TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2404863.2.1
(672 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CW379734.1|CW379734 fsbb001f059c14f0 Sorghum methylation... 203 9e-074
gb|BM328918.1|BM328918 PIC1_31_C01.g1_A002 Pathogen-infecte... 203 1e-071
gb|BM328738.1|BM328738 PIC1_26_A02.g1_A002 Pathogen-infecte... 103 4e-069
gb|BM328644.1|BM328644 PIC1_24_G06.g1_A002 Pathogen-infecte... 199 6e-069
gb|BI075102.1|BI075102 IP1_19_G10.g1_A002 Immature pannicle... 203 8e-069
gb|CW448133.1|CW448133 fsbb001f181j18f0 Sorghum methylation... 203 3e-068
gb|CN135824.1|CN135824 OX1_39_D11.b1_A002 Oxidatively-stres... 203 5e-064
gb|BG049329.1|BG049329 OV1_18_E11.g1_A002 Ovary 1 (OV1) Sor... 203 8e-061
gb|AW282841.2|AW282841 LG1_305_F08.g1_A002 Light Grown 1 (L... 76 3e-050
gb|CD210669.1|CD210669 HS1_49_C03.b1_A012 Heat-shocked seed... 188 1e-046
gb|CD219527.1|CD219527 CCC1_57_C08.b1_A007 Callus culture/c... 188 1e-046
gb|CD221819.1|CD221819 CCC1_71_E09.b1_A007 Callus culture/c... 188 1e-046
gb|CD424085.1|CD424085 SA1_3_E09.b1_A002 Salicylic acid-tre... 188 1e-046
gb|CX616870.1|CX616870 GABR1_30_H12.b1_A002 GA- or brassino... 188 1e-046
>gb|CW379734.1|CW379734 fsbb001f059c14f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059c14, DNA
sequence
Length = 722
Score = 203 bits (437), Expect(3) = 1e-071
Identities = 75/86 (87%), Positives = 78/86 (90%)
Frame = +3 / -1
Query: 3 TWMCRGGWREAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*R 182
TWMC GGWREAFPLHCHAWCA+QEACLHL+QHYRVALNCW MGTDREYD+PG GCS *
Sbjct: 494 TWMCCGGWREAFPLHCHAWCAHQEACLHLKQHYRVALNCWKMGTDREYDYPGGGCSCV** 315
Query: 183 GIQQWRCCSPTERDQVKHFEA*DRHV 260
GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 314 GIQQWRCCSPT*RDQVKHSEA*DRHV 237
Score = 199 bits (429), Expect(3) = 1e-065
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +1 / -2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVG+WARIENMTILGEDVH D
Sbjct: 496 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGKWARIENMTILGEDVHVCD 317
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 316 EVYSNGGVVLPHKEIKSSILKPEIVM* 236
Score = 188 bits (406), Expect(4) = 9e-074
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1 / +2
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVR 88
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T MNIL QD HILYPCP SNS*VPPDNAV
Sbjct: 230 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHMNILPQDSHILYPCPFSNS*VPPDNAV* 409
Query: 87 DAGMLLDTHTTHDSAAGKPHAILHDTSRS 1
DA MLLD HTTHDSAAGKPHAILH+TSRS
Sbjct: 410 DASMLLDAHTTHDSAAGKPHAILHNTSRS 496
Score = 173 bits (372), Expect(2) = 4e-048
Identities = 78/89 (87%), Positives = 80/89 (89%)
Frame = +2 / -3
Query: 2 DLDVSWRMA*GFPAALSCVVCVSRSMPASRTALSGGTQLLDNGHG*RI*PSWARMFMGVT 181
DLDV WRMA*GFPAALSCVVC SRSM AS+TALSGGTQLL+NGHG*RI* SW RMFM V
Sbjct: 495 DLDVLWRMA*GFPAALSCVVCASRSMLASQTALSGGTQLLENGHG*RI*LSWGRMFMCVM 316
Query: 182 RYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 315 RYTAMAVLFSHIKRSSQAF*SLRSSCELS 229
Score = 154 bits (330), Expect(3) = 2e-055
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = -2 / +3
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEM 84
+HMTISGF+MLDLIS CGR PR+VIFSIRAH PTVECHPIMLFEM
Sbjct: 234 AHMTISGFRMLDLISLCGRTTPPLLYTSSHT*TSSPRIVIFSIRAHFPTVECHPIMLFEM 413
Query: 83 QACFLIRTPRMTVQRESLTPSSTTHPG 3
QACFL+RTPRMTVQRESLTPSSTTHPG
Sbjct: 414 QACFLMRTPRMTVQRESLTPSSTTHPG 494
Score = 104 bits (221), Expect(4) = 2e-040
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3 / +1
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVPIVQQL 113
LT*RSQAS+CLT*SL VGEQHRHCCIP H HEHP PG SYSLSVPI QQL
Sbjct: 235 LT*RSQASECLT*SLYVGEQHRHCCIPHHTHEHPPPG*SYSLSVPIFQQL 384
Score = 76.2 bits (160), Expect(4) = 9e-074
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1 / +1
Query: 390 KRTCLKLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KRTC+KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 109 KRTCMKLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 240
Score = 68.0 bits (142), Expect(3) = 1e-071
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / -1
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSFRHVRL 391
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF HV L
Sbjct: 236 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSFIHVLL 108
Score = 62.9 bits (131), Expect(3) = 2e-055
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3 / +3
Query: 391 QANMSEAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
Q NM EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 108 QENMYEAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 233
Score = 51.9 bits (107), Expect(4) = 2e-040
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3 / +1
Query: 61 HHA*QCSGKASRHPPRHIQV 2
HHA*QCSGKASRHPP+HIQV
Sbjct: 436 HHA*QCSGKASRHPPQHIQV 495
Score = 51.5 bits (106), Expect(3) = 1e-065
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +3 / -2
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTASDMFA 389
LQF* QYILKFF RI PLL* I GIF L+QTAS MF+
Sbjct: 232 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTASYMFS 110
Score = 44.6 bits (91), Expect(4) = 2e-040
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / +2
Query: 425 NKEQGYIVNSLASEHV*SCLN*AKDTNRYHL*KGICNP 312
NK+ IV + EHV*SCL+* +DT +Y L KGI NP
Sbjct: 74 NKDTLSIV*QESREHV*SCLH*VEDTRQYRLQKGISNP 187
Score = 39.6 bits (80), Expect(3) = 1e-071
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / -1
Query: 385 SLAKLLTMYPCSLLKSFVL 441
+L KLLTMYPCSLLKS VL
Sbjct: 107 TLVKLLTMYPCSLLKSLVL 51
Score = 39.6 bits (80), Expect(2) = 4e-048
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +1 / -3
Query: 304 TK*GLQIPFYK*YLLVSLA*FKQLQTCSLAKLLTMYPCSL 423
TK G IPF K Y LVS * KQL TCSL T+ SL
Sbjct: 195 TKGGFDIPFCKRYCLVSST*CKQLHTCSLDSC*TIDNVSL 76
Score = 39.6 bits (80), Expect(4) = 9e-074
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2 / +1
Query: 440 STKLFNKEQGYIVNSL 393
STKLFNKEQGYIVNSL
Sbjct: 52 STKLFNKEQGYIVNSL 99
Score = 39.1 bits (79), Expect(3) = 1e-065
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / -3
Query: 387 AC*TVDNVSLFFVEKFCT 440
+C*T+DNVSLFFVEKF T
Sbjct: 105 SC*TIDNVSLFFVEKFST 52
Score = 38.6 bits (78), Expect(3) = 2e-055
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / +3
Query: 441 KYKTFQQRTRIHCQQFSK 388
KY TFQQRTRIHCQ F+K
Sbjct: 51 KY*TFQQRTRIHCQ*FNK 104
Score = 31.3 bits (62), Expect(4) = 9e-074
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -2 / +2
Query: 491 PPSVLYDNHL*NMIDT 444
PPS +Y NHL NM+DT
Sbjct: 2 PPSSVYHNHLWNMVDT 49
Score = 22.6 bits (43), Expect(4) = 2e-040
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3 / +3
Query: 490 LPQYYMTTTCEI*LTLQVQNFSTKNK 413
L Y+T TC I LTL+ F + +
Sbjct: 3 LQAQYITITCGIWLTLKY*TFQQRTR 80
>gb|BM328918.1|BM328918 PIC1_31_C01.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 584
Score = 203 bits (437), Expect(3) = 1e-071
Identities = 75/86 (87%), Positives = 78/86 (90%)
Frame = +3 / +3
Query: 3 TWMCRGGWREAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*R 182
TWMC GGWREAFPLHCHAWCA+QEACLHL+QHYRVALNCW MGTDREYD+PG GCS *
Sbjct: 135 TWMCCGGWREAFPLHCHAWCAHQEACLHLKQHYRVALNCWKMGTDREYDYPGGGCSCV** 314
Query: 183 GIQQWRCCSPTERDQVKHFEA*DRHV 260
GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 315 GIQQWRCCSPT*RDQVKHSEA*DRHV 392
Score = 199 bits (429), Expect(3) = 1e-065
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVG+WARIENMTILGEDVH D
Sbjct: 133 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGKWARIENMTILGEDVHVCD 312
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 313 EVYSNGGVVLPHKEIKSSILKPEIVM* 393
Score = 188 bits (406), Expect(3) = 6e-070
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1 / -3
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVR 88
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T MNIL QD HILYPCP SNS*VPPDNAV
Sbjct: 399 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHMNILPQDSHILYPCPFSNS*VPPDNAV* 220
Query: 87 DAGMLLDTHTTHDSAAGKPHAILHDTSRS 1
DA MLLD HTTHDSAAGKPHAILH+TSRS
Sbjct: 219 DASMLLDAHTTHDSAAGKPHAILHNTSRS 133
Score = 173 bits (372), Expect(2) = 4e-048
Identities = 78/89 (87%), Positives = 80/89 (89%)
Frame = +2 / +2
Query: 2 DLDVSWRMA*GFPAALSCVVCVSRSMPASRTALSGGTQLLDNGHG*RI*PSWARMFMGVT 181
DLDV WRMA*GFPAALSCVVC SRSM AS+TALSGGTQLL+NGHG*RI* SW RMFM V
Sbjct: 134 DLDVLWRMA*GFPAALSCVVCASRSMLASQTALSGGTQLLENGHG*RI*LSWGRMFMCVM 313
Query: 182 RYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 314 RYTAMAVLFSHIKRSSQAF*SLRSSCELS 400
Score = 154 bits (330), Expect(3) = 2e-055
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = -2 / -1
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEM 84
+HMTISGF+MLDLIS CGR PR+VIFSIRAH PTVECHPIMLFEM
Sbjct: 395 AHMTISGFRMLDLISLCGRTTPPLLYTSSHT*TSSPRIVIFSIRAHFPTVECHPIMLFEM 216
Query: 83 QACFLIRTPRMTVQRESLTPSSTTHPG 3
QACFL+RTPRMTVQRESLTPSSTTHPG
Sbjct: 215 QACFLMRTPRMTVQRESLTPSSTTHPG 135
Score = 104 bits (221), Expect(3) = 5e-039
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3 / -2
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVPIVQQL 113
LT*RSQAS+CLT*SL VGEQHRHCCIP H HEHP PG SYSLSVPI QQL
Sbjct: 394 LT*RSQASECLT*SLYVGEQHRHCCIPHHTHEHPPPG*SYSLSVPIFQQL 245
Score = 76.2 bits (160), Expect(3) = 6e-070
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1 / -2
Query: 390 KRTCLKLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KRTC+KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 520 KRTCMKLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 389
Score = 68.0 bits (142), Expect(3) = 1e-071
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / +3
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSFRHVRL 391
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF HV L
Sbjct: 393 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSFIHVLL 521
Score = 62.9 bits (131), Expect(3) = 2e-055
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3 / -1
Query: 391 QANMSEAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
Q NM EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 521 QENMYEAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 396
Score = 51.9 bits (107), Expect(3) = 5e-039
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3 / -2
Query: 61 HHA*QCSGKASRHPPRHIQV 2
HHA*QCSGKASRHPP+HIQV
Sbjct: 193 HHA*QCSGKASRHPPQHIQV 134
Score = 51.5 bits (106), Expect(3) = 1e-065
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +3 / +1
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTASDMFA 389
LQF* QYILKFF RI PLL* I GIF L+QTAS MF+
Sbjct: 397 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTASYMFS 519
Score = 44.6 bits (91), Expect(3) = 5e-039
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / -3
Query: 425 NKEQGYIVNSLASEHV*SCLN*AKDTNRYHL*KGICNP 312
NK+ IV + EHV*SCL+* +DT +Y L KGI NP
Sbjct: 555 NKDTLSIV*QESREHV*SCLH*VEDTRQYRLQKGISNP 442
Score = 39.6 bits (80), Expect(3) = 1e-071
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 385 SLAKLLTMYPCSLLKSFVL 441
+L KLLTMYPCSLLKS VL
Sbjct: 522 TLVKLLTMYPCSLLKSLVL 578
Score = 39.6 bits (80), Expect(2) = 4e-048
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +1 / +2
Query: 304 TK*GLQIPFYK*YLLVSLA*FKQLQTCSLAKLLTMYPCSL 423
TK G IPF K Y LVS * KQL TCSL T+ SL
Sbjct: 434 TKGGFDIPFCKRYCLVSST*CKQLHTCSLDSC*TIDNVSL 553
Score = 39.6 bits (80), Expect(3) = 6e-070
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2 / -2
Query: 440 STKLFNKEQGYIVNSL 393
STKLFNKEQGYIVNSL
Sbjct: 577 STKLFNKEQGYIVNSL 530
Score = 39.1 bits (79), Expect(3) = 1e-065
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 387 AC*TVDNVSLFFVEKFCT 440
+C*T+DNVSLFFVEKF T
Sbjct: 524 SC*TIDNVSLFFVEKFST 577
Score = 38.6 bits (78), Expect(3) = 2e-055
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 441 KYKTFQQRTRIHCQQFSK 388
KY TFQQRTRIHCQ F+K
Sbjct: 578 KY*TFQQRTRIHCQ*FNK 525
>gb|BM328738.1|BM328738 PIC1_26_A02.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 575
Score = 103 bits (219), Expect(6) = 4e-069
Identities = 41/47 (87%), Positives = 43/47 (91%)
Frame = -1 / -3
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCP 127
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T MNIL QD HILYPCP
Sbjct: 141 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHMNILPQDSHILYPCP 1
Score = 96.8 bits (205), Expect(6) = 9e-061
Identities = 42/45 (93%), Positives = 42/45 (93%)
Frame = +1 / +1
Query: 127 WARIENMTILGEDVHGGDEVYSNGGVVLPQKEIKSSILKPEIVM* 261
WARIENMTILGEDVH DEVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 1 WARIENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM* 135
Score = 96.4 bits (204), Expect(6) = 8e-058
Identities = 39/45 (86%), Positives = 40/45 (88%)
Frame = -3 / -2
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVP 128
LT*RSQAS+CLT*SL VGEQHRHCCIP H HEHP PG SYSLSVP
Sbjct: 136 LT*RSQASECLT*SLYVGEQHRHCCIPHHTHEHPPPG*SYSLSVP 2
Score = 91.8 bits (194), Expect(6) = 2e-052
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = +3 / +3
Query: 129 GTDREYDHPGRGCSWG*RGIQQWRCCSPTERDQVKHFEA*DRHV 260
GTDREYD+PG GCS * GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 3 GTDREYDYPGGGCSCV**GIQQWRCCSPT*RDQVKHSEA*DRHV 134
Score = 89.0 bits (188), Expect(4) = 2e-036
Identities = 41/47 (87%), Positives = 41/47 (87%)
Frame = +2 / +2
Query: 128 GHG*RI*PSWARMFMGVTRYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
GHG*RI* SW RMFM V RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 2 GHG*RI*LSWGRMFMCVMRYTAMAVLFSHIKRSSQAF*SLRSSCELS 142
Score = 76.2 bits (160), Expect(6) = 4e-069
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1 / -2
Query: 390 KRTCLKLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KRTC+KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 262 KRTCMKLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 131
Score = 68.0 bits (142), Expect(6) = 9e-061
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / +3
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSFRHVRL 391
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF HV L
Sbjct: 135 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSFIHVLL 263
Score = 62.9 bits (131), Expect(6) = 8e-058
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3 / -1
Query: 391 QANMSEAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
Q NM EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 263 QENMYEAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 138
Score = 55.6 bits (115), Expect(6) = 4e-069
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2 / -3
Query: 527 YGIELLQIKGPKPPSVLYDNHL*NMIDT 444
Y IELLQIKGPKPPS +Y NHL NM+DT
Sbjct: 405 YCIELLQIKGPKPPSSVYHNHLWNMVDT 322
Score = 53.8 bits (111), Expect(4) = 1e-031
Identities = 25/45 (55%), Positives = 28/45 (62%)
Frame = -2 / -1
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRA 129
+HMTISGF+MLDLIS CGR PR+VIFSIRA
Sbjct: 137 AHMTISGFRMLDLISLCGRTTPPLLYTSSHT*TSSPRIVIFSIRA 3
Score = 51.5 bits (106), Expect(6) = 2e-052
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +3 / +1
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTASDMFA 389
LQF* QYILKFF RI PLL* I GIF L+QTAS MF+
Sbjct: 139 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTASYMFS 261
Score = 51.5 bits (106), Expect(6) = 4e-069
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -1
Query: 619 VYISPGEHLAHKHYC*KLHWTTF 551
VYISP EHLAHKHY *KL WTTF
Sbjct: 491 VYISPEEHLAHKHYY*KLPWTTF 423
Score = 49.6 bits (102), Expect(6) = 9e-061
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 552 NVVQCNFQQ*CLCAKCSPGEMYTLPT 629
NVVQ NFQ *CLCAKCS GEMYT T
Sbjct: 424 NVVQGNFQ**CLCAKCSSGEMYTHKT 501
Score = 48.3 bits (99), Expect(6) = 8e-058
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2 / -3
Query: 617 VHFSGRAFSTQTLLLKVTLDNI 552
VHFSGRAF TQTLLLKVTLD+I
Sbjct: 489 VHFSGRAFGTQTLLLKVTLDHI 424
Score = 47.8 bits (98), Expect(6) = 9e-061
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 444 SVNHISQVVVI*Y*GRFWTLDLQKFNTI 527
SVNHI QV+VI RFWTLDLQKFN I
Sbjct: 322 SVNHIPQVIVIY*AWRFWTLDLQKFNAI 405
Score = 47.8 bits (98), Expect(4) = 1e-031
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -3 / -1
Query: 526 MVLNFCRSRVQNLPQYYMTTTCEI*LTLQVQNFSTKNK 413
+ LNFCRSRVQNL Y+T TC I LTL+ F + +
Sbjct: 404 IALNFCRSRVQNLQAQYITITCGIWLTLKY*TFQQRTR 291
Score = 47.3 bits (97), Expect(6) = 2e-052
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1 / +2
Query: 424 LKSFVLVVSIIFHKWLSYNTEGGFGPLICRSSI 522
++ F +VS IFHK L Y GGFGPLICRSS+
Sbjct: 302 VEKFSTLVSTIFHK*L*YTELGGFGPLICRSSM 400
Score = 46.9 bits (96), Expect(4) = 1e-031
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -1 / -2
Query: 618 CTFLRESI*HTNITAESYIGQHLKINLFLL 529
CTFLR+SI HTNIT ESY+G H L LL
Sbjct: 490 CTFLRKSIWHTNITTESYLGPHFFNLLLLL 401
Score = 46.4 bits (95), Expect(6) = 2e-052
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 553 MLSNVTFSSNVCVLNALPEKCT 618
M S VTFSSNVCV NALPEKCT
Sbjct: 425 MWSKVTFSSNVCVPNALPEKCT 490
Score = 44.6 bits (91), Expect(4) = 1e-031
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / -3
Query: 425 NKEQGYIVNSLASEHV*SCLN*AKDTNRYHL*KGICNP 312
NK+ IV + EHV*SCL+* +DT +Y L KGI NP
Sbjct: 297 NKDTLSIV*QESREHV*SCLH*VEDTRQYRLQKGISNP 184
Score = 43.2 bits (88), Expect(6) = 8e-058
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = -1 / -2
Query: 534 LLLWY*TSADQGSKTSLSII*QPLVKYD*HYKYKTFQQ 421
LLL +*TSADQGSKTS I Q LV+Y *H K F +
Sbjct: 412 LLLLH*TSADQGSKTSKLSISQSLVEYG*H*STKLFNK 299
Score = 41.8 bits (85), Expect(4) = 2e-036
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = +2 / +3
Query: 551 KCCPM*LSAVMFVC*MLSRRNVH 619
KC P *LS VMFVC ML RRNVH
Sbjct: 423 KCGPR*LSVVMFVCQMLFRRNVH 491
Score = 39.6 bits (80), Expect(6) = 9e-061
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 385 SLAKLLTMYPCSLLKSFVL 441
+L KLLTMYPCSLLKS VL
Sbjct: 264 TLVKLLTMYPCSLLKSLVL 320
Score = 39.6 bits (80), Expect(6) = 4e-069
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2 / -2
Query: 440 STKLFNKEQGYIVNSL 393
STKLFNKEQGYIVNSL
Sbjct: 319 STKLFNKEQGYIVNSL 272
Score = 39.6 bits (80), Expect(4) = 2e-036
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +1 / +2
Query: 304 TK*GLQIPFYK*YLLVSLA*FKQLQTCSLAKLLTMYPCSL 423
TK G IPF K Y LVS * KQL TCSL T+ SL
Sbjct: 176 TKGGFDIPFCKRYCLVSST*CKQLHTCSLDSC*TIDNVSL 295
Score = 39.1 bits (79), Expect(4) = 2e-036
Identities = 18/27 (66%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 449 QSYFTSGCHIILREVLDP*SAEVQYHS 529
Q Y TS C I+ EVLDP*SAEVQ +S
Sbjct: 327 QPYSTSDCDILSLEVLDP*SAEVQCNS 407
Score = 39.1 bits (79), Expect(6) = 2e-052
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 387 AC*TVDNVSLFFVEKFCT 440
+C*T+DNVSLFFVEKF T
Sbjct: 266 SC*TIDNVSLFFVEKFST 319
Score = 38.6 bits (78), Expect(6) = 8e-058
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -1
Query: 441 KYKTFQQRTRIHCQQFSK 388
KY TFQQRTRIHCQ F+K
Sbjct: 320 KY*TFQQRTRIHCQ*FNK 267
Score = 28.6 bits (56), Expect(6) = 4e-069
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -2
Query: 672 LVQD*IREHIKLHHTWA 622
LVQD*IR + LH+TW+
Sbjct: 547 LVQD*IRTILGLHYTWS 497
Score = 26.7 bits (52), Expect(6) = 8e-058
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -3
Query: 671 WYKIKYVNILSYITRG 624
WYKIKY YIT G
Sbjct: 546 WYKIKYEPY*GYITHG 499
Score = 24.4 bits (47), Expect(6) = 9e-061
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 626 HV*CNLICSRI*SCT 670
HV*CN RI*SCT
Sbjct: 501 HV*CNPNMVRI*SCT 545
Score = 21.7 bits (41), Expect(6) = 2e-052
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 630 CDVT*YVHVFNLVP 671
C+VT VFNLVP
Sbjct: 505 CNVTLIWFVFNLVP 546
>gb|BM328644.1|BM328644 PIC1_24_G06.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 585
Score = 199 bits (429), Expect(3) = 6e-069
Identities = 74/86 (86%), Positives = 77/86 (89%)
Frame = +3 / +1
Query: 3 TWMCRGGWREAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*R 182
TWMC GGWREAFPLHCHAWCA+QEACLHL+QHYRVALNCW MGTDREYD+PG GC *
Sbjct: 133 TWMCCGGWREAFPLHCHAWCAHQEACLHLKQHYRVALNCWKMGTDREYDYPGGGC*CV** 312
Query: 183 GIQQWRCCSPTERDQVKHFEA*DRHV 260
GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 313 GIQQWRCCSPT*RDQVKHSEA*DRHV 390
Score = 196 bits (422), Expect(3) = 2e-062
Identities = 82/87 (94%), Positives = 84/87 (96%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVG+WARIENMTILGEDV+ D
Sbjct: 131 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGKWARIENMTILGEDVNVCD 310
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 311 EVYSNGGVVLPHKEIKSSILKPEIVM* 391
Score = 187 bits (402), Expect(3) = 1e-067
Identities = 77/89 (86%), Positives = 81/89 (91%)
Frame = -1 / -3
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVR 88
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T +NIL QD HILYPCP SNS*VPPDNAV
Sbjct: 397 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHINILPQDSHILYPCPFSNS*VPPDNAV* 218
Query: 87 DAGMLLDTHTTHDSAAGKPHAILHDTSRS 1
DA MLLD HTTHDSAAGKPHAILH+TSRS
Sbjct: 217 DASMLLDAHTTHDSAAGKPHAILHNTSRS 131
Score = 170 bits (366), Expect(2) = 3e-047
Identities = 77/89 (86%), Positives = 79/89 (88%)
Frame = +2 / +3
Query: 2 DLDVSWRMA*GFPAALSCVVCVSRSMPASRTALSGGTQLLDNGHG*RI*PSWARMFMGVT 181
DLDV WRMA*GFPAALSCVVC SRSM AS+TALSGGTQLL+NGHG*RI* SW RM M V
Sbjct: 132 DLDVLWRMA*GFPAALSCVVCASRSMLASQTALSGGTQLLENGHG*RI*LSWGRMLMCVM 311
Query: 182 RYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 312 RYTAMAVLFSHIKRSSQAF*SLRSSCELS 398
Score = 155 bits (333), Expect(3) = 4e-054
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = -2 / -1
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEM 84
+HMTISGF+MLDLIS CGR PR+VIFSIRAH PTVECHPIMLFEM
Sbjct: 393 AHMTISGFRMLDLISLCGRTTPPLLYTSSHTLTSSPRIVIFSIRAHFPTVECHPIMLFEM 214
Query: 83 QACFLIRTPRMTVQRESLTPSSTTHPG 3
QACFL+RTPRMTVQRESLTPSSTTHPG
Sbjct: 213 QACFLMRTPRMTVQRESLTPSSTTHPG 133
Score = 100 bits (212), Expect(3) = 8e-038
Identities = 42/50 (84%), Positives = 43/50 (86%)
Frame = -3 / -2
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVPIVQQL 113
LT*RSQAS+CLT*SL VGEQHRHCCIP H H HP PG SYSLSVPI QQL
Sbjct: 392 LT*RSQASECLT*SLYVGEQHRHCCIPHHTH*HPPPG*SYSLSVPIFQQL 243
Score = 76.2 bits (160), Expect(3) = 1e-067
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1 / -2
Query: 390 KRTCLKLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KRTC+KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 518 KRTCMKLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 387
Score = 68.0 bits (142), Expect(3) = 6e-069
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / +1
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSFRHVRL 391
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF HV L
Sbjct: 391 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSFIHVLL 519
Score = 62.9 bits (131), Expect(3) = 4e-054
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3 / -1
Query: 391 QANMSEAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
Q NM EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 519 QENMYEAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 394
Score = 51.9 bits (107), Expect(3) = 8e-038
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3 / -2
Query: 61 HHA*QCSGKASRHPPRHIQV 2
HHA*QCSGKASRHPP+HIQV
Sbjct: 191 HHA*QCSGKASRHPPQHIQV 132
Score = 51.5 bits (106), Expect(3) = 2e-062
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +3 / +2
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTASDMFA 389
LQF* QYILKFF RI PLL* I GIF L+QTAS MF+
Sbjct: 395 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTASYMFS 517
Score = 44.6 bits (91), Expect(3) = 8e-038
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / -3
Query: 425 NKEQGYIVNSLASEHV*SCLN*AKDTNRYHL*KGICNP 312
NK+ IV + EHV*SCL+* +DT +Y L KGI NP
Sbjct: 553 NKDTLSIV*QESREHV*SCLH*VEDTRQYRLQKGISNP 440
Score = 39.6 bits (80), Expect(2) = 3e-047
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +1 / +3
Query: 304 TK*GLQIPFYK*YLLVSLA*FKQLQTCSLAKLLTMYPCSL 423
TK G IPF K Y LVS * KQL TCSL T+ SL
Sbjct: 432 TKGGFDIPFCKRYCLVSST*CKQLHTCSLDSC*TIDNVSL 551
Score = 34.1 bits (68), Expect(3) = 6e-069
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +1 / +1
Query: 385 SLAKLLTMYPCSLLKSFVL 441
+L KLLTMYPCSL S VL
Sbjct: 520 TLVKLLTMYPCSLWDSLVL 576
Score = 33.6 bits (67), Expect(3) = 1e-067
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = -2 / -2
Query: 440 STKLFNKEQGYIVNSL 393
STKL +KEQGYIVNSL
Sbjct: 575 STKLSHKEQGYIVNSL 528
Score = 33.1 bits (66), Expect(3) = 4e-054
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -1 / -1
Query: 441 KYKTFQQRTRIHCQQFSK 388
KY T QRTRIHCQ F+K
Sbjct: 576 KY*TIPQRTRIHCQ*FNK 523
Score = 31.8 bits (63), Expect(3) = 2e-062
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = +3 / +3
Query: 387 AC*TVDNVSLFFVEKFCT 440
+C*T+DNVSLFFV F T
Sbjct: 522 SC*TIDNVSLFFVG*FST 575
>gb|BI075102.1|BI075102 IP1_19_G10.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 654
Score = 203 bits (437), Expect(3) = 8e-069
Identities = 75/86 (87%), Positives = 78/86 (90%)
Frame = +3 / +2
Query: 3 TWMCRGGWREAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*R 182
TWMC GGWREAFPLHCHAWCA+QEACLHL+QHYRVALNCW MGTDREYD+PG GCS *
Sbjct: 227 TWMCCGGWREAFPLHCHAWCAHQEACLHLKQHYRVALNCWKMGTDREYDYPGGGCSCV** 406
Query: 183 GIQQWRCCSPTERDQVKHFEA*DRHV 260
GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 407 GIQQWRCCSPT*RDQVKHSEA*DRHV 484
Score = 199 bits (429), Expect(3) = 8e-063
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVG+WARIENMTILGEDVH D
Sbjct: 225 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGKWARIENMTILGEDVHVCD 404
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 405 EVYSNGGVVLPHKEIKSSILKPEIVM* 485
Score = 188 bits (406), Expect(3) = 2e-066
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1 / -2
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVR 88
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T MNIL QD HILYPCP SNS*VPPDNAV
Sbjct: 491 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHMNILPQDSHILYPCPFSNS*VPPDNAV* 312
Query: 87 DAGMLLDTHTTHDSAAGKPHAILHDTSRS 1
DA MLLD HTTHDSAAGKPHAILH+TSRS
Sbjct: 311 DASMLLDAHTTHDSAAGKPHAILHNTSRS 225
Score = 173 bits (372), Expect(2) = 4e-048
Identities = 78/89 (87%), Positives = 80/89 (89%)
Frame = +2 / +1
Query: 2 DLDVSWRMA*GFPAALSCVVCVSRSMPASRTALSGGTQLLDNGHG*RI*PSWARMFMGVT 181
DLDV WRMA*GFPAALSCVVC SRSM AS+TALSGGTQLL+NGHG*RI* SW RMFM V
Sbjct: 226 DLDVLWRMA*GFPAALSCVVCASRSMLASQTALSGGTQLLENGHG*RI*LSWGRMFMCVM 405
Query: 182 RYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 406 RYTAMAVLFSHIKRSSQAF*SLRSSCELS 492
Score = 154 bits (330), Expect(3) = 1e-051
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = -2 / -3
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEM 84
+HMTISGF+MLDLIS CGR PR+VIFSIRAH PTVECHPIMLFEM
Sbjct: 487 AHMTISGFRMLDLISLCGRTTPPLLYTSSHT*TSSPRIVIFSIRAHFPTVECHPIMLFEM 308
Query: 83 QACFLIRTPRMTVQRESLTPSSTTHPG 3
QACFL+RTPRMTVQRESLTPSSTTHPG
Sbjct: 307 QACFLMRTPRMTVQRESLTPSSTTHPG 227
Score = 104 bits (221), Expect(3) = 5e-039
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3 / -1
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVPIVQQL 113
LT*RSQAS+CLT*SL VGEQHRHCCIP H HEHP PG SYSLSVPI QQL
Sbjct: 486 LT*RSQASECLT*SLYVGEQHRHCCIPHHTHEHPPPG*SYSLSVPIFQQL 337
Score = 76.2 bits (160), Expect(3) = 2e-066
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1 / -1
Query: 390 KRTCLKLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KRTC+KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 612 KRTCMKLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 481
Score = 68.0 bits (142), Expect(3) = 8e-069
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / +2
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSFRHVRL 391
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF HV L
Sbjct: 485 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSFIHVLL 613
Score = 62.9 bits (131), Expect(3) = 1e-051
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3 / -3
Query: 391 QANMSEAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
Q NM EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 613 QENMYEAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 488
Score = 51.9 bits (107), Expect(3) = 5e-039
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3 / -1
Query: 61 HHA*QCSGKASRHPPRHIQV 2
HHA*QCSGKASRHPP+HIQV
Sbjct: 285 HHA*QCSGKASRHPPQHIQV 226
Score = 51.5 bits (106), Expect(3) = 8e-063
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +3 / +3
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTASDMFA 389
LQF* QYILKFF RI PLL* I GIF L+QTAS MF+
Sbjct: 489 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTASYMFS 611
Score = 44.6 bits (91), Expect(3) = 5e-039
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / -2
Query: 425 NKEQGYIVNSLASEHV*SCLN*AKDTNRYHL*KGICNP 312
NK+ IV + EHV*SCL+* +DT +Y L KGI NP
Sbjct: 647 NKDTLSIV*QESREHV*SCLH*VEDTRQYRLQKGISNP 534
Score = 39.6 bits (80), Expect(2) = 4e-048
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +1 / +1
Query: 304 TK*GLQIPFYK*YLLVSLA*FKQLQTCSLAKLLTMYPCSL 423
TK G IPF K Y LVS * KQL TCSL T+ SL
Sbjct: 526 TKGGFDIPFCKRYCLVSST*CKQLHTCSLDSC*TIDNVSL 645
Score = 29.9 bits (59), Expect(3) = 8e-063
Identities = 11/13 (84%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 387 AC*TVDNVSLFFV 425
+C*T+DNVSLFFV
Sbjct: 616 SC*TIDNVSLFFV 654
Score = 29.9 bits (59), Expect(3) = 8e-069
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +1 / +2
Query: 385 SLAKLLTMYPCSL 423
+L KLLTMYPCSL
Sbjct: 614 TLVKLLTMYPCSL 652
Score = 27.6 bits (54), Expect(3) = 2e-066
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = -1 / -3
Query: 423 QRTRIHCQQFSK 388
QRTRIHCQ F+K
Sbjct: 652 QRTRIHCQ*FNK 617
Score = 26.3 bits (51), Expect(3) = 1e-051
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -2 / -1
Query: 425 NKEQGYIVNSL 393
+KEQGYIVNSL
Sbjct: 654 HKEQGYIVNSL 622
>gb|CW448133.1|CW448133 fsbb001f181j18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f181j18, DNA
sequence
Length = 524
Score = 203 bits (437), Expect(3) = 3e-068
Identities = 75/86 (87%), Positives = 78/86 (90%)
Frame = +3 / -3
Query: 3 TWMCRGGWREAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*R 182
TWMC GGWREAFPLHCHAWCA+QEACLHL+QHYRVALNCW MGTDREYD+PG GCS *
Sbjct: 423 TWMCCGGWREAFPLHCHAWCAHQEACLHLKQHYRVALNCWKMGTDREYDYPGGGCSCV** 244
Query: 183 GIQQWRCCSPTERDQVKHFEA*DRHV 260
GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 243 GIQQWRCCSPT*RDQVKHSEA*DRHV 166
Score = 199 bits (429), Expect(3) = 2e-061
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +1 / -1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVG+WARIENMTILGEDVH D
Sbjct: 425 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGKWARIENMTILGEDVHVCD 246
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 245 EVYSNGGVVLPHKEIKSSILKPEIVM* 165
Score = 188 bits (406), Expect(3) = 1e-065
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1 / +3
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVR 88
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T MNIL QD HILYPCP SNS*VPPDNAV
Sbjct: 159 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHMNILPQDSHILYPCPFSNS*VPPDNAV* 338
Query: 87 DAGMLLDTHTTHDSAAGKPHAILHDTSRS 1
DA MLLD HTTHDSAAGKPHAILH+TSRS
Sbjct: 339 DASMLLDAHTTHDSAAGKPHAILHNTSRS 425
Score = 173 bits (372), Expect(2) = 4e-048
Identities = 78/89 (87%), Positives = 80/89 (89%)
Frame = +2 / -2
Query: 2 DLDVSWRMA*GFPAALSCVVCVSRSMPASRTALSGGTQLLDNGHG*RI*PSWARMFMGVT 181
DLDV WRMA*GFPAALSCVVC SRSM AS+TALSGGTQLL+NGHG*RI* SW RMFM V
Sbjct: 424 DLDVLWRMA*GFPAALSCVVCASRSMLASQTALSGGTQLLENGHG*RI*LSWGRMFMCVM 245
Query: 182 RYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 244 RYTAMAVLFSHIKRSSQAF*SLRSSCELS 158
Score = 154 bits (330), Expect(3) = 7e-051
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = -2 / +1
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEM 84
+HMTISGF+MLDLIS CGR PR+VIFSIRAH PTVECHPIMLFEM
Sbjct: 163 AHMTISGFRMLDLISLCGRTTPPLLYTSSHT*TSSPRIVIFSIRAHFPTVECHPIMLFEM 342
Query: 83 QACFLIRTPRMTVQRESLTPSSTTHPG 3
QACFL+RTPRMTVQRESLTPSSTTHPG
Sbjct: 343 QACFLMRTPRMTVQRESLTPSSTTHPG 423
Score = 104 bits (221), Expect(3) = 5e-039
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3 / +2
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVPIVQQL 113
LT*RSQAS+CLT*SL VGEQHRHCCIP H HEHP PG SYSLSVPI QQL
Sbjct: 164 LT*RSQASECLT*SLYVGEQHRHCCIPHHTHEHPPPG*SYSLSVPIFQQL 313
Score = 76.2 bits (160), Expect(3) = 1e-065
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1 / +2
Query: 390 KRTCLKLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KRTC+KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 38 KRTCMKLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 169
Score = 68.0 bits (142), Expect(3) = 3e-068
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / -3
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSFRHVRL 391
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF HV L
Sbjct: 165 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSFIHVLL 37
Score = 62.9 bits (131), Expect(3) = 7e-051
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3 / +1
Query: 391 QANMSEAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
Q NM EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 37 QENMYEAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 162
Score = 51.9 bits (107), Expect(3) = 5e-039
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3 / +2
Query: 61 HHA*QCSGKASRHPPRHIQV 2
HHA*QCSGKASRHPP+HIQV
Sbjct: 365 HHA*QCSGKASRHPPQHIQV 424
Score = 51.5 bits (106), Expect(3) = 2e-061
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +3 / -1
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTASDMFA 389
LQF* QYILKFF RI PLL* I GIF L+QTAS MF+
Sbjct: 161 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTASYMFS 39
Score = 44.6 bits (91), Expect(3) = 5e-039
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / +3
Query: 425 NKEQGYIVNSLASEHV*SCLN*AKDTNRYHL*KGICNP 312
NK+ IV + EHV*SCL+* +DT +Y L KGI NP
Sbjct: 3 NKDTLSIV*QESREHV*SCLH*VEDTRQYRLQKGISNP 116
Score = 39.6 bits (80), Expect(2) = 4e-048
Identities = 22/40 (55%), Positives = 23/40 (57%)
Frame = +1 / -2
Query: 304 TK*GLQIPFYK*YLLVSLA*FKQLQTCSLAKLLTMYPCSL 423
TK G IPF K Y LVS * KQL TCSL T+ SL
Sbjct: 124 TKGGFDIPFCKRYCLVSST*CKQLHTCSLDSC*TIDNVSL 5
Score = 28.1 bits (55), Expect(3) = 3e-068
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +1 / -3
Query: 385 SLAKLLTMYPCS 420
+L KLLTMYPCS
Sbjct: 36 TLVKLLTMYPCS 1
Score = 25.4 bits (49), Expect(3) = 2e-061
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / -2
Query: 387 AC*TVDNVSLF 419
+C*T+DNVSLF
Sbjct: 34 SC*TIDNVSLF 2
Score = 25.4 bits (49), Expect(3) = 1e-065
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1 / +1
Query: 420 RTRIHCQQFSK 388
RTRIHCQ F+K
Sbjct: 1 RTRIHCQ*FNK 33
Score = 23.5 bits (45), Expect(3) = 7e-051
Identities = 9/9 (100%), Positives = 9/9 (100%)
Frame = -2 / +2
Query: 419 EQGYIVNSL 393
EQGYIVNSL
Sbjct: 2 EQGYIVNSL 28
>gb|CN135824.1|CN135824 OX1_39_D11.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_39_D11_A002 3', mRNA sequence
Length = 763
Score = 203 bits (437), Expect(2) = 5e-064
Identities = 75/86 (87%), Positives = 78/86 (90%)
Frame = +3 / +2
Query: 3 TWMCRGGWREAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*R 182
TWMC GGWREAFPLHCHAWCA+QEACLHL+QHYRVALNCW MGTDREYD+PG GCS *
Sbjct: 392 TWMCCGGWREAFPLHCHAWCAHQEACLHLKQHYRVALNCWKMGTDREYDYPGGGCSCV** 571
Query: 183 GIQQWRCCSPTERDQVKHFEA*DRHV 260
GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 572 GIQQWRCCSPT*RDQVKHSEA*DRHV 649
Score = 199 bits (429), Expect(2) = 1e-057
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVG+WARIENMTILGEDVH D
Sbjct: 390 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGKWARIENMTILGEDVHVCD 569
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 570 EVYSNGGVVLPHKEIKSSILKPEIVM* 650
Score = 188 bits (406), Expect(2) = 4e-060
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1 / -3
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVR 88
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T MNIL QD HILYPCP SNS*VPPDNAV
Sbjct: 656 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHMNILPQDSHILYPCPFSNS*VPPDNAV* 477
Query: 87 DAGMLLDTHTTHDSAAGKPHAILHDTSRS 1
DA MLLD HTTHDSAAGKPHAILH+TSRS
Sbjct: 476 DASMLLDAHTTHDSAAGKPHAILHNTSRS 390
Score = 173 bits (372), Expect(2) = 6e-045
Identities = 78/89 (87%), Positives = 80/89 (89%)
Frame = +2 / +1
Query: 2 DLDVSWRMA*GFPAALSCVVCVSRSMPASRTALSGGTQLLDNGHG*RI*PSWARMFMGVT 181
DLDV WRMA*GFPAALSCVVC SRSM AS+TALSGGTQLL+NGHG*RI* SW RMFM V
Sbjct: 391 DLDVLWRMA*GFPAALSCVVCASRSMLASQTALSGGTQLLENGHG*RI*LSWGRMFMCVM 570
Query: 182 RYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 571 RYTAMAVLFSHIKRSSQAF*SLRSSCELS 657
Score = 154 bits (330), Expect(2) = 1e-047
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = -2 / -1
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEM 84
+HMTISGF+MLDLIS CGR PR+VIFSIRAH PTVECHPIMLFEM
Sbjct: 652 AHMTISGFRMLDLISLCGRTTPPLLYTSSHT*TSSPRIVIFSIRAHFPTVECHPIMLFEM 473
Query: 83 QACFLIRTPRMTVQRESLTPSSTTHPG 3
QACFL+RTPRMTVQRESLTPSSTTHPG
Sbjct: 472 QACFLMRTPRMTVQRESLTPSSTTHPG 392
Score = 104 bits (221), Expect(3) = 1e-035
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3 / -2
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVPIVQQL 113
LT*RSQAS+CLT*SL VGEQHRHCCIP H HEHP PG SYSLSVPI QQL
Sbjct: 651 LT*RSQASECLT*SLYVGEQHRHCCIPHHTHEHPPPG*SYSLSVPIFQQL 502
Score = 64.3 bits (134), Expect(2) = 4e-060
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = -1 / -2
Query: 375 KLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 762 KLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 646
Score = 62.9 bits (131), Expect(2) = 5e-064
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +2 / +2
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSF 376
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF
Sbjct: 650 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSF 763
Score = 57.0 bits (118), Expect(2) = 1e-047
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = -3 / -1
Query: 376 EAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 763 EAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 653
Score = 51.9 bits (107), Expect(3) = 1e-035
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3 / -2
Query: 61 HHA*QCSGKASRHPPRHIQV 2
HHA*QCSGKASRHPP+HIQV
Sbjct: 450 HHA*QCSGKASRHPPQHIQV 391
Score = 45.5 bits (93), Expect(2) = 1e-057
Identities = 25/36 (69%), Positives = 26/36 (72%)
Frame = +3 / +3
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTA 374
LQF* QYILKFF RI PLL* I GIF L+QTA
Sbjct: 654 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTA 761
Score = 33.1 bits (66), Expect(3) = 1e-035
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = -2 / -3
Query: 374 SCLN*AKDTNRYHL*KGICNP 312
SCL+* +DT +Y L KGI NP
Sbjct: 761 SCLH*VEDTRQYRLQKGISNP 699
Score = 29.0 bits (57), Expect(2) = 6e-045
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1 / +1
Query: 304 TK*GLQIPFYK*YLLVSLA*FKQL 375
TK G IPF K Y LVS * KQL
Sbjct: 691 TKGGFDIPFCKRYCLVSST*CKQL 762
>gb|BG049329.1|BG049329 OV1_18_E11.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 694
Score = 203 bits (437), Expect(2) = 8e-061
Identities = 75/86 (87%), Positives = 78/86 (90%)
Frame = +3 / +3
Query: 3 TWMCRGGWREAFPLHCHAWCAYQEACLHLEQHYRVALNCWTMGTDREYDHPGRGCSWG*R 182
TWMC GGWREAFPLHCHAWCA+QEACLHL+QHYRVALNCW MGTDREYD+PG GCS *
Sbjct: 309 TWMCCGGWREAFPLHCHAWCAHQEACLHLKQHYRVALNCWKMGTDREYDYPGGGCSCV** 488
Query: 183 GIQQWRCCSPTERDQVKHFEA*DRHV 260
GIQQWRCCSPT RDQVKH EA*DRHV
Sbjct: 489 GIQQWRCCSPT*RDQVKHSEA*DRHV 566
Score = 199 bits (429), Expect(2) = 3e-055
Identities = 83/87 (95%), Positives = 84/87 (96%)
Frame = +1 / +1
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVG+WARIENMTILGEDVH D
Sbjct: 307 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGKWARIENMTILGEDVHVCD 486
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
EVYSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 487 EVYSNGGVVLPHKEIKSSILKPEIVM* 567
Score = 188 bits (406), Expect(3) = 2e-059
Identities = 78/89 (87%), Positives = 81/89 (91%)
Frame = -1 / -2
Query: 267 ELSHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVR 88
E SHDDLRLQNA*LDLF+WENNTAIAVYL+T MNIL QD HILYPCP SNS*VPPDNAV
Sbjct: 573 ESSHDDLRLQNA*LDLFMWENNTAIAVYLITHMNILPQDSHILYPCPFSNS*VPPDNAV* 394
Query: 87 DAGMLLDTHTTHDSAAGKPHAILHDTSRS 1
DA MLLD HTTHDSAAGKPHAILH+TSRS
Sbjct: 393 DASMLLDAHTTHDSAAGKPHAILHNTSRS 307
Score = 173 bits (372), Expect(2) = 2e-043
Identities = 78/89 (87%), Positives = 80/89 (89%)
Frame = +2 / +2
Query: 2 DLDVSWRMA*GFPAALSCVVCVSRSMPASRTALSGGTQLLDNGHG*RI*PSWARMFMGVT 181
DLDV WRMA*GFPAALSCVVC SRSM AS+TALSGGTQLL+NGHG*RI* SW RMFM V
Sbjct: 308 DLDVLWRMA*GFPAALSCVVCASRSMLASQTALSGGTQLLENGHG*RI*LSWGRMFMCVM 487
Query: 182 RYTAMAVLFSHRKRSSQAF*SLRSSCESS 268
RYTAMAVLFSH KRSSQAF*SLRSSCE S
Sbjct: 488 RYTAMAVLFSHIKRSSQAF*SLRSSCELS 574
Score = 154 bits (330), Expect(2) = 3e-045
Identities = 65/87 (74%), Positives = 69/87 (79%)
Frame = -2 / -3
Query: 263 SHMTISGFKMLDLISFCGRXXXXXXXXXXXXXXXXPRMVIFSIRAHCPTVECHPIMLFEM 84
+HMTISGF+MLDLIS CGR PR+VIFSIRAH PTVECHPIMLFEM
Sbjct: 569 AHMTISGFRMLDLISLCGRTTPPLLYTSSHT*TSSPRIVIFSIRAHFPTVECHPIMLFEM 390
Query: 83 QACFLIRTPRMTVQRESLTPSSTTHPG 3
QACFL+RTPRMTVQRESLTPSSTTHPG
Sbjct: 389 QACFLMRTPRMTVQRESLTPSSTTHPG 309
Score = 104 bits (221), Expect(2) = 4e-031
Identities = 43/50 (86%), Positives = 44/50 (88%)
Frame = -3 / -1
Query: 262 LT*RSQASKCLT*SLSVGEQHRHCCIPRHPHEHPRPGWSYSLSVPIVQQL 113
LT*RSQAS+CLT*SL VGEQHRHCCIP H HEHP PG SYSLSVPI QQL
Sbjct: 568 LT*RSQASECLT*SLYVGEQHRHCCIPHHTHEHPPPG*SYSLSVPIFQQL 419
Score = 56.1 bits (116), Expect(3) = 2e-059
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = -1 / -1
Query: 360 GQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
G+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 664 GRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 563
Score = 52.4 bits (108), Expect(2) = 8e-061
Identities = 23/33 (69%), Positives = 25/33 (75%)
Frame = +2 / +3
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWP 361
SSPVL TVHS*VL ED SPF++DI WYL P
Sbjct: 567 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRP 665
Score = 51.9 bits (107), Expect(2) = 4e-031
Identities = 19/20 (95%), Positives = 20/20 (100%)
Frame = -3 / -1
Query: 61 HHA*QCSGKASRHPPRHIQV 2
HHA*QCSGKASRHPP+HIQV
Sbjct: 367 HHA*QCSGKASRHPPQHIQV 308
Score = 49.2 bits (101), Expect(2) = 3e-045
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = -3 / -3
Query: 355 KIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 659 KIPGNIVYKRGYQILPLSKNLRMYCG*NWR 570
Score = 37.3 bits (75), Expect(2) = 3e-055
Identities = 21/30 (70%), Positives = 21/30 (70%)
Frame = +3 / +1
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIF 356
LQF* QYILKFF RI PLL* I GIF
Sbjct: 571 LQF*PQYILKFFDKGRI*YPLL*TILPGIF 660
Score = 24.4 bits (47), Expect(3) = 2e-059
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -1 / -3
Query: 387 RTCLKLFELGQR 352
RTC+KLF LG +
Sbjct: 692 RTCMKLFALGSK 657
Score = 24.0 bits (46), Expect(2) = 2e-043
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1 / +2
Query: 304 TK*GLQIPFYK*YLLVS 354
TK G IPF K Y LVS
Sbjct: 608 TKGGFDIPFCKRYCLVS 658
>gb|AW282841.2|AW282841 LG1_305_F08.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 498
Score = 76.2 bits (160), Expect(6) = 3e-050
Identities = 32/44 (72%), Positives = 37/44 (84%)
Frame = -1 / -3
Query: 390 KRTCLKLFELGQRYQ*ISLIKGDLQSSLSGRT*ECTVVKTGELS 259
KRTC+KLF LG+RYQ IS KGD++SSL RT*ECTV KTGEL+
Sbjct: 172 KRTCMKLFALGRRYQAISFTKGDIKSSLCQRT*ECTVAKTGELT 41
Score = 68.0 bits (142), Expect(6) = 3e-043
Identities = 30/43 (69%), Positives = 33/43 (76%)
Frame = +2 / +3
Query: 263 SSPVLTTVHS*VLPLSEDCRSPFISDIYWYLWPNSNSFRHVRL 391
SSPVL TVHS*VL ED SPF++DI WYL PN+NSF HV L
Sbjct: 45 SSPVLATVHS*VL*QREDLISPFVNDIAWYLRPNANSFIHVLL 173
Score = 62.9 bits (131), Expect(6) = 4e-040
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = -3 / -2
Query: 391 QANMSEAV*IRPKIPIDITYKRGSAILT*WKNLRMYCS*NWR 266
Q NM EAV IR KIP +I YKRG IL KNLRMYC *NWR
Sbjct: 173 QENMYEAVCIRSKIPGNIVYKRGYQILPLSKNLRMYCG*NWR 48
Score = 55.6 bits (115), Expect(6) = 3e-050
Identities = 22/28 (78%), Positives = 24/28 (85%)
Frame = -2 / -1
Query: 527 YGIELLQIKGPKPPSVLYDNHL*NMIDT 444
Y IELLQIKGPKPPS +Y NHL NM+DT
Sbjct: 315 YCIELLQIKGPKPPSSVYHNHLWNMVDT 232
Score = 51.5 bits (106), Expect(6) = 3e-050
Identities = 20/23 (86%), Positives = 20/23 (86%)
Frame = -3 / -2
Query: 619 VYISPGEHLAHKHYC*KLHWTTF 551
VYISP EHLAHKHY *KL WTTF
Sbjct: 401 VYISPEEHLAHKHYY*KLPWTTF 333
Score = 51.5 bits (106), Expect(6) = 7e-036
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = +3 / +1
Query: 267 LQF*LQYILKFFH*VRIADPLL*VISIGIFGLIQTASDMFA 389
LQF* QYILKFF RI PLL* I GIF L+QTAS MF+
Sbjct: 49 LQF*PQYILKFFDKGRI*YPLL*TILPGIFDLMQTASYMFS 171
Score = 49.6 bits (102), Expect(6) = 3e-043
Identities = 21/26 (80%), Positives = 21/26 (80%)
Frame = +3 / +1
Query: 552 NVVQCNFQQ*CLCAKCSPGEMYTLPT 629
NVVQ NFQ *CLCAKCS GEMYT T
Sbjct: 334 NVVQGNFQ**CLCAKCSSGEMYTHKT 411
Score = 48.3 bits (99), Expect(6) = 4e-040
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = -2 / -1
Query: 617 VHFSGRAFSTQTLLLKVTLDNI 552
VHFSGRAF TQTLLLKVTLD+I
Sbjct: 399 VHFSGRAFGTQTLLLKVTLDHI 334
Score = 48.3 bits (99), Expect(4) = 3e-025
Identities = 20/30 (66%), Positives = 22/30 (73%)
Frame = -1 / -3
Query: 618 CTFLRESI*HTNITAESYIGQHLKINLFLL 529
CTFLR+SI HTNIT ESY+G H L LL
Sbjct: 400 CTFLRKSIWHTNITTESYLGPHFFFLLLLL 311
Score = 47.8 bits (98), Expect(6) = 3e-043
Identities = 21/28 (75%), Positives = 22/28 (78%)
Frame = +3 / +1
Query: 444 SVNHISQVVVI*Y*GRFWTLDLQKFNTI 527
SVNHI QV+VI RFWTLDLQKFN I
Sbjct: 232 SVNHIPQVIVIY*AWRFWTLDLQKFNAI 315
Score = 47.8 bits (98), Expect(4) = 3e-025
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -3 / -2
Query: 526 MVLNFCRSRVQNLPQYYMTTTCEI*LTLQVQNFSTKNK 413
+ LNFCRSRVQNL Y+T TC I LTL+ F + +
Sbjct: 314 IALNFCRSRVQNLQAQYITITCGIWLTLKY*TFQQRTR 201
Score = 47.3 bits (97), Expect(6) = 7e-036
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1 / +2
Query: 424 LKSFVLVVSIIFHKWLSYNTEGGFGPLICRSSI 522
++ F +VS IFHK L Y GGFGPLICRSS+
Sbjct: 212 VEKFSTLVSTIFHK*L*YTELGGFGPLICRSSM 310
Score = 46.4 bits (95), Expect(6) = 7e-036
Identities = 19/22 (86%), Positives = 19/22 (86%)
Frame = +1 / +2
Query: 553 MLSNVTFSSNVCVLNALPEKCT 618
M S VTFSSNVCV NALPEKCT
Sbjct: 335 MWSKVTFSSNVCVPNALPEKCT 400
Score = 44.6 bits (91), Expect(4) = 3e-025
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = -2 / -1
Query: 425 NKEQGYIVNSLASEHV*SCLN*AKDTNRYHL*KGICNP 312
NK+ IV + EHV*SCL+* +DT +Y L KGI NP
Sbjct: 207 NKDTLSIV*QESREHV*SCLH*VEDTRQYRLQKGISNP 94
Score = 43.2 bits (88), Expect(6) = 4e-040
Identities = 23/38 (60%), Positives = 26/38 (68%)
Frame = -1 / -3
Query: 534 LLLWY*TSADQGSKTSLSII*QPLVKYD*HYKYKTFQQ 421
LLL +*TSADQGSKTS I Q LV+Y *H K F +
Sbjct: 322 LLLLH*TSADQGSKTSKLSISQSLVEYG*H*STKLFNK 209
Score = 39.6 bits (80), Expect(6) = 3e-050
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2 / -3
Query: 440 STKLFNKEQGYIVNSL 393
STKLFNKEQGYIVNSL
Sbjct: 229 STKLFNKEQGYIVNSL 182
Score = 39.6 bits (80), Expect(6) = 3e-043
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 385 SLAKLLTMYPCSLLKSFVL 441
+L KLLTMYPCSLLKS VL
Sbjct: 174 TLVKLLTMYPCSLLKSLVL 230
Score = 39.1 bits (79), Expect(6) = 7e-036
Identities = 15/18 (83%), Positives = 17/18 (94%)
Frame = +3 / +2
Query: 387 AC*TVDNVSLFFVEKFCT 440
+C*T+DNVSLFFVEKF T
Sbjct: 176 SC*TIDNVSLFFVEKFST 229
Score = 38.6 bits (78), Expect(6) = 4e-040
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -2
Query: 441 KYKTFQQRTRIHCQQFSK 388
KY TFQQRTRIHCQ F+K
Sbjct: 230 KY*TFQQRTRIHCQ*FNK 177
Score = 37.7 bits (76), Expect(6) = 3e-050
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = -1 / -1
Query: 267 ELSHDDLRLQNA*LDLF 217
E SHDDLRLQNA*LDLF
Sbjct: 51 ESSHDDLRLQNA*LDLF 1
Score = 35.4 bits (71), Expect(6) = 3e-043
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +2 / +2
Query: 218 KRSSQAF*SLRSSCESS 268
KRSSQAF*SLRSSCE S
Sbjct: 2 KRSSQAF*SLRSSCELS 52
Score = 34.1 bits (68), Expect(6) = 4e-040
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -2 / -2
Query: 263 SHMTISGFKMLDLIS 219
+HMTISGF+MLDLIS
Sbjct: 47 AHMTISGFRMLDLIS 3
Score = 33.1 bits (66), Expect(6) = 7e-036
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1 / +1
Query: 217 KEIKSSILKPEIVM* 261
KEIKSSILKPEIVM*
Sbjct: 1 KEIKSSILKPEIVM* 45
Score = 30.4 bits (60), Expect(4) = 3e-025
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -3 / -3
Query: 262 LT*RSQASKCLT*SL 218
LT*RSQAS+CLT*SL
Sbjct: 46 LT*RSQASECLT*SL 2
Score = 28.6 bits (56), Expect(6) = 3e-050
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -1 / -3
Query: 672 LVQD*IREHIKLHHTWA 622
LVQD*IR + LH+TW+
Sbjct: 457 LVQD*IRTILGLHYTWS 407
Score = 26.7 bits (52), Expect(6) = 4e-040
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = -2 / -1
Query: 671 WYKIKYVNILSYITRG 624
WYKIKY YIT G
Sbjct: 456 WYKIKYEPY*GYITHG 409
Score = 24.4 bits (47), Expect(6) = 3e-043
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2 / +3
Query: 626 HV*CNLICSRI*SCT 670
HV*CN RI*SCT
Sbjct: 411 HV*CNPNMVRI*SCT 455
Score = 21.7 bits (41), Expect(6) = 7e-036
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +3 / +1
Query: 630 CDVT*YVHVFNLVP 671
C+VT VFNLVP
Sbjct: 415 CNVTLIWFVFNLVP 456
>gb|CD210669.1|CD210669 HS1_49_C03.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_49_C03_A012 3', mRNA sequence
Length = 589
Score = 188 bits (404), Expect = 1e-046
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLSRCTVMRG R+K+HAC+S+SIIGWHSTVG+WAR+ENMTILGEDVH D
Sbjct: 87 GPGCVVEAGVRLSRCTVMRGARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCD 266
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 267 EIYSNGGVVLPHKEIKSSILKPEIVM* 347
Score = 109 bits (233), Expect = 4e-023
Identities = 45/82 (54%), Positives = 60/82 (73%)
Frame = -1 / -3
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVRDA 82
SHDDL L++A LDL + E++ A+AV LVT +++L +DGH+L+ CPLSN VP D+A DA
Sbjct: 347 SHDDLGLEDAGLDLLVREHDAAVAVDLVTDVHVLPKDGHVLHACPLSNGGVPSDDAAGDA 168
Query: 81 GMLLDTHTTHDSAAGKPHAILH 16
G+LL HD AAG+PH LH
Sbjct: 167 GVLLHARAAHDGAAGQPHPGLH 102
Score = 97.3 bits (206), Expect(2) = 7e-025
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
RMV+FS RAH PTVECHP+ML E QAC R PRMTVQR+S TP+STTHPG
Sbjct: 241 RMVMFSTRAHFPTVECHPMMLLETQACCFTRAPRMTVQRDSRTPASTTHPG 89
Score = 37.7 bits (76), Expect(2) = 7e-025
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCG 210
HMTISG +MLDLIS CG
Sbjct: 346 HMTISGLRMLDLISLCG 296
>gb|CD219527.1|CD219527 CCC1_57_C08.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_57_C08_A007 3', mRNA sequence
Length = 630
Score = 188 bits (404), Expect = 1e-046
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLSRCTVMRG R+K+HAC+S+SIIGWHSTVG+WAR+ENMTILGEDVH D
Sbjct: 135 GPGCVVEAGVRLSRCTVMRGARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCD 314
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 315 EIYSNGGVVLPHKEIKSSILKPEIVM* 395
Score = 107 bits (228), Expect = 2e-022
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -1 / -2
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVRDA 82
SHDDL L++A LDL + E++ A+AV LV +++L +DGH+L+ CPLSN VP D+A DA
Sbjct: 395 SHDDLGLEDAGLDLLVREHDAAVAVDLVADVHVLPKDGHVLHACPLSNGGVPSDDAAGDA 216
Query: 81 GMLLDTHTTHDSAAGKPHAILH 16
G+LL HD AAG+PH LH
Sbjct: 215 GVLLHARAAHDGAAGQPHPGLH 150
Score = 97.3 bits (206), Expect(2) = 7e-025
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -2 / -3
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
RMV+FS RAH PTVECHP+ML E QAC R PRMTVQR+S TP+STTHPG
Sbjct: 289 RMVMFSTRAHFPTVECHPMMLLETQACCFTRAPRMTVQRDSRTPASTTHPG 137
Score = 37.7 bits (76), Expect(2) = 7e-025
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2 / -3
Query: 260 HMTISGFKMLDLISFCG 210
HMTISG +MLDLIS CG
Sbjct: 394 HMTISGLRMLDLISLCG 344
>gb|CD221819.1|CD221819 CCC1_71_E09.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_71_E09_A007 3', mRNA sequence
Length = 604
Score = 188 bits (404), Expect = 1e-046
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLSRCTVMRG R+K+HAC+S+SIIGWHSTVG+WAR+ENMTILGEDVH D
Sbjct: 71 GPGCVVEAGVRLSRCTVMRGARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCD 250
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 251 EIYSNGGVVLPHKEIKSSILKPEIVM* 331
Score = 107 bits (228), Expect = 2e-022
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -1 / -1
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVRDA 82
SHDDL L++A LDL + E++ A+AV LV +++L +DGH+L+ CPLSN VP D+A DA
Sbjct: 331 SHDDLGLEDAGLDLLVREHDAAVAVDLVADVHVLPKDGHVLHACPLSNGGVPSDDAAGDA 152
Query: 81 GMLLDTHTTHDSAAGKPHAILH 16
G+LL HD AAG+PH LH
Sbjct: 151 GVLLHARAAHDGAAGQPHPGLH 86
Score = 97.3 bits (206), Expect(2) = 7e-025
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -2 / -2
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
RMV+FS RAH PTVECHP+ML E QAC R PRMTVQR+S TP+STTHPG
Sbjct: 225 RMVMFSTRAHFPTVECHPMMLLETQACCFTRAPRMTVQRDSRTPASTTHPG 73
Score = 37.7 bits (76), Expect(2) = 7e-025
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2 / -2
Query: 260 HMTISGFKMLDLISFCG 210
HMTISG +MLDLIS CG
Sbjct: 330 HMTISGLRMLDLISLCG 280
>gb|CD424085.1|CD424085 SA1_3_E09.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_3_E09_A002 3', mRNA sequence
Length = 634
Score = 188 bits (404), Expect = 1e-046
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1 / +3
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLSRCTVMRG R+K+HAC+S+SIIGWHSTVG+WAR+ENMTILGEDVH D
Sbjct: 129 GPGCVVEAGVRLSRCTVMRGARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCD 308
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 309 EIYSNGGVVLPHKEIKSSILKPEIVM* 389
Score = 107 bits (228), Expect = 2e-022
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -1 / -3
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVRDA 82
SHDDL L++A LDL + E++ A+AV LV +++L +DGH+L+ CPLSN VP D+A DA
Sbjct: 389 SHDDLGLEDAGLDLLVREHDAAVAVDLVADVHVLPKDGHVLHACPLSNGGVPSDDAAGDA 210
Query: 81 GMLLDTHTTHDSAAGKPHAILH 16
G+LL HD AAG+PH LH
Sbjct: 209 GVLLHARAAHDGAAGQPHPGLH 144
Score = 97.3 bits (206), Expect(2) = 7e-025
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
RMV+FS RAH PTVECHP+ML E QAC R PRMTVQR+S TP+STTHPG
Sbjct: 283 RMVMFSTRAHFPTVECHPMMLLETQACCFTRAPRMTVQRDSRTPASTTHPG 131
Score = 37.7 bits (76), Expect(2) = 7e-025
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCG 210
HMTISG +MLDLIS CG
Sbjct: 388 HMTISGLRMLDLISLCG 338
>gb|CX616870.1|CX616870 GABR1_30_H12.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_30_H12_A002 3', mRNA sequence
Length = 771
Score = 188 bits (404), Expect = 1e-046
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1 / +2
Query: 1 GPGCVVEDGVRLSRCTVMRGVRIKKHACISNSIIGWHSTVGQWARIENMTILGEDVHGGD 180
GPGCVVE GVRLSRCTVMRG R+K+HAC+S+SIIGWHSTVG+WAR+ENMTILGEDVH D
Sbjct: 275 GPGCVVEAGVRLSRCTVMRGARVKQHACVSSSIIGWHSTVGKWARVENMTILGEDVHVCD 454
Query: 181 EVYSNGGVVLPQKEIKSSILKPEIVM* 261
E+YSNGGVVLP KEIKSSILKPEIVM*
Sbjct: 455 EIYSNGGVVLPHKEIKSSILKPEIVM* 535
Score = 107 bits (228), Expect = 2e-022
Identities = 44/82 (53%), Positives = 59/82 (71%)
Frame = -1 / -3
Query: 261 SHDDLRLQNA*LDLFLWENNTAIAVYLVTPMNILAQDGHILYPCPLSNS*VPPDNAVRDA 82
SHDDL L++A LDL + E++ A+AV LV +++L +DGH+L+ CPLSN VP D+A DA
Sbjct: 535 SHDDLGLEDAGLDLLVREHDAAVAVDLVADVHVLPKDGHVLHACPLSNGGVPSDDAAGDA 356
Query: 81 GMLLDTHTTHDSAAGKPHAILH 16
G+LL HD AAG+PH LH
Sbjct: 355 GVLLHARAAHDGAAGQPHPGLH 290
Score = 97.3 bits (206), Expect(2) = 7e-025
Identities = 38/51 (74%), Positives = 42/51 (82%)
Frame = -2 / -1
Query: 155 RMVIFSIRAHCPTVECHPIMLFEMQACFLIRTPRMTVQRESLTPSSTTHPG 3
RMV+FS RAH PTVECHP+ML E QAC R PRMTVQR+S TP+STTHPG
Sbjct: 429 RMVMFSTRAHFPTVECHPMMLLETQACCFTRAPRMTVQRDSRTPASTTHPG 277
Score = 37.7 bits (76), Expect(2) = 7e-025
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = -2 / -1
Query: 260 HMTISGFKMLDLISFCG 210
HMTISG +MLDLIS CG
Sbjct: 534 HMTISGLRMLDLISLCG 484
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 877,315,407
Number of Sequences: 832831
Number of extensions: 12092104
Number of successful extensions: 93145
Number of sequences better than 1.0e-020: 14
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 20079512258
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)