TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2437842.2.1
(1093 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkal... 337 e-116
gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkal... 406 e-112
gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced ... 306 e-100
gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/c... 281 4e-099
gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinol... 353 2e-096
gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves... 330 2e-089
gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorgh... 203 6e-089
gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum m... 196 7e-087
gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorgh... 160 2e-080
gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorgh... 168 2e-072
gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1... 268 1e-070
gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation... 121 3e-069
gb|CW380206.1|CW380206 fsbb001f059o07f0 Sorghum methylation... 139 1e-068
gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated ... 167 3e-065
gb|CW157694.1|CW157694 104_561_11147661_116_36391_093 Sorgh... 203 3e-064
gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorgh... 137 2e-061
gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorgh... 177 5e-061
gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorgh... 177 5e-061
gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorgh... 182 7e-060
gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seed... 227 2e-058
gb|CN143608.1|CN143608 WOUND1_17_G06.b1_A002 Wounded leaves... 190 6e-058
gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methy... 174 1e-057
gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-defic... 222 8e-057
gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorgh... 171 2e-056
gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkal... 216 5e-055
gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorgh... 144 4e-054
gb|CW128047.1|CW128047 104_509_11113781_148_34748_023 Sorgh... 203 5e-051
gb|CW273595.1|CW273595 104_746_11403983_148_35368_094 Sorgh... 201 2e-050
gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle... 200 3e-050
gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots S... 164 7e-050
gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stres... 196 4e-049
gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorgh... 152 3e-046
gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1... 184 2e-045
gb|CW331180.1|CW331180 104_828_11480770_116_36026_041 Sorgh... 113 4e-045
gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stresse... 180 4e-044
gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation... 179 8e-044
gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed see... 175 1e-042
gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum m... 118 7e-041
gb|CL190994.1|CL190994 104_409_10906471_116_32496_022 Sorgh... 165 1e-039
gb|CW426309.1|CW426309 fsbb001f137k03k0 Sorghum methylation... 146 7e-034
gb|CW194291.1|CW194291 104_617_11180020_116_36786_008 Sorgh... 82 8e-033
gb|BE597495.1|BE597495 PI1_70_C05.b1_A002 Pathogen induced ... 142 8e-033
gb|CW380207.1|CW380207 fsbb001f059o07k0 Sorghum methylation... 139 8e-032
gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorgh... 81 4e-031
gb|CW186709.1|CW186709 104_604_11166709_116_36709_051 Sorgh... 136 7e-031
gb|CW222301.1|CW222301 104_657_11202303_148_37174_052 Sorgh... 131 2e-029
gb|CW353056.1|CW353056 fsbb001f015k03f0 Sorghum methylation... 82 5e-029
gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adap... 76 1e-027
gb|CW302339.1|CW302339 104_786_11464668_116_35663_040 Sorgh... 125 1e-027
gb|CW079348.1|CW079348 104_400_10899868_114_32401_010 Sorgh... 99 1e-026
gb|CW361238.1|CW361238 fsbb001f029k23k0 Sorghum methylation... 121 3e-026
gb|BI643612.1|BI643612 DG1_91_B11.b1_A002 Dark Grown 1 (DG1... 63 2e-025
gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation... 71 5e-025
gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorgh... 71 3e-024
gb|CW090129.1|CW090129 104_435_10949104_116_32613_050 Sorgh... 112 8e-024
gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stres... 86 1e-023
gb|CW090128.1|CW090128 104_435_10949104_114_32612_050 Sorgh... 111 3e-023
gb|CX613072.1|CX613072 GABR1_6_C10.b1_A002 GA- or brassinol... 105 4e-023
gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves... 108 2e-022
gb|BZ329364.1|BZ329364 hv85d06.b1 WGS-SbicolorF (JM107 adap... 107 3e-022
gb|CW077546.1|CW077546 104_382_10892899_148_31762_115 Sorgh... 103 6e-021
gb|CW186710.1|CW186710 104_604_11166709_148_36710_051 Sorgh... 103 6e-021
gb|CW432107.1|CW432107 fsbb001f146k07k0 Sorghum methylation... 103 6e-021
gb|CW304120.1|CW304120 104_788_11465610_148_35698_065 Sorgh... 65 7e-021
gb|CW359305.1|CW359305 fsbb001f026n23k0 Sorghum methylation... 102 8e-021
>gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E03_A002 3', mRNA sequence
Length = 850
Score = 337 bits (731), Expect(2) = e-116
Identities = 136/163 (83%), Positives = 150/163 (92%)
Frame = +1 / +2
Query: 70 PMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELK 249
PMGKD++DAFMAK+P AVLGQGYGMTEAGPVL+MCLAFAKEPF+VKSG+CGTVVRNAELK
Sbjct: 155 PMGKDIEDAFMAKLPGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELK 334
Query: 250 IVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEI 429
IVDPDT SL RN PGEICIRG+QIMKGYLN+P+ATKN+ID DGWLHTGD+G+VDDDDEI
Sbjct: 335 IVDPDTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEI 514
Query: 430 FIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDE 558
FIVDRLKEIIKYKG QV PAE+EALLITHP I DAAVV + E
Sbjct: 515 FIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVVGKQVE 643
Score = 213 bits (460), Expect = 3e-054
Identities = 100/163 (61%), Positives = 106/163 (65%)
Frame = -3 / -2
Query: 557 SSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHP 378
S+ TTAAS + G VM RAS SAG TW+PLY + PVCS P
Sbjct: 642 STCFPTTAASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQP 463
Query: 377 SLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTS 198
S SM+FFVASG FR*PFMIC P M ISPG FR D VSGSTI SSA TTVP PD T
Sbjct: 462 SASMLFFVASGLFR*PFMICWPLMQISPGRFRARDLPVSGSTILSSALRTTVPHAPDFTL 283
Query: 197 NGSLAKARHMASTGPASVIPYPWPSTALGILAMNASWRSFPMG 69
GSLA ARHM STGPASV+PYP PSTA G LAM AS SFPMG
Sbjct: 282 KGSLANARHMDSTGPASVMPYPCPSTAPGSLAMKASSMSFPMG 154
Score = 177 bits (382), Expect(2) = 6e-052
Identities = 84/156 (53%), Positives = 104/156 (66%)
Frame = -2 / -1
Query: 543 DNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLING 364
D+SGI D + DE+G L R +LE LV LL+PV+DEDL VQP+V ++
Sbjct: 628 DDSGIGDAWVGDEQGLYLCRGHLETLVLYDLLKPVDDEDLVVVVHKADVAGVQPTVSVDA 449
Query: 363 VLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLG 184
+L R+ ++Q+TFHDL A DA L+ VP + AGV VDDL+L V A AGL LE LLG
Sbjct: 448 ILRRIRVVQVTFHDLLAPDADLSGEVPGEGLAGVGVDDLELGVAHHRAARAGLHLEGLLG 269
Query: 183 EGQAHGQHGPRLGHPVPLAEHGVGDLGHERVLEVLP 76
E QAHGQH P L H VPL+EHG G+LGHE VL+VLP
Sbjct: 268 ERQAHGQHRPSLRHAVPLSEHGAGELGHEGVLDVLP 161
Score = 111 bits (237), Expect(3) = 3e-033
Identities = 50/108 (46%), Positives = 65/108 (60%)
Frame = +3 / +1
Query: 69 AHGEGPPGRVHGQDPQXXXXXXXXXXXXXXXXXHVPGLRQGAVRGQVRLLWHRRQERGAE 248
AHGEG GR+HGQ P+ HVPG+RQGA++G+VR + H +R A+
Sbjct: 154 AHGEGHRGRLHGQAPRRRARTGVRHDGGWAGAVHVPGVRQGALQGEVRRVRHGGAQRRAQ 333
Query: 249 DRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
DRRPRH++V EP RRD+H +HERL E D+E H R+AAH
Sbjct: 334 DRRPRHRQVPRPEPPRRDLHQGPADHERLPEQPGCDEE*HRR*RLAAH 477
Score = 103 bits (219), Expect(2) = e-116
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = +1 / +2
Query: 532 AAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPS 711
A V + GE+PVAF+ +++GSE+SE+++KQFVAKEV++YK++ V F D IPK PS
Sbjct: 620 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 799
Query: 712 GKILRKDLRARL 747
GKILRK+LR +L
Sbjct: 800 GKILRKELRKQL 835
Score = 48.7 bits (100), Expect(2) = 6e-052
Identities = 30/70 (42%), Positives = 34/70 (48%)
Frame = -3 / -2
Query: 737 LRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTSPAT 558
L S ILP+G GI S+K TS ATNCL S SL S P ATG SP +
Sbjct: 825 LSSLRNILPDGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPIS 646
Query: 557 SSFIETTAAS 528
S T A+
Sbjct: 645 GSTCFPTTAA 616
Score = 38.2 bits (77), Expect(3) = 3e-033
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3 / +1
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRC 539
QA GD+++QG P C P+HH ++ CRC
Sbjct: 526 QA*GDHKVQGSPGGPCRDRGPAHHPPKHRRCRC 624
Score = 32.2 bits (64), Expect(3) = 3e-033
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3 / +1
Query: 627 QAVCCKGGRVLQEDQQSFLHGFYPEESLRQDS*EGPESAA 746
Q +C +GG +LQE S LH P+ + QD +G + AA
Sbjct: 715 QTICGQGGDLLQEGP*SDLH*QDPQGPIGQDIAQGAKEAA 834
>gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H09_A002 3', mRNA sequence
Length = 733
Score = 406 bits (880), Expect = e-112
Identities = 164/216 (75%), Positives = 191/216 (88%)
Frame = +1 / +2
Query: 127 GQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEIC 306
GQGYGMTEAGPVL+MC+AFAKEP VKSG+CGTVVRNAELKIVDPDT SL RNQPGEIC
Sbjct: 2 GQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEIC 181
Query: 307 IRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPP 486
IRG+Q+MKGYLN+PEAT TID +GWL TGDIGYVDDDDEIFIVDRLKE+IKYKGFQV P
Sbjct: 182 IRGKQLMKGYLNNPEATAKTIDDEGWLDTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAP 361
Query: 487 AELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKR 666
AELEA+LI HP I DAAVV MKD+ GE+PVAF++ S G E++E+EIKQ+VAK+VVFYKR
Sbjct: 362 AELEAMLIAHPSIADAAVVPMKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKR 541
Query: 667 INRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDN 774
+++VFF ++IPK PSGKILRKDLRA+LA+G + +
Sbjct: 542 LHKVFFVEAIPKAPSGKILRKDLRAKLASGFSNGSS 649
Score = 254 bits (550), Expect = 1e-066
Identities = 124/210 (59%), Positives = 131/210 (62%)
Frame = -3 / -2
Query: 755 PAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNAT 576
P AS ALRSFLRILP+G GI S KK T FAT CLIS S+IS P NAT
Sbjct: 630 PDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS*PPDVTTNAT 451
Query: 575 GTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXX 396
G SP SSFI TTAAS + G M ASSSAG TW PLYL+
Sbjct: 450 GISPQESSFIGTTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMKISSSSSTYPMS 271
Query: 395 PVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQ 216
PV SHPS SMVF VASG R PF+ C P M ISPGW R D+ VSGSTI SSAFLTTVPQ
Sbjct: 270 PVSSHPSSSMVFAVASGLLRYPFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQ 91
Query: 215 EPDLTSNGSLAKARHMASTGPASVIPYPWP 126
PD T NGS A A H+ STGPASVIPYP P
Sbjct: 90 APDFTGNGSFANAMHIESTGPASVIPYPCP 1
Score = 141 bits (303), Expect(2) = 1e-040
Identities = 68/154 (44%), Positives = 92/154 (59%)
Frame = -2 / -1
Query: 591 YNECHRDFAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXX 412
++E HRD A + H + G+ D + DE G +LRR LE LV D LL+PV+DEDL
Sbjct: 466 HDERHRDLAAGVVLHWHDGGVGDAGVGDEHGLELRRSDLEPLVLDELLEPVDDEDLVVVV 287
Query: 411 XXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVP 232
VQP +++G+ L ++++ FH L A DA L LV ++ + GV VDDL+L VP
Sbjct: 286 DVPNVSGVQPPFIVDGLRRGLRVVEVPFHQLLAPDANLPGLVAAEGQPGVRVDDLELGVP 107
Query: 231 DDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPL 130
A GAGL +RLL + AH +HG L HPVPL
Sbjct: 106 HHRAAGAGLHRQRLLCKRHAH*EHGSCLCHPVPL 5
Score = 78.0 bits (164), Expect(3) = 2e-031
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +3 / +1
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
QA+G +Q+QG+PS S GA +H ++ R +E RR PGG+ RL D
Sbjct: 316 QAQGAHQVQGVPSRSGGARGHAHRPPQHRRRRRRANEGRLLRRDPGGVRRDVRRLRDDRG 495
Query: 621 RDQAVCCKGGRVLQEDQQSFLHGFYPEESLRQDS*EGPESAA 746
RDQ V + G VLQE Q L G YP+ ++ QDS EG ES A
Sbjct: 496 RDQTVRGETGGVLQEAAQGLLRGGYPQGAIWQDSEEGSESKA 621
Score = 66.1 bits (138), Expect(3) = 2e-031
Identities = 32/75 (42%), Positives = 45/75 (60%)
Frame = +3 / +1
Query: 168 HVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*S 347
+V G+ +GAV G+VR L H +ER A+DRRP H+ V +PAR D+H + ER+ +
Sbjct: 43 NVHGVCKGAVAGEVRRLRHGGEERRAQDRRPGHRAVPPPQPARGDLHQGQAVDERVPQQP 222
Query: 348 RGDKEHH**GRMAAH 392
G E H R+A H
Sbjct: 223 GGHGEDHRR*RVAGH 267
Score = 46.9 bits (96), Expect(2) = 1e-040
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = -1 / -3
Query: 745 AALSGPS*ESCRRDSSG*NP*RKLC*SSCRTRPPLQQTA*SRSH*SQSLHCV**MPPG 572
A LS PS ESC+ G* P R+ C +SCRT P +T *SR S+S PPG
Sbjct: 620 ALLSDPSSESCQMAPWG*PPRRRPCAASCRTPPVSPRTV*SRPRSSRSRRTSRRTPPG 447
Score = 31.8 bits (63), Expect(3) = 2e-031
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +2 / +3
Query: 131 RGTG*PRRGPCWPCAW 178
RGTG* R+ PC CAW
Sbjct: 6 RGTG*QRQDPCSQCAW 53
>gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 306 bits (663), Expect(2) = e-100
Identities = 124/149 (83%), Positives = 136/149 (91%)
Frame = +1 / +3
Query: 112 PNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQ 291
P AVLGQGYGMTEAGPVL+MCLAFAKEPF+VKSG+CGTVVRNAELKIVDPDT SL RN
Sbjct: 3 PGAVLGQGYGMTEAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKIVDPDTGKSLARNL 182
Query: 292 PGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKG 471
PGEICIRG+QIMKGYLN+P+ATKN+ID DGWLHTGD+G+VDDDDEIFIVDRLKEIIKYKG
Sbjct: 183 PGEICIRGQQIMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKG 362
Query: 472 FQVPPAELEALLITHPEIKDAAVVSMKDE 558
QV PAE+EALLITHP I DA+VV + E
Sbjct: 363 LQVAPAEIEALLITHPSIADASVVGKQVE 449
Score = 191 bits (412), Expect(2) = 5e-053
Identities = 89/149 (59%), Positives = 95/149 (63%)
Frame = -3 / -2
Query: 557 SSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHP 378
S+ TT AS + G VM RAS SAG TW+PLY + PVCS P
Sbjct: 448 STCFPTTEASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQP 269
Query: 377 SLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTS 198
S SM+FFVASG FR*PFMIC P M ISPG FR D VSGSTI SSA TTVP PD T
Sbjct: 268 SASMLFFVASGLFR*PFMICWPLMQISPGRFRARDLPVSGSTILSSALRTTVPHAPDFTL 89
Query: 197 NGSLAKARHMASTGPASVIPYPWPSTALG 111
GSLA ARHM STGPASV+PYP PSTA G
Sbjct: 88 KGSLANARHMDSTGPASVMPYPCPSTAPG 2
Score = 153 bits (329), Expect = 4e-036
Identities = 74/144 (51%), Positives = 92/144 (63%)
Frame = -2 / -1
Query: 543 DNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLING 364
D+ GI D + DE+G L R +LE LV LL+PV+DEDL VQP+V ++
Sbjct: 434 DDRGIGDAWVGDEQGLYLCRGHLETLVLYDLLKPVDDEDLVVVVHKADVAGVQPTVSVDA 255
Query: 363 VLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLG 184
+L R+ ++Q+TFHDL A DA L+ VP + AGV VDDL+L V A AGL LE LLG
Sbjct: 254 ILRRIRVVQVTFHDLLAPDADLSGEVPGEGLAGVGVDDLELGVAHHRAARAGLHLEGLLG 75
Query: 183 EGQAHGQHGPRLGHPVPLAEHGVG 112
E QAHGQH P L H VPL+EHG G
Sbjct: 74 ERQAHGQHRPSLRHAVPLSEHGAG 3
Score = 89.5 bits (189), Expect(4) = 7e-029
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3 / +2
Query: 168 HVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*S 347
HVPG+RQGA++G+VR + H +R A+DRRPRH++V EP RRD+H +HERL E
Sbjct: 59 HVPGVRQGALQGEVRRVRHGGAQRRAQDRRPRHRQVPRPEPPRRDLHQGPADHERLPEQP 238
Query: 348 RGDKEHH**GRMAAH 392
D+E H R+AAH
Sbjct: 239 GCDEE*HRR*RLAAH 283
Score = 81.3 bits (171), Expect(2) = e-100
Identities = 28/51 (54%), Positives = 42/51 (82%)
Frame = +1 / +3
Query: 565 GEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGK 717
GE+PVAF+ +++GSE+SE+++KQFVAKEV++YK++ V F D IPK P +
Sbjct: 459 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPRAR 611
Score = 38.6 bits (78), Expect(2) = 5e-053
Identities = 24/55 (43%), Positives = 26/55 (47%)
Frame = -3 / -2
Query: 716 LPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTSPATSS 552
L G GI S+K TS ATNCL S SL S P ATG SP + S
Sbjct: 610 LARGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPISGS 446
Score = 35.4 bits (71), Expect(4) = 7e-029
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2 / +1
Query: 122 CSARGTG*PRRGPCWPCAW 178
CS RGT * R G C PCAW
Sbjct: 13 CSDRGTA*RRLGRCCPCAW 69
Score = 35.0 bits (70), Expect(4) = 7e-029
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3 / +2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRC 539
QA GD+++QG P C P+HH ++ C C
Sbjct: 332 QA*GDHKVQGSPGGPCRDRGPAHHPPKHRRCLC 430
Score = 24.4 bits (47), Expect(4) = 7e-029
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3 / +2
Query: 627 QAVCCKGGRVLQEDQQSFLH 686
Q +C +GG +LQE S LH
Sbjct: 521 QTICGQGGDLLQEGP*SDLH 580
>gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 3', mRNA sequence
Length = 613
Score = 281 bits (607), Expect(2) = 4e-099
Identities = 114/137 (83%), Positives = 125/137 (91%)
Frame = +1 / +1
Query: 148 EAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIM 327
EAGPVL+MCLAFAKEPF+VKSG+CGTVVRNAELKIVDPDT SL RN PGEICIRG+QIM
Sbjct: 1 EAGPVLSMCLAFAKEPFKVKSGACGTVVRNAELKIVDPDTGKSLARNLPGEICIRGQQIM 180
Query: 328 KGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALL 507
KGYLN+P+ATKN+ID DGWLHTGD+G+VDDDDEIFIVDRLKEIIKYKG QV PAE+EALL
Sbjct: 181 KGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALL 360
Query: 508 ITHPEIKDAAVVSMKDE 558
ITHP I DAAVV + E
Sbjct: 361 ITHPSIADAAVVGKQVE 411
Score = 170 bits (366), Expect = 3e-041
Identities = 80/136 (58%), Positives = 85/136 (62%)
Frame = -3 / -3
Query: 557 SSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHP 378
S+ TTAAS + G VM RAS SAG TW+PLY + PVCS P
Sbjct: 410 STCFPTTAASAMLGWVMSRASISAGATWRPLYFMISLSLSTMKISSSSSTKPTSPVCSQP 231
Query: 377 SLSMVFFVASGSFR*PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTS 198
S SM+FFVASG FR*PFMIC P M ISPG FR D VSGSTI SSA TTVP PD T
Sbjct: 230 SASMLFFVASGLFR*PFMICWPLMQISPGRFRARDLPVSGSTILSSALRTTVPHAPDFTL 51
Query: 197 NGSLAKARHMASTGPA 150
GSLA ARHM STGPA
Sbjct: 50 KGSLANARHMDSTGPA 3
Score = 134 bits (288), Expect(2) = 4e-039
Identities = 67/132 (50%), Positives = 84/132 (63%)
Frame = -2 / -2
Query: 543 DNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLING 364
D+SGI D + DE+G L R +LE LV LL+PV+DEDL VQP+V ++
Sbjct: 396 DDSGIGDAWVGDEQGLYLCRGHLETLVLYDLLKPVDDEDLVVVVHKADVAGVQPTVSVDA 217
Query: 363 VLCRLWIIQITFHDLFAADAYLAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLG 184
+L R+ ++Q+TFHDL A DA L+ VP + AGV VDDL+L V A AGL LE LLG
Sbjct: 216 ILRRIRVVQVTFHDLLAPDADLSGEVPGEGLAGVGVDDLELGVAHHRAARAGLHLEGLLG 37
Query: 183 EGQAHGQHGPRL 148
E QAHGQH P L
Sbjct: 36 ERQAHGQHRPSL 1
Score = 103 bits (219), Expect(2) = 4e-099
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = +1 / +1
Query: 532 AAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPS 711
A V + GE+PVAF+ +++GSE+SE+++KQFVAKEV++YK++ V F D IPK PS
Sbjct: 388 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 567
Query: 712 GKILRKDLRARL 747
GKILRK+LR +L
Sbjct: 568 GKILRKELRKQL 603
Score = 89.5 bits (189), Expect(4) = 1e-028
Identities = 39/75 (52%), Positives = 52/75 (69%)
Frame = +3 / +3
Query: 168 HVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*S 347
HVPG+RQGA++G+VR + H +R A+DRRPRH++V EP RRD+H +HERL E
Sbjct: 21 HVPGVRQGALQGEVRRVRHGGAQRRAQDRRPRHRQVPRPEPPRRDLHQGPADHERLPEQP 200
Query: 348 RGDKEHH**GRMAAH 392
D+E H R+AAH
Sbjct: 201 GCDEE*HRR*RLAAH 245
Score = 48.7 bits (100), Expect(2) = 4e-039
Identities = 30/70 (42%), Positives = 34/70 (48%)
Frame = -3 / -3
Query: 737 LRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTSPAT 558
L S ILP+G GI S+K TS ATNCL S SL S P ATG SP +
Sbjct: 593 LSSLRNILPDGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPIS 414
Query: 557 SSFIETTAAS 528
S T A+
Sbjct: 413 GSTCFPTTAA 384
Score = 38.2 bits (77), Expect(4) = 1e-028
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +3 / +3
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRC 539
QA GD+++QG P C P+HH ++ CRC
Sbjct: 294 QA*GDHKVQGSPGGPCRDRGPAHHPPKHRRCRC 392
Score = 32.2 bits (64), Expect(4) = 1e-028
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3 / +3
Query: 627 QAVCCKGGRVLQEDQQSFLHGFYPEESLRQDS*EGPESAA 746
Q +C +GG +LQE S LH P+ + QD +G + AA
Sbjct: 483 QTICGQGGDLLQEGP*SDLH*QDPQGPIGQDIAQGAKEAA 602
Score = 23.5 bits (45), Expect(4) = 1e-028
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2 / +2
Query: 149 RRGPCWPCAW 178
R G C PCAW
Sbjct: 2 RLGRCCPCAW 31
>gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 3', mRNA sequence
Length = 693
Score = 353 bits (766), Expect = 2e-096
Identities = 144/159 (90%), Positives = 158/159 (99%)
Frame = +1 / +3
Query: 283 RNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIK 462
RNQPGEICIRGEQIMKGYLND E+TKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIK
Sbjct: 3 RNQPGEICIRGEQIMKGYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIK 182
Query: 463 YKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVA 642
YKGFQVPPAELEALLITHPEIKDAAVVSMKD++AGE+PVAFI+R+EGSE++E+EIKQFVA
Sbjct: 183 YKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVA 362
Query: 643 KEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 759
KEVVFYK+I++VFFT+SIPKNPSGKILRKDLRARLAAG+
Sbjct: 363 KEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 479
Score = 232 bits (501), Expect = 8e-060
Identities = 106/158 (67%), Positives = 114/158 (72%)
Frame = -3 / -3
Query: 755 PAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNAT 576
PAAS AL+SFLRILP+GF G++SVKK TS ATNCLIS S+ SEPS+R M AT
Sbjct: 475 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVTSEPSVRTMKAT 296
Query: 575 GTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXX 396
G SPA SSFI+TTAASLISGCVMR ASSSAGGTW PLYL+
Sbjct: 295 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMKISSSSST*PMS 116
Query: 395 PVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGWFR 282
PVCS PSLSMVFFV S SFR*PFMICSPRM ISPGWFR
Sbjct: 115 PVCSQPSLSMVFFVDSRSFR*PFMICSPRMQISPGWFR 2
Score = 160 bits (345), Expect = 3e-038
Identities = 77/156 (49%), Positives = 97/156 (62%)
Frame = -2 / -2
Query: 750 GKPRSQVLPKNLAGGILRDRIREENSVDPLVEHXXXXXXXXXXXXXXLRAFTAYNECHRD 571
G+P SQVLP +LAG +L D EEN VD LVE+ RAF ++E RD
Sbjct: 470 GEPGSQVLP*DLAGRVLGDGFSEENLVDLLVENHLLGDKLLDLILGDFRAFGPHDEGDRD 291
Query: 570 FAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXX 391
F I H + G+LD R+ DE+ +L RR+LE LV D LL+PV+DEDL
Sbjct: 290 FTSKIILH*HDGGVLDLRVRDEERLELGRRHLEPLVLDDLLEPVDDEDLVVVVDIADVAG 111
Query: 390 VQPSVLINGVLCRLWIIQITFHDLFAADAYLAWLVP 283
VQP+VL++GVLCRL ++Q+TFHDL AADA LA LVP
Sbjct: 110 VQPAVLVDGVLCRLKVVQVTFHDLLAADADLAGLVP 3
Score = 95.0 bits (201), Expect(2) = 7e-031
Identities = 48/104 (46%), Positives = 63/104 (60%)
Frame = +3 / +2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
QA+GD+Q+QG+P + A HH +QG R ++E *S +PG +H RL*
Sbjct: 161 QAQGDHQVQGVPGAAGRARGAPHHAPGDQGRRRRVNEG*SCW*NPGRLHRADRRL*SHRG 340
Query: 621 RDQAVCCKGGRVLQEDQQSFLHGFYPEESLRQDS*EGPESAACR 752
DQA+C +GG LQED Q FLH +P+E +RQD EG ES A R
Sbjct: 341 *DQAICRQGGGFLQEDPQGFLH*IHPQEPVRQDPKEGLESQARR 472
Score = 61.1 bits (127), Expect(2) = 7e-031
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 285 EPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
EPARRD+HPRR +HERL E DKEHH GR+AAH
Sbjct: 5 EPARRDLHPRRADHERLPERP*VDKEHHRQGRLAAH 112
>gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A03_A002 5', mRNA sequence
Length = 682
Score = 330 bits (715), Expect = 2e-089
Identities = 138/143 (96%), Positives = 142/143 (99%)
Frame = +1 / +3
Query: 241 ELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDD 420
ELKIVDPDTS SLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDD
Sbjct: 252 ELKIVDPDTSESLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDD 431
Query: 421 DEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSE 600
DEIFIVDRLKEIIKYKGFQVPPAE+EALLITHPEI+DAAVVSMKDE+AGEVPVAFII+SE
Sbjct: 432 DEIFIVDRLKEIIKYKGFQVPPAEVEALLITHPEIRDAAVVSMKDELAGEVPVAFIIQSE 611
Query: 601 GSEISENEIKQFVAKEVVFYKRI 669
GSEISENEIKQFVAKEVVFYKRI
Sbjct: 612 GSEISENEIKQFVAKEVVFYKRI 680
Score = 253 bits (547), Expect = 3e-066
Identities = 111/136 (81%), Positives = 114/136 (83%)
Frame = -3 / -1
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFIETTAASLISGCVMRRASSSAGGTWKP 468
SFATNCLISFSLISEPSL IMNATGTSPA+SSFIETTAASLISGCVMRRAS+SAGGTWKP
Sbjct: 658 SFATNCLISFSLISEPSLCIMNATGTSPASSSFIETTAASLISGCVMRRASTSAGGTWKP 479
Query: 467 LYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGW 288
LYLI PVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGW
Sbjct: 478 LYLIISLSLSTMNISSSSST*PMSPVCSHPSLSMVFFVASGSFR*PFMICSPRMHISPGW 299
Query: 287 FRPSDALVSGSTIFSS 240
FRPSD+LVSGSTI SS
Sbjct: 298 FRPSDSLVSGSTILSS 251
Score = 224 bits (484), Expect = 2e-057
Identities = 97/143 (67%), Positives = 104/143 (72%)
Frame = -2 / -3
Query: 669 DPLVEHXXXXXXXXXXXXXXLRAFTAYNECHRDFAGDFIFHRDNSGILDFRMCDEKGFKL 490
DPLVEH LRAFT YNEC+RDFA FIFH DN I +FRMC+EKG
Sbjct: 680 DPLVEHDLLCNKLFDLVLTNLRAFTLYNECNRDFASKFIFH*DNCSIPNFRMCNEKGLNF 501
Query: 489 RRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLINGVLCRLWIIQITFHDLFAA 310
RRRYLEALVFDYLL+PVN+E L VQPS+LINGVLCR WIIQITFHDLFAA
Sbjct: 500 RRRYLEALVFDYLLEPVNNEYLIVIVHITNVPSVQPSILINGVLCRFWIIQITFHDLFAA 321
Query: 309 DAYLAWLVPSQRRAGVWVDDLQL 241
DAYLAWLV SQR AGVWVDDL+L
Sbjct: 320 DAYLAWLVSSQRLAGVWVDDLEL 252
Score = 139 bits (298), Expect(2) = 3e-060
Identities = 61/77 (79%), Positives = 67/77 (87%)
Frame = +3 / +2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*E 620
QA+GDNQIQGLPSTSCG+* PSH+TS*N GC CL+ER*+ RSP IHYT+*RL*D *E
Sbjct: 452 QAQGDNQIQGLPSTSCGS*GPSHYTS*N*GCCSCLNER*TCWRSPCCIHYTE*RL*D**E 631
Query: 621 RDQAVCCKGGRVLQEDQ 671
RDQ VCCKGGRVLQEDQ
Sbjct: 632 RDQTVCCKGGRVLQEDQ 682
Score = 115 bits (245), Expect(2) = 3e-060
Identities = 47/51 (92%), Positives = 49/51 (96%)
Frame = +3 / +2
Query: 240 GAEDRRPRHQRVAGTEPARRDMHPRRTNHERLSE*SRGDKEHH**GRMAAH 392
GA+DRRPRHQRVAGT+PARRDMHPRRTNHERLSE*SR DKEHH**G MAAH
Sbjct: 251 GAQDRRPRHQRVAGTKPARRDMHPRRTNHERLSE*SRSDKEHH**GWMAAH 403
Score = 102 bits (218), Expect(2) = 1e-045
Identities = 41/44 (93%), Positives = 41/44 (93%)
Frame = -1 / -2
Query: 388 AAIRPYQWCSLSPLDHSDNLS*FVRRGCISRLAGSVPATRWCLG 257
AAI PYQWCSLS LDHSDNLS*FVRRGCISRLAG VPATRWCLG
Sbjct: 399 AAIHPYQWCSLSLLDHSDNLS*FVRRGCISRLAGFVPATRWCLG 268
Score = 102 bits (218), Expect(2) = 1e-045
Identities = 53/72 (73%), Positives = 53/72 (73%)
Frame = -1 / -2
Query: 670 *SSCRTRPPLQQTA*SRSH*SQSLHCV**MPPGXXXXXXXXXXXXXHP*FQDV**EGLQA 491
*SSCRTRPPLQQT *SRSH*SQSLH V**M G HP*FQDV**EG Q
Sbjct: 681 *SSCRTRPPLQQTV*SRSH*SQSLHSV**MQQGLRQQVHLSLRQLQHP*FQDV**EGPQL 502
Query: 490 PQEVLGSPCI*L 455
PQEVLGSPCI*L
Sbjct: 501 PQEVLGSPCI*L 466
Score = 90.9 bits (192), Expect(2) = 4e-030
Identities = 39/43 (90%), Positives = 40/43 (93%)
Frame = +2 / +1
Query: 260 QTPARRWDGTSQARYASAANKS*KVI*MIQRRQRTPLIRTDGC 388
QTPA RWD TSQARYASAANKS*KVI*MIQ+RQRTPLIR DGC
Sbjct: 271 QTPASRWDETSQARYASAANKS*KVI*MIQKRQRTPLIRMDGC 399
Score = 62.5 bits (130), Expect(2) = 4e-030
Identities = 31/45 (68%), Positives = 33/45 (73%)
Frame = +2 / +1
Query: 470 ASKYLLRSLKPFSSHILKSRMPLLSR*KMKSPAKSRWHSLYAVKA 604
ASKYLLR L+PFS HILK M LS+*KM AKS HSLY VKA
Sbjct: 481 ASKYLLRKLRPFSLHILKLGMLQLSQ*KMNLLAKSLLHSLYRVKA 615
>gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 739
Score = 203 bits (437), Expect(2) = 6e-089
Identities = 83/109 (76%), Positives = 95/109 (87%)
Frame = +1 / +3
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS + DL+S+RMV+SGAAPMG++LQD AK+P AVLGQGYGMTEAGPVL+MC+AFA
Sbjct: 33 KSDAMDRHDLSSVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCMAFA 212
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKG 333
KEP VKSG+CGTVVRNAELKIVDPDT SL RNQPGEICIRG+Q+MKG
Sbjct: 213 KEPLPVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 359
Score = 161 bits (347), Expect(2) = 2e-048
Identities = 72/109 (66%), Positives = 77/109 (70%)
Frame = -3 / -1
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PF+ C P M ISPGW R D+ VSGSTI SSAFLTTVPQ PD T NGS A A H+ STGP
Sbjct: 358 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 179
Query: 152 ASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
ASVIPYP PSTA G LA + S S PMGAAP+MTMR E RS LL
Sbjct: 178 ASVIPYPCPSTAPGSLARSRSCSSLPMGAAPEMTMRTEERSWRSMASLL 32
Score = 149 bits (321), Expect(2) = 6e-089
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +1 / +1
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLN+PEAT TID +GWLHTGDIGYVDDDDEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 484 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 663
Query: 511 THPEIKDAAVV 543
HP I DAAVV
Sbjct: 664 AHPSIADAAVV 696
Score = 56.1 bits (116), Expect(2) = 2e-048
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = -2 / -2
Query: 546 RDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLIN 367
R + G+ D + DE G +LRR LE LV D LL+PV+DEDL VQP +++
Sbjct: 699 RHDGGVGDAGVGDEHGLELRRSDLEPLVLDELLEPVDDEDLVVVVDVPNVSGVQPPFIVD 520
Query: 366 GVLCRLWIIQI 334
G+ L ++++
Sbjct: 519 GLRRGLRVVEV 487
>gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591543, DNA
sequence
Length = 740
Score = 196 bits (422), Expect(2) = 7e-087
Identities = 79/98 (80%), Positives = 89/98 (90%)
Frame = +1 / +2
Query: 40 SIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSC 219
S+RMV+SGAAPMG++LQD AK+P AVLGQGYGMTEAGPVL+MC+AFAKEP VKSG+C
Sbjct: 2 SVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGAC 181
Query: 220 GTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKG 333
GTVVRNAELKIVDPDT SL RNQPGEICIRG+Q+MKG
Sbjct: 182 GTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 295
Score = 157 bits (338), Expect(2) = 3e-047
Identities = 68/98 (69%), Positives = 73/98 (74%)
Frame = -3 / -3
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PF+ C P M ISPGW R D+ VSGSTI SSAFLTTVPQ PD T NGS A A H+ STGP
Sbjct: 294 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 115
Query: 152 ASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRME 39
ASVIPYP PSTA G LA + S S PMGAAP+MTMR E
Sbjct: 114 ASVIPYPCPSTAPGSLARSRSCSSLPMGAAPEMTMRTE 1
Score = 149 bits (321), Expect(2) = 7e-087
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +1 / +3
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLN+PEAT TID +GWLHTGDIGYVDDDDEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 420 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 599
Query: 511 THPEIKDAAVV 543
HP I DAAVV
Sbjct: 600 AHPSIADAAVV 632
Score = 56.1 bits (116), Expect(2) = 3e-047
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = -2 / -1
Query: 546 RDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLIN 367
R + G+ D + DE G +LRR LE LV D LL+PV+DEDL VQP +++
Sbjct: 635 RHDGGVGDAGVGDEHGLELRRSDLEPLVLDELLEPVDDEDLVVVVDVPNVSGVQPPFIVD 456
Query: 366 GVLCRLWIIQI 334
G+ L ++++
Sbjct: 455 GLRRGLRVVEV 423
>gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 748
Score = 160 bits (343), Expect(3) = 2e-080
Identities = 64/76 (84%), Positives = 70/76 (92%)
Frame = +1 / -3
Query: 106 KIPNAVLGQGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGR 285
K+P AVLGQGYGMTEAGPVL+MC+AFAKEP VKSG+CGTVVRNAELKIVDPDT SL R
Sbjct: 746 KLPGAVLGQGYGMTEAGPVLSMCMAFAKEPLPVKSGACGTVVRNAELKIVDPDTGLSLRR 567
Query: 286 NQPGEICIRGEQIMKG 333
NQPGEICIRG+Q+MKG
Sbjct: 566 NQPGEICIRGKQLMKG 519
Score = 149 bits (321), Expect(3) = 2e-080
Identities = 60/71 (84%), Positives = 64/71 (90%)
Frame = +1 / -1
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLN+PEAT TID +GWLHTGDIGYVDDDDEIFIVDRLKE+IKYKGFQV PAELEA+LI
Sbjct: 394 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 215
Query: 511 THPEIKDAAVV 543
HP I DAAVV
Sbjct: 214 AHPSIADAAVV 182
Score = 127 bits (271), Expect(3) = 1e-039
Identities = 54/76 (71%), Positives = 57/76 (75%)
Frame = -3 / +1
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PF+ C P M ISPGW R D+ VSGSTI SSAFLTTVPQ PD T NGS A A H+ STGP
Sbjct: 520 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 699
Query: 152 ASVIPYPWPSTALGIL 105
ASVIPYP PSTA G L
Sbjct: 700 ASVIPYPCPSTAPGSL 747
Score = 56.1 bits (116), Expect(3) = 1e-039
Identities = 27/71 (38%), Positives = 41/71 (57%)
Frame = -2 / +2
Query: 546 RDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLIN 367
R + G+ D + DE G +LRR LE LV D LL+PV+DEDL VQP +++
Sbjct: 179 RHDGGVGDAGVGDEHGLELRRSDLEPLVLDELLEPVDDEDLVVVVDVPNVSGVQPPFIVD 358
Query: 366 GVLCRLWIIQI 334
G+ L ++++
Sbjct: 359 GLRRGLRVVEV 391
Score = 35.4 bits (71), Expect(3) = 2e-080
Identities = 13/22 (59%), Positives = 17/22 (77%)
Frame = +1 / -3
Query: 547 MKDEVAGEVPVAFIIRSEGSEI 612
MKD+ GE+PVAF++ S G EI
Sbjct: 68 MKDDSCGEIPVAFVVTSGGYEI 3
Score = 24.9 bits (48), Expect(3) = 1e-039
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3 / +1
Query: 611 ISEPSLRIMNATGTSPATSSFI 546
IS P NATG SP SSFI
Sbjct: 4 IS*PPDVTTNATGISPQESSFI 69
>gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 721
Score = 168 bits (361), Expect(3) = 2e-072
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +1 / +2
Query: 334 YLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLIT 513
YLND E+TKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLIT
Sbjct: 2 YLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLIT 181
Query: 514 HPEIKDAAVVS 546
HPEIKDAAVVS
Sbjct: 182 HPEIKDAAVVS 214
Score = 93.2 bits (197), Expect(3) = 1e-036
Identities = 44/71 (61%), Positives = 46/71 (64%)
Frame = -3 / -2
Query: 545 ETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSM 366
+TTAASLISGCVMR ASSSAGGTW PLYL+ PVCS PSLSM
Sbjct: 213 DTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMKISSSSST*PMSPVCSQPSLSM 34
Query: 365 VFFVASGSFR* 333
VFFV S SFR*
Sbjct: 33 VFFVDSRSFR* 1
Score = 81.7 bits (172), Expect(3) = 4e-022
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = -2 / -1
Query: 546 RDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLIN 367
R + G+LD R+ DE+ +L RR+LE LV D LL+PV+DEDL VQP+VL++
Sbjct: 214 RHDGGVLDLRVRDEERLELGRRHLEPLVLDDLLEPVDDEDLVVVVDIADVAGVQPAVLVD 35
Query: 366 GVLCRLWIIQI 334
GVLCRL ++Q+
Sbjct: 34 GVLCRLKVVQV 2
Score = 79.4 bits (167), Expect(3) = 2e-072
Identities = 32/41 (78%), Positives = 38/41 (92%)
Frame = +1 / +2
Query: 637 VAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 759
V +VVFYK+I++VFFT+SIPKNPSGKILRKDLRARLA G+
Sbjct: 575 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLARGV 697
Score = 70.7 bits (148), Expect(3) = 2e-072
Identities = 27/35 (77%), Positives = 35/35 (100%)
Frame = +1 / +2
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEV 651
MKD++AGE+PVAFI+R+EGSE++E+EIKQFVAKEV
Sbjct: 311 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 415
Score = 57.0 bits (118), Expect(3) = 1e-036
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3 / -2
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFI 546
S ATNCLIS S+ SEPS+R M ATG SPA SSFI
Sbjct: 411 SLATNCLISSSVTSEPSVRTMKATGISPARSSFI 310
Score = 47.3 bits (97), Expect(3) = 1e-036
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = -3 / -2
Query: 755 PAASRALRSFLRILPEGFFGIESVKK 678
P AS AL+SFLRILP+GF G++SVKK
Sbjct: 693 PRASLALKSFLRILPDGFLGMDSVKK 616
Score = 43.2 bits (88), Expect(3) = 4e-022
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = -2 / -1
Query: 750 GKPRSQVLPKNLAGGILRDRIREENSVDPLVEH 652
G+P SQVLP +LAG +L D EEN VD LVE+
Sbjct: 688 GEPGSQVLP*DLAGRVLGDGFSEENLVDLLVEN 590
Score = 23.5 bits (45), Expect(3) = 4e-022
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -2 / -1
Query: 606 RAFTAYNECHRDFAGDFIFHRD 541
RAF ++E RDF I H +
Sbjct: 370 RAFGPHDEGDRDFTSKIILHSE 305
>gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 268 bits (579), Expect = 1e-070
Identities = 110/125 (88%), Positives = 124/125 (99%)
Frame = +1 / +3
Query: 385 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVA 564
LHTGDIGYVDDDDEIFIVDRLKEIIKYKG QVPPAELEALLITHPEIKDAAVVSMKD++A
Sbjct: 3 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGLQVPPAELEALLITHPEIKDAAVVSMKDDLA 182
Query: 565 GEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRAR 744
GE+PVAFI+R+EGSE++E+EIKQFVAKEVVFYK+I++VFF++SIPKNPSGKILRKDLRAR
Sbjct: 183 GEIPVAFIVRTEGSEVTEDEIKQFVAKEVVFYKKIHKVFFSESIPKNPSGKILRKDLRAR 362
Query: 745 LAAGI 759
LAAG+
Sbjct: 363 LAAGV 377
Score = 152 bits (327), Expect = 8e-036
Identities = 74/124 (59%), Positives = 82/124 (66%)
Frame = -3 / -3
Query: 755 PAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNAT 576
PAAS AL+SFLRILP+GF G++S KK TS ATNCLIS S+ SEPS+R M AT
Sbjct: 373 PAASLALKSFLRILPDGFLGMDSEKKTLWIFL*KTTSLATNCLISSSVTSEPSVRTMKAT 194
Query: 575 GTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXX 396
G SPA SSFI+TTAASLISGCVMR ASSSAGGT PLYL+
Sbjct: 193 GISPARSSFIDTTAASLISGCVMRSASSSAGGTCNPLYLMISLSLSTMKISSSSST*PMS 14
Query: 395 PVCS 384
PVCS
Sbjct: 13 PVCS 2
Score = 103 bits (219), Expect = 6e-021
Identities = 51/109 (46%), Positives = 65/109 (59%)
Frame = -2 / -2
Query: 750 GKPRSQVLPKNLAGGILRDRIREENSVDPLVEHXXXXXXXXXXXXXXLRAFTAYNECHRD 571
G+P SQVLP +LAG +L D REEN VD LVE+ RAF ++E RD
Sbjct: 368 GEPGSQVLP*DLAGRVLGDGFREENLVDLLVENHLLGDKLLDLILGDFRAFGPHDEGDRD 189
Query: 570 FAGDFIFHRDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDL 424
F I H + G+LD R+ DE+ +L RR+L LV D LL+PV+DEDL
Sbjct: 188 FTSKIILH*HDGGVLDLRVRDEERLELGRRHL*PLVLDDLLEPVDDEDL 42
>gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284g08, DNA
sequence
Length = 724
Score = 121 bits (259), Expect(3) = 3e-069
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1 / -2
Query: 394 GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 546
GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 723 GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 571
Score = 106 bits (226), Expect(3) = 3e-069
Identities = 45/45 (100%), Positives = 45/45 (100%)
Frame = +1 / -2
Query: 649 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDNTQS 783
VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDNTQS
Sbjct: 135 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDNTQS 1
Score = 101 bits (215), Expect(3) = 1e-054
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = -1 / +3
Query: 781 TVCCHCSGCPRQAALSGPS*ESCRRDSSG*NP*RKLC*SSCRTRP 647
TVCCHCS CP+QAALSGPS*ESCRRDSS NP*RKLC*SSCRTRP
Sbjct: 3 TVCCHCSECPQQAALSGPS*ESCRRDSSEWNP*RKLC*SSCRTRP 137
Score = 97.3 bits (206), Expect(3) = 3e-044
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +3 / -1
Query: 648 GRVLQEDQQSFLHGFYPEESLRQDS*EGPESAACRGHPEQ*QHTV 782
GRVLQEDQQSFLHGF+ EESLRQDS*EGPESAAC GH EQ*QHTV
Sbjct: 136 GRVLQEDQQSFLHGFHSEESLRQDS*EGPESAACCGHSEQ*QHTV 2
Score = 95.5 bits (202), Expect(3) = 1e-041
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = -2 / +1
Query: 783 GLCVVTARDARGKPRSQVLPKNLAGGILRDRIREENSVDPLVEH 652
GLCVVTAR+AR KPRSQVLPKNLAGGILR+ IREENSVDPLVEH
Sbjct: 1 GLCVVTARNARSKPRSQVLPKNLAGGILRNGIREENSVDPLVEH 132
Score = 81.3 bits (171), Expect(3) = 2e-030
Identities = 37/60 (61%), Positives = 42/60 (70%)
Frame = -3 / +2
Query: 782 DCVLSLLGMPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISE 603
DCVLSLLGMPAASRALRSFLRILPEGFFG+ESVKK T + +I + L +
Sbjct: 2 DCVLSLLGMPAASRALRSFLRILPEGFFGMESVKKTLLILL*NTTYYIVETVIRYGLFGK 181
Score = 79.9 bits (168), Expect(3) = 1e-054
Identities = 32/41 (78%), Positives = 36/41 (87%)
Frame = -2 / +1
Query: 546 RDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDL 424
RDN IL+FRMC+EKG K RRRYLEALVFDYLL+PVN+E L
Sbjct: 571 RDNCSILNFRMCNEKGLKFRRRYLEALVFDYLLEPVNNEYL 693
Score = 79.9 bits (168), Expect(3) = 3e-069
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1 / -1
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVV 654
MKDE+AGEVPVAFIIRSEGSEISENEIKQFVAKEV+
Sbjct: 466 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 359
Score = 77.1 bits (162), Expect(3) = 1e-054
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -3 / +3
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFI 546
SFATNCLISFSLISEPSLRIMNATGTSPA+SSFI
Sbjct: 366 SFATNCLISFSLISEPSLRIMNATGTSPASSSFI 467
Score = 76.7 bits (161), Expect(3) = 2e-022
Identities = 35/39 (89%), Positives = 35/39 (89%)
Frame = +2 / -3
Query: 665 GSTEFSSRILSRRIPPARFLGRT*ERGLPRASRAVTTHS 781
GSTEFSSRI RRIPPARFLGRT*ERGL RA RAVTTHS
Sbjct: 119 GSTEFSSRIPFRRIPPARFLGRT*ERGLLRAFRAVTTHS 3
Score = 72.5 bits (152), Expect(3) = 1e-041
Identities = 30/30 (100%), Positives = 30/30 (100%)
Frame = -3 / +2
Query: 545 ETTAASLISGCVMRRASSSAGGTWKPLYLI 456
ETTAASLISGCVMRRASSSAGGTWKPLYLI
Sbjct: 572 ETTAASLISGCVMRRASSSAGGTWKPLYLI 661
Score = 69.8 bits (146), Expect(3) = 3e-044
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +3 / -1
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCL 545
QA+GDNQIQGLPSTSCG * PSH+TS*N GC CL
Sbjct: 676 QAQGDNQIQGLPSTSCGT*GPSHYTS*N*GCCSCL 572
Score = 56.5 bits (117), Expect(3) = 3e-044
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +3 / -3
Query: 546 DER*SRRRSPGGIHYTQ*RL*DQ*ERDQAVCCKGG 650
+ER*+ RSP IHYT+*RL*D *ERDQ VCCKGG
Sbjct: 467 NER*TCWRSPCCIHYTE*RL*D**ERDQTVCCKGG 363
Score = 50.6 bits (104), Expect(3) = 2e-030
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1 / +3
Query: 529 P*FQDV**EGLQAPQEVLGSPCI*L 455
P*FQDV**EG Q PQEVLGSPCI*L
Sbjct: 588 P*FQDV**EGPQVPQEVLGSPCI*L 662
Score = 46.4 bits (95), Expect(3) = 1e-041
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1 / +1
Query: 649 PPLQQTA*SRSH*SQSLHCV**MPPG 572
PPLQQT *SRSH*SQSLH V**M G
Sbjct: 364 PPLQQTV*SRSH*SQSLHSV**MQQG 441
Score = 45.1 bits (92), Expect(3) = 2e-022
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +2 / -3
Query: 470 ASKYLLRSLKPFSSHILKSRMPLLSR 547
ASKYLLR+L+PFS HILK RM LSR
Sbjct: 647 ASKYLLRNLRPFSLHILKLRMLQLSR 570
Score = 44.6 bits (91), Expect(3) = 2e-030
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / +2
Query: 606 RAFTAYNECHRDFAGDFIFH 547
RAFT YNEC+RDFA FIFH
Sbjct: 407 RAFTPYNECNRDFASKFIFH 466
Score = 27.6 bits (54), Expect(3) = 2e-022
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2 / -2
Query: 539 LSR*KMKSPAKSRWHSLYAVKA 604
++ *KM AKS HSLY VKA
Sbjct: 474 IAE*KMNLLAKSLLHSLYGVKA 409
>gb|CW380206.1|CW380206 fsbb001f059o07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059o07, DNA
sequence
Length = 683
Score = 139 bits (298), Expect(3) = 1e-068
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = +1 / -1
Query: 130 QGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICI 309
QGYGMTEAGPVL+MC AFAKEP K GSCGTVVRNAELK+VDPDT SLGRN PGEICI
Sbjct: 659 QGYGMTEAGPVLSMCPAFAKEPTPAKPGSCGTVVRNAELKVVDPDTGLSLGRNLPGEICI 480
Query: 310 RGEQIMKG 333
RG QIMKG
Sbjct: 479 RGPQIMKG 456
Score = 114 bits (243), Expect(3) = 1e-068
Identities = 43/50 (86%), Positives = 47/50 (94%)
Frame = +1 / -1
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV 480
GYLNDPEAT TID DGWLHTGDIGYVDDDDE+FIVDR+KE+IK+KGFQV
Sbjct: 344 GYLNDPEATARTIDVDGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQV 195
Score = 106 bits (227), Expect(3) = 2e-033
Identities = 46/67 (68%), Positives = 48/67 (71%)
Frame = -3 / +1
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PFMIC PRM ISPG RP + VSGST SSA TTVP +P L GSLA A HM STGP
Sbjct: 457 PFMICGPRMQISPGRLRPRERPVSGSTTLSSALRTTVPHDPGLAGVGSLANAGHMDSTGP 636
Query: 152 ASVIPYP 132
ASVIPYP
Sbjct: 637 ASVIPYP 657
Score = 47.3 bits (97), Expect(3) = 1e-068
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = +1 / -3
Query: 475 QVPPAELEALLITHPEIKDAAVV 543
QVPPAELEALLI HP I DAAVV
Sbjct: 87 QVPPAELEALLIAHPSIADAAVV 19
Score = 40.0 bits (81), Expect(3) = 2e-033
Identities = 21/50 (42%), Positives = 23/50 (46%)
Frame = -3 / +1
Query: 479 TWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMVFFVASGSFR*P 330
TWKPL L+ PV S PS S+V VASGSFR P
Sbjct: 196 TWKPLNLMSSLTRSTMKTSSSSST*PMSPVWSQPSTSIVLAVASGSFRYP 345
Score = 35.9 bits (72), Expect(3) = 2e-033
Identities = 16/22 (72%), Positives = 17/22 (77%)
Frame = -3 / +2
Query: 542 TTAASLISGCVMRRASSSAGGT 477
TTAAS + G M RASSSAGGT
Sbjct: 20 TTAASAMDGWAMSRASSSAGGT 85
>gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 3', mRNA sequence
Length = 652
Score = 167 bits (360), Expect(2) = 3e-065
Identities = 67/83 (80%), Positives = 75/83 (90%)
Frame = +1 / +2
Query: 310 RGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPA 489
RG+QIMKGYLN+P+ATKN+ID DGWLHTGD+G+VDDDDEIFIVDRLKEIIKYKG QV PA
Sbjct: 2 RGQQIMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPA 181
Query: 490 ELEALLITHPEIKDAAVVSMKDE 558
E+EALLITHP I DAAVV + E
Sbjct: 182 EIEALLITHPSIADAAVVGKQVE 250
Score = 103 bits (219), Expect(2) = 3e-065
Identities = 40/72 (55%), Positives = 56/72 (77%)
Frame = +1 / +2
Query: 532 AAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPS 711
A V + GE+PVAF+ +++GSE+SE+++KQFVAKEV++YK++ V F D IPK PS
Sbjct: 227 AVVGKQVEPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPS 406
Query: 712 GKILRKDLRARL 747
GKILRK+LR +L
Sbjct: 407 GKILRKELRKQL 442
Score = 73.9 bits (155), Expect(2) = 6e-021
Identities = 35/77 (45%), Positives = 49/77 (63%)
Frame = -2 / -1
Query: 543 DNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLING 364
D+SGI D + DE+G L R +LE LV LL+PV+DEDL VQP+V ++
Sbjct: 235 DDSGIGDAWVGDEQGLYLCRGHLETLVLYDLLKPVDDEDLVVVVHKADVAGVQPTVSVDA 56
Query: 363 VLCRLWIIQITFHDLFA 313
+L R+ ++Q+TFHDL A
Sbjct: 55 ILRRIRVVQVTFHDLLA 5
Score = 48.7 bits (100), Expect(2) = 6e-021
Identities = 30/70 (42%), Positives = 34/70 (48%)
Frame = -3 / -2
Query: 737 LRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGTSPAT 558
L S ILP+G GI S+K TS ATNCL S SL S P ATG SP +
Sbjct: 432 LSSLRNILPDGALGILSMKITSRTFL**ITSLATNCLTSSSLSSLPLALATKATGISPIS 253
Query: 557 SSFIETTAAS 528
S T A+
Sbjct: 252 GSTCFPTTAA 223
>gb|CW157694.1|CW157694 104_561_11147661_116_36391_093 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11147661, DNA
sequence
Length = 611
Score = 203 bits (438), Expect(2) = 3e-064
Identities = 83/109 (76%), Positives = 95/109 (87%)
Frame = +1 / -2
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS + DL+S+RMV+SGAAPMG++LQD AK+P AVLGQGYGMTEAGPVL+MC+AFA
Sbjct: 538 KSDAMDRHDLSSVRMVISGAAPMGRELQDXLRAKLPGAVLGQGYGMTEAGPVLSMCMAFA 359
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKG 333
KEP VKSG+CGTVVRNAELKIVDPDT SL RNQPGEICIRG+Q+MKG
Sbjct: 358 KEPLPVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 212
Score = 162 bits (348), Expect = 1e-038
Identities = 72/109 (66%), Positives = 77/109 (70%)
Frame = -3 / +3
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PF+ C P M ISPGW R D+ VSGSTI SSAFLTTVPQ PD T NGS A A H+ STGP
Sbjct: 213 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 392
Query: 152 ASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
ASVIPYP PSTA G LA + S S PMGAAP+MTMR E RS LL
Sbjct: 393 ASVIPYPCPSTAPGSLARSXSCSSLPMGAAPEMTMRTEERSWRSMASLL 539
Score = 66.6 bits (139), Expect(2) = 3e-064
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +1 / -3
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDD 417
GYLN+PEAT TID +GWLHTGDIGYVDD
Sbjct: 87 GYLNNPEATAKTIDDEGWLHTGDIGYVDD 1
>gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 650
Score = 137 bits (294), Expect(2) = 2e-061
Identities = 55/66 (83%), Positives = 59/66 (89%)
Frame = +1 / -1
Query: 346 PEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEI 525
PEAT TID +GWLHTGD+GYVDDDDEIFIVDRLKE+IKYKGFQV PAELEA+LI HP I
Sbjct: 635 PEATAKTIDDEGWLHTGDMGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSI 456
Query: 526 KDAAVV 543
DAAVV
Sbjct: 455 ADAAVV 438
Score = 121 bits (258), Expect(2) = 2e-061
Identities = 47/76 (61%), Positives = 65/76 (85%)
Frame = +1 / -3
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILR 726
MKD+ GE+PVAF++ S G E++E+EIKQ+VAK+VVFYKR+++VFF ++IPK PSGKILR
Sbjct: 324 MKDDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILR 145
Query: 727 KDLRARLAAGIPSSDN 774
KDLRA+LA+G + +
Sbjct: 144 KDLRAKLASGFSNGSS 97
Score = 76.2 bits (160), Expect(2) = 2e-028
Identities = 41/70 (58%), Positives = 43/70 (61%)
Frame = -3 / +2
Query: 755 PAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNAT 576
P AS ALRSFLRILP+G GI S KK T FAT CLIS S+IS P NAT
Sbjct: 116 PDASFALRSFLRILPDGALGIASTKKTLCSLL*NTTCFATYCLISSSVIS*PPDVTTNAT 295
Query: 575 GTSPATSSFI 546
G SP SSFI
Sbjct: 296 GISPQESSFI 325
Score = 71.6 bits (150), Expect(2) = 2e-028
Identities = 34/66 (51%), Positives = 36/66 (54%)
Frame = -3 / +1
Query: 542 TTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSMV 363
TTAAS + G M ASSSAG TW PLYL+ PVCSHPS SMV
Sbjct: 439 TTAASAMLGWAMSMASSSAGATWNPLYLMSSLSLSTMKISSSSSTYPMSPVCSHPSSSMV 618
Query: 362 FFVASG 345
F VASG
Sbjct: 619 FAVASG 636
>gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 759
Score = 177 bits (380), Expect(2) = 5e-061
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +1 / -3
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI
Sbjct: 568 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 389
Query: 511 THPEIKDAAVVS 546
THPEIKDAAVVS
Sbjct: 388 THPEIKDAAVVS 353
Score = 117 bits (251), Expect(2) = 2e-042
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = -2 / +2
Query: 546 RDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLIN 367
RDN IL+FRMC+EKG K RRRYLEALVFDYLL+PVN+E L VQPS+LIN
Sbjct: 353 RDNCSILNFRMCNEKGLKFRRRYLEALVFDYLLEPVNNEYLIVIVHITNVPSVQPSILIN 532
Query: 366 GVLCRLWIIQIT 331
GVLCR WIIQIT
Sbjct: 533 GVLCRFWIIQIT 568
Score = 114 bits (243), Expect(2) = 1e-031
Identities = 52/72 (72%), Positives = 52/72 (72%)
Frame = -3 / +3
Query: 545 ETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSM 366
ETTAASLISGCVMRRASSSAGGTWKPLYLI PVCSHPSLSM
Sbjct: 354 ETTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTMNISSSSST*PMSPVCSHPSLSM 533
Query: 365 VFFVASGSFR*P 330
VFFVASGSFR*P
Sbjct: 534 VFFVASGSFR*P 569
Score = 79.9 bits (168), Expect(2) = 5e-061
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1 / -2
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVV 654
MKDE+AGEVPVAFIIRSEGSEISENEIKQFVAKEV+
Sbjct: 248 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 141
Score = 77.1 bits (162), Expect(2) = 2e-042
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -3 / +1
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFI 546
SFATNCLISFSLISEPSLRIMNATGTSPA+SSFI
Sbjct: 148 SFATNCLISFSLISEPSLRIMNATGTSPASSSFI 249
Score = 69.8 bits (146), Expect(3) = 2e-029
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +3 / -2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCL 545
QA+GDNQIQGLPSTSCG * PSH+TS*N GC CL
Sbjct: 458 QAQGDNQIQGLPSTSCGT*GPSHYTS*N*GCCSCL 354
Score = 56.5 bits (117), Expect(3) = 2e-029
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +3 / -1
Query: 546 DER*SRRRSPGGIHYTQ*RL*DQ*ERDQAVCCKGG 650
+ER*+ RSP IHYT+*RL*D *ERDQ VCCKGG
Sbjct: 249 NER*TCWRSPCCIHYTE*RL*D**ERDQTVCCKGG 145
Score = 50.6 bits (104), Expect(3) = 5e-021
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1 / +1
Query: 529 P*FQDV**EGLQAPQEVLGSPCI*L 455
P*FQDV**EG Q PQEVLGSPCI*L
Sbjct: 370 P*FQDV**EGPQVPQEVLGSPCI*L 444
Score = 47.8 bits (98), Expect(3) = 5e-021
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1 / +1
Query: 388 AAIRPYQWCSLSPLDHSDNL 329
AAI PYQWCSLS LDHSDNL
Sbjct: 511 AAIHPYQWCSLSLLDHSDNL 570
Score = 46.4 bits (95), Expect(3) = 5e-021
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1 / +2
Query: 649 PPLQQTA*SRSH*SQSLHCV**MPPG 572
PPLQQT *SRSH*SQSLH V**M G
Sbjct: 146 PPLQQTV*SRSH*SQSLHSV**MQQG 223
Score = 44.6 bits (91), Expect(2) = 1e-031
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / +3
Query: 606 RAFTAYNECHRDFAGDFIFH 547
RAFT YNEC+RDFA FIFH
Sbjct: 189 RAFTPYNECNRDFASKFIFH 248
Score = 42.3 bits (86), Expect(3) = 2e-029
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2 / -1
Query: 329 KVI*MIQRRQRTPLIRTDGC 388
+VI*MIQ+RQRTPLIR DGC
Sbjct: 570 QVI*MIQKRQRTPLIRMDGC 511
>gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 694
Score = 177 bits (380), Expect(2) = 5e-061
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +1 / +3
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI
Sbjct: 111 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 290
Query: 511 THPEIKDAAVVS 546
THPEIKDAAVVS
Sbjct: 291 THPEIKDAAVVS 326
Score = 117 bits (251), Expect(2) = 2e-042
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = -2 / -3
Query: 546 RDNSGILDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLIN 367
RDN IL+FRMC+EKG K RRRYLEALVFDYLL+PVN+E L VQPS+LIN
Sbjct: 326 RDNCSILNFRMCNEKGLKFRRRYLEALVFDYLLEPVNNEYLIVIVHITNVPSVQPSILIN 147
Query: 366 GVLCRLWIIQIT 331
GVLCR WIIQIT
Sbjct: 146 GVLCRFWIIQIT 111
Score = 114 bits (243), Expect(2) = 1e-031
Identities = 52/72 (72%), Positives = 52/72 (72%)
Frame = -3 / -1
Query: 545 ETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSM 366
ETTAASLISGCVMRRASSSAGGTWKPLYLI PVCSHPSLSM
Sbjct: 325 ETTAASLISGCVMRRASSSAGGTWKPLYLIISLSLSTMNISSSSST*PMSPVCSHPSLSM 146
Query: 365 VFFVASGSFR*P 330
VFFVASGSFR*P
Sbjct: 145 VFFVASGSFR*P 110
Score = 79.9 bits (168), Expect(2) = 5e-061
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1 / +2
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVV 654
MKDE+AGEVPVAFIIRSEGSEISENEIKQFVAKEV+
Sbjct: 431 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 538
Score = 77.1 bits (162), Expect(2) = 2e-042
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -3 / -2
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFI 546
SFATNCLISFSLISEPSLRIMNATGTSPA+SSFI
Sbjct: 531 SFATNCLISFSLISEPSLRIMNATGTSPASSSFI 430
Score = 69.8 bits (146), Expect(3) = 2e-029
Identities = 28/35 (80%), Positives = 30/35 (85%)
Frame = +3 / +2
Query: 441 QAEGDNQIQGLPSTSCGA*SPSHHTS*NQGCRCCL 545
QA+GDNQIQGLPSTSCG * PSH+TS*N GC CL
Sbjct: 221 QAQGDNQIQGLPSTSCGT*GPSHYTS*N*GCCSCL 325
Score = 56.5 bits (117), Expect(3) = 2e-029
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +3 / +1
Query: 546 DER*SRRRSPGGIHYTQ*RL*DQ*ERDQAVCCKGG 650
+ER*+ RSP IHYT+*RL*D *ERDQ VCCKGG
Sbjct: 430 NER*TCWRSPCCIHYTE*RL*D**ERDQTVCCKGG 534
Score = 50.6 bits (104), Expect(3) = 4e-021
Identities = 23/25 (92%), Positives = 23/25 (92%)
Frame = -1 / -2
Query: 529 P*FQDV**EGLQAPQEVLGSPCI*L 455
P*FQDV**EG Q PQEVLGSPCI*L
Sbjct: 309 P*FQDV**EGPQVPQEVLGSPCI*L 235
Score = 47.8 bits (98), Expect(3) = 4e-021
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = -1 / -2
Query: 388 AAIRPYQWCSLSPLDHSDNL 329
AAI PYQWCSLS LDHSDNL
Sbjct: 168 AAIHPYQWCSLSLLDHSDNL 109
Score = 46.4 bits (95), Expect(3) = 4e-021
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1 / -3
Query: 649 PPLQQTA*SRSH*SQSLHCV**MPPG 572
PPLQQT *SRSH*SQSLH V**M G
Sbjct: 533 PPLQQTV*SRSH*SQSLHSV**MQQG 456
Score = 44.6 bits (91), Expect(2) = 1e-031
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / -1
Query: 606 RAFTAYNECHRDFAGDFIFH 547
RAFT YNEC+RDFA FIFH
Sbjct: 490 RAFTPYNECNRDFASKFIFH 431
Score = 42.3 bits (86), Expect(3) = 2e-029
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = +2 / +1
Query: 329 KVI*MIQRRQRTPLIRTDGC 388
+VI*MIQ+RQRTPLIR DGC
Sbjct: 109 QVI*MIQKRQRTPLIRMDGC 168
>gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 767
Score = 182 bits (391), Expect(2) = 7e-060
Identities = 68/112 (60%), Positives = 89/112 (79%)
Frame = +1 / +3
Query: 205 KSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGW 384
K S G ++ N E+K VDPDT SL +N PGEIC+R + +M+GY E T++TID GW
Sbjct: 123 KKKSVGFILPNLEVKFVDPDTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGW 302
Query: 385 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAV 540
LHTGD+GY+DDD ++FIVDR+KE+IKYKGFQV PAELEA+L++HP ++DAAV
Sbjct: 303 LHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 458
Score = 71.2 bits (149), Expect(2) = 7e-060
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +1 / +2
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILR 726
+ DE AGEVP + ++R G+ SE ++ +VA+ V YK++ + F D+IPK+ SGKILR
Sbjct: 542 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILR 721
Query: 727 KDLR 738
+ LR
Sbjct: 722 RQLR 733
>gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_H12_A012 3', mRNA sequence
Length = 559
Score = 227 bits (491), Expect = 2e-058
Identities = 94/107 (87%), Positives = 106/107 (99%)
Frame = +1 / +2
Query: 439 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISE 618
DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKD++AGE+PVAFI+R+EGSE++E
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 619 NEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 759
EIKQFVAKEVVFYK+I++VFFT+SIPKNPSGKILRKDLRARLAAG+
Sbjct: 182 GEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 322
Score = 159 bits (342), Expect = 7e-038
Identities = 72/100 (72%), Positives = 80/100 (80%)
Frame = -3 / -2
Query: 755 PAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNAT 576
PAAS AL+SFLRILP+GF G++SVKK TS ATNCLIS S+ SEPS+R M AT
Sbjct: 318 PAASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISPSVTSEPSVRTMKAT 139
Query: 575 GTSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLI 456
G SPA SSFI+TTAASLISGCVMR ASSSAGGTW PLYL+
Sbjct: 138 GISPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLM 19
>gb|CN143608.1|CN143608 WOUND1_17_G06.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_17_G06_A002 3', mRNA sequence
Length = 478
Score = 190 bits (410), Expect(4) = 6e-058
Identities = 85/95 (89%), Positives = 89/95 (93%)
Frame = +1 / +1
Query: 523 IKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPK 702
IKDAAVVSMKDE+AGEVPVAFIIRSEGSEISENEIK FVAKEVVF KRINRVFFTDSIPK
Sbjct: 1 IKDAAVVSMKDELAGEVPVAFIIRSEGSEISENEIKHFVAKEVVFSKRINRVFFTDSIPK 180
Query: 703 NPSGKILRKDLRARLAAGIPSSDNTQSKS*YVLSY 807
NPSGKI RKDLRARLAA IPSSDNTQSKS* +++
Sbjct: 181 NPSGKIFRKDLRARLAAAIPSSDNTQSKS*CFVTF 285
Score = 156 bits (336), Expect(4) = 2e-048
Identities = 73/88 (82%), Positives = 76/88 (86%)
Frame = -3 / -3
Query: 788 LLDCVLSLLGMPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLI 609
LLD VLSLLGM AASRALRSFL+ILPEGFFG+ESVKK TSFAT CLISFSLI
Sbjct: 266 LLDWVLSLLGMAAASRALRSFLKILPEGFFGMESVKKTLLILLENTTSFATKCLISFSLI 87
Query: 608 SEPSLRIMNATGTSPATSSFIETTAASL 525
SEPSLRIMNATGTSPA+SSFIETTAASL
Sbjct: 86 SEPSLRIMNATGTSPASSSFIETTAASL 3
Score = 156 bits (336), Expect(3) = 7e-045
Identities = 71/98 (72%), Positives = 77/98 (78%)
Frame = +3 / +3
Query: 528 GCRCCLDER*SRRRSPGGIHYTQ*RL*DQ*ERDQAVCCKGGRVLQEDQQSFLHGFYPEES 707
GC CL+ER*+ SP IHYT+*RL*D *ERDQ CCKGGRVLQEDQQSFLHGF+ EES
Sbjct: 6 GCCSCLNER*TCWGSPCCIHYTE*RL*D**ERDQTFCCKGGRVLQEDQQSFLHGFHSEES 185
Query: 708 LRQDS*EGPESAACRGHPEQ*QHTVQKLIRTFVLFFSS 821
LRQD *EGPESAAC GH EQ*QH VQKL+ + F S
Sbjct: 186 LRQDF*EGPESAACCGHSEQ*QHPVQKLMFCYFSFLVS 299
Score = 136 bits (292), Expect(3) = 2e-039
Identities = 61/74 (82%), Positives = 63/74 (85%)
Frame = -1 / -1
Query: 793 INFWTVCCHCSGCPRQAALSGPS*ESCRRDSSG*NP*RKLC*SSCRTRPPLQQTA*SRSH 614
INFWT CCHCS P+QAALSGPS*+SCRRDSS NP*RKLC*SS RTRPPLQQ *SRSH
Sbjct: 271 INFWTGCCHCSEWPQQAALSGPS*KSCRRDSSEWNP*RKLC*SSWRTRPPLQQNV*SRSH 92
Query: 613 *SQSLHCV**MPPG 572
*SQSLH V**M G
Sbjct: 91 *SQSLHSV**MQQG 50
Score = 129 bits (277), Expect(3) = 8e-036
Identities = 59/89 (66%), Positives = 63/89 (70%)
Frame = -2 / -2
Query: 789 TFGLCVVTARDARGKPRSQVLPKNLAGGILRDRIREENSVDPLVEHXXXXXXXXXXXXXX 610
TFGL VVTAR+ R KPRSQVLPKNLAGGILR+ IREENSVDPL EH
Sbjct: 267 TFGLGVVTARNGRSKPRSQVLPKNLAGGILRNGIREENSVDPLGEHDLLCNKMFDLVLTN 88
Query: 609 LRAFTAYNECHRDFAGDFIFHRDNSGILD 523
LRAFT YNEC+RDF FIFH DN IL+
Sbjct: 87 LRAFTPYNECNRDFPSKFIFH*DNCSILN 1
Score = 77.6 bits (163), Expect(4) = 2e-024
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = +2 / +2
Query: 665 GSTEFSSRILSRRIPPARFLGRT*ERGLPRASRAVTTHSPKVD 793
GSTEFSSRI RRIPPARFLGRT*ERGL R RAVTT SPKV+
Sbjct: 143 GSTEFSSRIPFRRIPPARFLGRT*ERGLLRPFRAVTTPSPKVN 271
Score = 46.0 bits (94), Expect(4) = 2e-048
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = -1 / -1
Query: 916 PCPSRRIDNDRLAFLCIPLPSHE*STA*FLAQLEKNSTK 800
P PS+RI+ DRLAFL IPLPSHE* F +E K
Sbjct: 397 PYPSKRINIDRLAFLYIPLPSHE*EIMIFDKGVETRKEK 281
Score = 43.2 bits (88), Expect(4) = 6e-058
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +3 / +3
Query: 840 VLYS*DGNGIHKNAKRSLSILLDGQG 917
+ YS*DGNGI+K AKRS+ ILL+G G
Sbjct: 321 ISYS*DGNGIYKKAKRSILILLEG*G 398
Score = 42.8 bits (87), Expect(3) = 2e-039
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = -2 / -2
Query: 915 LAHLEESITTAWRFCVYHCHLMNR 844
L L+ESI+ AW F +YHCHLM+R
Sbjct: 396 LTPLKESISIAWPFYIYHCHLMSR 325
Score = 40.9 bits (83), Expect(3) = 7e-045
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +1 / +1
Query: 850 HEMAMVYTKTPSGRYRFF*MGKGKVYFVCVRHI 948
HEMAMVY K PS RY FF* GK C ++
Sbjct: 331 HEMAMVYIKRPSDRY*FF*RGKVYFVCFCPTYV 429
Score = 38.6 bits (78), Expect(3) = 8e-036
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = -3 / -3
Query: 914 LPI*KNR*RPLGVFVYTIAIS*I 846
LP+*KN+ R LG+F+YTIAIS*+
Sbjct: 395 LPL*KNQYRSLGLFIYTIAIS*V 327
Score = 37.3 bits (75), Expect(4) = 2e-024
Identities = 15/24 (62%), Positives = 16/24 (66%)
Frame = +2 / +2
Query: 845 LFMRWQWYTQKRQAVVIDSSRWAR 916
L MRWQWY K QA+ IDS R R
Sbjct: 326 LLMRWQWYI*KGQAIDIDSFRGVR 397
Score = 30.9 bits (61), Expect(4) = 2e-024
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +2 / +2
Query: 527 RMPLLSR*KMKSPAKSRWHSLYAVKA 604
RM LS+*KM KS HSLY VKA
Sbjct: 5 RMLQLSQ*KMNLLGKSLLHSLYGVKA 82
Score = 26.7 bits (52), Expect(4) = 6e-058
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +2 / +3
Query: 947 LCICIMYRY 973
+CICIMYRY
Sbjct: 423 ICICIMYRY 449
Score = 26.3 bits (51), Expect(4) = 2e-048
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 987 VVNKTYLYMIQIH 949
+++K YLYMIQIH
Sbjct: 463 LLSKRYLYMIQIH 425
Score = 23.5 bits (45), Expect(3) = 7e-045
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +1 / +2
Query: 949 MYLYHV*IRF 978
MYLYHV*I F
Sbjct: 425 MYLYHV*ISF 454
Score = 23.5 bits (45), Expect(3) = 2e-039
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 1004 HYN*HLLSTKRIY 966
HYN HLLS + +Y
Sbjct: 478 HYNQHLLSKRYLY 440
Score = 23.1 bits (44), Expect(4) = 2e-024
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3 / +1
Query: 948 YVFVSCID 971
YVFVSCID
Sbjct: 424 YVFVSCID 447
Score = 22.6 bits (43), Expect(4) = 6e-058
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +1 / +1
Query: 913 KGKVYFVC 936
+GKVYFVC
Sbjct: 388 RGKVYFVC 411
Score = 22.1 bits (42), Expect(4) = 2e-048
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -3 / -3
Query: 935 QTKYTLPL 912
QTKYTLPL
Sbjct: 410 QTKYTLPL 387
Score = 22.1 bits (42), Expect(3) = 8e-036
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 1003 IIISTCCQQNV 971
IIIS CCQ ++
Sbjct: 477 IIISICCQNDI 445
>gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 668
Score = 174 bits (374), Expect(2) = 1e-057
Identities = 64/100 (64%), Positives = 83/100 (83%)
Frame = +1 / +2
Query: 241 ELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDD 420
E+K VDPDT SL +N PGEIC+R + +M+GY E T++TID GWLHTGD+GY+DDD
Sbjct: 2 EVKFVDPDTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGWLHTGDVGYIDDD 181
Query: 421 DEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAV 540
++FIVDR+KE+IKYKGFQV PAELEA+L++HP ++DAAV
Sbjct: 182 GDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 301
Score = 71.2 bits (149), Expect(2) = 1e-057
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +1 / +1
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILR 726
+ DE AGEVP + ++R G+ SE ++ +VA+ V YK++ + F D+IPK+ SGKILR
Sbjct: 385 LPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILR 564
Query: 727 KDLR 738
+ LR
Sbjct: 565 RQLR 576
>gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 3', mRNA sequence
Length = 591
Score = 222 bits (479), Expect = 8e-057
Identities = 92/104 (88%), Positives = 104/104 (100%)
Frame = +1 / +2
Query: 439 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISE 618
DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKD++AGE+PVAFI+R+EGSE++E
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 619 NEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLA 750
+EIKQFVAKEVVFYK+I++VFFT+SIPKNPSGKILRKDLRARLA
Sbjct: 182 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLA 313
Score = 155 bits (333), Expect = 1e-036
Identities = 70/98 (71%), Positives = 78/98 (79%)
Frame = -3 / -1
Query: 749 ASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATGT 570
AS AL+SFLRILP+GF G++SVKK TS ATNCLIS S+ SEPS+R M ATG
Sbjct: 312 ASLALKSFLRILPDGFLGMDSVKKTLWIFL*KTTSLATNCLISSSVTSEPSVRTMKATGI 133
Query: 569 SPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLI 456
SPA SSFI+TTAASLISGCVMR ASSSAGGTW PLYL+
Sbjct: 132 SPARSSFIDTTAASLISGCVMRSASSSAGGTWNPLYLM 19
>gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117099, DNA
sequence
Length = 664
Score = 171 bits (367), Expect(2) = 2e-056
Identities = 70/72 (97%), Positives = 71/72 (98%)
Frame = +1 / -1
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLND E+TKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI
Sbjct: 544 GYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 365
Query: 511 THPEIKDAAVVS 546
THPEIKDAAVVS
Sbjct: 364 THPEIKDAAVVS 329
Score = 96.4 bits (204), Expect(2) = 4e-030
Identities = 45/72 (62%), Positives = 47/72 (65%)
Frame = -3 / +3
Query: 545 ETTAASLISGCVMRRASSSAGGTWKPLYLIXXXXXXXXXXXXXXXXXXXXPVCSHPSLSM 366
+TTAASLISGCVMR ASSSAGGTW PLYL+ PVCS PSLSM
Sbjct: 330 DTTAASLISGCVMRSASSSAGGTWNPLYLMISLSLSTMKISSSSST*PMSPVCSQPSLSM 509
Query: 365 VFFVASGSFR*P 330
VFFV S SFR*P
Sbjct: 510 VFFVDSRSFR*P 545
Score = 70.7 bits (148), Expect(2) = 2e-056
Identities = 27/35 (77%), Positives = 35/35 (100%)
Frame = +1 / -1
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEV 651
MKD++AGE+PVAFI+R+EGSE++E+EIKQFVAKEV
Sbjct: 232 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 128
Score = 57.0 bits (118), Expect(2) = 4e-030
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -3 / +3
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFI 546
S ATNCLIS S+ SEPS+R M ATG SPA SSFI
Sbjct: 132 SLATNCLISSSVTSEPSVRTMKATGISPARSSFI 233
>gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_H12_A002 3', mRNA sequence
Length = 759
Score = 216 bits (466), Expect = 5e-055
Identities = 83/143 (58%), Positives = 111/143 (77%)
Frame = +1 / +2
Query: 307 IRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPP 486
IRG +MKGY + EAT++T+ DGWL TGD+ Y+D+D +F+VDRLKE+IKYKG+QVPP
Sbjct: 2 IRGPYVMKGYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPP 181
Query: 487 AELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKR 666
AELEALL+TH EI+D AV+ D G+ P+A+++R +GS +SE E+ +FVAK+V YK+
Sbjct: 182 AELEALLLTHSEIQDVAVIPFPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQVAPYKK 361
Query: 667 INRVFFTDSIPKNPSGKILRKDL 735
+ +V F IPKN SGKILRKDL
Sbjct: 362 VRKVAFVTEIPKNASGKILRKDL 430
>gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779929, DNA
sequence
Length = 743
Score = 144 bits (309), Expect(3) = 4e-054
Identities = 57/68 (83%), Positives = 63/68 (92%)
Frame = +1 / +3
Query: 340 NDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHP 519
N+P+ATKN+ID DGWLHTGD+G+VDDDDEIFIVDRLKEIIKYKG QV PAE+EALLITHP
Sbjct: 3 NNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHP 182
Query: 520 EIKDAAVV 543
I DAAVV
Sbjct: 183 SIADAAVV 206
Score = 57.9 bits (120), Expect(3) = 4e-054
Identities = 20/31 (64%), Positives = 30/31 (96%)
Frame = +1 / +3
Query: 565 GEVPVAFIIRSEGSEISENEIKQFVAKEVVF 657
GE+PVAF+ +++GSE+SE+++KQFVAKEV+F
Sbjct: 348 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIF 440
Score = 54.7 bits (113), Expect(3) = 4e-054
Identities = 20/34 (58%), Positives = 27/34 (79%)
Frame = +1 / +3
Query: 646 EVVFYKRINRVFFTDSIPKNPSGKILRKDLRARL 747
+V++YK++ V F D IPK PSGKILRK+LR +L
Sbjct: 570 QVIYYKKVREVIFIDKIPKAPSGKILRKELRKQL 671
>gb|CW128047.1|CW128047 104_509_11113781_148_34748_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 628
Score = 203 bits (437), Expect = 5e-051
Identities = 83/109 (76%), Positives = 95/109 (87%)
Frame = +1 / +3
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS + DL+S+RMV+SGAAPMG++LQD AK+P AVLGQGYGMTEAGPVL+MC+AFA
Sbjct: 162 KSDAMDRHDLSSVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCMAFA 341
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKG 333
KEP VKSG+CGTVVRNAELKIVDPDT SL RNQPGEICIRG+Q+MKG
Sbjct: 342 KEPLPVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 488
Score = 161 bits (347), Expect = 1e-038
Identities = 72/109 (66%), Positives = 77/109 (70%)
Frame = -3 / -1
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PF+ C P M ISPGW R D+ VSGSTI SSAFLTTVPQ PD T NGS A A H+ STGP
Sbjct: 487 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGNGSFANAMHIESTGP 308
Query: 152 ASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
ASVIPYP PSTA G LA + S S PMGAAP+MTMR E RS LL
Sbjct: 307 ASVIPYPCPSTAPGSLARSRSCSSLPMGAAPEMTMRTEERSWRSMASLL 161
>gb|CW273595.1|CW273595 104_746_11403983_148_35368_094 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403983, DNA
sequence
Length = 523
Score = 201 bits (433), Expect = 2e-050
Identities = 83/109 (76%), Positives = 95/109 (87%)
Frame = +1 / -3
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS + DL+S+RMV+SGAAPMG++LQD AK+P AVLGQGYGMTEAGPVL+MC+AFA
Sbjct: 332 KSDAMDRHDLSSVRMVISGAAPMGRELQDLLRAKLPGAVLGQGYGMTEAGPVLSMCMAFA 153
Query: 187 KEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKG 333
KEP VKSG+CGTVVRNAELKIVDPDT SL RNQPGEICIRG+Q+MKG
Sbjct: 152 KEP*PVKSGACGTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 6
Score = 158 bits (339), Expect = 2e-037
Identities = 71/109 (65%), Positives = 76/109 (69%)
Frame = -3 / +1
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PF+ C P M ISPGW R D+ VSGSTI SSAFLTTVPQ PD T GS A A H+ STGP
Sbjct: 7 PFINCLPLMQISPGWLRRRDSPVSGSTILSSAFLTTVPQAPDFTGYGSFANAMHIESTGP 186
Query: 152 ASVIPYPWPSTALGILAMNASWRSFPMGAAPDMTMRMEARSAAPTRGLL 6
ASVIPYP PSTA G LA + S S PMGAAP+MTMR E RS LL
Sbjct: 187 ASVIPYPCPSTAPGSLARSKSCSSLPMGAAPEMTMRTEERSWRSMASLL 333
>gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 679
Score = 200 bits (432), Expect = 3e-050
Identities = 77/141 (54%), Positives = 108/141 (76%)
Frame = +1 / +1
Query: 316 EQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAEL 495
+ +M+GY E T++TID GWLHTGD+GY+DDD ++FIVDR+KE+IKYKGFQV PAEL
Sbjct: 4 QAVMQGYYRRKEETESTIDAAGWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAEL 183
Query: 496 EALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINR 675
EA+L++HP ++DAAV + DE AGEVP + ++R G+ SE ++ +VA+ V YK++
Sbjct: 184 EAILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRL 363
Query: 676 VFFTDSIPKNPSGKILRKDLR 738
+ F D+IPK+ SGKILR+ LR
Sbjct: 364 LRFVDAIPKSVSGKILRRQLR 426
>gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 3', mRNA sequence
Length = 632
Score = 164 bits (352), Expect(2) = 7e-050
Identities = 67/105 (63%), Positives = 81/105 (77%)
Frame = +1 / +3
Query: 277 LGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEI 456
LG + GE+ IRG Q+M GY N+PEAT+ TID DGWL TGDI Y D + +IVDRLKE+
Sbjct: 75 LGPMETGELYIRGPQVMAGYHNNPEATRETIDADGWLRTGDIAYYDREGYFYIVDRLKEL 254
Query: 457 IKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFII 591
IK KGFQV PAELEA+L+THP+I DAAV+ DE AGEVP AF++
Sbjct: 255 IKTKGFQVAPAELEAILLTHPKIADAAVIPSPDERAGEVPKAFVV 389
Score = 55.6 bits (115), Expect(2) = 7e-050
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +1 / +3
Query: 586 IIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRAR 744
+ + ++E E+ FVA +V +KR++ V F ++IPK SGKILR+DL+ R
Sbjct: 387 VAKPNAGPLAEAEVMDFVAGKVAHFKRLHFVEFVEAIPKTSSGKILRRDLKER 545
>gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 3', mRNA sequence
Length = 737
Score = 196 bits (423), Expect = 4e-049
Identities = 75/138 (54%), Positives = 107/138 (77%)
Frame = +1 / +1
Query: 322 IMKGYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEA 501
+MKGY+ D EAT T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QVPPAEL
Sbjct: 7 VMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELGH 186
Query: 502 LLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVF 681
+L +HP+I DAAV+ DE G++P+AFI+R GS +++ ++ FVAK+V YK++ RV
Sbjct: 187 ILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVA 366
Query: 682 FTDSIPKNPSGKILRKDL 735
F +IPK+P+GKILR++L
Sbjct: 367 FVSAIPKSPAGKILRREL 420
>gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488543, DNA
sequence
Length = 632
Score = 152 bits (326), Expect(2) = 3e-046
Identities = 60/71 (84%), Positives = 66/71 (92%)
Frame = +1 / +3
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLN+P+ATKN+ID DGWLHTGD+G+VDDDDEIFIVDRLKEIIKYKG QV PAE+EALLI
Sbjct: 15 GYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLI 194
Query: 511 THPEIKDAAVV 543
THP I DAAVV
Sbjct: 195 THPSIADAAVV 227
Score = 57.9 bits (120), Expect(2) = 3e-046
Identities = 20/31 (64%), Positives = 30/31 (96%)
Frame = +1 / +3
Query: 565 GEVPVAFIIRSEGSEISENEIKQFVAKEVVF 657
GE+PVAF+ +++GSE+SE+++KQFVAKEV+F
Sbjct: 369 GEIPVAFVAKAKGSELSEDDVKQFVAKEVIF 461
>gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 184 bits (397), Expect = 2e-045
Identities = 69/125 (55%), Positives = 100/125 (80%)
Frame = +1 / +1
Query: 373 KDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMK 552
K GWLHTGD+GY D+ ++ +VDRLKE+IKYKGFQ+ PAELE LL++HPEI DAAV+
Sbjct: 31 KQGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAAVIPYP 210
Query: 553 DEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKD 732
D AGEVP+A+++RS S ++E ++++F+ K+V YKR+ +V F DS+PK+ +GKILR++
Sbjct: 211 DPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVAHYKRLRKVKFVDSVPKSAAGKILRRE 390
Query: 733 LRARL 747
L A++
Sbjct: 391 LIAQV 405
>gb|CW331180.1|CW331180 104_828_11480770_116_36026_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 683
Score = 113 bits (242), Expect(3) = 1e-044
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -1 / +2
Query: 793 INFWTVCCHCSGCPRQAALSGPS*ESCRRDSSG*NP*RKLC*SSCRTRP 647
INFWTVCCHCS CP+QAALSGPS*ESCRRDSS NP*RKLC*SSCRTRP
Sbjct: 104 INFWTVCCHCSECPQQAALSGPS*ESCRRDSSEWNP*RKLC*SSCRTRP 250
Score = 111 bits (238), Expect(3) = 4e-045
Identities = 48/53 (90%), Positives = 51/53 (96%)
Frame = +1 / -1
Query: 649 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDNTQSKS*YVLSY 807
VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDNTQSKS* +++
Sbjct: 248 VVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGIPSSDNTQSKS*CFVTF 90
Score = 108 bits (230), Expect(3) = 1e-035
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +3 / -3
Query: 648 GRVLQEDQQSFLHGFYPEESLRQDS*EGPESAACRGHPEQ*QHTVQKLIRTFVLFFSSCA 827
GRVLQEDQQSFLHGF+ EESLRQDS*EGPESAAC GH EQ*QHTVQKL+ + F S
Sbjct: 249 GRVLQEDQQSFLHGFHSEESLRQDS*EGPESAACCGHSEQ*QHTVQKLMFCYFSFLVSTP 70
Query: 828 KNHAVLY 848
+ ++Y
Sbjct: 69 LSKIMIY 49
Score = 100 bits (213), Expect(3) = 6e-031
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = -2 / +3
Query: 789 TFGLCVVTARDARGKPRSQVLPKNLAGGILRDRIREENSVDPLVEH 652
TFGLCVVTAR+AR KPRSQVLPKNLAGGILR+ IREENSVDPLVEH
Sbjct: 108 TFGLCVVTARNARSKPRSQVLPKNLAGGILRNGIREENSVDPLVEH 245
Score = 84.9 bits (179), Expect(3) = 5e-025
Identities = 39/62 (62%), Positives = 44/62 (70%)
Frame = -3 / +1
Query: 788 LLDCVLSLLGMPAASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLI 609
LLDCVLSLLGMPAASRALRSFLRILPEGFFG+ESVKK T + +I + L
Sbjct: 109 LLDCVLSLLGMPAASRALRSFLRILPEGFFGMESVKKTLLILL*NTTYYIVETVIRYGLF 288
Query: 608 SE 603
+
Sbjct: 289 GK 294
Score = 79.9 bits (168), Expect(3) = 4e-045
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +1 / -3
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVV 654
MKDE+AGEVPVAFIIRSEGSEISENEIKQFVAKEV+
Sbjct: 579 MKDELAGEVPVAFIIRSEGSEISENEIKQFVAKEVI 472
Score = 77.1 bits (162), Expect(3) = 1e-044
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = -3 / +2
Query: 647 SFATNCLISFSLISEPSLRIMNATGTSPATSSFI 546
SFATNCLISFSLISEPSLRIMNATGTSPA+SSFI
Sbjct: 479 SFATNCLISFSLISEPSLRIMNATGTSPASSSFI 580
Score = 56.5 bits (117), Expect(3) = 1e-035
Identities = 26/35 (74%), Positives = 29/35 (82%)
Frame = +3 / -2
Query: 546 DER*SRRRSPGGIHYTQ*RL*DQ*ERDQAVCCKGG 650
+ER*+ RSP IHYT+*RL*D *ERDQ VCCKGG
Sbjct: 580 NER*TCWRSPCCIHYTE*RL*D**ERDQTVCCKGG 476
Score = 46.4 bits (95), Expect(3) = 6e-031
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = -1 / +3
Query: 649 PPLQQTA*SRSH*SQSLHCV**MPPG 572
PPLQQT *SRSH*SQSLH V**M G
Sbjct: 477 PPLQQTV*SRSH*SQSLHSV**MQQG 554
Score = 44.6 bits (91), Expect(3) = 5e-025
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 606 RAFTAYNECHRDFAGDFIFH 547
RAFT YNEC+RDFA FIFH
Sbjct: 520 RAFTPYNECNRDFASKFIFH 579
Score = 34.5 bits (69), Expect(3) = 4e-045
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / -3
Query: 840 VLYS*DGNGIHKNAKRSL 893
+ YS*DGNGI+K AKRS+
Sbjct: 54 IYYS*DGNGIYKKAKRSI 1
Score = 33.6 bits (67), Expect(3) = 1e-044
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 889 DRLAFLCIPLPSHE* 845
DRLAFL IPLPSHE*
Sbjct: 5 DRLAFLYIPLPSHE* 49
Score = 31.3 bits (62), Expect(3) = 6e-031
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / +3
Query: 885 AWRFCVYHCHLMN 847
AW F +YHCHLM+
Sbjct: 9 AWPFYIYHCHLMS 47
Score = 29.5 bits (58), Expect(3) = 1e-035
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +2 / -2
Query: 845 LFMRWQWYTQKRQAV 889
L MRWQWY K QA+
Sbjct: 49 LLMRWQWYI*KGQAI 5
Score = 28.6 bits (56), Expect(3) = 5e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -3 / +1
Query: 890 RPLGVFVYTIAIS*I 846
R LG+F+YTIAIS*+
Sbjct: 4 RSLGLFIYTIAIS*V 48
>gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_C09_A011 5', mRNA sequence
Length = 564
Score = 180 bits (387), Expect = 4e-044
Identities = 68/124 (54%), Positives = 98/124 (79%)
Frame = +1 / +1
Query: 364 TIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 543
T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+
Sbjct: 1 TVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 180
Query: 544 SMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKIL 723
DE G++P+AFI+R GS +++ ++ FVAK+V YK++ RV F +IPK+P+GKIL
Sbjct: 181 PYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL 360
Query: 724 RKDL 735
R++L
Sbjct: 361 RREL 372
>gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f034f02, DNA
sequence
Length = 687
Score = 179 bits (385), Expect = 8e-044
Identities = 66/112 (58%), Positives = 87/112 (77%)
Frame = +1 / -1
Query: 205 KSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGW 384
K S G ++ N E+K VDPDT SL +N GEIC+R + +M+GY E T+ TID GW
Sbjct: 459 KKNSVGFILPNLEVKFVDPDTGRSLPKNTAGEICVRSQAVMQGYYRKKEETERTIDAKGW 280
Query: 385 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAV 540
LHTGD+GY+DDD ++F+VDR+KE+IKYKGFQV PAELEA+L++HP ++DAAV
Sbjct: 279 LHTGDVGYIDDDGDVFVVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 124
>gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_37_F06_A012 3', mRNA sequence
Length = 515
Score = 175 bits (377), Expect = 1e-042
Identities = 71/102 (69%), Positives = 91/102 (89%)
Frame = +1 / +3
Query: 448 KEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDEVAGEVPVAFIIRSEGSEISENEI 627
KE+IK+KGFQVPPAELEALLI HP I DAAVV KD+ AGEVPVAF++R+ S+I+E+ I
Sbjct: 3 KELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEDAI 182
Query: 628 KQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAA 753
K+FV+K+VVFYKR+++V+FT SIPK+ SGKILR++LRA+LAA
Sbjct: 183 KEFVSKQVVFYKRLHKVYFTPSIPKSASGKILRRELRAKLAA 308
Score = 102 bits (218), Expect = 8e-021
Identities = 52/99 (52%), Positives = 60/99 (60%)
Frame = -3 / -2
Query: 752 AASRALRSFLRILPEGFFGIESVKKXXXXXXXXXTSFATNCLISFSLISEPSLRIMNATG 573
AAS A S LRI P+ G+E VK T TN L++ S +SE + R ATG
Sbjct: 307 AASLARSSLLRIFPDADLGMEGVKYTLCSLL*NTTCLETNSLMASSAMSESAARTTKATG 128
Query: 572 TSPATSSFIETTAASLISGCVMRRASSSAGGTWKPLYLI 456
TSPA SSF TTAAS + G M RASSSAGGTWKPL L+
Sbjct: 127 TSPAASSFCGTTAASAMDGWAMSRASSSAGGTWKPLNLM 11
>gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502381, DNA
sequence
Length = 541
Score = 118 bits (253), Expect(2) = 7e-041
Identities = 50/50 (100%), Positives = 50/50 (100%)
Frame = +1 / -2
Query: 397 DIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 546
DIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS
Sbjct: 540 DIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVS 391
Score = 70.7 bits (148), Expect(2) = 7e-041
Identities = 27/35 (77%), Positives = 35/35 (100%)
Frame = +1 / -2
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEV 651
MKD++AGE+PVAFI+R+EGSE++E+EIKQFVAKEV
Sbjct: 294 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 190
>gb|CL190994.1|CL190994 104_409_10906471_116_32496_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 737
Score = 165 bits (354), Expect = 1e-039
Identities = 66/66 (100%), Positives = 66/66 (100%)
Frame = +1 / +3
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI
Sbjct: 516 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 695
Query: 511 THPEIK 528
THPEIK
Sbjct: 696 THPEIK 713
Score = 108 bits (231), Expect = 1e-022
Identities = 46/66 (69%), Positives = 51/66 (77%)
Frame = -2 / -1
Query: 528 LDFRMCDEKGFKLRRRYLEALVFDYLLQPVNDEDLXXXXXXXXXXXVQPSVLINGVLCRL 349
L+FRMC+EKG K RRRYLEALVFDYLL+PVN+E L VQPS+LINGVLCR
Sbjct: 713 LNFRMCNEKGLKFRRRYLEALVFDYLLEPVNNEYLIVIVHITNVPSVQPSILINGVLCRF 534
Query: 348 WIIQIT 331
WIIQIT
Sbjct: 533 WIIQIT 516
>gb|CW426309.1|CW426309 fsbb001f137k03k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f137k03, DNA
sequence
Length = 479
Score = 146 bits (313), Expect = 7e-034
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = +1 / -3
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLN+P+ATKN+ID DGWLHTGD+G+VDDDDEIFIVDR KEIIKYKG QV PAE+EALLI
Sbjct: 342 GYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRPKEIIKYKGLQVAPAEIEALLI 163
Query: 511 THPEIKDAAVV 543
HP I DAAVV
Sbjct: 162 IHPSIADAAVV 130
>gb|CW194291.1|CW194291 104_617_11180020_116_36786_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 688
Score = 81.7 bits (172), Expect(3) = 8e-033
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1 / -2
Query: 637 VAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 759
V +VVFYK+I++VFFT+SIPKNPSGKILRKDLRARLAAG+
Sbjct: 288 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 166
Score = 70.7 bits (148), Expect(3) = 8e-033
Identities = 27/35 (77%), Positives = 35/35 (100%)
Frame = +1 / -2
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEV 651
MKD++AGE+PVAFI+R+EGSE++E+EIKQFVAKEV
Sbjct: 552 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 448
Score = 32.2 bits (64), Expect(3) = 8e-033
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +1 / -2
Query: 508 ITHPEIKDAAVVS 546
ITHPEIKDAAVVS
Sbjct: 687 ITHPEIKDAAVVS 649
>gb|BE597495.1|BE597495 PI1_70_C05.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 438
Score = 142 bits (305), Expect = 8e-033
Identities = 56/72 (77%), Positives = 66/72 (91%)
Frame = +1 / +1
Query: 7 KSPRVGAADLASIRMVMSGAAPMGKDLQDAFMAKIPNAVLGQGYGMTEAGPVLAMCLAFA 186
KS + DL+S+RMV+SGAAPMGKD++DAFMAK+P AVLGQGYGMTEAGPVL+MCLAFA
Sbjct: 223 KSDEAASHDLSSVRMVLSGAAPMGKDIEDAFMAKLPGAVLGQGYGMTEAGPVLSMCLAFA 402
Query: 187 KEPFEVKSGSCG 222
KEPF+VKSG+CG
Sbjct: 403 KEPFKVKSGACG 438
>gb|CW380207.1|CW380207 fsbb001f059o07k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059o07, DNA
sequence
Length = 603
Score = 139 bits (298), Expect = 8e-032
Identities = 57/68 (83%), Positives = 59/68 (86%)
Frame = +1 / +2
Query: 130 QGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICI 309
QGYGMTEAGPVL+MC AFAKEP K GSCGTVVRNAELK+VDPDT SLGRN PGEICI
Sbjct: 383 QGYGMTEAGPVLSMCPAFAKEPTPAKPGSCGTVVRNAELKVVDPDTGLSLGRNLPGEICI 562
Query: 310 RGEQIMKG 333
RG QIMKG
Sbjct: 563 RGPQIMKG 586
Score = 106 bits (227), Expect = 5e-022
Identities = 46/67 (68%), Positives = 48/67 (71%)
Frame = -3 / -1
Query: 332 PFMICSPRMHISPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGP 153
PFMIC PRM ISPG RP + VSGST SSA TTVP +P L GSLA A HM STGP
Sbjct: 585 PFMICGPRMQISPGRLRPRERPVSGSTTLSSALRTTVPHDPGLAGVGSLANAGHMDSTGP 406
Query: 152 ASVIPYP 132
ASVIPYP
Sbjct: 405 ASVIPYP 385
>gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139064, DNA
sequence
Length = 696
Score = 81.3 bits (171), Expect(3) = 4e-031
Identities = 29/50 (58%), Positives = 39/50 (78%)
Frame = +1 / -1
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV 480
GY+ D EA ++ D +GWL TGD+ Y+D D +F+VDRLKE+IKYKG+QV
Sbjct: 582 GYVADEEANASSFDSEGWLRTGDLCYIDQDGFLFVVDRLKELIKYKGYQV 433
Score = 55.6 bits (115), Expect(3) = 4e-031
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = +1 / -2
Query: 556 EVAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDS 693
E AG++PVA ++R GS+++E ++ VAK V YK+I +V F DS
Sbjct: 140 EEAGQIPVALVVRQPGSKVTEAQVIDHVAKRVAPYKKIRKVLFVDS 3
Score = 37.7 bits (76), Expect(3) = 4e-031
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +1 / -2
Query: 463 YKGFQVPPAELEALLITHPEIKDAAVV 543
Y QVPPAELE +L + PE+ DAAV+
Sbjct: 335 YLSLQVPPAELELVLQSLPEVIDAAVM 255
>gb|CW186709.1|CW186709 104_604_11166709_116_36709_051 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11166709, DNA
sequence
Length = 694
Score = 136 bits (291), Expect = 7e-031
Identities = 56/57 (98%), Positives = 56/57 (98%)
Frame = +1 / -1
Query: 130 QGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSASLGRNQPGE 300
QGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTS SLGRNQPGE
Sbjct: 172 QGYGMTEAGPVLAMCLAFAKEPFEVKSGSCGTVVRNAELKIVDPDTSESLGRNQPGE 2
Score = 134 bits (288), Expect = 2e-030
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = -3 / +3
Query: 299 SPGWFRPSDALVSGSTIFSSAFLTTVPQEPDLTSNGSLAKARHMASTGPASVIPYPW 129
SPGWFRPSD+LVSGSTI SSAFLTTVPQEPD TSNGSLAKARHMASTGPASVIPYPW
Sbjct: 3 SPGWFRPSDSLVSGSTILSSAFLTTVPQEPDFTSNGSLAKARHMASTGPASVIPYPW 173
Score = 128 bits (275), Expect = 1e-028
Identities = 51/59 (86%), Positives = 53/59 (89%)
Frame = -2 / +2
Query: 300 LAWLVPSQRRAGVWVDDLQLRVPDDGATGAGLDLERLLGEGQAHGQHGPRLGHPVPLAE 124
LAWLV SQR AGVWVDDL+LRVPDDGA GAGL LERLLGEGQAHGQHGP LGHP+PL E
Sbjct: 2 LAWLVSSQRLAGVWVDDLELRVPDDGAAGAGLHLERLLGEGQAHGQHGPCLGHPIPLVE 178
Score = 100 bits (212), Expect(2) = 2e-028
Identities = 40/44 (90%), Positives = 43/44 (97%)
Frame = +3 / -3
Query: 168 HVPGLRQGAVRGQVRLLWHRRQERGAEDRRPRHQRVAGTEPARR 299
HVPGLRQGAVRG+VRLL HRRQERGA+DRRPRHQRVAGT+PARR
Sbjct: 134 HVPGLRQGAVRGEVRLLRHRRQERGAQDRRPRHQRVAGTKPARR 3
Score = 47.8 bits (98), Expect(2) = 2e-028
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2 / -2
Query: 125 SARGTG*PRRGPCWPCAW 178
S RG G*PR+GPCWPCAW
Sbjct: 177 STRGMG*PRQGPCWPCAW 124
>gb|CW222301.1|CW222301 104_657_11202303_148_37174_052 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11202303, DNA
sequence
Length = 690
Score = 131 bits (280), Expect = 2e-029
Identities = 51/61 (83%), Positives = 57/61 (93%)
Frame = +1 / +2
Query: 331 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 510
GYLN+P+ATKN+ID DGWLHTGD+G+VDDDDEIFIVDRLKEIIKYKG V PAE+EALLI
Sbjct: 506 GYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLPVAPAEIEALLI 685
Query: 511 T 513
T
Sbjct: 686 T 688
>gb|CW353056.1|CW353056 fsbb001f015k03f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f015k03, DNA
sequence
Length = 665
Score = 81.7 bits (172), Expect(2) = 5e-029
Identities = 33/41 (80%), Positives = 39/41 (95%)
Frame = +1 / -1
Query: 637 VAKEVVFYKRINRVFFTDSIPKNPSGKILRKDLRARLAAGI 759
V +VVFYK+I++VFFT+SIPKNPSGKILRKDLRARLAAG+
Sbjct: 296 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDLRARLAAGV 174
Score = 70.7 bits (148), Expect(2) = 5e-029
Identities = 27/35 (77%), Positives = 35/35 (100%)
Frame = +1 / -1
Query: 547 MKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEV 651
MKD++AGE+PVAFI+R+EGSE++E+EIKQFVAKEV
Sbjct: 560 MKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 456
>gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht61f07 5', DNA sequence
Length = 714
Score = 75.8 bits (159), Expect(3) = 1e-027
Identities = 28/48 (58%), Positives = 38/48 (79%)
Frame = +1 / +3
Query: 337 LNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQV 480
+ D EAT T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QV
Sbjct: 3 VGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQV 146
Score = 44.1 bits (90), Expect(3) = 1e-027
Identities = 16/39 (41%), Positives = 27/39 (69%)
Frame = +1 / +1
Query: 535 AVVSMKDEVAGEVPVAFIIRSEGSEISENEIKQFVAKEV 651
A+ DE G++P+AFI+R GS +++ ++ FVAK+V
Sbjct: 415 ALCRYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQV 531
Score = 43.2 bits (88), Expect(3) = 1e-027
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1 / +1
Query: 454 IIKYKGFQVPPAELEALLITHPEIKDAAVV 543
++ Y QVPPAELE +L +HP+I DAAV+
Sbjct: 223 VLTYILLQVPPAELEHILNSHPDIMDAAVI 312
>gb|CW302339.1|CW302339 104_786_11464668_116_35663_040 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11464668, DNA
sequence
Length = 703
Score = 125 bits (267), Expect = 1e-027
Identities = 45/84 (53%), Positives = 60/84 (71%)
Frame = +1 / +3
Query: 205 KSGSCGTVVRNAELKIVDPDTSASLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGW 384
K S G ++ N E+K VDPDT SL +N GEIC+R + +M GY E T+ TID GW
Sbjct: 450 KKNSVGFILPNLEVKFVDPDTGRSLPKNTAGEICVRSQAVMXGYYRKKEETERTIDAKGW 629
Query: 385 LHTGDIGYVDDDDEIFIVDRLKEI 456
LHTGD+GY+DDD ++F+VDR+KE+
Sbjct: 630 LHTGDVGYIDDDGDVFVVDRIKEL 701
>gb|CW079348.1|CW079348 104_400_10899868_114_32401_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10899868, DNA
sequence
Length = 726
Score = 98.7 bits (209), Expect(3) = 1e-026
Identities = 41/117 (35%), Positives = 67/117 (57%)
Frame = +1 / +2
Query: 379 GWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDE 558
GW HTGDIG VD++ + +V R+KE+I G ++ P E++A+L+ P + A + D+
Sbjct: 221 GWFHTGDIGVVDEEGYVRLVGRIKELINRGGEKISPIEVDAVLLGAPGVAQAVSFGVPDD 400
Query: 559 VAGEVPVAFIIRSEGSEISENEIKQFVAKEVVFYKRINRVFFTDSIPKNPSGKILRK 729
GE +I +GS + E E+ + + +K +VF TD +PK +GKI R+
Sbjct: 401 KYGEEINCAVIPRDGSALREEEVLAHCRRNLASFKVPKKVFITDDLPKTATGKIQRR 571
Score = 38.2 bits (77), Expect(3) = 1e-026
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1 / +2
Query: 292 PGEICIRGEQIMKGYLNDPEATK 360
PGE+CIRG+ + GY +PEA +
Sbjct: 137 PGEVCIRGDNVTAGYKGNPEANE 205
Score = 22.6 bits (43), Expect(3) = 1e-026
Identities = 5/10 (50%), Positives = 6/10 (60%)
Frame = +2 / +2
Query: 836 CCALFMRWQW 865
CC + RW W
Sbjct: 683 CCRIVARWTW 712
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,178,061,219
Number of Sequences: 832831
Number of extensions: 16460934
Number of successful extensions: 121667
Number of sequences better than 1.0e-020: 70
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 36338102108
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)