*FETIYD 492
L *NGSIPT+SL AGLAT SSI R A +NM LD R DYI *F+TI D
Sbjct: 375 LA*NGSIPTQSLKAGLAT*SSIRGRLEMVVINRVVNVALVNMMLDDRPDYIF**FKTICD 196
Query: 493 IFDVQSMLLVHDRWVMKNTQDQVGYVVS 576
IFDVQSML V+ WV+KNT DQV +VVS
Sbjct: 195 IFDVQSMLPVYGCWVIKNTHDQVRHVVS 112
Score = 90.0 bits (190), Expect(4) = 7e-026
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -2
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 376 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 236
Score = 82.6 bits (174), Expect(2) = 3e-024
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = -1 / +3
Query: 577 WKLHIQLGLECFS*PICHGPGAWTAHQRCHRSSQTTR*CSQCGHPRSC*CG 425
WK + LG ECF *P H PGAWTAHQRC +SS T R CSQ GHP SC* G
Sbjct: 111 WKQRV*LGHECF**PSSHRPGAWTAHQRCRKSS*TIRRCSQGGHPTSC*PG 263
Score = 51.5 bits (106), Expect(2) = 3e-024
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1 / +3
Query: 388 ICPEWMTTLQVQRSGSV*VWSRFKEE 311
+C EWM LQVQ SGSV*VWSRFK+E
Sbjct: 300 VCREWMIMLQVQPSGSV*VWSRFKQE 377
Score = 36.8 bits (74), Expect(4) = 7e-026
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -2
Query: 498 *CAVHAPGP*QMGHEKHSRPSWICSFHQ 581
*CAVHAPG +GH KHS PS F Q
Sbjct: 190 *CAVHAPGLWLLGH*KHS*PSQTRCFQQ 107
Score = 31.8 bits (63), Expect(4) = 1e-038
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS +TSYV
Sbjct: 541 N*CPAGRPSPITSYV 497
Score = 29.9 bits (59), Expect(4) = 5e-042
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 374 RNVNPLQDRLY 406
Score = 28.1 bits (55), Expect(3) = 5e-035
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 373 KKCKPSAGSPL 405
Score = 26.3 bits (51), Expect(4) = 5e-042
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +3
Query: 206 T*DVSRLGLPAGHQ 165
T DV LGLPAGHQ
Sbjct: 498 TYDVIGLGLPAGHQ 539
Score = 26.3 bits (51), Expect(4) = 1e-038
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 416 HMEDRGDPAEGLHF 375
Score = 26.3 bits (51), Expect(3) = 7e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 165 LMSCR*T*STHILC 206
LMS R*T*S HI+C
Sbjct: 539 LMSSR*T*SNHIIC 498
Score = 25.4 bits (49), Expect(3) = 7e-026
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 427 TLMTIWKIEAILQRVYIS 374
Score = 25.4 bits (49), Expect(4) = 7e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / -3
Query: 164 TDVLQVDLVYSHLM 205
TDV QVDLV SH M
Sbjct: 540 TDVQQVDLVQSHHM 499
Score = 24.9 bits (48), Expect(3) = 5e-035
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 205 HKM*VD*VYLQDIS 164
H M*+D*VYL DIS
Sbjct: 499 HMM*LD*VYLLDIS 540
Score = 23.5 bits (45), Expect(4) = 5e-042
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 428 VNSLTSRFRCV 460
Score = 22.6 bits (43), Expect(4) = 1e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 463 RYTPKPRS*AVD 428
Score = 22.1 bits (42), Expect(4) = 7e-026
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -3
Query: 283 RRS*RGFTFL 312
RRS RGFTFL
Sbjct: 402 RRSCRGFTFL 373
>gb|BG356721.1|BG356721 OV2_9_B07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 619
Score = 149 bits (321), Expect(4) = 5e-042
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2 / +2
Query: 576 GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 397
GN +S+LV+SVF+DP+ +D+EHGLHIKDV +RLKL +DVV A IQ HVD G+IYNTIDD
Sbjct: 113 GNNVSDLVMSVFNDPAAIDREHGLHIKDVANRLKLSEDVVRAVIQHHVDQGDIYNTIDDN 292
Query: 396 HYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 293 HFKSAANG*SCCKSSLQALCRYGAVSSKK 379
Score = 137 bits (294), Expect(4) = 1e-038
Identities = 65/90 (72%), Positives = 66/90 (73%)
Frame = +2 / -2
Query: 311 FFLETAPYLHGA*TLDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAALTTSSGSLRRSM 490
F LETAPYLH A* LDLQ HPF DL W SSIVL*M P ST* WM ALTTSS SLRR
Sbjct: 378 FLLETAPYLHRA*RLDLQHDHPFAADLKWLSSIVL*MSPWST*CWMTALTTSSDSLRRFA 199
Query: 491 TSLMCSPCSWSMTDGS*KTLKTKLDM*FPS 580
TSLMCSPCS SM GS KTL TK D FP+
Sbjct: 198 TSLMCSPCSRSMAAGSLKTLMTKSDTLFPA 109
Score = 135 bits (289), Expect(3) = 5e-035
Identities = 64/93 (68%), Positives = 70/93 (75%)
Frame = -3 / +3
Query: 590 QIRLMETTYPTWS*VFFMTHLSWTRSMDCTSKMS*IVSNYQMM*SVRPSKVMLMWATFTT 411
Q L+ETT TWS*VF MT T SMDCTSKMS IV NYQ M*S R S +ML ATFTT
Sbjct: 99 QEMLLETTCLTWS*VFLMTQQP*TGSMDCTSKMSQIVLNYQKM*SGRSSNIMLTRATFTT 278
Query: 410 QLMTSTTNLSGMDDHVASPAFRLRVGMEPFQGR 312
+LMT+ ++L MDDHVASPAFRL VGMEPFQ R
Sbjct: 279 RLMTTISSLPRMDDHVASPAFRLCVGMEPFQAR 377
Score = 105 bits (224), Expect(3) = 7e-026
Identities = 53/88 (60%), Positives = 59/88 (67%)
Frame = +1 / -1
Query: 313 LP*NGSIPTRSLNAGLATWSSIPDRFXXXXXXXXXXXAHINMTLDGRTDYIIW*FETIYD 492
L *NGSIPT+SL AGLAT SSI R A +NM LD R DYI *F+TI D
Sbjct: 376 LA*NGSIPTQSLKAGLAT*SSIRGRLEMVVINRVVNVALVNMMLDDRPDYIF**FKTICD 197
Query: 493 IFDVQSMLLVHDRWVMKNTQDQVGYVVS 576
IFDVQSML V+ WV+KNT DQV +VVS
Sbjct: 196 IFDVQSMLPVYGCWVIKNTHDQVRHVVS 113
Score = 90.0 bits (190), Expect(4) = 7e-026
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -3
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 377 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 237
Score = 82.6 bits (174), Expect(2) = 3e-024
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = -1 / +1
Query: 577 WKLHIQLGLECFS*PICHGPGAWTAHQRCHRSSQTTR*CSQCGHPRSC*CG 425
WK + LG ECF *P H PGAWTAHQRC +SS T R CSQ GHP SC* G
Sbjct: 112 WKQRV*LGHECF**PSSHRPGAWTAHQRCRKSS*TIRRCSQGGHPTSC*PG 264
Score = 51.5 bits (106), Expect(2) = 3e-024
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = -1 / +1
Query: 388 ICPEWMTTLQVQRSGSV*VWSRFKEE 311
+C EWM LQVQ SGSV*VWSRFK+E
Sbjct: 301 VCREWMIMLQVQPSGSV*VWSRFKQE 378
Score = 36.8 bits (74), Expect(4) = 7e-026
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +3 / -3
Query: 498 *CAVHAPGP*QMGHEKHSRPSWICSFHQ 581
*CAVHAPG +GH KHS PS F Q
Sbjct: 191 *CAVHAPGLWLLGH*KHS*PSQTRCFQQ 108
Score = 31.8 bits (63), Expect(4) = 1e-038
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS +TSYV
Sbjct: 542 N*CPAGRPSPITSYV 498
Score = 29.9 bits (59), Expect(4) = 5e-042
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +3
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 375 RNVNPLQDRLY 407
Score = 28.1 bits (55), Expect(3) = 5e-035
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +2
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 374 KKCKPSAGSPL 406
Score = 26.3 bits (51), Expect(4) = 5e-042
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 206 T*DVSRLGLPAGHQ 165
T DV LGLPAGHQ
Sbjct: 499 TYDVIGLGLPAGHQ 540
Score = 26.3 bits (51), Expect(4) = 1e-038
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 417 HMEDRGDPAEGLHF 376
Score = 26.3 bits (51), Expect(3) = 7e-026
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 165 LMSCR*T*STHILC 206
LMS R*T*S HI+C
Sbjct: 540 LMSSR*T*SNHIIC 499
Score = 25.4 bits (49), Expect(3) = 7e-026
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 428 TLMTIWKIEAILQRVYIS 375
Score = 25.4 bits (49), Expect(4) = 7e-026
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +2 / -1
Query: 164 TDVLQVDLVYSHLM 205
TDV QVDLV SH M
Sbjct: 541 TDVQQVDLVQSHHM 500
Score = 24.9 bits (48), Expect(3) = 5e-035
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +2
Query: 205 HKM*VD*VYLQDIS 164
H M*+D*VYL DIS
Sbjct: 500 HMM*LD*VYLLDIS 541
Score = 23.5 bits (45), Expect(4) = 5e-042
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 429 VNSLTSRFRCV 461
Score = 22.6 bits (43), Expect(4) = 1e-038
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 464 RYTPKPRS*AVD 429
Score = 22.1 bits (42), Expect(4) = 7e-026
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 283 RRS*RGFTFL 312
RRS RGFTFL
Sbjct: 403 RRSCRGFTFL 374
>gb|CD221869.1|CD221869 CCC1_71_C03.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_71_C03_A007 5', mRNA sequence
Length = 440
Score = 165 bits (354), Expect(2) = 5e-041
Identities = 73/89 (82%), Positives = 75/89 (84%)
Frame = +1 / -2
Query: 859 YLASTIIKSEYNICDTLNLT*HASNKPNRRHLNAVDGEIRPVTAGLRRVHGLFHGEREQR 1038
YLA TI+KSE NICD +NL HASNK NR HLNAVDGEIR V AGLRRVH LFHGEREQR
Sbjct: 439 YLAGTIMKSELNICDPVNLIQHASNKHNRGHLNAVDGEIRFVIAGLRRVHDLFHGEREQR 260
Query: 1039 LRAPTLREAAVLRDHRGL*GHEAPAAEER 1125
LRAPTL AA LRD RGL*GHEAPAAEER
Sbjct: 259 LRAPTLGGAAALRDRRGL*GHEAPAAEER 173
Score = 149 bits (319), Expect(2) = 3e-036
Identities = 66/80 (82%), Positives = 70/80 (87%)
Frame = -2 / +2
Query: 1098 PSQSTVVPENSGLSKGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRLVGRML 919
PSQST VPE+SG SKGRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+ LVGRML
Sbjct: 200 PSQSTAVPESSGPSKGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVMLVGRML 379
Query: 918 GKVERVTDVVFTLDDGTGKI 859
KV RVTDV FTL DGTGKI
Sbjct: 380 NKVHRVTDVQFTLHDGTGKI 439
Score = 131 bits (280), Expect(2) = 3e-030
Identities = 63/94 (67%), Positives = 67/94 (71%)
Frame = -3 / +3
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLRVGAXXXXXXXXXXXPWTRRKPAVTGLISPST 960
P T TRSSAAGASCPHSPR SRR AA RVGA WTRR+PA+T LISPST
Sbjct: 159 PPTPTRSSAAGASCPHSPRRSRRAAAPPRVGARRRCSRSP*NRSWTRRRPAMTNLISPST 338
Query: 959 ALRCLRLGLLDAC*VRLSVSQMLYSLLMMVLAR* 858
ALRC RL LLDAC*+R + SQM SL MMV AR*
Sbjct: 339 ALRCPRLCLLDAC*IRFTGSQMFNSLFMMVPAR* 440
Score = 126 bits (269), Expect = 9e-028
Identities = 52/62 (83%), Positives = 55/62 (88%)
Frame = +2 / -3
Query: 920 SMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRPLERPLFSGTTVDCEG 1099
+MRPTS+ VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRPLE PL SGT VDCEG
Sbjct: 378 NMRPTSITVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRPLEGPLLSGTAVDCEG 199
Query: 1100 MK 1105
MK
Sbjct: 198 MK 193
Score = 94.5 bits (200), Expect(2) = 1e-021
Identities = 37/50 (74%), Positives = 41/50 (82%)
Frame = +3 / -1
Query: 858 LSCQYHHQE*IQHL*HAQPYLACVQQA*S*TPQRR*WRN*TCHRWFAPRP 1007
LSC+YHH+E*I+HL* +PY CVQQA* TPQRR WRN* CHRW APRP
Sbjct: 440 LSCRYHHEE*IEHL*PGEPYSTCVQQA*PWTPQRRRWRN*ICHRWPAPRP 291
Score = 93.2 bits (197), Expect(2) = 4e-027
Identities = 37/38 (97%), Positives = 37/38 (97%)
Frame = -1 / +1
Query: 1108 GLHALTVHGGPGEQRPL*GSERADAAPAHRETDHGRGA 995
GLHALTVHGGPGEQRPL GSERADAAPAHRETDHGRGA
Sbjct: 190 GLHALTVHGGPGEQRPLQGSERADAAPAHRETDHGRGA 303
Score = 50.6 bits (104), Expect(2) = 4e-027
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -1 / +1
Query: 955 *GVYD*ACWTHAR*G*ACHRCCIHS**WYWQD 860
*GV+ ACWTH *G HRC IHS *WY QD
Sbjct: 343 *GVHGYACWTHVE*GSPGHRCSIHSS*WYRQD 438
Score = 30.4 bits (60), Expect(2) = 1e-021
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = +3 / -1
Query: 1068 CSPGPPWTV 1094
CSPGPPWTV
Sbjct: 230 CSPGPPWTV 204
Score = 25.4 bits (49), Expect(2) = 5e-041
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 94 PKP*ASRGRK 65
Score = 25.4 bits (49), Expect(2) = 3e-036
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +3
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 66 FLPREA*GLGLQ 101
Score = 23.1 bits (44), Expect(2) = 3e-030
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -2 / +1
Query: 1236 PSFLGKPR 1213
PSFLGKPR
Sbjct: 64 PSFLGKPR 87
>gb|BG051259.1|BG051259 FM1_54_C02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 597
Score = 122 bits (260), Expect(6) = 2e-040
Identities = 52/77 (67%), Positives = 62/77 (80%)
Frame = -2 / +3
Query: 576 GNYISNLVLSVFHDPSVMDQEHGLHIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDF 397
GN IS LV+SVF+DP+ +D+EHGLHIKDV +RLKL +DVV A IQ HVD G+IYNTIDD
Sbjct: 138 GNNISELVMSVFNDPAAIDREHGLHIKDVANRLKLSEDVVRAVIQHHVDQGDIYNTIDDN 317
Query: 396 HYKSVRNG*PRCKSSVQ 346
H+KS NG* KSS+Q
Sbjct: 318 HFKSAANG*SCRKSSLQ 368
Score = 119 bits (255), Expect(5) = 6e-035
Identities = 54/79 (68%), Positives = 61/79 (77%)
Frame = -3 / +1
Query: 581 LMETTYPTWS*VFFMTHLSWTRSMDCTSKMS*IVSNYQMM*SVRPSKVMLMWATFTTQLM 402
L+ETTYP WS*VF MT T SMDCTSKMS IV NYQ M*S R S +ML ATFTT+LM
Sbjct: 133 LLETTYPNWS*VFLMTQQP*TGSMDCTSKMSQIVLNYQKM*SGRSSNIMLTRATFTTRLM 312
Query: 401 TSTTNLSGMDDHVASPAFR 345
T+ ++L MDDHVASPAF+
Sbjct: 313 TTISSLPRMDDHVASPAFK 369
Score = 112 bits (239), Expect(5) = 2e-035
Identities = 53/76 (69%), Positives = 55/76 (72%)
Frame = +2 / -3
Query: 353 LDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAALTTSSGSLRRSMTSLMCSPCSWSMTD 532
LDL+ HPF DL W SSIVL*M P ST* WM ALTTSS SLRR TSLMCSPCS SM
Sbjct: 361 LDLRHDHPFAADLKWLSSIVL*MSPWST*CWMTALTTSSDSLRRFATSLMCSPCSRSMAA 182
Query: 533 GS*KTLKTKLDM*FPS 580
GS KTL T DM FP+
Sbjct: 181 GSLKTLMTNSDMLFPA 134
Score = 93.2 bits (197), Expect(5) = 3e-027
Identities = 46/79 (58%), Positives = 51/79 (64%)
Frame = +1 / -2
Query: 340 RSLNAGLATWSSIPDRFXXXXXXXXXXXAHINMTLDGRTDYIIW*FETIYDIFDVQSMLL 519
R+L AGLAT SSI R A +NM LD R DYI *F+TI DIFDVQSML
Sbjct: 374 RALKAGLAT*SSIRGRLEMVVINRVVNVALVNMMLDDRPDYIF**FKTICDIFDVQSMLP 195
Query: 520 VHDRWVMKNTQDQVGYVVS 576
V+ WV+KNT DQ GYVVS
Sbjct: 194 VYGCWVIKNTHDQFGYVVS 138
Score = 61.1 bits (127), Expect(5) = 3e-021
Identities = 21/35 (60%), Positives = 26/35 (74%)
Frame = +3 / -1
Query: 348 ERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
E WTC+++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 366 EGWTCDMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 262
Score = 41.4 bits (84), Expect(5) = 3e-021
Identities = 18/28 (64%), Positives = 19/28 (67%)
Frame = +3 / -1
Query: 498 *CAVHAPGP*QMGHEKHSRPSWICSFHQ 581
*CAVHAPG +GH KHS P IC F Q
Sbjct: 216 *CAVHAPGLWLLGH*KHS*PIRICCFQQ 133
Score = 32.7 bits (65), Expect(5) = 2e-035
Identities = 13/15 (86%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS LTSYV
Sbjct: 568 N*CPAGRPSPLTSYV 524
Score = 29.9 bits (59), Expect(6) = 2e-040
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 401 RNVNPLQDRLY 433
Score = 29.9 bits (59), Expect(5) = 2e-035
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 312 SSLKRLHTYTEPER 353
S LKRLHTYTEP R
Sbjct: 403 SCLKRLHTYTEP*R 362
Score = 29.0 bits (57), Expect(6) = 2e-040
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -3 / +3
Query: 206 T*DVSRLGLPAGHQ 165
T DVS LGLPAGHQ
Sbjct: 525 TYDVSGLGLPAGHQ 566
Score = 29.0 bits (57), Expect(6) = 2e-040
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / +3
Query: 346 GSV*VWSRFKEE 311
GSV*VWSRFK+E
Sbjct: 369 GSV*VWSRFKQE 404
Score = 28.6 bits (56), Expect(5) = 3e-027
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3 / -2
Query: 165 LMSCR*T*STHILC 206
LMS R*T*STHI+C
Sbjct: 566 LMSSR*T*STHIIC 525
Score = 28.1 bits (55), Expect(5) = 6e-035
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 400 KKCKPSAGSPL 432
Score = 26.7 bits (52), Expect(5) = 3e-027
Identities = 10/12 (83%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 311 FFLETAPYLHGA 346
F LETAPYLH A
Sbjct: 404 FLLETAPYLHRA 369
Score = 26.7 bits (52), Expect(5) = 3e-021
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 164 TDVLQVDLVYSHLM 205
TDV QVDLV+SH M
Sbjct: 567 TDVQQVDLVHSHHM 526
Score = 26.3 bits (51), Expect(5) = 6e-035
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 205 HKM*VD*VYLQDIS 164
H M*VD*VYL DIS
Sbjct: 526 HMM*VD*VYLLDIS 567
Score = 26.3 bits (51), Expect(5) = 2e-035
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 443 HMEDRGDPAEGLHF 402
Score = 25.8 bits (50), Expect(5) = 6e-035
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / +1
Query: 348 QAPCRYGAVSRKK 310
+A CRYGAVS KK
Sbjct: 367 KALCRYGAVSSKK 405
Score = 25.4 bits (49), Expect(5) = 3e-027
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -3
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 454 TLMTIWKIEAILQRVYIS 401
Score = 24.9 bits (48), Expect(6) = 2e-040
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = -3 / +1
Query: 683 TAFRCIWSSQG 651
TAFRCIW + G
Sbjct: 1 TAFRCIWITPG 33
Score = 23.5 bits (45), Expect(6) = 2e-040
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 455 VNSLTSRFRCV 487
Score = 23.5 bits (45), Expect(5) = 3e-021
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -1
Query: 313 LP*NGSIPTRSL 348
L *NGSIPT+SL
Sbjct: 402 LA*NGSIPTQSL 367
Score = 22.6 bits (43), Expect(5) = 6e-035
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 258 STA*HIGLGVYCS 220
STA* +GLGVY S
Sbjct: 456 STA*LLGLGVYLS 494
Score = 22.6 bits (43), Expect(5) = 2e-035
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 490 RYTPKPRS*AVD 455
Score = 22.1 bits (42), Expect(5) = 3e-021
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / -1
Query: 283 RRS*RGFTFL 312
RRS RGFTFL
Sbjct: 429 RRSCRGFTFL 400
Score = 22.1 bits (42), Expect(5) = 3e-027
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3 / -1
Query: 204 CIITYESNTHLNRYAKLLT 260
CI +THLN KLLT
Sbjct: 510 CIREQYLDTHLNLEVKLLT 454
>gb|CD219734.1|CD219734 CCC1_58_H08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_58_H08_A007 5', mRNA sequence
Length = 645
Score = 150 bits (322), Expect(2) = 1e-038
Identities = 58/109 (53%), Positives = 80/109 (73%)
Frame = -2 / +2
Query: 972 FAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNEN 793
F ++GVE++ IRLVG + GKVER TDV FTLDDGTG++D RW N+ASD+ E A N
Sbjct: 206 FVVDGVEMANIRLVGMVNGKVERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQNGM 385
Query: 792 YVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLK 646
YV VIG LKG Q ++ A+++R +T+FNE+T HF+ C+++H+E LK
Sbjct: 386 YVAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTKLK 532
Score = 31.8 bits (63), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2 / +2
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQT 991
SK R A + +PLTVKQ +DA Q+
Sbjct: 113 SKMRGASSTMPLTVKQVVDAQQS 181
>gb|BG412034.1|BG412034 OV2_37_B11.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 557
Score = 150 bits (322), Expect(2) = 1e-038
Identities = 58/109 (53%), Positives = 80/109 (73%)
Frame = -2 / +1
Query: 972 FAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNEN 793
F ++GVE++ IRLVG + GKVER TDV FTLDDGTG++D RW N+ASD+ E A N
Sbjct: 208 FVVDGVEMANIRLVGMVNGKVERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQNGM 387
Query: 792 YVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFLHCIQVHMELPGLK 646
YV VIG LKG Q ++ A+++R +T+FNE+T HF+ C+++H+E LK
Sbjct: 388 YVAVIGSLKGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTKLK 534
Score = 31.8 bits (63), Expect(2) = 1e-038
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2 / +1
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQT 991
SK R A + +PLTVKQ +DA Q+
Sbjct: 115 SKMRGASSTMPLTVKQVVDAQQS 183
>gb|CF427286.1|CF427286 PH1_4_E06.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_4_E06_A002 5', mRNA sequence
Length = 532
Score = 126 bits (269), Expect(2) = 2e-031
Identities = 50/96 (52%), Positives = 69/96 (71%)
Frame = -2 / +3
Query: 972 FAINGVEVSTIRLVGRMLGKVERVTDVVFTLDDGTGKIDVNRWENEASDAKEMADANNEN 793
F ++GVE++ IRLVG + GKVER TDV FTLDD +G++D RW N+ASD+ E A N
Sbjct: 243 FVVDGVEMANIRLVGMVNGKVERTTDVTFTLDDCSGRLDFIRWVNDASDSSETAAVQNGM 422
Query: 792 YVIVIGGLKGFQGKRHVVAYAVRRVTNFNEITCHFL 685
YV VIG L G Q ++ A+++R +T+FNE+T HF+
Sbjct: 423 YVAVIGSL*GLQERKRATAFSIRPITDFNEVTLHFI 530
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -2 / +3
Query: 1059 SKGRSAQTLLPLTVKQTMDAAQT 991
SK R A + +PLTVKQ +DA Q+
Sbjct: 150 SKMRGASSTMPLTVKQVVDAQQS 218
>gb|CD221848.1|CD221848 CCC1_71_C03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_71_C03_A007 3', mRNA sequence
Length = 404
Score = 109 bits (233), Expect(4) = 3e-030
Identities = 47/65 (72%), Positives = 52/65 (80%)
Frame = -2 / +1
Query: 504 HIKDVIDRLKLPDDVVSAAIQGHVDVGNIYNTIDDFHYKSVRNG*PRCKSSVQAPCRYGA 325
HIKDV +RLKL +DVV A IQ HVD G+IYNTIDD H+KS NG* CKSS+QA CRYGA
Sbjct: 1 HIKDVANRLKLSEDVVRAVIQHHVDQGDIYNTIDDNHFKSAANG*SCCKSSLQALCRYGA 180
Query: 324 VSRKK 310
VS KK
Sbjct: 181 VSSKK 195
Score = 101 bits (215), Expect(4) = 4e-028
Identities = 48/64 (75%), Positives = 48/64 (75%)
Frame = +2 / -1
Query: 311 FFLETAPYLHGA*TLDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAALTTSSGSLRRSM 490
F LETAPYLH A* LDLQ HPF DL W SSIVL*M P ST* WM ALTTSS SLRR
Sbjct: 194 FLLETAPYLHRA*RLDLQHDHPFAADLKWLSSIVL*MSPWST*CWMTALTTSSDSLRRFA 15
Query: 491 TSLM 502
TSLM
Sbjct: 14 TSLM 3
Score = 99.6 bits (211), Expect(3) = 2e-024
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = -3 / +2
Query: 503 TSKMS*IVSNYQMM*SVRPSKVMLMWATFTTQLMTSTTNLSGMDDHVASPAFRLRVGMEP 324
TSKMS IV NYQ M*S R S +ML ATFTT+LMT+ ++L MDDHVASPAFRL VGMEP
Sbjct: 2 TSKMSQIVLNYQKM*SGRSSNIMLTRATFTTRLMTTISSLPRMDDHVASPAFRLCVGMEP 181
Query: 323 FQGR 312
FQ R
Sbjct: 182 FQAR 193
Score = 90.0 bits (190), Expect(3) = 3e-021
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -2
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 193 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 53
Score = 31.8 bits (63), Expect(4) = 4e-028
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS +TSYV
Sbjct: 358 N*CPAGRPSPITSYV 314
Score = 29.9 bits (59), Expect(4) = 3e-030
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +2
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 191 RNVNPLQDRLY 223
Score = 28.1 bits (55), Expect(3) = 2e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / +1
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 190 KKCKPSAGSPL 222
Score = 26.3 bits (51), Expect(4) = 3e-030
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +3
Query: 206 T*DVSRLGLPAGHQ 165
T DV LGLPAGHQ
Sbjct: 315 TYDVIGLGLPAGHQ 356
Score = 26.3 bits (51), Expect(4) = 4e-028
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 233 HMEDRGDPAEGLHF 192
Score = 26.3 bits (51), Expect(3) = 3e-021
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 165 LMSCR*T*STHILC 206
LMS R*T*S HI+C
Sbjct: 356 LMSSR*T*SNHIIC 315
Score = 25.4 bits (49), Expect(3) = 3e-021
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / -2
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 244 TLMTIWKIEAILQRVYIS 191
Score = 24.9 bits (48), Expect(3) = 2e-024
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -1 / +1
Query: 205 HKM*VD*VYLQDIS 164
H M*+D*VYL DIS
Sbjct: 316 HMM*LD*VYLLDIS 357
Score = 23.5 bits (45), Expect(4) = 3e-030
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 245 VNSLTSRFRCV 277
Score = 22.6 bits (43), Expect(4) = 4e-028
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 280 RYTPKPRS*AVD 245
>gb|CW483873.1|CW483873 fsbb001f245l15k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f245l15, DNA
sequence
Length = 786
Score = 90.0 bits (190), Expect(4) = 2e-026
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / +3
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 111 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 251
Score = 82.6 bits (174), Expect(4) = 4e-026
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = -2 / -1
Query: 453 AAIQGHVDVGNIYNTIDDFHYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
A IQ HVD G+IYNTIDD H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 252 AVIQHHVDQGDIYNTIDDNHFKSAANG*SCCKSSLQALCRYGAVSSKK 109
Score = 78.5 bits (165), Expect(4) = 5e-022
Identities = 36/49 (73%), Positives = 36/49 (73%)
Frame = +2 / +2
Query: 311 FFLETAPYLHGA*TLDLQRGHPFRTDL*WKSSIVL*MLPTST*PWMAAL 457
F LETAPYLH A* LDLQ HPF DL W SSIVL*M P ST* WM AL
Sbjct: 110 FLLETAPYLHRA*RLDLQHDHPFAADLKWLSSIVL*MSPWST*CWMTAL 256
Score = 77.1 bits (162), Expect(3) = 2e-022
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = -3 / -2
Query: 452 RPSKVMLMWATFTTQLMTSTTNLSGMDDHVASPAFRLRVGMEPFQGR 312
R S +ML ATFTT+LMT+ ++L MDDHVASPAFRL VGMEPFQ R
Sbjct: 251 RSSNIMLTRATFTTRLMTTISSLPRMDDHVASPAFRLCVGMEPFQAR 111
Score = 45.5 bits (93), Expect(4) = 4e-026
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = -1 / -2
Query: 520 PGAWTAHQRCHRSSQTTR*CSQ 455
PGAWTAHQRC +SS T R CSQ
Sbjct: 680 PGAWTAHQRCRKSS*TIRRCSQ 615
Score = 45.1 bits (92), Expect(3) = 2e-022
Identities = 18/27 (66%), Positives = 22/27 (81%)
Frame = -2 / -3
Query: 537 DPSVMDQEHGLHIKDVIDRLKLPDDVV 457
D + D+EHGLHIKDV +RLKL +DVV
Sbjct: 697 DCNCRDREHGLHIKDVANRLKLSEDVV 617
Score = 44.1 bits (90), Expect(4) = 2e-026
Identities = 19/24 (79%), Positives = 20/24 (83%)
Frame = +2 / +3
Query: 455 LTTSSGSLRRSMTSLMCSPCSWSM 526
LTTSS SLRR TSLMCSPCS S+
Sbjct: 615 LTTSSDSLRRFATSLMCSPCSRSL 686
Score = 36.3 bits (73), Expect(4) = 5e-022
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1 / +2
Query: 457 DYIIW*FETIYDIFDVQSMLLV 522
DYI *F+TI DIFDVQSML V
Sbjct: 617 DYIF**FKTICDIFDVQSMLPV 682
Score = 29.9 bits (59), Expect(4) = 4e-026
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 113 RNVNPLQDRLY 81
Score = 28.1 bits (55), Expect(3) = 2e-022
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 312 KKCKPSSGSPI 280
KKCKPS+GSP+
Sbjct: 114 KKCKPSAGSPL 82
Score = 27.2 bits (53), Expect(4) = 5e-022
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3 / +1
Query: 498 *CAVHAPGP*QMGHEKHSRPSWICSF 575
*CAVHAPG H+ S+ + +F
Sbjct: 658 *CAVHAPGLCSCSHQSISQQDMLLTF 735
Score = 26.3 bits (51), Expect(4) = 2e-026
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / +2
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 71 HMEDRGDPAEGLHF 112
Score = 25.4 bits (49), Expect(4) = 5e-022
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +3 / +3
Query: 258 TMKPICKI*AILKRVYIS 311
T+ I KI AIL+RVYIS
Sbjct: 60 TLMTIWKIEAILQRVYIS 113
Score = 23.5 bits (45), Expect(4) = 4e-026
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 59 VNSLTSRFRCV 27
Score = 22.6 bits (43), Expect(4) = 2e-026
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / +3
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 24 RYTPKPRS*AVD 59
>gb|CW334247.1|CW334247 104_832_11482399_116_36051_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11482399, DNA
sequence
Length = 597
Score = 83.1 bits (175), Expect(3) = 9e-026
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +1 / -2
Query: 937 PNRRHLNAVDGEIRPVTAGLRRVHGLFHGEREQRLRAPTLREAAVLRD 1080
P R HLNAVDGEIR V AGLRRVH LFHGEREQRLRAPTL V R+
Sbjct: 416 PYRGHLNAVDGEIRFVIAGLRRVHDLFHGEREQRLRAPTLPTTPVDRE 273
Score = 81.7 bits (172), Expect(2) = 5e-021
Identities = 35/46 (76%), Positives = 36/46 (78%)
Frame = +2 / -3
Query: 917 PSMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRP 1054
P R VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRP
Sbjct: 436 PGKRAKIRTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRP 299
Score = 78.5 bits (165), Expect(3) = 4e-026
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = -2 / +3
Query: 1056 KGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRL 934
+GRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+R+
Sbjct: 297 QGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRI 419
Score = 54.2 bits (112), Expect(3) = 4e-026
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = -3 / +1
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLR 1053
P T TRSSAAGASCPHSPR SRR AAS R
Sbjct: 106 PPTPTRSSAAGASCPHSPRRSRRAAASPR 192
Score = 48.3 bits (99), Expect(3) = 9e-026
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / -2
Query: 1054 LREAAVLRDHRGL*GHEAPAAEER 1125
L EAA LRD RGL*GHEAPAAEER
Sbjct: 191 LGEAAALRDRRGL*GHEAPAAEER 120
Score = 41.4 bits (84), Expect(2) = 5e-021
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / -3
Query: 1049 RPLERPLFSGTTVDCEGMK 1105
R LERPL SGT VDCEGMK
Sbjct: 196 RTLERPLLSGTAVDCEGMK 140
Score = 25.4 bits (49), Expect(3) = 9e-026
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 41 PKP*ASRGRK 12
Score = 25.4 bits (49), Expect(3) = 4e-026
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +1
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 13 FLPREA*GLGLQ 48
>gb|CW488376.1|CW488376 fsbb001f254m01f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f254m01, DNA
sequence
Length = 663
Score = 80.8 bits (170), Expect(3) = 4e-025
Identities = 36/48 (75%), Positives = 37/48 (77%)
Frame = +1 / -1
Query: 937 PNRRHLNAVDGEIRPVTAGLRRVHGLFHGEREQRLRAPTLREAAVLRD 1080
P R HLNAVDGEIR V AGLRRVH LFHGEREQRLRAPT V R+
Sbjct: 648 PYRGHLNAVDGEIRFVIAGLRRVHDLFHGEREQRLRAPTXPTTPVDRE 505
Score = 78.0 bits (164), Expect(3) = 5e-026
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = -2 / +1
Query: 1053 GRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRL 934
GRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+R+
Sbjct: 532 GRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRI 651
Score = 54.2 bits (112), Expect(3) = 5e-026
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = -3 / +2
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLR 1053
P T TRSSAAGASCPHSPR SRR AAS R
Sbjct: 338 PPTPTRSSAAGASCPHSPRRSRRAAASPR 424
Score = 48.3 bits (99), Expect(3) = 4e-025
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / -1
Query: 1054 LREAAVLRDHRGL*GHEAPAAEER 1125
L EAA LRD RGL*GHEAPAAEER
Sbjct: 423 LGEAAALRDRRGL*GHEAPAAEER 352
Score = 25.4 bits (49), Expect(3) = 4e-025
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -1
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 273 PKP*ASRGRK 244
Score = 25.4 bits (49), Expect(3) = 5e-026
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / +2
Query: 1234 FLPREA*GLGFK 1199
FLPREA*GLG +
Sbjct: 245 FLPREA*GLGLQ 280
>gb|CW422138.1|CW422138 fsbb001f131e11f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f131e11, DNA
sequence
Length = 707
Score = 90.0 bits (190), Expect(4) = 8e-025
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -3
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 330 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 190
Score = 82.6 bits (174), Expect(5) = 2e-022
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = -2 / +3
Query: 453 AAIQGHVDVGNIYNTIDDFHYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
A IQ HVD G+IYNTIDD H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 189 AVIQHHVDQGDIYNTIDDNHFKSAANG*SCCKSSLQALCRYGAVSSKK 332
Score = 31.8 bits (63), Expect(4) = 8e-025
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -3
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS +TSYV
Sbjct: 495 N*CPAGRPSPITSYV 451
Score = 29.9 bits (59), Expect(5) = 2e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 328 RNVNPLQDRLY 360
Score = 26.3 bits (51), Expect(5) = 2e-022
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +2
Query: 206 T*DVSRLGLPAGHQ 165
T DV LGLPAGHQ
Sbjct: 452 TYDVIGLGLPAGHQ 493
Score = 26.3 bits (51), Expect(4) = 8e-025
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -2
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 370 HMEDRGDPAEGLHF 329
Score = 23.5 bits (45), Expect(5) = 2e-022
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +1
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 382 VNSLTSRFRCV 414
Score = 23.1 bits (44), Expect(5) = 2e-022
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -1 / +3
Query: 124 KTYITVKHANQE*NRQK 74
KTYITVK+ + N++K
Sbjct: 633 KTYITVKYPSHGLNQKK 683
Score = 22.6 bits (43), Expect(4) = 8e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -3
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 417 RYTPKPRS*AVD 382
>gb|CW270921.1|CW270921 104_742_11402710_116_35331_081 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11402710, DNA
sequence
Length = 654
Score = 90.0 bits (190), Expect(4) = 8e-025
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = +3 / -2
Query: 312 SSLKRLHTYTEPERWTCNVVIHSGQICSGSHQLCCKCCPHQHDLGWP 452
S LKRLHTYTEPE WTCN++IHS Q +G HQ CCKC P QHD+G P
Sbjct: 371 SCLKRLHTYTEPEGWTCNMIIHSRQT*NGCHQSCCKCRPGQHDVG*P 231
Score = 82.6 bits (174), Expect(4) = 2e-022
Identities = 35/48 (72%), Positives = 38/48 (79%)
Frame = -2 / +2
Query: 453 AAIQGHVDVGNIYNTIDDFHYKSVRNG*PRCKSSVQAPCRYGAVSRKK 310
A IQ HVD G+IYNTIDD H+KS NG* CKSS+QA CRYGAVS KK
Sbjct: 230 AVIQHHVDQGDIYNTIDDNHFKSAANG*SCCKSSLQALCRYGAVSSKK 373
Score = 31.8 bits (63), Expect(4) = 8e-025
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1 / -2
Query: 163 D*CPAGRPSLLTSYV 207
+*CPAGRPS +TSYV
Sbjct: 536 N*CPAGRPSPITSYV 492
Score = 29.9 bits (59), Expect(4) = 2e-022
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = -3 / +3
Query: 311 RNVNPLQDRLY 279
RNVNPLQDRLY
Sbjct: 369 RNVNPLQDRLY 401
Score = 26.3 bits (51), Expect(4) = 2e-022
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = -3 / +1
Query: 206 T*DVSRLGLPAGHQ 165
T DV LGLPAGHQ
Sbjct: 493 TYDVIGLGLPAGHQ 534
Score = 26.3 bits (51), Expect(4) = 8e-025
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2 / -1
Query: 269 YLQNIGDPEEGLHF 310
++++ GDP EGLHF
Sbjct: 411 HMEDRGDPAEGLHF 370
Score = 23.5 bits (45), Expect(4) = 2e-022
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +3
Query: 259 VNSLAYRFRCV 227
VNSL RFRCV
Sbjct: 423 VNSLTSRFRCV 455
Score = 22.6 bits (43), Expect(4) = 8e-025
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +2 / -2
Query: 224 QYTPKPIC*AVD 259
+YTPKP *AVD
Sbjct: 458 RYTPKPRS*AVD 423
>gb|CW059223.1|CW059223 104_302_10519191_114_30162 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10519191, DNA
sequence
Length = 550
Score = 83.1 bits (175), Expect(2) = 2e-023
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +1 / +1
Query: 937 PNRRHLNAVDGEIRPVTAGLRRVHGLFHGEREQRLRAPTLREAAVLRD 1080
P R HLNAVDGEIR V AGLRRVH LFHGEREQRLRAPTL V R+
Sbjct: 154 PYRGHLNAVDGEIRFVIAGLRRVHDLFHGEREQRLRAPTLPTTPVDRE 297
Score = 81.7 bits (172), Expect(2) = 5e-021
Identities = 35/46 (76%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 917 PSMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRP 1054
P R VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRP
Sbjct: 134 PGKRAKIRTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRP 271
Score = 78.5 bits (165), Expect(2) = 7e-024
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = -2 / -2
Query: 1056 KGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRL 934
+GRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+R+
Sbjct: 273 QGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRI 151
Score = 54.2 bits (112), Expect(2) = 7e-024
Identities = 24/29 (82%), Positives = 24/29 (82%)
Frame = -3 / -3
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLR 1053
P T TRSSAAGASCPHSPR SRR AAS R
Sbjct: 464 PPTPTRSSAAGASCPHSPRRSRRAAASPR 378
Score = 48.3 bits (99), Expect(2) = 2e-023
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 1054 LREAAVLRDHRGL*GHEAPAAEER 1125
L EAA LRD RGL*GHEAPAAEER
Sbjct: 379 LGEAAALRDRRGL*GHEAPAAEER 450
Score = 41.4 bits (84), Expect(2) = 5e-021
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 1049 RPLERPLFSGTTVDCEGMK 1105
R LERPL SGT VDCEGMK
Sbjct: 374 RTLERPLLSGTAVDCEGMK 430
>gb|CW389606.1|CW389606 fsbb001f074o02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f074o02, DNA
sequence
Length = 640
Score = 81.7 bits (172), Expect(2) = 5e-021
Identities = 35/46 (76%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 917 PSMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRP 1054
P R VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRP
Sbjct: 302 PGKRAKIRTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRP 439
Score = 78.5 bits (165), Expect(3) = 3e-023
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = -2 / -2
Query: 1056 KGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRL 934
+GRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+R+
Sbjct: 441 QGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRI 319
Score = 46.9 bits (96), Expect(3) = 3e-023
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -1 / -1
Query: 1108 GLHALTVHGGPGEQRPL*G 1052
GLHALTVHGGPGEQRPL G
Sbjct: 601 GLHALTVHGGPGEQRPLQG 545
Score = 41.4 bits (84), Expect(2) = 5e-021
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 1049 RPLERPLFSGTTVDCEGMK 1105
R LERPL SGT VDCEGMK
Sbjct: 542 RTLERPLLSGTAVDCEGMK 598
Score = 22.6 bits (43), Expect(3) = 3e-023
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3 / -2
Query: 1139 PGTLTRSSAAGASCP 1095
P T TRSSAAG P
Sbjct: 633 PPTPTRSSAAGGFMP 589
>gb|CW488377.1|CW488377 fsbb001f254m01k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f254m01, DNA
sequence
Length = 604
Score = 83.1 bits (175), Expect(2) = 6e-023
Identities = 37/48 (77%), Positives = 38/48 (79%)
Frame = +1 / +1
Query: 937 PNRRHLNAVDGEIRPVTAGLRRVHGLFHGEREQRLRAPTLREAAVLRD 1080
P R HLNAVDGEIR V AGLRRVH LFHGEREQRLRAPTL V R+
Sbjct: 241 PYRGHLNAVDGEIRFVIAGLRRVHDLFHGEREQRLRAPTLPTTPVDRE 384
Score = 81.7 bits (172), Expect(2) = 5e-021
Identities = 35/46 (76%), Positives = 36/46 (78%)
Frame = +2 / +2
Query: 917 PSMRPTSLIVDTSTPLMAKLDLSPLVCAASMVCFTVSGSSVCALRP 1054
P R VDTSTP MAKLDLS L CAASM+CFTVSGSSVCALRP
Sbjct: 221 PGKRAKIRTVDTSTPSMAKLDLSSLACAASMICFTVSGSSVCALRP 358
Score = 78.5 bits (165), Expect(2) = 5e-023
Identities = 33/41 (80%), Positives = 38/41 (92%)
Frame = -2 / -2
Query: 1056 KGRSAQTLLPLTVKQTMDAAQTSGDRSNFAINGVEVSTIRL 934
+GRSAQTLLPLTVKQ MDAAQ S D+SNFAI+GVEVST+R+
Sbjct: 360 QGRSAQTLLPLTVKQIMDAAQASDDKSNFAIDGVEVSTVRI 238
Score = 51.5 bits (106), Expect(2) = 5e-023
Identities = 23/29 (79%), Positives = 23/29 (79%)
Frame = -3 / -3
Query: 1139 PGTLTRSSAAGASCPHSPRWSRRTAASLR 1053
P T TR SAAGASCPHSPR SRR AAS R
Sbjct: 551 PPTPTRFSAAGASCPHSPRRSRRAAASPR 465
Score = 46.4 bits (95), Expect(2) = 6e-023
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = +1 / +1
Query: 1054 LREAAVLRDHRGL*GHEAPAAEER 1125
L EAA LRD RGL*GHEAPAAE+R
Sbjct: 466 LGEAAALRDRRGL*GHEAPAAEKR 537
Score = 41.4 bits (84), Expect(2) = 5e-021
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / +2
Query: 1049 RPLERPLFSGTTVDCEGMK 1105
R LERPL SGT VDCEGMK
Sbjct: 461 RTLERPLLSGTAVDCEGMK 517
>gb|CW389605.1|CW389605 fsbb001f074o02f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f074o02, DNA
sequence
Length = 679
Score = 67.5 bits (141), Expect(3) = 3e-021
Identities = 30/39 (76%), Positives = 31/39 (79%)
Frame = +1 / -2
Query: 964 DGEIRPVTAGLRRVHGLFHGEREQRLRAPTLREAAVLRD 1080
DGEIR V AGLRRVH LFHGEREQRLRAPTL V R+
Sbjct: 678 DGEIRFVIAGLRRVHDLFHGEREQRLRAPTLPTTPVDRE 562
Score = 48.3 bits (99), Expect(3) = 3e-021
Identities = 21/24 (87%), Positives = 21/24 (87%)
Frame = +1 / -2
Query: 1054 LREAAVLRDHRGL*GHEAPAAEER 1125
L EAA LRD RGL*GHEAPAAEER
Sbjct: 480 LGEAAALRDRRGL*GHEAPAAEER 409
Score = 25.4 bits (49), Expect(3) = 3e-021
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +3 / -2
Query: 1206 PKP*ASRGRK 1235
PKP*ASRGRK
Sbjct: 330 PKP*ASRGRK 301
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,420,831,847
Number of Sequences: 832831
Number of extensions: 20895764
Number of successful extensions: 123692
Number of sequences better than 1.0e-020: 31
length of database: 163,786,556
effective HSP length: 56
effective length of database: 117,148,020
effective search space used: 43696211460
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)