TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2405110.2.1
(945 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CF486234.1|CF486234 POL1_36_C03.g1_A002 Pollen Sorghum b... 310 1e-087
gb|AW744784.1|AW744784 LG1_384_C09.b1_A002 Light Grown 1 (L... 291 1e-082
gb|BE918962.1|BE918962 FM1_2_D02.b1_A003 Floral-Induced Mer... 289 5e-082
gb|AW744816.1|AW744816 LG1_384_C09.g1_A002 Light Grown 1 (L... 280 4e-080
gb|BE918818.1|BE918818 FM1_2_D02.g1_A003 Floral-Induced Mer... 273 2e-078
gb|BG947288.1|BG947288 IP1_3_G03.b1_A002 Immature pannicle ... 258 7e-076
gb|BI139854.1|BI139854 IP1_46_D07.b1_A002 Immature pannicle... 168 3e-047
gb|CW284518.1|CW284518 104_761_11409830_148_35496_057 Sorgh... 159 2e-044
gb|CW123334.1|CW123334 104_502_11111159_116_34687_086 Sorgh... 159 2e-041
gb|BG947201.1|BG947201 IP1_3_G03.g1_A002 Immature pannicle ... 105 1e-038
gb|BZ412886.1|BZ412886 165d4_ctg1 Subclones from BAC clones... 116 5e-038
gb|BG239925.1|BG239925 OV1_30_G09.g1_A002 Ovary 1 (OV1) Sor... 83 6e-025
gb|CN152557.1|CN152557 WOUND1_82_G03.g1_A002 Wounded leaves... 82 8e-025
gb|CN127333.1|CN127333 RHOH1_22_H09.b1_A002 Acid- and alkal... 82 8e-025
gb|CX606873.1|CX606873 ANR1_5_A05.g1_A002 Anaerobic roots S... 82 8e-025
gb|CX611989.1|CX611989 ANR1_27_H04.g1_A002 Anaerobic roots ... 82 8e-025
gb|CX611901.1|CX611901 ANR1_27_H04.b1_A002 Anaerobic roots ... 82 8e-025
gb|CN152474.1|CN152474 WOUND1_82_G03.b1_A002 Wounded leaves... 82 8e-025
gb|CX606782.1|CX606782 ANR1_5_A05.b1_A002 Anaerobic roots S... 82 8e-025
gb|CD225320.1|CD225320 CCC1_39_G06.g1_A007 Callus culture/c... 82 8e-025
gb|BE367626.1|BE367626 PI1_9_A07.g1_A002 Pathogen induced 1... 82 8e-025
gb|CF486690.1|CF486690 POL1_39_D12.b1_A002 Pollen Sorghum b... 82 8e-025
gb|CD431965.1|CD431965 ETH1_12_A01.b1_A002 Ethylene-treated... 82 8e-025
gb|BE367620.1|BE367620 PI1_9_A07.b1_A002 Pathogen induced 1... 82 8e-025
gb|AW745063.1|AW745063 LG1_386_C08.b1_A002 Light Grown 1 (L... 82 8e-025
gb|CD432007.1|CD432007 ETH1_12_A01.g1_A002 Ethylene-treated... 82 8e-025
gb|BE367055.1|BE367055 PI1_42_F01.g2_A002 Pathogen induced ... 82 8e-025
gb|BG240501.1|BG240501 OV1_30_G09.b1_A002 Ovary 1 (OV1) Sor... 82 8e-025
gb|CN141039.1|CN141039 OX1_49_A08.b1_A002 Oxidatively-stres... 82 2e-024
gb|CD431369.1|CD431369 ETH1_8_A10.g1_A002 Ethylene-treated ... 82 2e-024
gb|BE599149.1|BE599149 PI1_85_H12.b1_A002 Pathogen induced ... 82 2e-024
gb|BE597762.1|BE597762 PI1_85_H12.g1_A002 Pathogen induced ... 82 2e-024
gb|CD462825.1|CD462825 ETH1_40_E07.g2_A002 Ethylene-treated... 81 5e-024
gb|AW745233.1|AW745233 LG1_387_F10.b1_A002 Light Grown 1 (L... 81 5e-024
gb|BF585878.1|BF585878 FM1_25_F06.g1_A003 Floral-Induced Me... 80 9e-024
gb|BE361005.1|BE361005 DG1_68_F12.g1_A002 Dark Grown 1 (DG1... 82 2e-023
gb|BF587789.1|BF587789 FM1_40_E10.g1_A003 Floral-Induced Me... 82 2e-023
gb|BE126239.1|BE126239 DG1_68_F12.b1_A002 Dark Grown 1 (DG1... 82 2e-023
gb|DN551766.1|DN551766 pSPR-RT-A-H1_G05_C246 pSPR Sorghum p... 81 4e-023
gb|CF428071.1|CF428071 PH1_12_D10.g1_A002 Phosphorous-defic... 81 4e-023
gb|CX607625.1|CX607625 ANR1_29_G03.g1_A002 Anaerobic roots ... 80 4e-023
gb|BE593870.1|BE593870 WS1_103_D04.g1_A002 Water-stressed 1... 81 4e-023
gb|CD226755.1|CD226755 CCC1_47_E08.g1_A007 Callus culture/c... 81 4e-023
gb|CD462073.1|CD462073 SA1_39_H12.b1_A002 Salicylic acid-tr... 81 4e-023
gb|CD224718.1|CD224718 CCC1_35_G07.g1_A007 Callus culture/c... 81 4e-023
gb|CD224628.1|CD224628 CCC1_35_G07.b1_A007 Callus culture/c... 81 4e-023
gb|BG933602.1|BG933602 OV1_32_C11.g1_A002 Ovary 1 (OV1) Sor... 81 4e-023
gb|BM328789.1|BM328789 PIC1_26_E11.g1_A002 Pathogen-infecte... 81 4e-023
gb|CN145142.1|CN145142 WOUND1_27_C01.b2_A002 Wounded leaves... 81 4e-023
gb|AW924658.1|AW924658 WS1_71_H06.b1_A002 Water-stressed 1 ... 81 4e-023
gb|BM324291.1|BM324291 PIC1_26_E11.b1_A002 Pathogen-infecte... 81 4e-023
gb|AW679960.1|AW679960 WS1_34_A12.g1_A002 Water-stressed 1 ... 81 4e-023
gb|AW745645.1|AW745645 WS1_36_D10.b1_A002 Water-stressed 1 ... 81 4e-023
gb|AW678504.1|AW678504 WS1_16_E12.b1_A002 Water-stressed 1 ... 81 4e-023
gb|AW745689.1|AW745689 WS1_36_D06.g1_A002 Water-stressed 1 ... 81 4e-023
gb|CD226662.1|CD226662 CCC1_47_E08.b1_A007 Callus culture/c... 81 4e-023
gb|BE601217.1|BE601217 PI1_90_D05.g1_A002 Pathogen induced ... 78 4e-023
gb|BE362368.1|BE362368 DG1_86_E12.b1_A002 Dark Grown 1 (DG1... 81 4e-023
gb|AW745429.1|AW745429 WS1_34_A12.b1_A002 Water-stressed 1 ... 81 4e-023
gb|AW745686.1|AW745686 WS1_36_D10.g1_A002 Water-stressed 1 ... 81 4e-023
gb|AW745648.1|AW745648 WS1_36_D06.b1_A002 Water-stressed 1 ... 81 4e-023
gb|BE593967.1|BE593967 WS1_104_E12.g1_A002 Water-stressed 1... 81 4e-023
gb|CF073737.1|CF073737 FE1_12_B03.b1_A002 Iron-deficient se... 81 4e-023
gb|AW678345.1|AW678345 WS1_14_B08.g1_A002 Water-stressed 1 ... 81 4e-023
gb|AW680263.1|AW680263 WS1_50_A10.g1_A002 Water-stressed 1 ... 81 4e-023
gb|AW745320.1|AW745320 WS1_33_D01.b1_A002 Water-stressed 1 ... 81 4e-023
gb|AW678552.1|AW678552 WS1_16_E12.g1_A002 Water-stressed 1 ... 81 4e-023
gb|BE593346.1|BE593346 WS1_100_F07.g1_A002 Water-stressed 1... 81 4e-023
gb|BG240634.1|BG240634 OV1_32_C11.b1_A002 Ovary 1 (OV1) Sor... 81 4e-023
gb|BE593878.1|BE593878 WS1_103_E01.g1_A002 Water-stressed 1... 81 4e-023
gb|BM323706.1|BM323706 PIC1_22_D03.b1_A002 Pathogen-infecte... 81 4e-023
gb|BE363843.1|BE363843 WS1_71_H06.g2_A002 Water-stressed 1 ... 81 4e-023
gb|CN145221.1|CN145221 WOUND1_27_C01.g1_A002 Wounded leaves... 84 6e-023
gb|BM326634.1|BM326634 PIC1_59_G09.b1_A002 Pathogen-infecte... 83 8e-023
gb|CX610858.1|CX610858 ANR1_21_F01.b1_A002 Anaerobic roots ... 80 1e-022
gb|CN137878.1|CN137878 OX1_60_G01.b1_A002 Oxidatively-stres... 83 1e-022
gb|CD226737.1|CD226737 CCC1_47_G10.g1_A007 Callus culture/c... 80 1e-022
gb|CD209748.1|CD209748 HS1_54_D07.g1_A012 Heat-shocked seed... 80 1e-022
gb|CD206803.1|CD206803 HS1_25_C12.b1_A012 Heat-shocked seed... 80 1e-022
gb|CD209723.1|CD209723 HS1_54_D07.b1_A012 Heat-shocked seed... 80 1e-022
gb|AI724180.1|AI724180 RHIZ1_8_B01.y2_A001 Rhizome1 (RHIZ1)... 79 2e-022
gb|AW679853.1|AW679853 WS1_32_F03.g1_A002 Water-stressed 1 ... 79 2e-022
gb|AW677219.1|AW677219 DG1_6_A11.g1_A002 Dark Grown 1 (DG1)... 79 2e-022
gb|BE592667.1|BE592667 WS1_96_F12.b1_A002 Water-stressed 1 ... 79 2e-022
gb|CF073159.1|CF073159 FE1_28_D08.b1_A002 Iron-deficient se... 74 2e-022
gb|BF317746.1|BF317746 OV1_12_H07.g1_A002 Ovary 1 (OV1) Sor... 79 2e-022
gb|BE638204.1|BE638204 WS1_96_F12.g1_A002 Water-stressed 1 ... 79 2e-022
gb|BG048078.1|BG048078 OV1_27_D03.g1_A002 Ovary 1 (OV1) Sor... 78 5e-022
gb|AW679910.1|AW679910 WS1_33_D01.g1_A002 Water-stressed 1 ... 77 1e-021
gb|BE593217.1|BE593217 WS1_99_A04.g1_A002 Water-stressed 1 ... 77 1e-021
>gb|CF486234.1|CF486234 POL1_36_C03.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_36_C03_A002 5', mRNA sequence
Length = 626
Score = 310 bits (672), Expect(2) = 4e-087
Identities = 128/152 (84%), Positives = 129/152 (84%)
Frame = -1 / +3
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP
Sbjct: 171 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 350
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PKMQF+TKVWHPNISSQNGAICLDILKDQW PDDPQDAVV
Sbjct: 351 PKMQFVTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAPDDPQDAVV 530
Query: 477 AQQYLRDYPTFAATARYWTEAFAKSASTGMEE 382
AQ YLRDYPTFAATARYWTEAF KSASTGMEE
Sbjct: 531 AQPYLRDYPTFAATARYWTEAFPKSASTGMEE 626
Score = 258 bits (557), Expect(3) = 1e-087
Identities = 106/110 (96%), Positives = 108/110 (98%)
Frame = +2 / -2
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VFKVRAGLH*SFR+SKQIAPFWLLMLGCHTLV NCIFGGSKGYPPGRR+SMT VPPS*GL
Sbjct: 463 VFKVRAGLH*SFRISKQIAPFWLLMLGCHTLVTNCIFGGSKGYPPGRRMSMTKVPPS*GL 284
Query: 725 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 874
SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL
Sbjct: 283 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 134
Score = 224 bits (483), Expect(2) = 3e-064
Identities = 93/107 (86%), Positives = 99/107 (92%)
Frame = +1 / -1
Query: 382 LFHAR*CTLRKGLCPVASRSGKCWIVTQVLLGNNSILRIIRCRRRKQSLKGKESSLQGKG 561
LFHA * TL +GLCPVASRS KCWIVTQV L NNSILRIIRCRRRKQSLKGKE LQGKG
Sbjct: 626 LFHAS*RTLWEGLCPVASRSSKCWIVTQVRLCNNSILRIIRCRRRKQSLKGKECRLQGKG 447
Query: 562 WAPLIFQNVQANCSILAADVRVPYFGDELHLRRLKGISTGQADIDDE 702
WAPLIFQN+QANCSILAADVR+PYFGD+LHLRRLKGISTG+AD+DDE
Sbjct: 446 WAPLIFQNIQANCSILAADVRMPYFGDKLHLRRLKGISTGEADVDDE 306
Score = 188 bits (406), Expect = 8e-047
Identities = 84/93 (90%), Positives = 85/93 (91%)
Frame = +3 / -3
Query: 402 HSSQRPLSSSEP*RQMLDSHAGTVGQQQHPEDHQVQEKKAELEGKGEQSSR*GLGSTDLS 581
HS RPLSSSEP*+QMLDSHAGTV QQQHPEDHQVQEKKAELEGKG SSR*GLGSTDLS
Sbjct: 606 HSLGRPLSSSEP*QQMLDSHAGTVVQQQHPEDHQVQEKKAELEGKGVPSSR*GLGSTDLS 427
Query: 582 ECPSKLLHFGC*C*GAILW**TASSEAQRDIHR 680
E PSKLLHFGC*C* AILW* TASSEAQRDIHR
Sbjct: 426 EYPSKLLHFGC*C*DAILW*QTASSEAQRDIHR 328
Score = 116 bits (247), Expect(4) = 3e-051
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -3 / +2
Query: 703 VRHRYPPARWISL*ASEDAVHHQSMAP*HQQPKWSNLLGHSERSVEPSPYLED 545
+RHR+PP RWISL*ASEDAV HQSMA *HQQPKWSNLLG+SERSVEPSPYLED
Sbjct: 305 LRHRHPPPRWISL*ASEDAVCHQSMAS*HQQPKWSNLLGYSERSVEPSPYLED 463
Score = 112 bits (239), Expect(3) = 8e-048
Identities = 49/55 (89%), Positives = 49/55 (89%)
Frame = -2 / +1
Query: 689 SACPVDIPLSLRRCSSSPKYGTLTSAAKMEQFAWTF*KISGAQPLP*RLLSFPFK 525
SA PVDIPLSLRRCS SPKYG LTSAAKMEQFAW F*KISGAQPLP*R SFPFK
Sbjct: 319 SASPVDIPLSLRRCSLSPKYGILTSAAKMEQFAWIF*KISGAQPLP*RRHSFPFK 483
Score = 64.8 bits (135), Expect(3) = 1e-087
Identities = 31/34 (91%), Positives = 31/34 (91%)
Frame = +2 / -2
Query: 383 SSMPVDALFAKASVQ*RAVAANVG*SRRYCWATT 484
SSMPVDALF KASVQ*RAVAANVG*SRRY ATT
Sbjct: 625 SSMPVDALFGKASVQ*RAVAANVG*SRRYGCATT 524
Score = 64.3 bits (134), Expect(4) = 3e-051
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -2 / +1
Query: 872 GIDRGWWTSRACRRSSPSATATGR 801
GIDRGWWTSRACRRSSPSATATGR
Sbjct: 136 GIDRGWWTSRACRRSSPSATATGR 207
Score = 62.0 bits (129), Expect(4) = 3e-051
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3 / +2
Query: 472 TVPA*LSNICRYGSLLDRGLCEECINGHGR 383
TVPA*LSNIC YGSLLDRGL +EC+N HGR
Sbjct: 536 TVPA*LSNICCYGSLLDRGLPKECVNWHGR 625
Score = 59.7 bits (124), Expect(3) = 8e-048
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3 / +2
Query: 868 SIEDGGRLARAEGAHRVQPRPGGI 797
SIEDGGRLARAEGAHRVQPRPGG+
Sbjct: 140 SIEDGGRLARAEGAHRVQPRPGGV 211
Score = 58.8 bits (122), Expect(3) = 8e-048
Identities = 24/30 (80%), Positives = 25/30 (83%)
Frame = -2 / +1
Query: 473 NSTCVTIQHLPLRLATGQRPLRRVHQRAWK 384
N TCVTIQHL LRLATGQRP +RV Q AWK
Sbjct: 535 NRTCVTIQHLLLRLATGQRPSQRVRQLAWK 624
Score = 43.2 bits (88), Expect(2) = 3e-064
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -1
Query: 796 RYLPVAVALGELLLHARDV 852
R+LPVAVALGELLLHARDV
Sbjct: 212 RHLPVAVALGELLLHARDV 156
Score = 41.8 bits (85), Expect(3) = 1e-087
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / -3
Query: 875 LPRGAAVTSSWLSSGAAR 928
LPRGAA TSSWLSSGAAR
Sbjct: 132 LPRGAAATSSWLSSGAAR 79
Score = 33.1 bits (66), Expect(2) = 4e-087
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 930 NRAAPEESQEEVTAAP 883
+RAAP+ESQEEV AAP
Sbjct: 77 HRAAPDESQEEVAAAP 124
Score = 21.7 bits (41), Expect(4) = 3e-051
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / +3
Query: 938 SPPIAPLPXXXXXXXXXXREEG 873
S PIAPLP REEG
Sbjct: 69 SHPIAPLPTRARRRWRRRREEG 134
>gb|AW744784.1|AW744784 LG1_384_C09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 556
Score = 291 bits (630), Expect(2) = 2e-081
Identities = 119/141 (84%), Positives = 120/141 (85%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP
Sbjct: 133 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 312
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PKMQF+TKVWHPNISSQNGAICLDILKDQW PDDPQDAVV
Sbjct: 313 PKMQFVTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAPDDPQDAVV 492
Query: 477 AQQYLRDYPTFAATARYWTEA 415
AQQYLRDYPTFAATARYWTEA
Sbjct: 493 AQQYLRDYPTFAATARYWTEA 555
Score = 258 bits (557), Expect(3) = 1e-082
Identities = 106/110 (96%), Positives = 108/110 (98%)
Frame = +2 / -3
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VFKVRAGLH*SFR+SKQIAPFWLLMLGCHTLV NCIFGGSKGYPPGRR+SMT VPPS*GL
Sbjct: 425 VFKVRAGLH*SFRISKQIAPFWLLMLGCHTLVTNCIFGGSKGYPPGRRMSMTKVPPS*GL 246
Query: 725 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 874
SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL
Sbjct: 245 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 96
Score = 215 bits (463), Expect(2) = 2e-061
Identities = 87/96 (90%), Positives = 92/96 (95%)
Frame = +1 / -2
Query: 415 GLCPVASRSGKCWIVTQVLLGNNSILRIIRCRRRKQSLKGKESSLQGKGWAPLIFQNVQA 594
GLCPVASRS KCWIVTQVLL NNSILRIIRCRRRKQSLKGKE LQGKGWAPLIFQN+QA
Sbjct: 555 GLCPVASRSSKCWIVTQVLLCNNSILRIIRCRRRKQSLKGKECRLQGKGWAPLIFQNIQA 376
Query: 595 NCSILAADVRVPYFGDELHLRRLKGISTGQADIDDE 702
NCSILAADVR+PYFGD+LHLRRLKGISTG+AD+DDE
Sbjct: 375 NCSILAADVRMPYFGDKLHLRRLKGISTGEADVDDE 268
Score = 185 bits (398), Expect = 1e-045
Identities = 82/89 (92%), Positives = 83/89 (93%)
Frame = +3 / -1
Query: 414 RPLSSSEP*RQMLDSHAGTVGQQQHPEDHQVQEKKAELEGKGEQSSR*GLGSTDLSECPS 593
RPLSSSEP*+QMLDSHAGTV QQQHPEDHQVQEKKAELEGKG SSR*GLGSTDLSE PS
Sbjct: 556 RPLSSSEP*QQMLDSHAGTVVQQQHPEDHQVQEKKAELEGKGVPSSR*GLGSTDLSEYPS 377
Query: 594 KLLHFGC*C*GAILW**TASSEAQRDIHR 680
KLLHFGC*C* AILW* TASSEAQRDIHR
Sbjct: 376 KLLHFGC*C*DAILW*QTASSEAQRDIHR 290
Score = 116 bits (247), Expect(4) = 6e-047
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -3 / +3
Query: 703 VRHRYPPARWISL*ASEDAVHHQSMAP*HQQPKWSNLLGHSERSVEPSPYLED 545
+RHR+PP RWISL*ASEDAV HQSMA *HQQPKWSNLLG+SERSVEPSPYLED
Sbjct: 267 LRHRHPPPRWISL*ASEDAVCHQSMAS*HQQPKWSNLLGYSERSVEPSPYLED 425
Score = 112 bits (239), Expect(3) = 5e-043
Identities = 49/55 (89%), Positives = 49/55 (89%)
Frame = -2 / +2
Query: 689 SACPVDIPLSLRRCSSSPKYGTLTSAAKMEQFAWTF*KISGAQPLP*RLLSFPFK 525
SA PVDIPLSLRRCS SPKYG LTSAAKMEQFAW F*KISGAQPLP*R SFPFK
Sbjct: 281 SASPVDIPLSLRRCSLSPKYGILTSAAKMEQFAWIF*KISGAQPLP*RRHSFPFK 445
Score = 64.3 bits (134), Expect(4) = 6e-047
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -2 / +2
Query: 872 GIDRGWWTSRACRRSSPSATATGR 801
GIDRGWWTSRACRRSSPSATATGR
Sbjct: 98 GIDRGWWTSRACRRSSPSATATGR 169
Score = 59.7 bits (124), Expect(3) = 5e-043
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3 / +3
Query: 868 SIEDGGRLARAEGAHRVQPRPGGI 797
SIEDGGRLARAEGAHRVQPRPGG+
Sbjct: 102 SIEDGGRLARAEGAHRVQPRPGGV 173
Score = 47.8 bits (98), Expect(3) = 1e-082
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +2 / -3
Query: 416 ASVQ*RAVAANVG*SRRYCWATT 484
ASVQ*RAVAANVG*SRRYC ATT
Sbjct: 554 ASVQ*RAVAANVG*SRRYCCATT 486
Score = 46.9 bits (96), Expect(4) = 6e-047
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = -2 / +2
Query: 473 NSTCVTIQHLPLRLATGQRP 414
NSTCVTIQHL LRLATGQRP
Sbjct: 497 NSTCVTIQHLLLRLATGQRP 556
Score = 43.2 bits (88), Expect(2) = 2e-061
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -2
Query: 796 RYLPVAVALGELLLHARDV 852
R+LPVAVALGELLLHARDV
Sbjct: 174 RHLPVAVALGELLLHARDV 118
Score = 42.8 bits (87), Expect(3) = 5e-043
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = -3 / +3
Query: 472 TVPA*LSNICRYGSLLDRG 416
TVPA*LSNIC YGSLLDRG
Sbjct: 498 TVPA*LSNICCYGSLLDRG 554
Score = 41.8 bits (85), Expect(3) = 1e-082
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / -1
Query: 875 LPRGAAVTSSWLSSGAAR 928
LPRGAA TSSWLSSGAAR
Sbjct: 94 LPRGAAATSSWLSSGAAR 41
Score = 33.1 bits (66), Expect(2) = 2e-081
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 930 NRAAPEESQEEVTAAP 883
+RAAP+ESQEEV AAP
Sbjct: 39 HRAAPDESQEEVAAAP 86
Score = 21.7 bits (41), Expect(4) = 6e-047
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / +1
Query: 938 SPPIAPLPXXXXXXXXXXREEG 873
S PIAPLP REEG
Sbjct: 31 SHPIAPLPTRARRRWRRRREEG 96
>gb|BE918962.1|BE918962 FM1_2_D02.b1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 549
Score = 289 bits (626), Expect(2) = 8e-081
Identities = 118/140 (84%), Positives = 119/140 (85%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP
Sbjct: 130 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 309
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PKMQF+TKVWHPNISSQNGAICLDILKDQW PDDPQDAVV
Sbjct: 310 PKMQFVTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAPDDPQDAVV 489
Query: 477 AQQYLRDYPTFAATARYWTE 418
AQQYLRDYPTFAATARYWTE
Sbjct: 490 AQQYLRDYPTFAATARYWTE 549
Score = 258 bits (557), Expect(3) = 5e-082
Identities = 106/110 (96%), Positives = 108/110 (98%)
Frame = +2 / -2
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VFKVRAGLH*SFR+SKQIAPFWLLMLGCHTLV NCIFGGSKGYPPGRR+SMT VPPS*GL
Sbjct: 422 VFKVRAGLH*SFRISKQIAPFWLLMLGCHTLVTNCIFGGSKGYPPGRRMSMTKVPPS*GL 243
Query: 725 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 874
SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL
Sbjct: 242 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 93
Score = 212 bits (457), Expect(2) = 1e-060
Identities = 86/95 (90%), Positives = 91/95 (95%)
Frame = +1 / -1
Query: 418 LCPVASRSGKCWIVTQVLLGNNSILRIIRCRRRKQSLKGKESSLQGKGWAPLIFQNVQAN 597
LCPVASRS KCWIVTQVLL NNSILRIIRCRRRKQSLKGKE LQGKGWAPLIFQN+QAN
Sbjct: 549 LCPVASRSSKCWIVTQVLLCNNSILRIIRCRRRKQSLKGKECRLQGKGWAPLIFQNIQAN 370
Query: 598 CSILAADVRVPYFGDELHLRRLKGISTGQADIDDE 702
CSILAADVR+PYFGD+LHLRRLKGISTG+AD+DDE
Sbjct: 369 CSILAADVRMPYFGDKLHLRRLKGISTGEADVDDE 265
Score = 179 bits (386), Expect = 5e-044
Identities = 80/87 (91%), Positives = 81/87 (93%)
Frame = +3 / -3
Query: 420 LSSSEP*RQMLDSHAGTVGQQQHPEDHQVQEKKAELEGKGEQSSR*GLGSTDLSECPSKL 599
LSSSEP*+QMLDSHAGTV QQQHPEDHQVQEKKAELEGKG SSR*GLGSTDLSE PSKL
Sbjct: 547 LSSSEP*QQMLDSHAGTVVQQQHPEDHQVQEKKAELEGKGVPSSR*GLGSTDLSEYPSKL 368
Query: 600 LHFGC*C*GAILW**TASSEAQRDIHR 680
LHFGC*C* AILW* TASSEAQRDIHR
Sbjct: 367 LHFGC*C*DAILW*QTASSEAQRDIHR 287
Score = 116 bits (247), Expect(4) = 2e-045
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -3 / +3
Query: 703 VRHRYPPARWISL*ASEDAVHHQSMAP*HQQPKWSNLLGHSERSVEPSPYLED 545
+RHR+PP RWISL*ASEDAV HQSMA *HQQPKWSNLLG+SERSVEPSPYLED
Sbjct: 264 LRHRHPPPRWISL*ASEDAVCHQSMAS*HQQPKWSNLLGYSERSVEPSPYLED 422
Score = 112 bits (239), Expect(3) = 3e-042
Identities = 49/55 (89%), Positives = 49/55 (89%)
Frame = -2 / +2
Query: 689 SACPVDIPLSLRRCSSSPKYGTLTSAAKMEQFAWTF*KISGAQPLP*RLLSFPFK 525
SA PVDIPLSLRRCS SPKYG LTSAAKMEQFAW F*KISGAQPLP*R SFPFK
Sbjct: 278 SASPVDIPLSLRRCSLSPKYGILTSAAKMEQFAWIF*KISGAQPLP*RRHSFPFK 442
Score = 64.3 bits (134), Expect(4) = 2e-045
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -2 / +2
Query: 872 GIDRGWWTSRACRRSSPSATATGR 801
GIDRGWWTSRACRRSSPSATATGR
Sbjct: 95 GIDRGWWTSRACRRSSPSATATGR 166
Score = 59.7 bits (124), Expect(3) = 3e-042
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3 / +3
Query: 868 SIEDGGRLARAEGAHRVQPRPGGI 797
SIEDGGRLARAEGAHRVQPRPGG+
Sbjct: 99 SIEDGGRLARAEGAHRVQPRPGGV 170
Score = 46.0 bits (94), Expect(3) = 5e-082
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +2 / -2
Query: 419 SVQ*RAVAANVG*SRRYCWATT 484
SVQ*RAVAANVG*SRRYC ATT
Sbjct: 548 SVQ*RAVAANVG*SRRYCCATT 483
Score = 43.2 bits (88), Expect(2) = 1e-060
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -1
Query: 796 RYLPVAVALGELLLHARDV 852
R+LPVAVALGELLLHARDV
Sbjct: 171 RHLPVAVALGELLLHARDV 115
Score = 41.8 bits (85), Expect(3) = 5e-082
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / -3
Query: 875 LPRGAAVTSSWLSSGAAR 928
LPRGAA TSSWLSSGAAR
Sbjct: 91 LPRGAAATSSWLSSGAAR 38
Score = 41.4 bits (84), Expect(4) = 2e-045
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -2 / +2
Query: 473 NSTCVTIQHLPLRLATGQ 420
NSTCVTIQHL LRLATGQ
Sbjct: 494 NSTCVTIQHLLLRLATGQ 547
Score = 40.0 bits (81), Expect(3) = 3e-042
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3 / +3
Query: 472 TVPA*LSNICRYGSLLDR 419
TVPA*LSNIC YGSLLDR
Sbjct: 495 TVPA*LSNICCYGSLLDR 548
Score = 33.1 bits (66), Expect(2) = 8e-081
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 930 NRAAPEESQEEVTAAP 883
+RAAP+ESQEEV AAP
Sbjct: 36 HRAAPDESQEEVAAAP 83
Score = 21.7 bits (41), Expect(4) = 2e-045
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / +1
Query: 938 SPPIAPLPXXXXXXXXXXREEG 873
S PIAPLP REEG
Sbjct: 28 SHPIAPLPTRARRRWRRRREEG 93
>gb|AW744816.1|AW744816 LG1_384_C09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 589
Score = 280 bits (606), Expect(3) = 4e-080
Identities = 116/132 (87%), Positives = 123/132 (93%)
Frame = +1 / -2
Query: 277 RAELFESHVLVAIHALQGTSHLILWEAHLNQLLHLLFHAR*CTLRKGLCPVASRSGKCWI 456
RAELF+SHVL+AIH LQGTSH +LWEAHLNQLLHLLFHA * TL +GLCPVASRS KCWI
Sbjct: 396 RAELFKSHVLIAIHTLQGTSHQVLWEAHLNQLLHLLFHAS*RTLCEGLCPVASRSSKCWI 217
Query: 457 VTQVLLGNNSILRIIRCRRRKQSLKGKESSLQGKGWAPLIFQNVQANCSILAADVRVPYF 636
VTQVLL NNSILRIIRCRRRKQSLKGKE LQGKGWAPLIFQN+QANCSILAADVR+PYF
Sbjct: 216 VTQVLLCNNSILRIIRCRRRKQSLKGKECRLQGKGWAPLIFQNIQANCSILAADVRMPYF 37
Query: 637 GDELHLRRLKGI 672
GD+LHLRRLKGI
Sbjct: 36 GDKLHLRRLKGI 1
Score = 261 bits (565), Expect(3) = 1e-075
Identities = 109/133 (81%), Positives = 110/133 (82%)
Frame = -1 / +1
Query: 672 YPFEPPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDP 493
YPFEPPKMQF+TKVWHPNISSQNGAICLDILKDQW PDDP
Sbjct: 1 YPFEPPKMQFVTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAPDDP 180
Query: 492 QDAVVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDQVRSALKSVD 313
QDAVVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPED VRS LKSVD
Sbjct: 181 QDAVVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDLVRSTLKSVD 360
Query: 312 GDENMALEKLCSG 274
GDENMALEKLCSG
Sbjct: 361 GDENMALEKLCSG 399
Score = 182 bits (392), Expect(3) = 6e-056
Identities = 81/90 (90%), Positives = 83/90 (92%)
Frame = +3 / -1
Query: 402 HSSQRPLSSSEP*RQMLDSHAGTVGQQQHPEDHQVQEKKAELEGKGEQSSR*GLGSTDLS 581
HS +RPLSSSEP*+QMLDSHAGTV QQQHPEDHQVQEKKAELEGKG SSR*GLGSTDLS
Sbjct: 271 HSLRRPLSSSEP*QQMLDSHAGTVVQQQHPEDHQVQEKKAELEGKGVPSSR*GLGSTDLS 92
Query: 582 ECPSKLLHFGC*C*GAILW**TASSEAQRD 671
E PSKLLHFGC*C* AILW* TASSEAQRD
Sbjct: 91 EYPSKLLHFGC*C*DAILW*QTASSEAQRD 2
Score = 149 bits (319), Expect(4) = 4e-064
Identities = 67/70 (95%), Positives = 67/70 (95%)
Frame = +2 / -3
Query: 275 PEQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSSMPVDALFAKASVQ*RAVAANVG 454
PEQSFSRAMFSSPSTLFR LLT SSGKPISTSFCTFSSMPVDALFAKASVQ*RAVAANVG
Sbjct: 398 PEQSFSRAMFSSPSTLFRVLLTRSSGKPISTSFCTFSSMPVDALFAKASVQ*RAVAANVG 219
Query: 455 *SRRYCWATT 484
*SRRYC ATT
Sbjct: 218 *SRRYCCATT 189
Score = 134 bits (287), Expect(4) = 1e-060
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = -3 / +3
Query: 472 TVPA*LSNICRYGSLLDRGLCEECINGHGREGAEAG*DGLPRGSGEKCPEERGWRREHGS 293
TVPA*LSNIC YGSLLDRGL +EC+N HGREGAEAG*DGLPRG GEK PEE GWR EHGS
Sbjct: 201 TVPA*LSNICCYGSLLDRGLRKECVNWHGREGAEAG*DGLPRGPGEKYPEECGWR*EHGS 380
Query: 292 RKALLWL 272
KALLW+
Sbjct: 381 *KALLWV 401
Score = 133 bits (286), Expect(3) = 1e-052
Identities = 56/66 (84%), Positives = 57/66 (86%)
Frame = -2 / +2
Query: 473 NSTCVTIQHLPLRLATGQRPLRRVHQRAWKRRCRSWLRWASQRIR*EVP*RAWMATRTWL 294
NSTCVTIQHL LRLATGQRP +RV Q AWKRRCRSWLRWASQR *EVP*R WMA RTWL
Sbjct: 200 NSTCVTIQHLLLRLATGQRPSQRVRQLAWKRRCRSWLRWASQRTW*EVP*RVWMAMRTWL 379
Query: 293 SKSSAL 276
KSSAL
Sbjct: 380 LKSSAL 397
Score = 101 bits (215), Expect(4) = 1e-060
Identities = 44/49 (89%), Positives = 44/49 (89%)
Frame = -2 / +2
Query: 671 IPLSLRRCSSSPKYGTLTSAAKMEQFAWTF*KISGAQPLP*RLLSFPFK 525
IPLSLRRCS SPKYG LTSAAKMEQFAW F*KISGAQPLP*R SFPFK
Sbjct: 2 IPLSLRRCSLSPKYGILTSAAKMEQFAWIF*KISGAQPLP*RRHSFPFK 148
Score = 100 bits (213), Expect(4) = 4e-064
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +2 / -3
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKG 670
VFKVRAGLH*SFR+SKQIAPFWLLMLGCHTLV NCIFGGSKG
Sbjct: 128 VFKVRAGLH*SFRISKQIAPFWLLMLGCHTLVTNCIFGGSKG 3
Score = 91.3 bits (193), Expect(3) = 1e-052
Identities = 39/42 (92%), Positives = 40/42 (95%)
Frame = -3 / +3
Query: 670 SL*ASEDAVHHQSMAP*HQQPKWSNLLGHSERSVEPSPYLED 545
SL*ASEDAV HQSMA *HQQPKWSNLLG+SERSVEPSPYLED
Sbjct: 3 SL*ASEDAVCHQSMAS*HQQPKWSNLLGYSERSVEPSPYLED 128
Score = 50.6 bits (104), Expect(3) = 6e-056
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3 / -1
Query: 273 SQSRAFREPCSRRHPRSSGHFSP 341
+QSRAF+EPCS RHP SSG+FSP
Sbjct: 400 TQSRAFQEPCSHRHPHSSGYFSP 332
Score = 32.7 bits (65), Expect(3) = 4e-080
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / -2
Query: 128 NECCPRRVSLQSHGPWH 178
NE R+SL+SHGPWH
Sbjct: 588 NEL*RSRISLESHGPWH 538
Score = 31.8 bits (63), Expect(3) = 1e-075
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -3 / +1
Query: 178 VPWPMGLE*DSPRTTFV 128
VPWPMGLE*+S + FV
Sbjct: 538 VPWPMGLE*NSTSSEFV 588
Score = 30.9 bits (61), Expect(3) = 1e-075
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / +1
Query: 223 TVPANAPAQPFHIG 182
T+PANAPAQPF G
Sbjct: 463 TMPANAPAQPFQCG 504
Score = 29.5 bits (58), Expect(4) = 1e-060
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / +2
Query: 225 SQCLLMLLLSHF 190
+QCLLMLLLSHF
Sbjct: 461 TQCLLMLLLSHF 496
Score = 29.0 bits (57), Expect(4) = 4e-064
Identities = 12/17 (70%), Positives = 12/17 (70%)
Frame = +3 / -3
Query: 129 TNVVLGESHSSPMGHGT 179
TN E HSSPMGHGT
Sbjct: 587 TNSEEVEFHSSPMGHGT 537
Score = 28.6 bits (56), Expect(3) = 6e-056
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / -1
Query: 127 KRMLS*ESLTPVPWAMARP 183
+R L + T VPWAMARP
Sbjct: 589 ERTLKKSNFTRVPWAMARP 533
Score = 27.2 bits (53), Expect(4) = 1e-060
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +2
Query: 177 CHGPWDWSE 151
CHGPWD SE
Sbjct: 539 CHGPWDSSE 565
Score = 26.3 bits (51), Expect(3) = 4e-080
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -1
Query: 190 EMAEQEH*QAL 222
EMAEQEH*QAL
Sbjct: 496 EMAEQEH*QAL 464
Score = 25.4 bits (49), Expect(4) = 4e-064
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / -3
Query: 183 PI*NG*AGALAGTV 224
P *NG*AGALAG V
Sbjct: 503 PH*NG*AGALAGIV 462
Score = 24.9 bits (48), Expect(3) = 1e-052
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +3
Query: 182 GRAMAHGTGVRLS*DNIR 129
GRAMAHGT V+ +R
Sbjct: 534 GRAMAHGTRVKFDFFRVR 587
>gb|BE918818.1|BE918818 FM1_2_D02.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 605
Score = 273 bits (591), Expect(3) = 2e-078
Identities = 113/129 (87%), Positives = 120/129 (93%)
Frame = +1 / -1
Query: 277 RAELFESHVLVAIHALQGTSHLILWEAHLNQLLHLLFHAR*CTLRKGLCPVASRSGKCWI 456
RAELF+SHVL+AIH LQGTSH +LWEAHLNQLLHLLFHA * TL +GLCPVASRS KCWI
Sbjct: 389 RAELFKSHVLIAIHTLQGTSHQVLWEAHLNQLLHLLFHAS*RTLCEGLCPVASRSSKCWI 210
Query: 457 VTQVLLGNNSILRIIRCRRRKQSLKGKESSLQGKGWAPLIFQNVQANCSILAADVRVPYF 636
VTQVLL NNSILRIIRCRRRKQSLKGKE LQGKGWAPLIFQN+QANCSILAADVR+PYF
Sbjct: 209 VTQVLLCNNSILRIIRCRRRKQSLKGKECRLQGKGWAPLIFQNIQANCSILAADVRMPYF 30
Query: 637 GDELHLRRL 663
GD+LHLRRL
Sbjct: 29 GDKLHLRRL 3
Score = 252 bits (545), Expect(3) = 5e-073
Identities = 106/130 (81%), Positives = 107/130 (82%)
Frame = -1 / +3
Query: 663 EPPKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDA 484
EPPKMQF+TKVWHPNISSQNGAICLDILKDQW PDDPQDA
Sbjct: 3 EPPKMQFVTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAPDDPQDA 182
Query: 483 VVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDQVRSALKSVDGDE 304
VVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPED VRS LKSVDGDE
Sbjct: 183 VVAQQYLRDYPTFAATARYWTEAFAKSASTGMEEKVQKLVEMGFPEDLVRSTLKSVDGDE 362
Query: 303 NMALEKLCSG 274
NMALEKLCSG
Sbjct: 363 NMALEKLCSG 392
Score = 177 bits (381), Expect(3) = 2e-054
Identities = 79/88 (89%), Positives = 81/88 (92%)
Frame = +3 / -3
Query: 402 HSSQRPLSSSEP*RQMLDSHAGTVGQQQHPEDHQVQEKKAELEGKGEQSSR*GLGSTDLS 581
HS +RPLSSSEP*+QMLDSHAGTV QQQHPEDHQVQEKKAELEGKG SSR*GLGSTDLS
Sbjct: 264 HSLRRPLSSSEP*QQMLDSHAGTVVQQQHPEDHQVQEKKAELEGKGVPSSR*GLGSTDLS 85
Query: 582 ECPSKLLHFGC*C*GAILW**TASSEAQ 665
E PSKLLHFGC*C* AILW* TASSEAQ
Sbjct: 84 EYPSKLLHFGC*C*DAILW*QTASSEAQ 1
Score = 149 bits (319), Expect(4) = 1e-063
Identities = 67/70 (95%), Positives = 67/70 (95%)
Frame = +2 / -2
Query: 275 PEQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSSMPVDALFAKASVQ*RAVAANVG 454
PEQSFSRAMFSSPSTLFR LLT SSGKPISTSFCTFSSMPVDALFAKASVQ*RAVAANVG
Sbjct: 391 PEQSFSRAMFSSPSTLFRVLLTRSSGKPISTSFCTFSSMPVDALFAKASVQ*RAVAANVG 212
Query: 455 *SRRYCWATT 484
*SRRYC ATT
Sbjct: 211 *SRRYCCATT 182
Score = 134 bits (287), Expect(4) = 3e-059
Identities = 56/67 (83%), Positives = 59/67 (88%)
Frame = -3 / +2
Query: 472 TVPA*LSNICRYGSLLDRGLCEECINGHGREGAEAG*DGLPRGSGEKCPEERGWRREHGS 293
TVPA*LSNIC YGSLLDRGL +EC+N HGREGAEAG*DGLPRG GEK PEE GWR EHGS
Sbjct: 194 TVPA*LSNICCYGSLLDRGLRKECVNWHGREGAEAG*DGLPRGPGEKYPEECGWR*EHGS 373
Query: 292 RKALLWL 272
KALLW+
Sbjct: 374 *KALLWV 394
Score = 133 bits (286), Expect(3) = 2e-051
Identities = 56/66 (84%), Positives = 57/66 (86%)
Frame = -2 / +1
Query: 473 NSTCVTIQHLPLRLATGQRPLRRVHQRAWKRRCRSWLRWASQRIR*EVP*RAWMATRTWL 294
NSTCVTIQHL LRLATGQRP +RV Q AWKRRCRSWLRWASQR *EVP*R WMA RTWL
Sbjct: 193 NSTCVTIQHLLLRLATGQRPSQRVRQLAWKRRCRSWLRWASQRTW*EVP*RVWMAMRTWL 372
Query: 293 SKSSAL 276
KSSAL
Sbjct: 373 LKSSAL 390
Score = 96.4 bits (204), Expect(4) = 3e-059
Identities = 42/47 (89%), Positives = 42/47 (89%)
Frame = -2 / +1
Query: 665 LSLRRCSSSPKYGTLTSAAKMEQFAWTF*KISGAQPLP*RLLSFPFK 525
LSLRRCS SPKYG LTSAAKMEQFAW F*KISGAQPLP*R SFPFK
Sbjct: 1 LSLRRCSLSPKYGILTSAAKMEQFAWIF*KISGAQPLP*RRHSFPFK 141
Score = 95.5 bits (202), Expect(4) = 1e-063
Identities = 38/40 (95%), Positives = 39/40 (97%)
Frame = +2 / -2
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGS 664
VFKVRAGLH*SFR+SKQIAPFWLLMLGCHTLV NCIFGGS
Sbjct: 121 VFKVRAGLH*SFRISKQIAPFWLLMLGCHTLVTNCIFGGS 2
Score = 87.7 bits (185), Expect(3) = 2e-051
Identities = 37/40 (92%), Positives = 38/40 (95%)
Frame = -3 / +2
Query: 664 *ASEDAVHHQSMAP*HQQPKWSNLLGHSERSVEPSPYLED 545
*ASEDAV HQSMA *HQQPKWSNLLG+SERSVEPSPYLED
Sbjct: 2 *ASEDAVCHQSMAS*HQQPKWSNLLGYSERSVEPSPYLED 121
Score = 50.6 bits (104), Expect(3) = 2e-054
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3 / -3
Query: 273 SQSRAFREPCSRRHPRSSGHFSP 341
+QSRAF+EPCS RHP SSG+FSP
Sbjct: 393 TQSRAFQEPCSHRHPHSSGYFSP 325
Score = 33.6 bits (67), Expect(3) = 2e-078
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3 / -2
Query: 114 KEFKETNVVLGESHSSPMGHGT 179
K+ K TN E HSSPMGHGT
Sbjct: 595 KQTKRTNSEEVEFHSSPMGHGT 530
Score = 32.7 bits (65), Expect(4) = 1e-063
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / -1
Query: 128 NECCPRRVSLQSHGPWH 178
NE R+SL+SHGPWH
Sbjct: 581 NEL*RSRISLESHGPWH 531
Score = 32.2 bits (64), Expect(3) = 5e-073
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = -3 / +3
Query: 178 VPWPMGLE*DSPRTTFVSLNSF 113
VPWPMGLE*+S + FV F
Sbjct: 531 VPWPMGLE*NSTSSEFVRFVCF 596
Score = 30.9 bits (61), Expect(3) = 5e-073
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / +3
Query: 223 TVPANAPAQPFHIG 182
T+PANAPAQPF G
Sbjct: 456 TMPANAPAQPFQCG 497
Score = 29.5 bits (58), Expect(4) = 3e-059
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 225 SQCLLMLLLSHF 190
+QCLLMLLLSHF
Sbjct: 454 TQCLLMLLLSHF 489
Score = 28.6 bits (56), Expect(3) = 2e-054
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / -3
Query: 127 KRMLS*ESLTPVPWAMARP 183
+R L + T VPWAMARP
Sbjct: 582 ERTLKKSNFTRVPWAMARP 526
Score = 27.2 bits (53), Expect(4) = 3e-059
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 177 CHGPWDWSE 151
CHGPWD SE
Sbjct: 532 CHGPWDSSE 558
Score = 26.3 bits (51), Expect(3) = 2e-078
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -3
Query: 190 EMAEQEH*QAL 222
EMAEQEH*QAL
Sbjct: 489 EMAEQEH*QAL 457
Score = 25.4 bits (49), Expect(4) = 1e-063
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / -2
Query: 183 PI*NG*AGALAGTV 224
P *NG*AGALAG V
Sbjct: 496 PH*NG*AGALAGIV 455
Score = 24.9 bits (48), Expect(3) = 2e-051
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 182 GRAMAHGTGVRLS*DNIR 129
GRAMAHGT V+ +R
Sbjct: 527 GRAMAHGTRVKFDFFRVR 580
>gb|BG947288.1|BG947288 IP1_3_G03.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 519
Score = 258 bits (557), Expect(3) = 7e-076
Identities = 106/110 (96%), Positives = 108/110 (98%)
Frame = +2 / -3
Query: 545 VFKVRAGLH*SFRMSKQIAPFWLLMLGCHTLVMNCIFGGSKGYPPGRRISMTNVPPS*GL 724
VFKVRAGLH*SFR+SKQIAPFWLLMLGCHTLV NCIFGGSKGYPPGRR+SMT VPPS*GL
Sbjct: 430 VFKVRAGLH*SFRISKQIAPFWLLMLGCHTLVTNCIFGGSKGYPPGRRMSMTKVPPS*GL 251
Query: 725 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 874
SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL
Sbjct: 250 SAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 101
Score = 237 bits (513), Expect(2) = 3e-065
Identities = 98/121 (80%), Positives = 99/121 (81%)
Frame = -1 / +3
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP
Sbjct: 138 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 317
Query: 657 PKMQFITKVWHPNISSQNGAICLDILKDQWXXXXXXXXXXXXXXXXXXXXXPDDPQDAVV 478
PKMQF+TKVWHPNISSQNGAICLDILKDQW PDDP DAVV
Sbjct: 318 PKMQFVTKVWHPNISSQNGAICLDILKDQWSPALTLKTALLSLQALLSSPAPDDPXDAVV 497
Query: 477 A 475
A
Sbjct: 498 A 500
Score = 170 bits (366), Expect(3) = 3e-049
Identities = 68/77 (88%), Positives = 74/77 (96%)
Frame = +1 / -2
Query: 472 LGNNSILRIIRCRRRKQSLKGKESSLQGKGWAPLIFQNVQANCSILAADVRVPYFGDELH 651
+GNNSI RIIRCRRRKQSLKGKE LQGKGWAPLIFQN+QANCSILAADVR+PYFGD+LH
Sbjct: 503 VGNNSIXRIIRCRRRKQSLKGKECRLQGKGWAPLIFQNIQANCSILAADVRMPYFGDKLH 324
Query: 652 LRRLKGISTGQADIDDE 702
LRRLKGISTG+AD+DDE
Sbjct: 323 LRRLKGISTGEADVDDE 273
Score = 139 bits (299), Expect = 5e-032
Identities = 62/68 (91%), Positives = 62/68 (91%)
Frame = +3 / -1
Query: 477 QQQHPEDHQVQEKKAELEGKGEQSSR*GLGSTDLSECPSKLLHFGC*C*GAILW**TASS 656
QQQH EDHQVQEKKAELEGKG SSR*GLGSTDLSE PSKLLHFGC*C* AILW* TASS
Sbjct: 498 QQQHXEDHQVQEKKAELEGKGVPSSR*GLGSTDLSEYPSKLLHFGC*C*DAILW*QTASS 319
Query: 657 EAQRDIHR 680
EAQRDIHR
Sbjct: 318 EAQRDIHR 295
Score = 116 bits (247), Expect(3) = 2e-038
Identities = 47/53 (88%), Positives = 50/53 (94%)
Frame = -3 / +2
Query: 703 VRHRYPPARWISL*ASEDAVHHQSMAP*HQQPKWSNLLGHSERSVEPSPYLED 545
+RHR+PP RWISL*ASEDAV HQSMA *HQQPKWSNLLG+SERSVEPSPYLED
Sbjct: 272 LRHRHPPPRWISL*ASEDAVCHQSMAS*HQQPKWSNLLGYSERSVEPSPYLED 430
Score = 112 bits (239), Expect(2) = 9e-036
Identities = 49/55 (89%), Positives = 49/55 (89%)
Frame = -2 / +1
Query: 689 SACPVDIPLSLRRCSSSPKYGTLTSAAKMEQFAWTF*KISGAQPLP*RLLSFPFK 525
SA PVDIPLSLRRCS SPKYG LTSAAKMEQFAW F*KISGAQPLP*R SFPFK
Sbjct: 286 SASPVDIPLSLRRCSLSPKYGILTSAAKMEQFAWIF*KISGAQPLP*RRHSFPFK 450
Score = 64.3 bits (134), Expect(3) = 2e-038
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = -2 / +1
Query: 872 GIDRGWWTSRACRRSSPSATATGR 801
GIDRGWWTSRACRRSSPSATATGR
Sbjct: 103 GIDRGWWTSRACRRSSPSATATGR 174
Score = 59.7 bits (124), Expect(2) = 9e-036
Identities = 23/24 (95%), Positives = 24/24 (100%)
Frame = -3 / +2
Query: 868 SIEDGGRLARAEGAHRVQPRPGGI 797
SIEDGGRLARAEGAHRVQPRPGG+
Sbjct: 107 SIEDGGRLARAEGAHRVQPRPGGV 178
Score = 43.2 bits (88), Expect(3) = 3e-049
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +1 / -2
Query: 796 RYLPVAVALGELLLHARDV 852
R+LPVAVALGELLLHARDV
Sbjct: 179 RHLPVAVALGELLLHARDV 123
Score = 41.8 bits (85), Expect(3) = 7e-076
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / -1
Query: 875 LPRGAAVTSSWLSSGAAR 928
LPRGAA TSSWLSSGAAR
Sbjct: 99 LPRGAAATSSWLSSGAAR 46
Score = 33.1 bits (66), Expect(2) = 3e-065
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +2
Query: 930 NRAAPEESQEEVTAAP 883
+RAAP+ESQEEV AAP
Sbjct: 44 HRAAPDESQEEVAAAP 91
Score = 25.4 bits (49), Expect(3) = 7e-076
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3 / -2
Query: 456 SHAGTVGQQQHPEDHQVQEKKAELEGK 536
SHAGTVG + + +K L+GK
Sbjct: 518 SHAGTVGNNSIXRIIRCRRRKQSLKGK 438
Score = 22.1 bits (42), Expect(3) = 3e-049
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2 / -1
Query: 455 *SRRYCW 475
*SRRYCW
Sbjct: 519 *SRRYCW 499
Score = 21.7 bits (41), Expect(3) = 2e-038
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2 / +3
Query: 938 SPPIAPLPXXXXXXXXXXREEG 873
S PIAPLP REEG
Sbjct: 36 SHPIAPLPTRARRRWRRRREEG 101
>gb|BI139854.1|BI139854 IP1_46_D07.b1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 306
Score = 168 bits (362), Expect(2) = 3e-047
Identities = 69/72 (95%), Positives = 71/72 (98%)
Frame = +2 / -2
Query: 659 GSKGYPPGRRISMTNVPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC 838
GSKGYPPGRR+SMT VPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC
Sbjct: 305 GSKGYPPGRRMSMTKVPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC 126
Query: 839 TRETSTILDRSL 874
TRETSTI+DRSL
Sbjct: 125 TRETSTIVDRSL 90
Score = 149 bits (320), Expect(2) = 7e-039
Identities = 60/60 (100%), Positives = 60/60 (100%)
Frame = -1 / +1
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP
Sbjct: 127 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 306
Score = 41.8 bits (85), Expect(2) = 3e-047
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / -3
Query: 875 LPRGAAVTSSWLSSGAAR 928
LPRGAA TSSWLSSGAAR
Sbjct: 88 LPRGAAATSSWLSSGAAR 35
Score = 33.1 bits (66), Expect(2) = 7e-039
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +3
Query: 930 NRAAPEESQEEVTAAP 883
+RAAP+ESQEEV AAP
Sbjct: 33 HRAAPDESQEEVAAAP 80
>gb|CW284518.1|CW284518 104_761_11409830_148_35496_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11409830, DNA
sequence
Length = 588
Score = 159 bits (342), Expect(2) = 2e-044
Identities = 67/72 (93%), Positives = 68/72 (94%)
Frame = +2 / -1
Query: 659 GSKGYPPGRRISMTNVPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC 838
GS G PGRR+SMT VPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC
Sbjct: 534 GSAGCSPGRRMSMTKVPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC 355
Query: 839 TRETSTILDRSL 874
TRETSTILDRSL
Sbjct: 354 TRETSTILDRSL 319
Score = 137 bits (293), Expect(2) = 3e-035
Identities = 56/60 (93%), Positives = 57/60 (95%)
Frame = -1 / +2
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPG P +P
Sbjct: 356 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGEQPADP 535
Score = 41.8 bits (85), Expect(2) = 2e-044
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +2 / -2
Query: 875 LPRGAAVTSSWLSSGAAR 928
LPRGAA TSSWLSSGAAR
Sbjct: 317 LPRGAAATSSWLSSGAAR 264
Score = 33.1 bits (66), Expect(2) = 3e-035
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +1
Query: 930 NRAAPEESQEEVTAAP 883
+RAAP+ESQEEV AAP
Sbjct: 262 HRAAPDESQEEVAAAP 309
>gb|CW123334.1|CW123334 104_502_11111159_116_34687_086 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11111159, DNA
sequence
Length = 460
Score = 159 bits (342), Expect(2) = 2e-041
Identities = 67/72 (93%), Positives = 68/72 (94%)
Frame = +2 / +2
Query: 659 GSKGYPPGRRISMTNVPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC 838
GS G PGRR+SMT VPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC
Sbjct: 203 GSAGCSPGRRMSMTKVPPS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFC 382
Query: 839 TRETSTILDRSL 874
TRETSTILDRSL
Sbjct: 383 TRETSTILDRSL 418
Score = 137 bits (293), Expect(2) = 2e-032
Identities = 56/60 (93%), Positives = 57/60 (95%)
Frame = -1 / -2
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEP 658
QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPG P +P
Sbjct: 381 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEGGTFVIDIRLPGEQPADP 202
Score = 31.3 bits (62), Expect(2) = 2e-041
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / +3
Query: 875 LPRGAAVTSSWLS 913
LPRGAA TSSWLS
Sbjct: 420 LPRGAAATSSWLS 458
Score = 23.5 bits (45), Expect(2) = 2e-032
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / -1
Query: 915 EESQEEVTAAP 883
+ESQEEV AAP
Sbjct: 460 DESQEEVAAAP 428
>gb|BG947201.1|BG947201 IP1_3_G03.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 508
Score = 105 bits (223), Expect(5) = 1e-038
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = -1 / +3
Query: 414 FAKSASTGMEEKVQKLVEMGFPEDQVRSALKSVDGDENMALEKLCSG 274
FAKSASTGMEEKVQKLVEMGFPED VRS LKSVDGDENMALEKLCSG
Sbjct: 3 FAKSASTGMEEKVQKLVEMGFPEDLVRSTLKSVDGDENMALEKLCSG 143
Score = 104 bits (221), Expect(4) = 1e-038
Identities = 45/47 (95%), Positives = 45/47 (95%)
Frame = +2 / -1
Query: 275 PEQSFSRAMFSSPSTLFRALLT*SSGKPISTSFCTFSSMPVDALFAK 415
PEQSFSRAMFSSPSTLFR LLT SSGKPISTSFCTFSSMPVDALFAK
Sbjct: 142 PEQSFSRAMFSSPSTLFRVLLTRSSGKPISTSFCTFSSMPVDALFAK 2
Score = 100 bits (212), Expect(4) = 7e-032
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = -3 / +2
Query: 415 LCEECINGHGREGAEAG*DGLPRGSGEKCPEERGWRREHGSRKALLWL 272
LC+EC+N HGREGAEAG*DGLPRG GEK PEE GWR EHGS KALLW+
Sbjct: 2 LCKECVNWHGREGAEAG*DGLPRGPGEKYPEECGWR*EHGS*KALLWV 145
Score = 95.9 bits (203), Expect(3) = 1e-024
Identities = 39/47 (82%), Positives = 40/47 (85%)
Frame = -2 / +1
Query: 416 PLRRVHQRAWKRRCRSWLRWASQRIR*EVP*RAWMATRTWLSKSSAL 276
PL+RV Q AWKRRCRSWLRWASQR *EVP*R WMA RTWL KSSAL
Sbjct: 1 PLQRVRQLAWKRRCRSWLRWASQRTW*EVP*RVWMAMRTWLLKSSAL 141
Score = 91.8 bits (194), Expect(4) = 1e-031
Identities = 38/46 (82%), Positives = 41/46 (89%)
Frame = +1 / -3
Query: 277 RAELFESHVLVAIHALQGTSHLILWEAHLNQLLHLLFHAR*CTLRK 414
RAELF+SHVL+AIH LQGTSH +LWEAHLNQLLHLLFHA * TL K
Sbjct: 140 RAELFKSHVLIAIHTLQGTSHQVLWEAHLNQLLHLLFHAS*RTLCK 3
Score = 53.8 bits (111), Expect(4) = 1e-038
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = +1 / -3
Query: 28 YVNLMFPLHQILPGFHGPRVDSAYQTQQQKSLKKR 132
YVNLMF LHQILP FHG RVD + Q++ L+KR
Sbjct: 452 YVNLMFLLHQILPEFHGQRVDDSGYQTQKQKLRKR 348
Score = 44.1 bits (90), Expect(4) = 1e-031
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = +3 / -2
Query: 27 LCQPHVSFASDITRVPWSKS 86
LCQ VSFASDITRVPW+KS
Sbjct: 453 LCQSDVSFASDITRVPWAKS 394
Score = 40.9 bits (83), Expect(5) = 1e-038
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / +1
Query: 89 STLGPWNPGNI*CKGNMRLT 30
STL PWN GNI*CK N+RLT
Sbjct: 391 STLCPWNSGNI*CKRNIRLT 450
Score = 37.7 bits (76), Expect(4) = 7e-032
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -1 / +3
Query: 90 IDSWTMEPW*YLMQRKHEVDI 28
I+S ME W*YLMQ+KH++DI
Sbjct: 390 INSLPMELW*YLMQKKHQIDI 452
Score = 34.1 bits (68), Expect(3) = 1e-024
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = -3 / +2
Query: 91 NRLLDHGTLVISDAKET*G*H 29
++L HGTLVISDAKET *H
Sbjct: 389 HQLFAHGTLVISDAKETSD*H 451
Score = 33.6 bits (67), Expect(4) = 1e-038
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +3 / -1
Query: 114 KEFKETNVVLGESHSSPMGHGT 179
K+ K TN E HSSPMGHGT
Sbjct: 346 KQTKRTNSEEVEFHSSPMGHGT 281
Score = 32.7 bits (65), Expect(5) = 1e-038
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3 / +3
Query: 178 VPWPMGLE*DSPRTTFVSLNSFA 110
VPWPMGLE*+S + FV F+
Sbjct: 282 VPWPMGLE*NSTSSEFVRFVCFS 350
Score = 32.7 bits (65), Expect(4) = 1e-031
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +2 / -3
Query: 128 NECCPRRVSLQSHGPWH 178
NE R+SL+SHGPWH
Sbjct: 332 NEL*RSRISLESHGPWH 282
Score = 30.9 bits (61), Expect(5) = 1e-038
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / +3
Query: 223 TVPANAPAQPFHIG 182
T+PANAPAQPF G
Sbjct: 207 TMPANAPAQPFQCG 248
Score = 29.5 bits (58), Expect(4) = 7e-032
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = -1 / +1
Query: 225 SQCLLMLLLSHF 190
+QCLLMLLLSHF
Sbjct: 205 TQCLLMLLLSHF 240
Score = 27.2 bits (53), Expect(4) = 7e-032
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1 / +1
Query: 177 CHGPWDWSE 151
CHGPWD SE
Sbjct: 283 CHGPWDSSE 309
Score = 26.3 bits (51), Expect(4) = 1e-038
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1 / -2
Query: 190 EMAEQEH*QAL 222
EMAEQEH*QAL
Sbjct: 240 EMAEQEH*QAL 208
Score = 25.4 bits (49), Expect(4) = 1e-031
Identities = 12/14 (85%), Positives = 12/14 (85%)
Frame = +3 / -1
Query: 183 PI*NG*AGALAGTV 224
P *NG*AGALAG V
Sbjct: 247 PH*NG*AGALAGIV 206
Score = 24.9 bits (48), Expect(5) = 1e-038
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2 / +1
Query: 125 FKLFCCCVW*AEST 84
F FC CVW* ES+
Sbjct: 352 FLNFCFCVW*PESS 393
Score = 24.9 bits (48), Expect(3) = 1e-024
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2 / +2
Query: 182 GRAMAHGTGVRLS*DNIR 129
GRAMAHGT V+ +R
Sbjct: 278 GRAMAHGTRVKFDFFRVR 331
>gb|BZ412886.1|BZ412886 165d4_ctg1 Subclones from BAC clones mapped to Sorghum bicolor
chromosome 3 Sorghum bicolor genomic clone 165d4, DNA
sequence
Length = 659
Score = 116 bits (247), Expect(3) = 5e-038
Identities = 48/55 (87%), Positives = 49/55 (89%)
Frame = +2 / -3
Query: 710 PS*GLSAGPAMVPVRWEMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 874
P G PAMVPVRW+MLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL
Sbjct: 456 PCRGCQRAPAMVPVRWKMLAPSWSAMETPDTSRSRLHSVSSFCTRETSTILDRSL 292
Score = 85.8 bits (181), Expect(3) = 3e-028
Identities = 36/43 (83%), Positives = 37/43 (86%)
Frame = -1 / +2
Query: 837 QKELTECNRDREVSGVSIALHDGANISHLTGTIAGPADSPYEG 709
QKELTECNRDREVSGVSIALHDGANI HLTGTIAG P +G
Sbjct: 329 QKELTECNRDREVSGVSIALHDGANIFHLTGTIAGAR*QPLQG 457
Score = 45.5 bits (93), Expect(3) = 3e-028
Identities = 17/20 (85%), Positives = 18/20 (90%)
Frame = -1 / +3
Query: 735 GPADSPYEGGTFVIDIRLPG 676
GPADSPY+GG VIDIRLPG
Sbjct: 432 GPADSPYKGGDLVIDIRLPG 491
Score = 42.8 bits (87), Expect(3) = 5e-038
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2 / -2
Query: 659 GSKGYPPGRRISMTNVPPS*GLSAGP 736
GS+ PGRR+SMT PP *GLSAGP
Sbjct: 508 GSRRRSPGRRMSMTKSPPL*GLSAGP 431
Score = 39.1 bits (79), Expect(3) = 5e-038
Identities = 16/18 (88%), Positives = 16/18 (88%)
Frame = +2 / -1
Query: 875 LPRGAAVTSSWLSSGAAR 928
LP GAA TSSWLSSGAAR
Sbjct: 290 LPXGAAATSSWLSSGAAR 237
Score = 33.1 bits (66), Expect(3) = 3e-028
Identities = 13/16 (81%), Positives = 15/16 (93%)
Frame = -1 / +1
Query: 930 NRAAPEESQEEVTAAP 883
+RAAP+ESQEEV AAP
Sbjct: 235 HRAAPDESQEEVAAAP 282
>gb|BG239925.1|BG239925 OV1_30_G09.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 574
Score = 82.6 bits (174), Expect(3) = 6e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 34 GEDMFHWQATIMGPXDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 195
Score = 36.8 bits (74), Expect(3) = 6e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 301 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 393
Score = 34.1 bits (68), Expect(3) = 6e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 190 NSNGSICLDILKEQW 234
>gb|CN152557.1|CN152557 WOUND1_82_G03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_G03_A002 5', mRNA sequence
Length = 776
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 166 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 327
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 433 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 525
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 322 NSNGSICLDILKEQW 366
>gb|CN127333.1|CN127333 RHOH1_22_H09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_22_H09_A002 3', mRNA sequence
Length = 769
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 212 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 373
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 479 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 571
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 368 NSNGSICLDILKEQW 412
>gb|CX606873.1|CX606873 ANR1_5_A05.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_A05_A002 5', mRNA sequence
Length = 738
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 157 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 318
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 424 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 516
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 313 NSNGSICLDILKEQW 357
>gb|CX611989.1|CX611989 ANR1_27_H04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H04_A002 5', mRNA sequence
Length = 736
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 156 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 317
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 423 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 515
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 312 NSNGSICLDILKEQW 356
>gb|CX611901.1|CX611901 ANR1_27_H04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_27_H04_A002 3', mRNA sequence
Length = 724
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 162 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 323
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 429 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 521
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 318 NSNGSICLDILKEQW 362
>gb|CN152474.1|CN152474 WOUND1_82_G03.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_82_G03_A002 3', mRNA sequence
Length = 708
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 125 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 286
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 392 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 484
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 281 NSNGSICLDILKEQW 325
>gb|CX606782.1|CX606782 ANR1_5_A05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_5_A05_A002 3', mRNA sequence
Length = 690
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 129 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 290
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 396 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 488
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 285 NSNGSICLDILKEQW 329
>gb|CD225320.1|CD225320 CCC1_39_G06.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_39_G06_A007 5', mRNA sequence
Length = 681
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 192 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 353
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 459 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 551
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 348 NSNGSICLDILKEQW 392
>gb|BE367626.1|BE367626 PI1_9_A07.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 663
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 59 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 220
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 326 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 418
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 215 NSNGSICLDILKEQW 259
>gb|CF486690.1|CF486690 POL1_39_D12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_39_D12_A002 3', mRNA sequence
Length = 656
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 100 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 261
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 367 DDPLVPEIAHMYRTDRPKYEATARSWTQKYA 459
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 256 NSNGSICLDILKEQW 300
>gb|CD431965.1|CD431965 ETH1_12_A01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_12_A01_A002 3', mRNA sequence
Length = 568
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 57 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 218
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 324 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 416
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 213 NSNGSICLDILKEQW 257
>gb|BE367620.1|BE367620 PI1_9_A07.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 556
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 152 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 313
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 419 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 511
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 308 NSNGSICLDILKEQW 352
>gb|AW745063.1|AW745063 LG1_386_C08.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 555
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 155 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 316
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 422 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 514
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 311 NSNGSICLDILKEQW 355
>gb|CD432007.1|CD432007 ETH1_12_A01.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_12_A01_A002 5', mRNA sequence
Length = 538
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 173 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 334
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 440 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 532
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 329 NSNGSICLDILKEQW 373
>gb|BE367055.1|BE367055 PI1_42_F01.g2_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 516
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 121 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 282
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 388 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 480
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 277 NSNGSICLDILKEQW 321
>gb|BG240501.1|BG240501 OV1_30_G09.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 499
Score = 82.2 bits (173), Expect(3) = 8e-025
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 80 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 241
Score = 36.8 bits (74), Expect(3) = 8e-025
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT+ +A
Sbjct: 347 DDPLVPEIAHMYKTDRPKYEATARSWTQKYA 439
Score = 34.1 bits (68), Expect(3) = 8e-025
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 236 NSNGSICLDILKEQW 280
>gb|CN141039.1|CN141039 OX1_49_A08.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_49_A08_A002 3', mRNA sequence
Length = 772
Score = 82.2 bits (173), Expect(3) = 2e-024
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 138 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 299
Score = 35.4 bits (71), Expect(3) = 2e-024
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + +TAR WT+ +A
Sbjct: 405 DDPLVPEIAHMYKTDRPKYESTARSWTQKYA 497
Score = 34.1 bits (68), Expect(3) = 2e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 294 NSNGSICLDILKEQW 338
>gb|CD431369.1|CD431369 ETH1_8_A10.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_8_A10_A002 5', mRNA sequence
Length = 727
Score = 82.2 bits (173), Expect(3) = 2e-024
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 332 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 493
Score = 35.4 bits (71), Expect(3) = 2e-024
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + +TAR WT+ +A
Sbjct: 599 DDPLVPEIAHMYKTDRPKYESTARSWTQKYA 691
Score = 34.1 bits (68), Expect(3) = 2e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 488 NSNGSICLDILKEQW 532
>gb|BE599149.1|BE599149 PI1_85_H12.b1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 607
Score = 82.2 bits (173), Expect(3) = 2e-024
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 138 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 299
Score = 35.4 bits (71), Expect(3) = 2e-024
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + +TAR WT+ +A
Sbjct: 405 DDPLVPEIAHMYKTDRPKYESTARSWTQKYA 497
Score = 34.1 bits (68), Expect(3) = 2e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 294 NSNGSICLDILKEQW 338
>gb|BE597762.1|BE597762 PI1_85_H12.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 566
Score = 82.2 bits (173), Expect(3) = 2e-024
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 1 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 162
Score = 35.4 bits (71), Expect(3) = 2e-024
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + +TAR WT+ +A
Sbjct: 268 DDPLVPEIAHMYKTDRPKYESTARSWTQKYA 360
Score = 34.1 bits (68), Expect(3) = 2e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 157 NSNGSICLDILKEQW 201
>gb|CD462825.1|CD462825 ETH1_40_E07.g2_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_40_E07_A002 5', mRNA sequence
Length = 773
Score = 80.8 bits (170), Expect(3) = 5e-024
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSPY GG F + I P YPF+PPK+ F T+++HPNI+S
Sbjct: 276 GEDLFHWQATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINS 437
Score = 35.0 bits (70), Expect(3) = 5e-024
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT +A
Sbjct: 543 DDPLVPEIAHVYKTDRPRYEATAREWTRKYA 635
Score = 34.5 bits (69), Expect(3) = 5e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDIL+DQW
Sbjct: 432 NSNGSICLDILRDQW 476
>gb|AW745233.1|AW745233 LG1_387_F10.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 598
Score = 80.8 bits (170), Expect(3) = 5e-024
Identities = 28/54 (51%), Positives = 38/54 (70%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSPY GG F + I P YPF+PPK+ F T+++HPNI+S
Sbjct: 230 GEDLFHWQATIMGPSDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINS 391
Score = 35.0 bits (70), Expect(3) = 5e-024
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + ATAR WT +A
Sbjct: 497 DDPLVPEIAHVYKTDRPRYEATAREWTRKYA 589
Score = 34.5 bits (69), Expect(3) = 5e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDIL+DQW
Sbjct: 386 NSNGSICLDILRDQW 430
>gb|BF585878.1|BF585878 FM1_25_F06.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 557
Score = 79.9 bits (168), Expect(3) = 9e-024
Identities = 29/49 (59%), Positives = 36/49 (73%)
Frame = -1 / +2
Query: 756 HLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 14 HWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPNINS 160
Score = 35.4 bits (71), Expect(3) = 9e-024
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D P + +TAR WT+ +A
Sbjct: 266 DDPLVPEIAHMYKTDRPKYESTARSWTQKYA 358
Score = 34.1 bits (68), Expect(3) = 9e-024
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 155 NSNGSICLDILKEQW 199
>gb|BE361005.1|BE361005 DG1_68_F12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 664
Score = 82.2 bits (173), Expect(3) = 2e-023
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 94 GEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 255
Score = 35.9 bits (72), Expect(3) = 2e-023
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILKDQW
Sbjct: 250 NSNGSICLDILKDQW 294
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + TAR WT+ +A
Sbjct: 361 DDPLVPEIAHMYKTDRHKYENTARTWTQRYA 453
>gb|BF587789.1|BF587789 FM1_40_E10.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 628
Score = 82.2 bits (173), Expect(3) = 2e-023
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 80 GEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 241
Score = 35.9 bits (72), Expect(3) = 2e-023
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILKDQW
Sbjct: 236 NSNGSICLDILKDQW 280
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + TAR WT+ +A
Sbjct: 347 DDPLVPEIAHMYKTDRHKYENTARTWTQRYA 439
>gb|BE126239.1|BE126239 DG1_68_F12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 520
Score = 82.2 bits (173), Expect(3) = 2e-023
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSPY GG F++ I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 130 GEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINS 291
Score = 35.9 bits (72), Expect(3) = 2e-023
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILKDQW
Sbjct: 286 NSNGSICLDILKDQW 330
Score = 29.9 bits (59), Expect(3) = 2e-023
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + TAR WT+ +A
Sbjct: 397 DDPLVPEIAHMYKTDRHKYENTARTWTQRYA 489
>gb|DN551766.1|DN551766 pSPR-RT-A-H1_G05_C246 pSPR Sorghum propinquum cDNA, mRNA sequence
Length = 828
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / -1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 618 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 457
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / -1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 462 NSNGSICLDILKEQW 418
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / -1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 351 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 259
>gb|CF428071.1|CF428071 PH1_12_D10.g1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_12_D10_A002 5', mRNA sequence
Length = 690
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / -2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 584 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 423
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / -2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 428 NSNGSICLDILKEQW 384
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / -2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 317 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 225
>gb|CX607625.1|CX607625 ANR1_29_G03.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_29_G03_A002 5', mRNA sequence
Length = 679
Score = 79.9 bits (168), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 39/54 (72%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP DSPY GG F+++I P YPF+PPK+ F TKV+HP+I+S
Sbjct: 156 GEDMFHWQATIMGPPDSPYAGGVFLVNIHFPPDYPFKPPKVSFKTKVFHPHINS 317
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 312 NSNGSICLDILKEQW 356
Score = 33.1 bits (66), Expect(3) = 4e-023
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -1 / +3
Query: 498 DPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DP +A Y D P + ATAR WT +A
Sbjct: 426 DPLVPEIAHMYKTDRPKYEATARSWTHKYA 515
>gb|BE593870.1|BE593870 WS1_103_D04.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 667
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 102 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 263
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 258 NSNGSICLDILKEQW 302
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 369 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 461
>gb|CD226755.1|CD226755 CCC1_47_E08.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_47_E08_A007 5', mRNA sequence
Length = 656
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 234 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 395
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 390 NSNGSICLDILKEQW 434
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 501 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 593
>gb|CD462073.1|CD462073 SA1_39_H12.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_39_H12_A002 3', mRNA sequence
Length = 656
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 70 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 231
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 226 NSNGSICLDILKEQW 270
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 337 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 429
>gb|CD224718.1|CD224718 CCC1_35_G07.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_35_G07_A007 5', mRNA sequence
Length = 653
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +3
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 231 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 392
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +3
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 387 NSNGSICLDILKEQW 431
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +3
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 498 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 590
>gb|CD224628.1|CD224628 CCC1_35_G07.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_35_G07_A007 3', mRNA sequence
Length = 650
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 68 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 229
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 224 NSNGSICLDILKEQW 268
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 335 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 427
>gb|BG933602.1|BG933602 OV1_32_C11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 639
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 65 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 226
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 221 NSNGSICLDILKEQW 265
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 332 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 424
>gb|BM328789.1|BM328789 PIC1_26_E11.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 637
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 55 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 216
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 211 NSNGSICLDILKEQW 255
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 322 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 414
>gb|CN145142.1|CN145142 WOUND1_27_C01.b2_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_27_C01_A002 3', mRNA sequence
Length = 636
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +1
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 70 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 231
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +1
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 226 NSNGSICLDILKEQW 270
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +1
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 337 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 429
>gb|AW924658.1|AW924658 WS1_71_H06.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 628
Score = 81.3 bits (171), Expect(3) = 4e-023
Identities = 29/54 (53%), Positives = 40/54 (74%)
Frame = -1 / +2
Query: 771 GANISHLTGTIAGPADSPYEGGTFVIDIRLPGGYPFEPPKMQFITKVWHPNISS 610
G ++ H TI GP+DSP+ GG F+++I P YPF+PPK+ F TKV+HPNI+S
Sbjct: 215 GEDMFHWQATIMGPSDSPFAGGVFLVNIHFPPDYPFKPPKVSFRTKVFHPNINS 376
Score = 34.1 bits (68), Expect(3) = 4e-023
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = -1 / +2
Query: 612 SQNGAICLDILKDQW 568
+ NG+ICLDILK+QW
Sbjct: 371 NSNGSICLDILKEQW 415
Score = 31.8 bits (63), Expect(3) = 4e-023
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -1 / +2
Query: 501 DDPQDAVVAQQYLRDYPTFAATARYWTEAFA 409
DDP +A Y D + +TAR WT+ +A
Sbjct: 482 DDPLVPEIAHMYKTDRAKYESTARSWTQKYA 574
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,055,046,703
Number of Sequences: 832831
Number of extensions: 15540381
Number of successful extensions: 135505
Number of sequences better than 1.0e-020: 105
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 30557040409
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)