TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2418946.2.1
(690 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG464515.1|BG464515 EM1_70_F11.g1_A002 Embryo 1 (EM1) So... 200 1e-050
gb|CD425420.1|CD425420 SA1_12_E03.b1_A002 Salicylic acid-tr... 198 7e-050
gb|CN137452.1|CN137452 OX1_57_H05.b1_A002 Oxidatively-stres... 197 1e-049
gb|BM329477.1|BM329477 PIC1_38_E07.g1_A002 Pathogen-infecte... 187 1e-046
gb|CL175625.1|CL175625 104_381_10892573_148_31764_173 Sorgh... 157 3e-046
gb|CW190177.1|CW190177 104_611_11174363_148_36746_036 Sorgh... 146 4e-043
gb|CW148277.1|CW148277 104_542_11140330_148_35005_033 Sorgh... 157 2e-037
gb|CW311756.1|CW311756 104_801_11470397_116_36281_025 Sorgh... 157 2e-037
gb|BZ334804.1|BZ334804 hx93f03.b1 WGS-SbicolorF (JM107 adap... 139 3e-037
gb|BE918255.1|BE918255 OV1_1_A10.g1_A002 Ovary 1 (OV1) Sorg... 144 1e-033
gb|BE918364.1|BE918364 OV1_2_G01.g1_A002 Ovary 1 (OV1) Sorg... 144 1e-033
gb|BE918460.1|BE918460 OV1_4_B02.g1_A002 Ovary 1 (OV1) Sorg... 144 1e-033
gb|BF656415.1|BF656415 FM1_45_E11.g2_A003 Floral-Induced Me... 144 1e-033
gb|BG054070.1|BG054070 OV2_3_A09.g1_A002 Ovary 2 (OV2) Sorg... 144 1e-033
gb|BM330076.1|BM330076 PIC1_46_H07.g1_A002 Pathogen-infecte... 144 1e-033
gb|CF771524.1|CF771524 DSBF1_20_E12.g1_A010 Drought-stresse... 144 1e-033
gb|CN147785.1|CN147785 WOUND1_52_D08.b1_A002 Wounded leaves... 144 2e-033
gb|BM328497.1|BM328497 PIC1_29_H10.g1_A002 Pathogen-infecte... 143 3e-033
gb|CF073421.1|CF073421 FE1_10_A03.b1_A002 Iron-deficient se... 141 9e-033
gb|CW225022.1|CW225022 104_662_11204129_116_37199_071 Sorgh... 139 3e-032
gb|BE918448.1|BE918448 OV1_3_H04.g1_A002 Ovary 1 (OV1) Sorg... 135 6e-031
gb|CD428205.1|CD428205 ETH1_28_F10.b1_A002 Ethylene-treated... 127 1e-028
gb|BF656257.1|BF656257 FM1_44_A08.g1_A003 Floral-Induced Me... 127 2e-028
gb|CW168326.1|CW168326 104_577_11154083_148_36496_034 Sorgh... 126 3e-028
gb|BF656703.1|BF656703 OV2_19_G06.g1_A002 Ovary 2 (OV2) Sor... 126 4e-028
gb|BG355877.1|BG355877 EM1_17_G07.g1_A002 Embryo 1 (EM1) So... 126 4e-028
gb|CD426513.1|CD426513 SA1_21_D06.b1_A002 Salicylic acid-tr... 126 4e-028
gb|CD426607.1|CD426607 SA1_21_D06.g1_A002 Salicylic acid-tr... 126 4e-028
gb|CF074085.1|CF074085 FE1_21_G07.b1_A002 Iron-deficient se... 126 4e-028
gb|BM325630.1|BM325630 PIC1_46_H07.b1_A002 Pathogen-infecte... 114 2e-027
gb|CW047497.1|CW047497 104_285_10512756_115_30217 Sorghum m... 121 1e-026
gb|CW232048.1|CW232048 104_681_11211451_148_37351_072 Sorgh... 117 2e-025
gb|CW299977.1|CW299977 104_783_11463402_116_36252_077 Sorgh... 112 4e-024
gb|CW265210.1|CW265210 104_734_11231740_116_35260_010 Sorgh... 86 6e-024
gb|BG054083.1|BG054083 OV2_3_C07.g1_A002 Ovary 2 (OV2) Sorg... 89 4e-023
gb|CN127234.1|CN127234 RHOH1_21_G03.g3_A002 Acid- and alkal... 108 1e-022
gb|CD219670.1|CD219670 CCC1_58_A07.b1_A007 Callus culture/c... 81 5e-021
>gb|BG464515.1|BG464515 EM1_70_F11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 423
Score = 200 bits (432), Expect = 1e-050
Identities = 83/95 (87%), Positives = 87/95 (91%)
Frame = +1 / +1
Query: 79 LAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSE 258
LAFMP+GWGLLLIAQ +R I GLWGS+KALARGYEI+MGLLLFTPIAFLAWFPFVSE
Sbjct: 1 LAFMPSGWGLLLIAQTMRSAISHMGLWGSVKALARGYEIIMGLLLFTPIAFLAWFPFVSE 180
Query: 259 FQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
FQTRMLFNQAFSRGLQISRILGGHKKDR RNKE*
Sbjct: 181 FQTRMLFNQAFSRGLQISRILGGHKKDRAARNKE* 285
Score = 138 bits (295), Expect = 1e-031
Identities = 59/94 (62%), Positives = 65/94 (69%)
Frame = -2 / -2
Query: 362 YSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXX 183
+SLFR SFLCPPRIREICRPLL AWLNSILVWNS+TNGNQAR A+GVN
Sbjct: 284 HSLFRAALSFLCPPRIREICRPLLKAWLNSILVWNSETNGNQARNAIGVNSSKPMMIS*P 105
Query: 182 XXXALIEPQSPVLWITGRIAWAISSKPHPVGMKA 81
AL +P SP+ I I AI SKPHP+GM A
Sbjct: 104 RASALTDPHSPICEIADLIVCAIRSKPHPLGMNA 3
>gb|CD425420.1|CD425420 SA1_12_E03.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_12_E03_A002 3', mRNA sequence
Length = 555
Score = 198 bits (427), Expect = 7e-050
Identities = 79/105 (75%), Positives = 91/105 (86%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT DI+VC LAF+PTGWG+LLIAQA +P+ GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 51 MTFRDIYVCFLAFLPTGWGILLIAQACKPLARHVGLWGSVRALARAYEIIMGVLLFTPIT 230
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG KK+R R+K+*
Sbjct: 231 ILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKERSARSKD* 365
Score = 106 bits (227), Expect = 3e-022
Identities = 53/104 (50%), Positives = 58/104 (55%)
Frame = -2 / -3
Query: 359 SLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXXX 180
SL R RSF PPRIREIC PLLNA LNSI VWNSDT GN A +GV
Sbjct: 361 SLLRADRSFF*PPRIREICSPLLNA*LNSIRVWNSDTKGNHANIVIGVKRSTPIIIS*AR 182
Query: 179 XXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVM 48
A +P +P G A AISS PHPVG AR T +S V+
Sbjct: 181 ARARTDPHNPTCRARGLQACAISSIPHPVGKNARKHTYISRKVI 50
>gb|CN137452.1|CN137452 OX1_57_H05.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_H05_A002 3', mRNA sequence
Length = 732
Score = 197 bits (425), Expect = 1e-049
Identities = 79/105 (75%), Positives = 90/105 (85%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
MT DIFVC LAF+PTGWG+LLIAQ +P+ GLWGS++ALAR YEI+MG+LLFTPI
Sbjct: 311 MTFRDIFVCFLAFLPTGWGILLIAQPCKPLARHVGLWGSVRALARAYEIIMGVLLFTPIT 490
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG KK+R R+K+*
Sbjct: 491 ILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQKKERSARSKD* 625
Score = 108 bits (231), Expect = 8e-023
Identities = 53/104 (50%), Positives = 58/104 (55%)
Frame = -2 / -1
Query: 359 SLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXXX 180
SL R RSF PPRIREIC PLLNA LNSI VWNSDT GN A +GV
Sbjct: 621 SLLRADRSFF*PPRIREICSPLLNA*LNSIRVWNSDTKGNHANIVIGVKRSTPIIIS*AR 442
Query: 179 XXALIEPQSPVLWITGRIAWAISSKPHPVGMKARMQTNMSSTVM 48
A +P +P G AISS PHPVG AR TN+S V+
Sbjct: 441 ARARTDPHNPTCRARGLQGCAISSIPHPVGKNARKHTNISRKVI 310
>gb|BM329477.1|BM329477 PIC1_38_E07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 511
Score = 187 bits (403), Expect = 1e-046
Identities = 74/97 (76%), Positives = 85/97 (87%)
Frame = +1 / +1
Query: 73 CILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFV 252
C LAF+PTGWG+LLIAQA +P+ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFV
Sbjct: 1 CFLAFLPTGWGILLIAQACKPLARHVGLWGSVRALARAYEIIMGVLLFTPITILAWFPFV 180
Query: 253 SEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
SEFQTRMLFNQAFSRGLQISRILGG KK+R R+K+*
Sbjct: 181 SEFQTRMLFNQAFSRGLQISRILGGQKKERSARSKD* 291
Score = 102 bits (217), Expect = 7e-021
Identities = 50/94 (53%), Positives = 53/94 (56%)
Frame = -2 / -3
Query: 359 SLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVNXXXXXXXXXXX 180
SL R RSF PPRIREIC PLLNA LNSI VWNSDT GN A +GV
Sbjct: 287 SLLRADRSFF*PPRIREICSPLLNA*LNSIRVWNSDTKGNHANIVIGVKRSTPIIIS*AR 108
Query: 179 XXALIEPQSPVLWITGRIAWAISSKPHPVGMKAR 78
A +P +P G A AISS PHPVG AR
Sbjct: 107 ARARTDPHNPTCRARGLQACAISSIPHPVGKNAR 6
>gb|CL175625.1|CL175625 104_381_10892573_148_31764_173 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10892573, DNA
sequence
Length = 745
Score = 157 bits (337), Expect(2) = 3e-046
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +1 / +3
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L IAQA +P+ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 330 ILQIAQACKPLARHVGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 509
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE* 363
AFSRGLQISRILGG KK+R R+K+*
Sbjct: 510 AFSRGLQISRILGGQKKERSARSKD* 587
Score = 49.6 bits (102), Expect(2) = 3e-046
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAI 129
MT DIFVC LAF+PTGWG+LL+ ++
Sbjct: 167 MTFRDIFVCFLAFLPTGWGILLVRHSL 247
>gb|CW190177.1|CW190177 104_611_11174363_148_36746_036 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11174363, DNA
sequence
Length = 703
Score = 146 bits (314), Expect(2) = 4e-043
Identities = 59/78 (75%), Positives = 68/78 (87%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L IAQA +P+ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 412 ILQIAQACKPLARHVGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 591
Query: 286 AFSRGLQISRILGGHKKD 339
AFSRGLQISRILGG K++
Sbjct: 592 AFSRGLQISRILGGQKRN 645
Score = 49.6 bits (102), Expect(2) = 4e-043
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAI 129
MT DIFVC LAF+PTGWG+LL+ ++
Sbjct: 249 MTFRDIFVCFLAFLPTGWGILLVRHSL 329
>gb|CW148277.1|CW148277 104_542_11140330_148_35005_033 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11140330, DNA
sequence
Length = 721
Score = 157 bits (337), Expect = 2e-037
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L IAQA +P+ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 121 ILQIAQACKPLARHVGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 300
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE* 363
AFSRGLQISRILGG KK+R R+K+*
Sbjct: 301 AFSRGLQISRILGGQKKERSARSKD* 378
>gb|CW311756.1|CW311756 104_801_11470397_116_36281_025 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470397, DNA
sequence
Length = 730
Score = 157 bits (337), Expect = 2e-037
Identities = 64/86 (74%), Positives = 74/86 (86%)
Frame = +1 / +1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L IAQA +P+ GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQ
Sbjct: 61 ILQIAQACKPLARHVGLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQ 240
Query: 286 AFSRGLQISRILGGHKKDRGTRNKE* 363
AFSRGLQISRILGG KK+R R+K+*
Sbjct: 241 AFSRGLQISRILGGQKKERSARSKD* 318
>gb|BZ334804.1|BZ334804 hx93f03.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone hx93f03 5', DNA sequence
Length = 633
Score = 139 bits (299), Expect(2) = 3e-037
Identities = 56/74 (75%), Positives = 65/74 (87%)
Frame = +1 / -3
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PVI GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 262 ISQASKPVIKACGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQTRLLFNQAFS 83
Query: 295 RGLQISRILGGHKK 336
RGLQISRIL G KK
Sbjct: 82 RGLQISRILAGGKK 41
Score = 38.6 bits (78), Expect(2) = 3e-037
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPV 138
+TV DIF LAF PTGW +L + + P+
Sbjct: 540 LTVGDIFASFLAFAPTGWAILQVPPPVSPL 451
>gb|BE918255.1|BE918255 OV1_1_A10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 352
Score = 144 bits (310), Expect = 1e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 25 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 204
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 205 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 321
>gb|BE918364.1|BE918364 OV1_2_G01.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 651
Score = 144 bits (310), Expect = 1e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 128 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 307
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 308 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 424
>gb|BE918460.1|BE918460 OV1_4_B02.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 650
Score = 144 bits (310), Expect = 1e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 116 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 295
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 296 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 412
>gb|BF656415.1|BF656415 FM1_45_E11.g2_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 601
Score = 144 bits (310), Expect = 1e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 58 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 237
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 238 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 354
>gb|BG054070.1|BG054070 OV2_3_A09.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 590
Score = 144 bits (310), Expect = 1e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 62 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 241
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 242 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 358
>gb|BM330076.1|BM330076 PIC1_46_H07.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 612
Score = 144 bits (310), Expect = 1e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 60 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 239
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 240 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 356
>gb|CF771524.1|CF771524 DSBF1_20_E12.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_20_E12_A010 3', mRNA sequence
Length = 634
Score = 144 bits (310), Expect = 1e-033
Identities = 55/99 (55%), Positives = 77/99 (77%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 65 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 244
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 245 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 361
>gb|CN147785.1|CN147785 WOUND1_52_D08.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_52_D08_A002 3', mRNA sequence
Length = 735
Score = 144 bits (308), Expect = 2e-033
Identities = 55/99 (55%), Positives = 76/99 (76%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 209 LSIGDVFASILAFVPTGWGIISIAMAWNPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 388
Query: 229 FLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRG 345
+WFPF+S FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 389 ICSWFPFISTFQTRLLFNQAFSRGLEISLILAGNNPNAG 505
>gb|BM328497.1|BM328497 PIC1_29_H10.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 437
Score = 143 bits (306), Expect = 3e-033
Identities = 58/71 (81%), Positives = 65/71 (91%)
Frame = +1 / +1
Query: 151 GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGH 330
GLWGS++ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG
Sbjct: 10 GLWGSVRALARAYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 189
Query: 331 KKDRGTRNKE* 363
KK+R R+K+*
Sbjct: 190 KKERFARSKD* 222
>gb|CF073421.1|CF073421 FE1_10_A03.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_10_A03_A002 3', mRNA sequence
Length = 417
Score = 141 bits (303), Expect = 9e-033
Identities = 58/71 (81%), Positives = 64/71 (90%)
Frame = +1 / +2
Query: 151 GLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGH 330
GLWGS+ ALAR YEI+MG+LLFTPI LAWFPFVSEFQTRMLFNQAFSRGLQISRILGG
Sbjct: 14 GLWGSVGALARPYEIIMGVLLFTPITILAWFPFVSEFQTRMLFNQAFSRGLQISRILGGQ 193
Query: 331 KKDRGTRNKE* 363
KK+R R+K+*
Sbjct: 194 KKERSARSKD* 226
>gb|CW225022.1|CW225022 104_662_11204129_116_37199_071 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11204129, DNA
sequence
Length = 682
Score = 139 bits (299), Expect = 3e-032
Identities = 56/74 (75%), Positives = 65/74 (87%)
Frame = +1 / -2
Query: 115 IAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFS 294
I+QA +PVI GLWGS+KAL+RGYE LMG+++F P+A LAWFPFVSEFQTR+LFNQAFS
Sbjct: 558 ISQASKPVIKACGLWGSVKALSRGYEYLMGIVIFVPVAVLAWFPFVSEFQTRLLFNQAFS 379
Query: 295 RGLQISRILGGHKK 336
RGLQISRIL G KK
Sbjct: 378 RGLQISRILAGGKK 337
>gb|BE918448.1|BE918448 OV1_3_H04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA sequence
Length = 508
Score = 135 bits (290), Expect = 6e-031
Identities = 52/89 (58%), Positives = 70/89 (78%)
Frame = +1 / +1
Query: 79 LAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSE 258
LAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA +WFPF+S
Sbjct: 1 LAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIAICSWFPFIST 180
Query: 259 FQTRMLFNQAFSRGLQISRILGGHKKDRG 345
FQTR+LFNQAFSRGL+IS IL G+ + G
Sbjct: 181 FQTRLLFNQAFSRGLEISLILAGNNPNAG 267
>gb|CD428205.1|CD428205 ETH1_28_F10.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_28_F10_A002 3', mRNA sequence
Length = 673
Score = 127 bits (273), Expect = 1e-028
Identities = 52/86 (60%), Positives = 64/86 (74%)
Frame = +1 / +1
Query: 76 ILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVS 255
+LAF+PTGWGL+ IAQ IRP I T +W SI ++AR YEIL+G + P+A L+W P
Sbjct: 1 LLAFIPTGWGLISIAQVIRPFIESTVVWDSIISVARLYEILLGAFIMAPVALLSWLPGFQ 180
Query: 256 EFQTRMLFNQAFSRGLQISRILGGHK 333
E QTR+LFN+ FSRGLQISRIL G K
Sbjct: 181 EMQTRVLFNEGFSRGLQISRILTGKK 258
>gb|BF656257.1|BF656257 FM1_44_A08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 397
Score = 127 bits (272), Expect = 2e-028
Identities = 54/57 (94%), Positives = 55/57 (96%)
Frame = +1 / +1
Query: 193 ILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
ILMGLLLFTPIAFLAWFP VSEFQTRMLFNQAFSRGLQISRILGG KKDRG+RNKE*
Sbjct: 1 ILMGLLLFTPIAFLAWFPLVSEFQTRMLFNQAFSRGLQISRILGGRKKDRGSRNKE* 171
Score = 118 bits (253), Expect = 7e-026
Identities = 48/56 (85%), Positives = 52/56 (92%)
Frame = -2 / -3
Query: 380 SAAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMGVN 213
++A++ YSLFR PRSFL PPRIREICRPLL AWLNSILVWNSDTNGNQARKAMGVN
Sbjct: 188 TSASRNYSLFRDPRSFLRPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMGVN 21
Score = 112 bits (240), Expect = 4e-024
Identities = 47/59 (79%), Positives = 49/59 (83%)
Frame = +3 / +3
Query: 198 DGTSPVHAHRLPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRIGLGC 374
DGTSPVHAH LP LVPV V IPDQDAVQPG+QQRSADLPYP R QERPR PEQ + GC
Sbjct: 6 DGTSPVHAHCLPCLVPVGVRIPDQDAVQPGLQQRSADLPYPRRPQERPRIPEQGVVTGC 182
>gb|CW168326.1|CW168326 104_577_11154083_148_36496_034 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11154083, DNA
sequence
Length = 690
Score = 126 bits (270), Expect = 3e-028
Identities = 53/75 (70%), Positives = 59/75 (78%)
Frame = +1 / -2
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L I QA P+I +T LW SI L R YE +MGL+LF PI FL+WFPFVSEFQTR+LFNQA
Sbjct: 503 LQIGQACSPLIRRTMLWDSIMELGRSYENIMGLILFLPIGFLSWFPFVSEFQTRLLFNQA 324
Query: 289 FSRGLQISRILGGHK 333
FSRGLQISRIL G K
Sbjct: 323 FSRGLQISRILAGQK 279
>gb|BF656703.1|BF656703 OV2_19_G06.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 126 bits (269), Expect = 4e-028
Identities = 50/99 (50%), Positives = 69/99 (69%)
Frame = +1 / +2
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAF 231
T+ D+F LAF+ TGW +L +A + V+ LW S++ +AR Y+ MG ++F PI F
Sbjct: 29 TIADLFASALAFIATGWCILCLAVTWKKVVKTLRLWDSVREIARMYDAGMGAIIFVPIVF 208
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+WFPFVS FQ+R LFNQAFSRGL+IS IL G+K ++ T
Sbjct: 209 FSWFPFVSTFQSRFLFNQAFSRGLEISLILAGNKANQQT 325
>gb|BG355877.1|BG355877 EM1_17_G07.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 608
Score = 126 bits (269), Expect = 4e-028
Identities = 50/99 (50%), Positives = 69/99 (69%)
Frame = +1 / +1
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAF 231
T+ D+F LAF+ TGW +L +A + V+ LW S++ +AR Y+ MG ++F PI F
Sbjct: 169 TIADLFASALAFIATGWCILCLAVTWKKVVKTLRLWDSVREIARMYDAGMGAIIFVPIVF 348
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+WFPFVS FQ+R LFNQAFSRGL+IS IL G+K ++ T
Sbjct: 349 FSWFPFVSTFQSRFLFNQAFSRGLEISLILAGNKANQQT 465
>gb|CD426513.1|CD426513 SA1_21_D06.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_21_D06_A002 3', mRNA sequence
Length = 637
Score = 126 bits (269), Expect = 4e-028
Identities = 50/99 (50%), Positives = 69/99 (69%)
Frame = +1 / +3
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAF 231
T+ D+F LAF+ TGW +L +A + V+ LW S++ +AR Y+ MG ++F PI F
Sbjct: 147 TIADLFASALAFIATGWCILCLAVTWKKVVKTLRLWDSVREIARMYDAGMGAIIFVPIVF 326
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+WFPFVS FQ+R LFNQAFSRGL+IS IL G+K ++ T
Sbjct: 327 FSWFPFVSTFQSRFLFNQAFSRGLEISLILAGNKANQQT 443
>gb|CD426607.1|CD426607 SA1_21_D06.g1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_21_D06_A002 5', mRNA sequence
Length = 612
Score = 126 bits (269), Expect = 4e-028
Identities = 50/99 (50%), Positives = 69/99 (69%)
Frame = +1 / +2
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAF 231
T+ D+F LAF+ TGW +L +A + V+ LW S++ +AR Y+ MG ++F PI F
Sbjct: 146 TIADLFASALAFIATGWCILCLAVTWKKVVKTLRLWDSVREIARMYDAGMGAIIFVPIVF 325
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+WFPFVS FQ+R LFNQAFSRGL+IS IL G+K ++ T
Sbjct: 326 FSWFPFVSTFQSRFLFNQAFSRGLEISLILAGNKANQQT 442
>gb|CF074085.1|CF074085 FE1_21_G07.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA
clone FE1_21_G07_A002 3', mRNA sequence
Length = 587
Score = 126 bits (269), Expect = 4e-028
Identities = 50/99 (50%), Positives = 69/99 (69%)
Frame = +1 / +1
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAF 231
T+ D+F LAF+ TGW +L +A + V+ LW S++ +AR Y+ MG ++F PI F
Sbjct: 130 TIADLFASALAFIATGWCILCLAVTWKKVVKTLRLWDSVREIARMYDAGMGAIIFVPIVF 309
Query: 232 LAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+WFPFVS FQ+R LFNQAFSRGL+IS IL G+K ++ T
Sbjct: 310 FSWFPFVSTFQSRFLFNQAFSRGLEISLILAGNKANQQT 426
>gb|BM325630.1|BM325630 PIC1_46_H07.b1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 588
Score = 114 bits (243), Expect(2) = 2e-027
Identities = 41/79 (51%), Positives = 61/79 (77%)
Frame = +1 / +2
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+F ILAF+PTGWG++ IA A +PV+ K GLW +++ALAR Y+ G+++F PIA
Sbjct: 305 LSIGDVFASILAFVPTGWGIISIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIA 484
Query: 229 FLAWFPFVSEFQTRMLFNQ 285
+WFPF+S FQTR+LF +
Sbjct: 485 ICSWFPFISTFQTRLLFTR 541
Score = 29.5 bits (58), Expect(2) = 2e-027
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +1 / +1
Query: 280 NQAFSRGLQISRILGGH 330
+QAFSRGL+IS IL G+
Sbjct: 535 HQAFSRGLEISLILAGN 585
>gb|CW047497.1|CW047497 104_285_10512756_115_30217 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10512756, DNA
sequence
Length = 421
Score = 121 bits (259), Expect = 1e-026
Identities = 50/70 (71%), Positives = 56/70 (80%)
Frame = +1 / +3
Query: 124 AIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGL 303
A P+I +T LW SI L R YE +MGL+LF PI FL+WFPFVSEFQTR+LFNQAFSRGL
Sbjct: 3 ACSPLIRRTMLWDSIMELGRSYENIMGLILFLPIGFLSWFPFVSEFQTRLLFNQAFSRGL 182
Query: 304 QISRILGGHK 333
QISRIL G K
Sbjct: 183 QISRILAGQK 212
>gb|CW232048.1|CW232048 104_681_11211451_148_37351_072 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11211451, DNA
sequence
Length = 580
Score = 117 bits (250), Expect = 2e-025
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -2 / -2
Query: 377 AAAQPYSLFRVPRSFLCPPRIREICRPLLNAWLNSILVWNSDTNGNQARKAMG 219
+A++ YSLFRVPRSFL PPRIREICRPLL AWLNSILVWNSDTNGNQARKAMG
Sbjct: 159 SASRNYSLFRVPRSFLWPPRIREICRPLLKAWLNSILVWNSDTNGNQARKAMG 1
Score = 116 bits (248), Expect = 3e-025
Identities = 48/48 (100%), Positives = 48/48 (100%)
Frame = +1 / +2
Query: 220 PIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 363
PIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE*
Sbjct: 2 PIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGTRNKE* 145
Score = 101 bits (216), Expect = 9e-021
Identities = 42/52 (80%), Positives = 44/52 (84%)
Frame = +3 / +1
Query: 219 AHRLPRLVPVRVGIPDQDAVQPGVQQRSADLPYPGRTQERPRDPEQRIGLGC 374
AH LP LVPVRV IPDQDAVQPG+QQRSADLPYP R QERPRDPEQ + GC
Sbjct: 1 AHCLPCLVPVRVRIPDQDAVQPGLQQRSADLPYPRRPQERPRDPEQGVVTGC 156
>gb|CW299977.1|CW299977 104_783_11463402_116_36252_077 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11463402, DNA
sequence
Length = 563
Score = 112 bits (240), Expect = 4e-024
Identities = 45/79 (56%), Positives = 60/79 (75%)
Frame = +1 / -3
Query: 109 LLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQA 288
L IA A +PV+ K GLW +++ALAR Y+ G+++F PIA +WFPF+S FQTR+LFNQA
Sbjct: 339 LQIAMAWKPVVKKLGLWKTVRALARLYDAGTGMIIFIPIAICSWFPFISTFQTRLLFNQA 160
Query: 289 FSRGLQISRILGGHKKDRG 345
FSRGL+IS IL G+ + G
Sbjct: 159 FSRGLEISLILAGNNPNAG 103
>gb|CW265210.1|CW265210 104_734_11231740_116_35260_010 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11231740, DNA
sequence
Length = 651
Score = 86.3 bits (182), Expect(2) = 6e-024
Identities = 39/84 (46%), Positives = 50/84 (59%)
Frame = +1 / -1
Query: 106 LLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQ 285
+L I Q +RP I +W I+ +A Y+ MG LLF PIA LAW P +S QTR+LFN+
Sbjct: 354 VLQIVQVLRPKIEYYAIWEPIQVIAHAYDYGMGSLLFFPIAVLAWMPVISAIQTRVLFNR 175
Query: 286 AFSRGLQISRILGGHKKDRGTRNK 357
AFSR LQI + K R N+
Sbjct: 174 AFSRQLQIQPFIDVGKTKRR*HNR 103
Score = 45.5 bits (93), Expect(2) = 6e-024
Identities = 13/24 (54%), Positives = 22/24 (91%)
Frame = +1 / -1
Query: 49 MTVLDIFVCILAFMPTGWGLLLIA 120
++++D+ +C LAF+PTGWGLLL++
Sbjct: 498 LSIMDLIICCLAFIPTGWGLLLVS 427
>gb|BG054083.1|BG054083 OV2_3_C07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA sequence
Length = 567
Score = 88.6 bits (187), Expect(2) = 4e-023
Identities = 35/60 (58%), Positives = 46/60 (76%)
Frame = +1 / +3
Query: 169 KALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHKKDRGT 348
+ +AR Y+ MG ++F PI F +WFPFVS FQ+R LFNQAFSRGL+IS IL G+K ++ T
Sbjct: 222 REIARMYDAGMGAIIFVPIVFFSWFPFVSTFQSRFLFNQAFSRGLEISLILAGNKANQQT 401
Score = 40.5 bits (82), Expect(2) = 4e-023
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +1 / +2
Query: 52 TVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSI 168
T+ D+F LAF+ TGW +L +A + V+ LW S+
Sbjct: 104 TIADLFASALAFIATGWCILCLAVTWKKVVKTLRLWDSV 220
>gb|CN127234.1|CN127234 RHOH1_21_G03.g3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_21_G03_A002 5', mRNA sequence
Length = 809
Score = 108 bits (230), Expect = 1e-022
Identities = 41/78 (52%), Positives = 54/78 (69%)
Frame = +1 / +3
Query: 49 MTVLDIFVCILAFMPTGWGLLLIAQAIRPVIHKTGLWGSIKALARGYEILMGLLLFTPIA 228
+++ D+ +C LAF+PTGWGLLLI Q +RP I +W I+ +A Y+ MG LLF PIA
Sbjct: 576 LSIXDLIICCLAFIPTGWGLLLIVQVLRPKIEYYAIWEPIQVIAHAYDYGMGSLLFFPIA 755
Query: 229 FLAWFPFVSEFQTRMLFN 282
LAW P +S QTR+LFN
Sbjct: 756 VLAWMPVISAIQTRVLFN 809
>gb|CD219670.1|CD219670 CCC1_58_A07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_58_A07_A007 3', mRNA sequence
Length = 669
Score = 80.8 bits (170), Expect(2) = 5e-021
Identities = 30/60 (50%), Positives = 45/60 (75%)
Frame = +1 / +1
Query: 154 LWGSIKALARGYEILMGLLLFTPIAFLAWFPFVSEFQTRMLFNQAFSRGLQISRILGGHK 333
+W ++ +AR Y+IL G+++ P+A L+W P + E QTR+LFN+AFSRGL IS+I+ G K
Sbjct: 238 VWKTVVTVARLYDILFGVIVMAPVAVLSWLPGLQEMQTRILFNEAFSRGLHISQIITGKK 417
Score = 41.4 bits (84), Expect(2) = 5e-021
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1 / +1
Query: 58 LDIFVCILAFMPTGWGLLLIAQAIRPVIHKT 150
+D F +LAF+PTGWG++ IA +P + ++
Sbjct: 139 VDTFTSLLAFLPTGWGIVSIALVFKPYLRRS 231
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 823,715,669
Number of Sequences: 832831
Number of extensions: 12130202
Number of successful extensions: 95892
Number of sequences better than 1.0e-020: 38
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20792394350
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)