TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2306429.2.4
(806 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BG948068.1|BG948068 IP1_9_A05.g1_A002 Immature pannicle ... 374 e-116
gb|AW922447.1|AW922447 DG1_19_F09.g1_A002 Dark Grown 1 (DG1... 339 e-110
gb|BG412484.1|BG412484 OV2_34_H07.g1_A002 Ovary 2 (OV2) Sor... 308 e-108
gb|BI075107.1|BI075107 IP1_19_F12.g1_A002 Immature pannicle... 308 e-104
gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sor... 362 5e-099
gb|BG239805.1|BG239805 OV1_29_C04.g1_A002 Ovary 1 (OV1) Sor... 313 6e-098
gb|BI074347.1|BI074347 IP1_14_E12.g1_A002 Immature pannicle... 307 7e-097
gb|BI075135.1|BI075135 IP1_19_D09.g1_A002 Immature pannicle... 311 5e-095
gb|BG356885.1|BG356885 OV2_11_C02.g1_A002 Ovary 2 (OV2) Sor... 302 2e-094
gb|BF704987.1|BF704987 RHIZ2_1_A02.g1_A003 Rhizome2 (RHIZ2)... 322 8e-093
gb|BI075510.1|BI075510 IP1_21_D08.g1_A002 Immature pannicle... 300 1e-091
gb|BF481476.1|BF481476 FM1_19_F05.g1_A003 Floral-Induced Me... 317 2e-091
gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sor... 303 3e-090
gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sor... 294 9e-088
gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sor... 303 2e-081
gb|CW241422.1|CW241422 104_700_11218762_148_37541_037 Sorgh... 230 2e-080
gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated ... 269 3e-080
gb|BG559003.1|BG559003 RHIZ2_53_D04.g1_A003 Rhizome2 (RHIZ2... 246 3e-076
gb|BZ367053.1|BZ367053 id02b04.b1 WGS-SbicolorF (JM107 adap... 213 2e-075
gb|BF481302.1|BF481302 FM1_18_C08.g1_A003 Floral-Induced Me... 235 7e-075
gb|BI097917.1|BI097917 IP1_29_F08.g1_A002 Immature pannicle... 192 2e-073
gb|BG412485.1|BG412485 OV2_34_H08.g1_A002 Ovary 2 (OV2) Sor... 275 6e-073
gb|CW092082.1|CW092082 104_454_10998932_116_33041_074 Sorgh... 190 1e-072
gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infecte... 231 8e-069
gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum m... 150 1e-063
gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum m... 150 7e-063
gb|CD222337.1|CD222337 CCC1_21_H03.b1_A007 Callus culture/c... 236 4e-061
gb|BG158722.1|BG158722 RHIZ2_44_D05.g1_A003 Rhizome2 (RHIZ2... 214 2e-054
gb|BG356442.1|BG356442 EM1_22_F02.g1_A002 Embryo 1 (EM1) So... 208 8e-053
gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Me... 192 7e-048
gb|AW923660.1|AW923660 DG1_57_B08.g1_A002 Dark Grown 1 (DG1... 188 9e-047
gb|CF488801.1|CF488801 POL1_52_G01.b1_A002 Pollen Sorghum b... 178 7e-044
gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed see... 177 1e-043
gb|CF489056.1|CF489056 POL1_54_D01.b1_A002 Pollen Sorghum b... 177 3e-043
gb|CF483885.1|CF483885 POL1_1_G10.b1_A002 Pollen Sorghum bi... 176 5e-043
gb|BG355936.2|BG355936 EM1_18_E01.g1_A002 Embryo 1 (EM1) So... 175 7e-043
gb|BE359792.1|BE359792 DG1_57_B08.g2_A002 Dark Grown 1 (DG1... 175 9e-043
gb|CF480940.1|CF480940 POL1_69_B07.b1_A002 Pollen Sorghum b... 172 5e-042
gb|AI724868.1|AI724868 RHIZ1_30_D02.y3_A001 Rhizome1 (RHIZ1... 96 6e-041
gb|CW304526.1|CW304526 104_789_11465829_116_35701_087 Sorgh... 91 6e-041
gb|BG558112.1|BG558112 RHIZ2_67_A03.g1_A003 Rhizome2 (RHIZ2... 109 2e-039
gb|CF487354.1|CF487354 POL1_43_F12.b1_A002 Pollen Sorghum b... 163 3e-039
gb|CF486029.1|CF486029 POL1_35_F05.b1_A002 Pollen Sorghum b... 162 5e-039
gb|CW154736.1|CW154736 104_557_11145760_148_36357_064 Sorgh... 70 1e-037
gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkali... 96 2e-037
gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkal... 96 2e-037
gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sor... 96 2e-037
gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkal... 92 3e-036
gb|CF481153.1|CF481153 POL1_70_G02.b1_A002 Pollen Sorghum b... 147 2e-034
gb|CL165781.1|CL165781 104_361_10808896_116_31821_112 Sorgh... 91 3e-034
gb|CF485542.1|CF485542 POL1_32_E01.b1_A002 Pollen Sorghum b... 146 5e-034
gb|CW116495.1|CW116495 104_492_11107149_116_34608_093 Sorgh... 89 2e-032
gb|CW304527.1|CW304527 104_789_11465829_148_35705_087 Sorgh... 66 5e-032
gb|BI075368.1|BI075368 IP1_19_F12.b1_A002 Immature pannicle... 81 2e-031
gb|CN144836.1|CN144836 WOUND1_25_F02.b2_A002 Wounded leaves... 101 3e-031
gb|CF484384.1|CF484384 POL1_25_B01.b1_A002 Pollen Sorghum b... 136 5e-031
gb|BG932995.1|BG932995 DG1_69_H05.g1_A002 Dark Grown 1 (DG1... 96 4e-030
gb|CD232824.1|CD232824 SS1_10_A10.b1_A012 Salt-stressed see... 90 1e-029
gb|BG465923.1|BG465923 RHIZ2_46_C08.g1_A003 Rhizome2 (RHIZ2... 102 1e-029
gb|BF586798.1|BF586798 FM1_30_E01.g1_A003 Floral-Induced Me... 89 1e-029
gb|AF253508.1|AF253508 Sorghum bicolor cyanogenic beta-gluc... 88 2e-029
gb|CN151024.1|CN151024 WOUND1_73_B01.b1_A002 Wounded leaves... 90 2e-029
gb|BG102626.1|BG102626 RHIZ2_35_C12.g1_A003 Rhizome2 (RHIZ2... 88 2e-029
gb|BG051974.1|BG051974 RHIZ2_7_C12.g1_A003 Rhizome2 (RHIZ2)... 88 2e-029
gb|BF480877.1|BF480877 FM1_14_D08.g1_A003 Floral-Induced Me... 88 2e-029
gb|BG053045.1|BG053045 RHIZ2_16_G09.g1_A003 Rhizome2 (RHIZ2... 88 2e-029
gb|BF587655.1|BF587655 FM1_39_B01.g1_A003 Floral-Induced Me... 88 2e-029
gb|BG051497.1|BG051497 FM1_57_C05.g1_A003 Floral-Induced Me... 88 2e-029
gb|BG101840.1|BG101840 RHIZ2_23_A11.g1_A003 Rhizome2 (RHIZ2... 88 2e-029
gb|BF585521.1|BF585521 FM1_23_E04.g1_A003 Floral-Induced Me... 88 2e-029
gb|BF586331.1|BF586331 FM1_27_E10.g1_A003 Floral-Induced Me... 88 2e-029
gb|BG103531.1|BG103531 RHIZ2_37_F08.g1_A003 Rhizome2 (RHIZ2... 88 2e-029
gb|CD203975.1|CD203975 HS1_3_G04.b1_A012 Heat-shocked seedl... 88 4e-029
gb|CN134551.1|CN134551 OX1_27_C03.b1_A002 Oxidatively-stres... 89 5e-029
gb|CN136482.1|CN136482 OX1_43_G11.b1_A002 Oxidatively-stres... 88 5e-029
gb|CN152460.1|CN152460 WOUND1_82_E09.b1_A002 Wounded leaves... 88 5e-029
gb|CN145795.1|CN145795 WOUND1_35_G08.b1_A002 Wounded leaves... 88 5e-029
gb|CN138826.1|CN138826 OX1_14_E07.b1_A002 Oxidatively-stres... 88 5e-029
gb|CN149178.1|CN149178 WOUND1_61_E05.b1_A002 Wounded leaves... 88 5e-029
gb|CN149689.1|CN149689 WOUND1_64_G04.b1_A002 Wounded leaves... 88 5e-029
gb|CN144829.1|CN144829 WOUND1_25_E06.b2_A002 Wounded leaves... 88 5e-029
gb|CX616676.1|CX616676 GABR1_29_F11.b1_A002 GA- or brassino... 88 5e-029
gb|CN146873.1|CN146873 WOUND1_44_H01.b1_A002 Wounded leaves... 88 5e-029
gb|CX614786.1|CX614786 GABR1_16_G01.b1_A002 GA- or brassino... 88 5e-029
gb|CX617521.1|CX617521 GABR1_34_E12.b1_A002 GA- or brassino... 88 5e-029
gb|CN148248.1|CN148248 WOUND1_55_D01.b1_A002 Wounded leaves... 88 5e-029
gb|CN143583.1|CN143583 WOUND1_17_D11.b1_A002 Wounded leaves... 88 5e-029
gb|CN148653.1|CN148653 WOUND1_58_A03.b1_A002 Wounded leaves... 88 5e-029
gb|CX619557.1|CX619557 GABR1_46_F01.b1_A002 GA- or brassino... 88 5e-029
gb|CN147921.1|CN147921 WOUND1_53_C12.b1_A002 Wounded leaves... 88 5e-029
gb|CX621480.1|CX621480 GABR1_58_H03.b1_A002 GA- or brassino... 88 5e-029
gb|CX623153.1|CX623153 GABR1_68_B11.b1_A002 GA- or brassino... 88 5e-029
gb|CF430453.1|CF430453 PH1_28_H07.b1_A002 Phosphorous-defic... 88 5e-029
gb|CX622795.1|CX622795 GABR1_66_B07.b1_A002 GA- or brassino... 88 5e-029
gb|CD204463.1|CD204463 HS1_8_D11.b1_A012 Heat-shocked seedl... 88 5e-029
gb|CN148873.1|CN148873 WOUND1_59_G12.b1_A002 Wounded leaves... 88 5e-029
gb|CX613095.1|CX613095 GABR1_6_F02.b1_A002 GA- or brassinol... 88 5e-029
gb|CX615252.1|CX615252 GABR1_19_B10.b1_A002 GA- or brassino... 88 5e-029
gb|CD232362.1|CD232362 SS1_45_D11.b1_A012 Salt-stressed see... 88 5e-029
gb|CD213899.1|CD213899 HS1_69_A08.b1_A012 Heat-shocked seed... 88 5e-029
gb|CN143427.1|CN143427 WOUND1_16_E08.b1_A002 Wounded leaves... 88 5e-029
gb|CN145174.1|CN145174 WOUND1_27_F04.b2_A002 Wounded leaves... 88 5e-029
gb|CX618715.1|CX618715 GABR1_41_F03.b1_A002 GA- or brassino... 88 5e-029
gb|CN132570.1|CN132570 OX1_7_A08.b1_A002 Oxidatively-stress... 88 5e-029
gb|CN144266.1|CN144266 WOUND1_21_D08.b1_A002 Wounded leaves... 88 5e-029
gb|CD428325.1|CD428325 ETH1_31_E07.b1_A002 Ethylene-treated... 88 5e-029
gb|CN143911.1|CN143911 WOUND1_19_D01.b1_A002 Wounded leaves... 88 5e-029
gb|CX617315.1|CX617315 GABR1_33_B07.b1_A002 GA- or brassino... 88 5e-029
gb|CD213908.1|CD213908 HS1_69_G10.b1_A012 Heat-shocked seed... 88 5e-029
gb|CN148222.1|CN148222 WOUND1_55_A03.b1_A002 Wounded leaves... 88 5e-029
gb|CX615576.1|CX615576 GABR1_21_A06.b1_A002 GA- or brassino... 88 5e-029
gb|CD210399.1|CD210399 HS1_51_F10.b1_A012 Heat-shocked seed... 88 5e-029
gb|CB924788.1|CB924788 ABA1_28_G05.b1_A012 Abscisic acid-tr... 88 5e-029
gb|CD209345.1|CD209345 HS1_42_D07.b1_A012 Heat-shocked seed... 88 5e-029
gb|CD463431.1|CD463431 ETH1_44_H06.b1_A002 Ethylene-treated... 88 5e-029
gb|CD213451.1|CD213451 HS1_41_D04.b1_A012 Heat-shocked seed... 88 5e-029
gb|CN144419.1|CN144419 WOUND1_22_D03.b1_A002 Wounded leaves... 88 5e-029
gb|CX617692.1|CX617692 GABR1_35_E09.b1_A002 GA- or brassino... 88 5e-029
gb|CD230588.1|CD230588 SS1_47_A08.b1_A012 Salt-stressed see... 88 5e-029
gb|CD461983.1|CD461983 SA1_36_E11.b1_A002 Salicylic acid-tr... 88 5e-029
gb|CX621929.1|CX621929 GABR1_61_B07.b2_A002 GA- or brassino... 88 5e-029
gb|CB924927.1|CB924927 ABA1_29_G03.b1_A012 Abscisic acid-tr... 88 5e-029
gb|BE357079.1|BE357079 DG1_146_H03.g1_A002 Dark Grown 1 (DG... 88 5e-029
gb|CD211400.1|CD211400 HS1_60_H01.b1_A012 Heat-shocked seed... 88 5e-029
gb|BE357078.1|BE357078 DG1_146_H04.g1_A002 Dark Grown 1 (DG... 88 5e-029
gb|CF433417.1|CF433417 NIT1_27_A12.b1_A002 Nitrogen-deficie... 88 5e-029
gb|CD206973.1|CD206973 HS1_26_H04.b1_A012 Heat-shocked seed... 88 5e-029
gb|CD208382.1|CD208382 HS1_37_A07.b1_A012 Heat-shocked seed... 88 5e-029
gb|CD230120.1|CD230120 SS1_41_F06.b1_A012 Salt-stressed see... 88 5e-029
gb|CN132473.1|CN132473 OX1_6_H06.b1_A002 Oxidatively-stress... 88 5e-029
gb|CN142003.1|CN142003 WOUND1_3_F05.b1_A002 Wounded leaves ... 88 5e-029
gb|CD235414.1|CD235414 SS1_29_H09.b1_A012 Salt-stressed see... 88 5e-029
gb|CD428892.1|CD428892 ETH1_1_F07.b1_A002 Ethylene-treated ... 88 5e-029
gb|CN142009.1|CN142009 WOUND1_3_G01.b1_A002 Wounded leaves ... 88 5e-029
gb|CN152041.1|CN152041 WOUND1_79_H03.b1_A002 Wounded leaves... 88 5e-029
gb|CD426503.1|CD426503 SA1_21_D04.b1_A002 Salicylic acid-tr... 88 5e-029
gb|CD232272.1|CD232272 SS1_39_F07.b1_A012 Salt-stressed see... 88 5e-029
gb|AW565734.1|AW565734 LG1_348_H08.g1_A002 Light Grown 1 (L... 88 5e-029
gb|CD426739.1|CD426739 SA1_25_F08.b1_A002 Salicylic acid-tr... 88 5e-029
gb|CD213064.1|CD213064 HS1_28_A05.b1_A012 Heat-shocked seed... 88 5e-029
gb|CN132808.1|CN132808 OX1_8_H01.b1_A002 Oxidatively-stress... 88 5e-029
gb|CB924610.1|CB924610 ABA1_1_C01.b1_A012 Abscisic acid-tre... 88 5e-029
gb|CD214077.1|CD214077 HS1_70_E04.b1_A012 Heat-shocked seed... 88 5e-029
gb|BM318271.1|BM318271 PI1_80_E11.g9_A002 Pathogen induced ... 88 5e-029
gb|CX621634.1|CX621634 GABR1_59_F08.b1_A002 GA- or brassino... 88 5e-029
gb|CD210149.1|CD210149 HS1_57_D05.b1_A012 Heat-shocked seed... 88 5e-029
gb|U33817.1|SBU33817 Sorghum bicolor dhurrinase mRNA, nucle... 91 7e-029
gb|CN128121.1|CN128121 RHOH1_27_D08.b1_A002 Acid- and alkal... 91 7e-029
gb|DN552724.1|DN552724 pSHR-RT-MR-H1_E05_S217 pSHR Sorghum ... 88 7e-029
gb|CX614275.1|CX614275 GABR1_13_C10.b1_A002 GA- or brassino... 91 7e-029
gb|DN552712.1|DN552712 pSHR-RT-MR-H1_B06_C383 pSHR Sorghum ... 88 7e-029
gb|DN552528.1|DN552528 pSHR-RT-A-H1_C03_C331 pSHR Sorghum h... 88 7e-029
gb|DN552694.1|DN552694 pSHR-RT-MR-H1_C05_C331 pSHR Sorghum ... 88 7e-029
gb|BE361473.1|BE361473 DG1_72_G02.g1_A002 Dark Grown 1 (DG1... 91 7e-029
gb|BE358119.1|BE358119 DG1_24_H05.g1_A002 Dark Grown 1 (DG1... 91 7e-029
gb|BE358884.1|BE358884 DG1_32_G02.g1_A002 Dark Grown 1 (DG1... 91 7e-029
gb|AI723853.1|AI723853 RHIZ1_28_C08.y1_A001 Rhizome1 (RHIZ1... 88 7e-029
gb|BE357387.1|BE357387 DG1_15_B06.b2_A002 Dark Grown 1 (DG1... 91 7e-029
gb|BE356746.1|BE356746 DG1_12_B04.g1_A002 Dark Grown 1 (DG1... 91 7e-029
gb|CD210097.1|CD210097 HS1_57_F09.b1_A012 Heat-shocked seed... 87 1e-028
gb|CN145904.1|CN145904 WOUND1_36_C07.b1_A002 Wounded leaves... 86 2e-028
gb|CN151687.1|CN151687 WOUND1_77_A09.b1_A002 Wounded leaves... 86 2e-028
gb|CX619661.1|CX619661 GABR1_47_B01.b1_A002 GA- or brassino... 86 2e-028
gb|CN143409.1|CN143409 WOUND1_16_C08.b1_A002 Wounded leaves... 101 2e-028
gb|CN135186.1|CN135186 OX1_31_D03.b1_A002 Oxidatively-stres... 88 2e-028
gb|CD231994.1|CD231994 SS1_31_E11.b1_A012 Salt-stressed see... 96 3e-028
gb|CN145798.1|CN145798 WOUND1_35_G12.b1_A002 Wounded leaves... 85 3e-028
gb|BF481839.1|BF481839 FM1_22_A09.g1_A003 Floral-Induced Me... 88 3e-028
gb|CD213196.1|CD213196 HS1_29_A11.b1_A012 Heat-shocked seed... 88 3e-028
gb|CX615873.1|CX615873 GABR1_24_B10.b1_A002 GA- or brassino... 85 3e-028
gb|CX613988.1|CX613988 GABR1_11_H11.b1_A002 GA- or brassino... 88 3e-028
gb|CX615723.1|CX615723 GABR1_22_F02.b1_A002 GA- or brassino... 89 5e-028
gb|CD207069.1|CD207069 HS1_27_D10.b1_A012 Heat-shocked seed... 85 5e-028
gb|CF433098.1|CF433098 NIT1_25_G09.b1_A002 Nitrogen-deficie... 88 6e-028
gb|CX620964.1|CX620964 GABR1_55_D10.b1_A002 GA- or brassino... 84 6e-028
gb|CN145514.1|CN145514 WOUND1_33_H12.b1_A002 Wounded leaves... 84 9e-028
gb|CX614453.1|CX614453 GABR1_14_E02.b1_A002 GA- or brassino... 91 9e-028
gb|BE596935.1|BE596935 PI1_60_D01.g1_A002 Pathogen induced ... 102 9e-028
gb|CF488637.1|CF488637 POL1_51_F04.b1_A002 Pollen Sorghum b... 125 1e-027
gb|CN145942.1|CN145942 WOUND1_36_H04.b1_A002 Wounded leaves... 88 1e-027
gb|CX615129.1|CX615129 GABR1_18_G09.b1_A002 GA- or brassino... 91 2e-027
gb|CD424047.1|CD424047 SA1_3_E10.b1_A002 Salicylic acid-tre... 88 2e-027
gb|BG464390.1|BG464390 EM1_69_B10.g1_A002 Embryo 1 (EM1) So... 91 2e-027
gb|AW671821.1|AW671821 LG1_351_F12.g1_A002 Light Grown 1 (L... 95 2e-027
gb|CN148093.1|CN148093 WOUND1_54_D09.b1_A002 Wounded leaves... 84 8e-027
gb|CN146061.1|CN146061 WOUND1_37_E11.b1_A002 Wounded leaves... 85 1e-026
gb|CD210870.1|CD210870 HS1_66_F09.b1_A012 Heat-shocked seed... 79 2e-026
gb|BG051535.1|BG051535 FM1_57_G01.g1_A003 Floral-Induced Me... 120 2e-026
gb|CW161502.1|CW161502 104_568_11150448_116_36436_090 Sorgh... 119 5e-026
gb|CN147899.1|CN147899 WOUND1_53_A07.b1_A002 Wounded leaves... 84 5e-026
gb|BM328168.1|BM328168 PIC1_21_H06.g1_A002 Pathogen-infecte... 105 5e-026
gb|BE360002.1|BE360002 DG1_60_H01.g2_A002 Dark Grown 1 (DG1... 91 7e-026
gb|BF422097.1|BF422097 FM1_12_H01.g1_A003 Floral-Induced Me... 88 1e-025
gb|BF587567.1|BF587567 FM1_38_A04.g1_A003 Floral-Induced Me... 88 1e-025
gb|CX621923.1|CX621923 GABR1_61_A11.b2_A002 GA- or brassino... 88 2e-025
gb|CX618845.1|CX618845 GABR1_42_B07.b1_A002 GA- or brassino... 88 2e-025
gb|CN124461.1|CN124461 RHOH1_5_A02.b1_A002 Acid- and alkali... 89 5e-025
gb|CW422227.1|CW422227 fsbb001f131g13k0 Sorghum methylation... 69 7e-025
gb|BG241512.1|BG241512 RHIZ2_50_C04.g1_A003 Rhizome2 (RHIZ2... 102 9e-025
gb|CW226825.1|CW226825 104_665_11205092_116_37226_080 Sorgh... 68 9e-025
gb|CD232396.1|CD232396 SS1_45_D02.b1_A012 Salt-stressed see... 88 4e-024
gb|CF771891.1|CF771891 DSBF1_25_F02.g1_A010 Drought-stresse... 106 6e-024
gb|CB924804.1|CB924804 ABA1_28_G12.b1_A012 Abscisic acid-tr... 88 8e-024
gb|CN141820.1|CN141820 WOUND1_2_C04.b1_A002 Wounded leaves ... 88 8e-024
gb|CW498861.1|CW498861 fsbb001f293f01k0 Sorghum methylation... 68 2e-023
gb|CN145862.1|CN145862 WOUND1_35_F12.g1_A002 Wounded leaves... 71 2e-023
gb|BG559169.1|BG559169 RHIZ2_55_E04.g1_A003 Rhizome2 (RHIZ2... 88 3e-023
gb|CD461465.1|CD461465 SA1_32_D07.b1_A002 Salicylic acid-tr... 91 5e-023
gb|BE359233.1|BE359233 DG1_39_G12.g1_A002 Dark Grown 1 (DG1... 91 5e-023
gb|BE361214.1|BE361214 DG1_70_H03.g1_A002 Dark Grown 1 (DG1... 91 5e-023
gb|AW923243.1|AW923243 DG1_50_B11.g1_A002 Dark Grown 1 (DG1... 91 5e-023
gb|BE360562.1|BE360562 DG1_64_C07.b1_A002 Dark Grown 1 (DG1... 91 5e-023
gb|BG053035.1|BG053035 RHIZ2_16_F06.g1_A003 Rhizome2 (RHIZ2... 66 9e-023
gb|CD231980.1|CD231980 SS1_31_G03.b1_A012 Salt-stressed see... 88 9e-023
gb|CD205133.1|CD205133 HS1_12_A10.b1_A012 Heat-shocked seed... 88 9e-023
gb|CB925873.1|CB925873 ABA1_30_D12.b1_A012 Abscisic acid-tr... 88 9e-023
gb|BG053414.1|BG053414 RHIZ2_8_E09.g1_A003 Rhizome2 (RHIZ2)... 86 9e-023
gb|CD233911.1|CD233911 SS1_5_B11.b1_A012 Salt-stressed seed... 96 1e-022
gb|BF586059.1|BF586059 FM1_26_B07.g1_A003 Floral-Induced Me... 90 1e-022
gb|CL165780.1|CL165780 104_361_10808896_114_31820_112 Sorgh... 61 2e-022
gb|CN148717.1|CN148717 WOUND1_58_H04.b1_A002 Wounded leaves... 87 2e-022
gb|BG559728.1|BG559728 RHIZ2_72_H05.g1_A003 Rhizome2 (RHIZ2... 88 2e-022
gb|CD204671.1|CD204671 HS1_9_C05.b1_A012 Heat-shocked seedl... 87 2e-022
gb|BF422210.1|BF422210 FM1_13_D06.g1_A003 Floral-Induced Me... 88 3e-022
gb|BG103225.1|BG103225 RHIZ2_19_G03.g1_A003 Rhizome2 (RHIZ2... 90 3e-022
gb|BG052581.1|BG052581 RHIZ2_25_C09.g1_A003 Rhizome2 (RHIZ2... 88 3e-022
gb|CX612899.1|CX612899 GABR1_5_C11.b1_A002 GA- or brassinol... 75 4e-022
gb|CX614107.1|CX614107 GABR1_12_C12.b1_A002 GA- or brassino... 75 4e-022
gb|CX616148.1|CX616148 GABR1_26_D10.b1_A002 GA- or brassino... 91 5e-022
gb|CF430559.1|CF430559 NIT1_3_G08.b1_A002 Nitrogen-deficien... 89 5e-022
gb|AW286262.1|AW286262 LG1_329_E04.g1_A002 Light Grown 1 (L... 88 6e-022
gb|AW286277.1|AW286277 LG1_329_G04.g1_A002 Light Grown 1 (L... 88 6e-022
gb|AW284016.1|AW284016 LG1_264_G03.g1_A002 Light Grown 1 (L... 88 6e-022
gb|BF586779.1|BF586779 FM1_30_C04.g1_A003 Floral-Induced Me... 88 6e-022
gb|CW391208.1|CW391208 fsbb001f077d18f0 Sorghum methylation... 72 8e-022
gb|CD212567.1|CD212567 HS1_6_E05.b1_A012 Heat-shocked seedl... 88 1e-021
gb|CD230338.1|CD230338 SS1_43_H07.b1_A012 Salt-stressed see... 88 1e-021
gb|CD233774.1|CD233774 SS1_4_B05.b1_A012 Salt-stressed seed... 88 1e-021
gb|CW143523.1|CW143523 104_535_11137466_116_34955_009 Sorgh... 72 1e-021
gb|CF431284.1|CF431284 NIT1_5_A06.b1_A002 Nitrogen-deficien... 66 2e-021
gb|CN150415.1|CN150415 WOUND1_69_B07.b1_A002 Wounded leaves... 89 2e-021
gb|CN150262.1|CN150262 WOUND1_68_B05.b1_A002 Wounded leaves... 73 2e-021
gb|BM328243.1|BM328243 PIC1_22_G06.g1_A002 Pathogen-infecte... 102 6e-021
gb|CW299705.1|CW299705 104_782_11463260_148_35687_068 Sorgh... 69 6e-021
>gb|BG948068.1|BG948068 IP1_9_A05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 636
Score = 374 bits (811), Expect(2) = e-116
Identities = 147/155 (94%), Positives = 151/155 (97%)
Frame = +3 / +1
Query: 33 VQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYIT 212
+Q PSSYSADWQVQYVFARNGKPIGP+ANS WLYI PTGMYGCVNYLKEKYGNPT+YIT
Sbjct: 1 LQQTPSSYSADWQVQYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYIT 180
Query: 213 ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGY 392
ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GY
Sbjct: 181 ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGY 360
Query: 393 SSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL 497
SSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL
Sbjct: 361 SSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL 465
Score = 318 bits (689), Expect(2) = 5e-099
Identities = 142/154 (92%), Positives = 142/154 (92%)
Frame = -2 / -2
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 464 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 285
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 284 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 105
Query: 136 *SHLEFACGPIGLPLRAKTY*TCQSAE*LLGASW 35
*S LEFA GPIGLPLRAKTY TCQSAE*LLG W
Sbjct: 104 *SQLEFAFGPIGLPLRAKTYWTCQSAE*LLGVCW 3
Score = 298 bits (645), Expect(2) = 4e-090
Identities = 127/166 (76%), Positives = 143/166 (86%)
Frame = -1 / -1
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 498 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 319
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 318 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 139
Query: 170 VHAPVHPRRGDVEPLRIRLWSNRFAIACKNILNLPIGRVATGRQLD 33
VH +HPRR DV+P+RIRLWSN FAIACKNIL+LPIGRVATGR L+
Sbjct: 138 VHTSIHPRRDDVKPIRIRLWSNWFAIACKNILDLPIGRVATGRLLE 1
Score = 284 bits (615), Expect(2) = 3e-087
Identities = 121/153 (79%), Positives = 131/153 (85%)
Frame = +2 / +3
Query: 47 Q*LLCRLAGSICFCTQWQTDWTTGEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNG 226
Q*LLCRLAG ICFCTQWQT+WT GEF*+ALHRPDGDV + ELPQGEVWESN LH E NG
Sbjct: 15 Q*LLCRLAGPICFCTQWQTNWTKGEF*LALHRPDGDVWMCELPQGEVWESNCLHYREWNG 194
Query: 227 PAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVR 406
AWKLDP PVPAR H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV
Sbjct: 195 SAWKLDP*PVPARCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVW 374
Query: 407 HRLRGLQHARTPPEGVGLLVQGHASEALRSPEP 505
HRLR LQ+ART P+GVGLLVQGHASEALRS P
Sbjct: 375 HRLR*LQYARTAPQGVGLLVQGHASEALRSLGP 473
Score = 240 bits (518), Expect(2) = 8e-072
Identities = 104/149 (69%), Positives = 109/149 (73%)
Frame = -3 / -3
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 472 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 293
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 292 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 113
Query: 144 XRCRAT*NSPVVQSVCHCVQKHIEPANRQ 58
RC+A *NSP+VQ VCHCVQKHI PANRQ
Sbjct: 112 GRCKAN*NSPLVQLVCHCVQKHIGPANRQ 26
Score = 174 bits (375), Expect(2) = 2e-050
Identities = 79/104 (75%), Positives = 84/104 (80%)
Frame = +1 / +2
Query: 34 SSWRPVATLPIGRFNMFLHAMANRLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQRST*R 213
SS RPVATLPIGR NMFLHAMAN+LD RRIL G TS RRGC *TTSRRSMGIQ ST
Sbjct: 2 SSRRPVATLPIGRSNMFLHAMANQLDQRRILIGFTSSRRGCMDV*TTSRRSMGIQLSTLP 181
Query: 214 RTEWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
R EW SLET*P TSTCA P+GCGST AT AS*++P* R +TWLA
Sbjct: 182 RMEWISLET*PVTSTCAMPQGCGSTEATLAS*KKP*IRAQTWLA 313
Score = 66.1 bits (138), Expect(2) = e-116
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 491 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 598
Score = 64.8 bits (135), Expect(2) = 5e-099
Identities = 28/41 (68%), Positives = 33/41 (80%)
Frame = -3 / -1
Query: 645 NTQHHN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
N+ HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 612 NSGMHNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 490
Score = 59.3 bits (123), Expect(2) = 3e-087
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +3
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 489 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 599
Score = 55.1 bits (114), Expect(2) = 4e-090
Identities = 25/41 (60%), Positives = 26/41 (63%)
Frame = -1 / -2
Query: 644 THNITIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
T TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 611 TXECTIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 489
Score = 52.4 bits (108), Expect(2) = 8e-072
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+Q IGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 601 AQFIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 488
Score = 48.7 bits (100), Expect(2) = 2e-050
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNG+K + R IV
Sbjct: 490 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREPLR*IV 600
>gb|AW922447.1|AW922447 DG1_19_F09.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 634
Score = 339 bits (735), Expect(3) = e-110
Identities = 133/138 (96%), Positives = 136/138 (98%)
Frame = +3 / +3
Query: 84 FARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLR 263
FARNGKPIGP+ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLR
Sbjct: 42 FARNGKPIGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLR 221
Query: 264 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERH 443
DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERH
Sbjct: 222 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERH 401
Query: 444 PKASAYWFRDMLQKH*DL 497
PKASAYWFRDMLQKH*DL
Sbjct: 402 PKASAYWFRDMLQKH*DL 455
Score = 288 bits (624), Expect(3) = 7e-094
Identities = 129/138 (93%), Positives = 129/138 (93%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 454 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 275
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 274 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 95
Query: 136 *SHLEFACGPIGLPLRAK 83
*S LEFA GPIGLPLRAK
Sbjct: 94 *SQLEFAFGPIGLPLRAK 41
Score = 266 bits (576), Expect(3) = 9e-084
Identities = 113/149 (75%), Positives = 127/149 (85%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 488 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 309
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 308 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 129
Query: 170 VHAPVHPRRGDVEPLRIRLWSNRFAIACK 84
VH +HPRR DV+P+RIRLWSN FAIACK
Sbjct: 128 VHTSIHPRRDDVKPIRIRLWSNWFAIACK 42
Score = 259 bits (561), Expect(3) = 5e-084
Identities = 110/141 (78%), Positives = 120/141 (85%)
Frame = +2 / +2
Query: 83 FCTQWQTDWTTGEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPA 262
FCTQWQT+WT GEF*+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPA
Sbjct: 41 FCTQWQTNWTKGEF*LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPA 220
Query: 263 RRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTP 442
R H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART
Sbjct: 221 RCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTA 400
Query: 443 PEGVGLLVQGHASEALRSPEP 505
P+GVGLLVQGHASEALRS P
Sbjct: 401 PQGVGLLVQGHASEALRSLGP 463
Score = 221 bits (477), Expect(3) = 3e-067
Identities = 96/144 (66%), Positives = 103/144 (71%)
Frame = -3 / -2
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 462 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 283
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 282 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 103
Query: 144 XRCRAT*NSPVVQSVCHCVQKHIE 73
RC+A *NSP+VQ VCHCVQ ++
Sbjct: 102 GRCKAN*NSPLVQLVCHCVQNILD 31
Score = 142 bits (304), Expect(3) = 4e-044
Identities = 64/87 (73%), Positives = 69/87 (79%)
Frame = +1 / +1
Query: 85 LHAMANRLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCA 264
LHAMAN+LD RRIL G TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA
Sbjct: 43 LHAMANQLDQRRILIGFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCA 222
Query: 265 TPRGCGSTGATSAS*RRP*TRERTWLA 345
P+GCGST AT AS*++P* R +TWLA
Sbjct: 223 MPQGCGSTEATLAS*KKP*IRAQTWLA 303
Score = 66.1 bits (138), Expect(3) = e-110
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +1
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 481 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 588
Score = 63.4 bits (132), Expect(3) = 7e-094
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -3 / -3
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 590 HNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 480
Score = 59.3 bits (123), Expect(3) = 5e-084
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 479 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 589
Score = 53.8 bits (111), Expect(3) = 9e-084
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 589 TIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 479
Score = 52.4 bits (108), Expect(3) = 3e-067
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+Q IGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 591 AQFIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 478
Score = 48.7 bits (100), Expect(3) = 4e-044
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNG+K + R IV
Sbjct: 480 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREPLR*IV 590
Score = 35.9 bits (72), Expect(3) = e-110
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 45 PSSYSADWQVQYV 83
PSSYSADWQVQYV
Sbjct: 4 PSSYSADWQVQYV 42
Score = 33.1 bits (66), Expect(3) = 7e-094
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -1 / -2
Query: 86 KNILNLPIGRVATGR 42
+NIL+LPIGRVATGR
Sbjct: 45 QNILDLPIGRVATGR 1
Score = 33.1 bits (66), Expect(3) = 5e-084
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 43 RPVATLPIGRFNMF 84
RPVATLPIGR NMF
Sbjct: 2 RPVATLPIGRSNMF 43
Score = 30.9 bits (61), Expect(3) = 9e-084
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = -2 / -3
Query: 94 LRAKTY*TCQSAE*LLG 44
+ KTY TCQSAE*LLG
Sbjct: 53 IACKTYWTCQSAE*LLG 3
Score = 30.4 bits (60), Expect(3) = 4e-044
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +2 / +3
Query: 47 Q*LLCRLAGSICF 85
Q*LLCRLAG ICF
Sbjct: 6 Q*LLCRLAGPICF 44
Score = 22.1 bits (42), Expect(3) = 3e-067
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -3 / -1
Query: 84 KHIEPANRQ 58
KHI PANRQ
Sbjct: 43 KHIGPANRQ 17
>gb|BG412484.1|BG412484 OV2_34_H07.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 654
Score = 308 bits (668), Expect(3) = e-108
Identities = 121/125 (96%), Positives = 123/125 (98%)
Frame = +3 / +2
Query: 123 SKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIG 302
S WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIG
Sbjct: 2 SNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIG 181
Query: 303 QLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQ 482
QLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQ
Sbjct: 182 QLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQ 361
Query: 483 KH*DL 497
KH*DL
Sbjct: 362 KH*DL 376
Score = 261 bits (564), Expect(3) = 8e-095
Identities = 117/125 (93%), Positives = 117/125 (93%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 375 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 196
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 195 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 16
Query: 136 *SHLE 122
*S LE
Sbjct: 15 *SQLE 1
Score = 237 bits (513), Expect(3) = 1e-081
Identities = 101/136 (74%), Positives = 115/136 (84%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 409 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 230
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 229 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 50
Query: 170 VHAPVHPRRGDVEPLR 123
VH +HPRR DV+P+R
Sbjct: 49 VHTSIHPRRDDVKPIR 2
Score = 226 bits (488), Expect(3) = 2e-079
Identities = 99/128 (77%), Positives = 108/128 (84%)
Frame = +2 / +1
Query: 122 F*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHR 301
F*+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH
Sbjct: 1 F*LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHW 180
Query: 302 PAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHAS 481
PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQGHAS
Sbjct: 181 PAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHAS 360
Query: 482 EALRSPEP 505
EALRS P
Sbjct: 361 EALRSLGP 384
Score = 191 bits (412), Expect(3) = 9e-062
Identities = 85/127 (66%), Positives = 89/127 (70%)
Frame = -3 / -2
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 383 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 204
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 203 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 24
Query: 144 XRCRAT* 124
RC+A *
Sbjct: 23 GRCKAN* 3
Score = 116 bits (248), Expect(3) = 4e-041
Identities = 53/74 (71%), Positives = 57/74 (77%)
Frame = +1 / +3
Query: 124 LSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSA 303
L G TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST AT A
Sbjct: 3 LIGFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLA 182
Query: 304 S*RRP*TRERTWLA 345
S*++P* R +TWLA
Sbjct: 183 S*KKP*IRAQTWLA 224
Score = 66.1 bits (138), Expect(3) = e-108
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +3
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 402 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 509
Score = 63.8 bits (133), Expect(3) = 8e-095
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1 / -2
Query: 719 LSISNTINQHDKITTAQTPERTYPQTHNI 633
LSISN INQHDKITT+QTP+RTY QTHNI
Sbjct: 617 LSISNKINQHDKITTSQTPQRTYSQTHNI 531
Score = 63.4 bits (132), Expect(3) = 8e-095
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -3 / -3
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 511 HNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 401
Score = 59.3 bits (123), Expect(3) = 2e-079
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +1
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 400 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 510
Score = 58.8 bits (122), Expect(3) = e-108
Identities = 22/38 (57%), Positives = 27/38 (71%)
Frame = +2 / +2
Query: 635 CCVFVGMFSLEFELWLFYRVG*SCLKCLIQDCDISSCF 748
CC FV MFS+ FE+WLFYRV *S LKCL+++ F
Sbjct: 533 CCEFVSMFSVAFEMWLFYRVD*SYLKCLVRNVTFXRVF 646
Score = 53.8 bits (111), Expect(3) = 1e-081
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 510 TIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 400
Score = 52.8 bits (109), Expect(3) = 1e-081
Identities = 25/39 (64%), Positives = 27/39 (69%)
Frame = -2 / -3
Query: 751 VKTTRDVTVLN*AFQTRSTNTIK*PQLKLQREHTHKHTT 635
+K R V +*AFQ RS NTIK*P LK REHTHK TT
Sbjct: 649 LKNPRKCHVPD*AFQIRSINTIK*PHLKRHREHTHKLTT 533
Score = 52.4 bits (108), Expect(3) = 9e-062
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+Q IGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 512 AQFIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 399
Score = 51.0 bits (105), Expect(3) = 2e-079
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / +3
Query: 633 DVVCLWVCSLWSLSCGYFIVLVDRV*NA*FRT 728
+VV L VCSLW L CGYFIVL+D +*NA* T
Sbjct: 531 NVVSL*VCSLWRLRCGYFIVLIDLI*NA*SGT 626
Score = 48.7 bits (100), Expect(3) = 4e-041
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +2
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNG+K + R IV
Sbjct: 401 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREPLR*IV 511
Score = 46.0 bits (94), Expect(3) = 4e-041
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +1 / +1
Query: 634 MLCVCGYVLSGV*AVVILSCWLIVFEMLN 720
ML VC YVL GV* VVILSC LI+FEML+
Sbjct: 532 ML*VCEYVLCGV*DVVILSC*LILFEMLS 618
Score = 33.6 bits (67), Expect(3) = 9e-062
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3 / -1
Query: 717 KHFKHDQPTRXXXXXXXSRENIPTNTQH 634
KHFK DQ TR + ENI TN+QH
Sbjct: 615 KHFK*DQSTR*NNHISNATENILTNSQH 532
>gb|BI075107.1|BI075107 IP1_19_F12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 592
Score = 308 bits (668), Expect(3) = e-104
Identities = 121/125 (96%), Positives = 123/125 (98%)
Frame = +3 / +2
Query: 123 SKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIG 302
S WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIG
Sbjct: 2 SNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIG 181
Query: 303 QLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQ 482
QLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQ
Sbjct: 182 QLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQ 361
Query: 483 KH*DL 497
KH*DL
Sbjct: 362 KH*DL 376
Score = 261 bits (564), Expect(3) = 7e-090
Identities = 117/125 (93%), Positives = 117/125 (93%)
Frame = -2 / -2
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 375 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 196
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 195 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 16
Query: 136 *SHLE 122
*S LE
Sbjct: 15 *SQLE 1
Score = 237 bits (513), Expect(3) = 9e-077
Identities = 101/136 (74%), Positives = 115/136 (84%)
Frame = -1 / -1
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 409 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 230
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 229 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 50
Query: 170 VHAPVHPRRGDVEPLR 123
VH +HPRR DV+P+R
Sbjct: 49 VHTSIHPRRDDVKPIR 2
Score = 226 bits (488), Expect(3) = 1e-075
Identities = 99/128 (77%), Positives = 108/128 (84%)
Frame = +2 / +1
Query: 122 F*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHR 301
F*+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH
Sbjct: 1 F*LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHW 180
Query: 302 PAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHAS 481
PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQGHAS
Sbjct: 181 PAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHAS 360
Query: 482 EALRSPEP 505
EALRS P
Sbjct: 361 EALRSLGP 384
Score = 191 bits (412), Expect(2) = 3e-057
Identities = 85/127 (66%), Positives = 89/127 (70%)
Frame = -3 / -3
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 383 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 204
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 203 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 24
Query: 144 XRCRAT* 124
RC+A *
Sbjct: 23 GRCKAN* 3
Score = 116 bits (248), Expect(3) = 1e-037
Identities = 53/74 (71%), Positives = 57/74 (77%)
Frame = +1 / +3
Query: 124 LSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSA 303
L G TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST AT A
Sbjct: 3 LIGFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLA 182
Query: 304 S*RRP*TRERTWLA 345
S*++P* R +TWLA
Sbjct: 183 S*KKP*IRAQTWLA 224
Score = 66.1 bits (138), Expect(3) = e-104
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +3
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 402 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 509
Score = 63.4 bits (132), Expect(3) = 7e-090
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -3 / -1
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 511 HNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 401
Score = 59.3 bits (123), Expect(3) = 1e-075
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +1
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 400 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 510
Score = 53.8 bits (111), Expect(3) = 9e-077
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1 / -2
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 510 TIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 400
Score = 52.4 bits (108), Expect(2) = 3e-057
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -3
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+Q IGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 512 AQFIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 399
Score = 48.7 bits (100), Expect(3) = 1e-037
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +2
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNG+K + R IV
Sbjct: 401 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREPLR*IV 511
Score = 47.3 bits (97), Expect(3) = 7e-090
Identities = 17/20 (85%), Positives = 19/20 (95%)
Frame = -1 / -3
Query: 692 HDKITTAQTPERTYPQTHNI 633
HDKITT+QTP+RTY QTHNI
Sbjct: 590 HDKITTSQTPQRTYSQTHNI 531
Score = 44.6 bits (91), Expect(3) = e-104
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = +2 / +2
Query: 635 CCVFVGMFSLEFELWLFYRV 694
CC FV MFS+ FE+WLFYRV
Sbjct: 533 CCEFVSMFSVAFEMWLFYRV 592
Score = 38.6 bits (78), Expect(3) = 1e-075
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3 / +3
Query: 633 DVVCLWVCSLWSLSCGYFIV 692
+VV L VCSLW L CGYFIV
Sbjct: 531 NVVSL*VCSLWRLRCGYFIV 590
Score = 36.3 bits (73), Expect(3) = 9e-077
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = -2 / -1
Query: 694 NTIK*PQLKLQREHTHKHTT 635
+TIK*P LK REHTHK TT
Sbjct: 592 HTIK*PHLKRHREHTHKLTT 533
Score = 34.1 bits (68), Expect(3) = 1e-037
Identities = 16/20 (80%), Positives = 16/20 (80%)
Frame = +1 / +1
Query: 634 MLCVCGYVLSGV*AVVILSC 693
ML VC YVL GV* VVILSC
Sbjct: 532 ML*VCEYVLCGV*DVVILSC 591
>gb|BG412794.1|BG412794 OV2_34_H07.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 562
Score = 362 bits (784), Expect = 5e-099
Identities = 143/151 (94%), Positives = 147/151 (97%)
Frame = +3 / +1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
TSSYMKGQKL+Q PSSYSADWQVQYVFARNGKPIGP+ANS WLYI PTGMYGCVNYLKE
Sbjct: 109 TSSYMKGQKLLQQTPSSYSADWQVQYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKE 288
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
KYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL
Sbjct: 289 KYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 468
Query: 363 LDNFEWLAGYSSKFGIVYVDFNTLERHPKAS 455
LDNFEWL+GYSSKFGIVYVDFNTLERHPKAS
Sbjct: 469 LDNFEWLSGYSSKFGIVYVDFNTLERHPKAS 561
Score = 314 bits (679), Expect = 1e-084
Identities = 138/151 (91%), Positives = 139/151 (92%)
Frame = -2 / -3
Query: 454 DAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRT 275
DA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SMAFFSWPM*LL*NRT
Sbjct: 560 DALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM*LL*NRT 381
Query: 274 LVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGPIGLP 95
LVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M*S LEFA GPIGLP
Sbjct: 380 LVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFAFGPIGLP 201
Query: 94 LRAKTY*TCQSAE*LLGASWTSFCPFM*LDV 2
LRAKTY TCQSAE*LLG W+SFCPFM*LDV
Sbjct: 200 LRAKTYWTCQSAE*LLGVCWSSFCPFM*LDV 108
Score = 277 bits (599), Expect = 2e-073
Identities = 116/151 (76%), Positives = 132/151 (87%)
Frame = -1 / -2
Query: 455 RRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPH 276
RRL V FER+EV+VDDA+LGRV QPLEVV+ERPGEVASHV +L+YG QLA+VA VEPH
Sbjct: 561 RRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANVASVEPH 382
Query: 275 PRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRLWSNRFA 96
P G+AQVLV+GQVSRL+HS+L VD WIPILLLEVVH +HPRR DV+P+RIRLWSN FA
Sbjct: 381 PCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRLWSNWFA 202
Query: 95 IACKNILNLPIGRVATGRQLDQLLPLHVAGC 3
IACKNIL+LPIGRVATGR L+Q L LHVAGC
Sbjct: 201 IACKNILDLPIGRVATGRLLEQFLSLHVAGC 109
Score = 263 bits (569), Expect = 2e-069
Identities = 111/151 (73%), Positives = 121/151 (80%)
Frame = +2 / +3
Query: 2 HIQLHXXXXXXXXXXQ*LLCRLAGSICFCTQWQTDWTTGEF*VALHRPDGDVRVRELPQG 181
HIQLH Q*LLCRLAG ICFCTQWQT+WT GEF*+ALHRPDGDV + ELPQG
Sbjct: 108 HIQLHEGTETAPADAQ*LLCRLAGPICFCTQWQTNWTKGEF*LALHRPDGDVWMCELPQG 287
Query: 182 EVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVS 361
EVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH PAE+ HR G +RGWLLRLVS
Sbjct: 288 EVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVS 467
Query: 362 PRQLRVAGRVLVQVRHRLRGLQHARTPPEGV 454
P QLRVA R+LVQV HRLR LQ+ART P+GV
Sbjct: 468 P*QLRVAVRILVQVWHRLR*LQYARTAPQGV 560
Score = 216 bits (466), Expect = 4e-055
Identities = 94/152 (61%), Positives = 99/152 (65%)
Frame = -3 / -1
Query: 456 PTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTA 277
PTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P LW SAG+CS CRTA
Sbjct: 562 PTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRPDLWLFSAGQCSFCRTA 383
Query: 276 PSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSPVVQSVC 97
P W RAGTG GSSFQA PF S CR LDSH RC+A *NSP+VQ VC
Sbjct: 382 PLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPSGRCKAN*NSPLVQLVC 203
Query: 96 HCVQKHIEPANRQXXXXXXXXXXXXXXXSWMC 1
HCVQKHI PANRQ SWMC
Sbjct: 202 HCVQKHIGPANRQSSYWASAGAVSVPSCSWMC 107
Score = 192 bits (413), Expect = 7e-048
Identities = 87/115 (75%), Positives = 93/115 (80%)
Frame = +1 / +2
Query: 1 THPAT*RGRSWSSWRPVATLPIGRFNMFLHAMANRLDHRRILSGSTSPRRGCTGA*TTSR 180
THPAT*R R+ SS RPVATLPIGR NMFLHAMAN+LD RRIL G TS RRGC *TTSR
Sbjct: 107 THPAT*RDRNCSSRRPVATLPIGRSNMFLHAMANQLDQRRILIGFTSSRRGCMDV*TTSR 286
Query: 181 RSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
RSMGIQ ST R EW SLET*P TSTCA P+GCGST AT AS*++P* R +TWLA
Sbjct: 287 RSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLAS*KKP*IRAQTWLA 451
>gb|BG239805.1|BG239805 OV1_29_C04.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 526
Score = 313 bits (678), Expect(2) = 6e-098
Identities = 123/127 (96%), Positives = 125/127 (98%)
Frame = +3 / +3
Query: 117 ANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSY 296
ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSY
Sbjct: 3 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSY 182
Query: 297 IGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDM 476
IGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDM
Sbjct: 183 IGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDM 362
Query: 477 LQKH*DL 497
LQKH*DL
Sbjct: 363 LQKH*DL 383
Score = 265 bits (574), Expect(2) = 8e-083
Identities = 119/127 (93%), Positives = 119/127 (93%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 382 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 203
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 202 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 23
Query: 136 *SHLEFA 116
*S LEFA
Sbjct: 22 *SQLEFA 2
Score = 242 bits (522), Expect(2) = 8e-073
Identities = 103/138 (74%), Positives = 117/138 (84%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 416 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 237
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 236 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 57
Query: 170 VHAPVHPRRGDVEPLRIR 117
VH +HPRR DV+P+RIR
Sbjct: 56 VHTSIHPRRDDVKPIRIR 3
Score = 231 bits (499), Expect(2) = 3e-071
Identities = 101/130 (77%), Positives = 110/130 (84%)
Frame = +2 / +2
Query: 116 GEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQEL 295
GEF*+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+L
Sbjct: 2 GEF*LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKL 181
Query: 296 HRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGH 475
H PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQGH
Sbjct: 182 HWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGH 361
Query: 476 ASEALRSPEP 505
ASEALRS P
Sbjct: 362 ASEALRSLGP 391
Score = 199 bits (429), Expect(2) = 1e-059
Identities = 88/130 (67%), Positives = 92/130 (70%)
Frame = -3 / -2
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 390 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 211
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 210 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 31
Query: 144 XRCRAT*NSP 115
RC+A *NSP
Sbjct: 30 GRCKAN*NSP 1
Score = 122 bits (262), Expect(2) = 4e-035
Identities = 56/77 (72%), Positives = 60/77 (77%)
Frame = +1 / +1
Query: 115 RRILSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGA 294
RRIL G TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST A
Sbjct: 1 RRILIGFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEA 180
Query: 295 TSAS*RRP*TRERTWLA 345
T AS*++P* R +TWLA
Sbjct: 181 TLAS*KKP*IRAQTWLA 231
Score = 66.1 bits (138), Expect(2) = 6e-098
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +1
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 409 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 516
Score = 63.4 bits (132), Expect(2) = 8e-083
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -3 / -3
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 518 HNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 408
Score = 59.3 bits (123), Expect(2) = 3e-071
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 407 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 517
Score = 53.8 bits (111), Expect(2) = 8e-073
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 517 TIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 407
Score = 52.4 bits (108), Expect(2) = 1e-059
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+Q IGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 519 AQFIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 406
Score = 48.7 bits (100), Expect(2) = 4e-035
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNG+K + R IV
Sbjct: 408 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREPLR*IV 518
>gb|BI074347.1|BI074347 IP1_14_E12.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 576
Score = 307 bits (664), Expect(3) = 7e-097
Identities = 120/123 (97%), Positives = 122/123 (99%)
Frame = +3 / +2
Query: 129 WLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQL 308
WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQL
Sbjct: 2 WLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQL 181
Query: 309 KKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH 488
KKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH
Sbjct: 182 KKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH 361
Query: 489 *DL 497
*DL
Sbjct: 362 *DL 370
Score = 257 bits (555), Expect(3) = 9e-084
Identities = 115/122 (94%), Positives = 115/122 (94%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 369 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 190
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 189 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 10
Query: 136 *S 131
*S
Sbjct: 9 *S 4
Score = 234 bits (506), Expect(3) = 4e-073
Identities = 100/134 (74%), Positives = 113/134 (84%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 403 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 224
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 223 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 44
Query: 170 VHAPVHPRRGDVEP 129
VH +HPRR DV+P
Sbjct: 43 VHTSIHPRRDDVKP 2
Score = 223 bits (481), Expect(3) = 5e-069
Identities = 97/126 (76%), Positives = 106/126 (84%)
Frame = +2 / +1
Query: 128 VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPA 307
+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH PA
Sbjct: 1 LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHWPA 180
Query: 308 EEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHASEA 487
E+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQGHASEA
Sbjct: 181 EKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHASEA 360
Query: 488 LRSPEP 505
LRS P
Sbjct: 361 LRSLGP 378
Score = 191 bits (411), Expect(2) = 3e-056
Identities = 84/125 (67%), Positives = 88/125 (70%)
Frame = -3 / -2
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 377 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 198
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 197 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 18
Query: 144 XRCRA 130
RC+A
Sbjct: 17 GRCKA 3
Score = 115 bits (246), Expect(3) = 2e-033
Identities = 52/72 (72%), Positives = 56/72 (77%)
Frame = +1 / +3
Query: 130 GSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS* 309
G TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST AT AS*
Sbjct: 3 GFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLAS* 182
Query: 310 RRP*TRERTWLA 345
++P* R +TWLA
Sbjct: 183 KKP*IRAQTWLA 218
Score = 61.6 bits (128), Expect(3) = 7e-097
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2 / +3
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPD 625
TILFSFA C G PNGSNPA CLA+KMG K+S+ +
Sbjct: 396 TILFSFASCFGLPNGSNPALCLASKMGVKESHSE 497
Score = 59.7 bits (124), Expect(3) = 9e-084
Identities = 24/31 (77%), Positives = 28/31 (90%)
Frame = -3 / -3
Query: 615 LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 487 LSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 395
Score = 55.1 bits (114), Expect(3) = 5e-069
Identities = 24/43 (55%), Positives = 27/43 (62%)
Frame = +3 / +1
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINCDVVCLW 650
V FCSA P V D PMVQI+ AWL KWE + ATP + LW
Sbjct: 394 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPSELCIPKLW 522
Score = 52.4 bits (108), Expect(3) = 4e-073
Identities = 24/43 (55%), Positives = 25/43 (58%)
Frame = -1 / -1
Query: 650 PQTHNITIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
P N R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 522 P*LRNAQFTRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 394
Score = 49.2 bits (101), Expect(2) = 3e-056
Identities = 23/43 (53%), Positives = 27/43 (62%)
Frame = -2 / -2
Query: 649 HKHTTSQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
H +GVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 521 HNFGMHNSLGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 393
Score = 47.3 bits (97), Expect(3) = 2e-033
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +2
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNK 609
Y+FVQL LVF +AQWFKS V G QNG+K
Sbjct: 395 YYFVQLCLVFWIAQWFKSSLVLG*QNGSK 481
Score = 34.5 bits (69), Expect(3) = 9e-084
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -1 / -2
Query: 680 TTAQTPERTYPQTHNIT 630
T +QTP+RTY QTHNI+
Sbjct: 575 TPSQTPQRTYSQTHNIS 525
Score = 28.6 bits (56), Expect(3) = 4e-073
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2 / -3
Query: 679 PQLKLQREHTHKHTT 635
P LK REHTHK TT
Sbjct: 574 PPLKRHREHTHKLTT 530
Score = 26.7 bits (52), Expect(3) = 7e-097
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 635 CCVFVGMFSLEFE 673
CC FV MFS+ FE
Sbjct: 530 CCEFVSMFSVAFE 568
Score = 23.5 bits (45), Expect(3) = 5e-069
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3 / +3
Query: 633 DVVCLWVCSLWSLSCG 680
+VV L VCSLW L G
Sbjct: 528 NVVSL*VCSLWRLRGG 575
Score = 21.7 bits (41), Expect(3) = 2e-033
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1 / +1
Query: 634 MLCVCGYVLSGV* 672
ML VC YVL GV*
Sbjct: 529 ML*VCEYVLCGV* 567
>gb|BI075135.1|BI075135 IP1_19_D09.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 553
Score = 311 bits (674), Expect(2) = 5e-095
Identities = 122/126 (96%), Positives = 124/126 (98%)
Frame = +3 / +1
Query: 120 NSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYI 299
NS WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYI
Sbjct: 1 NSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYI 180
Query: 300 GQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDML 479
GQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDML
Sbjct: 181 GQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDML 360
Query: 480 QKH*DL 497
QKH*DL
Sbjct: 361 QKH*DL 378
Score = 261 bits (564), Expect(2) = 8e-080
Identities = 117/125 (93%), Positives = 117/125 (93%)
Frame = -2 / -3
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 377 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 198
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 197 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 18
Query: 136 *SHLE 122
*S LE
Sbjct: 17 *SQLE 3
Score = 239 bits (517), Expect(2) = 7e-071
Identities = 102/137 (74%), Positives = 116/137 (84%)
Frame = -1 / -2
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 411 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 232
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 231 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 52
Query: 170 VHAPVHPRRGDVEPLRI 120
VH +HPRR DV+P+RI
Sbjct: 51 VHTSIHPRRDDVKPIRI 1
Score = 226 bits (488), Expect(2) = 3e-066
Identities = 99/128 (77%), Positives = 108/128 (84%)
Frame = +2 / +3
Query: 122 F*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHR 301
F*+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH
Sbjct: 3 F*LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHW 182
Query: 302 PAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHAS 481
PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQGHAS
Sbjct: 183 PAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHAS 362
Query: 482 EALRSPEP 505
EALRS P
Sbjct: 363 EALRSLGP 386
Score = 194 bits (418), Expect(2) = 5e-055
Identities = 86/128 (67%), Positives = 90/128 (70%)
Frame = -3 / -1
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 385 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 206
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 205 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 26
Query: 144 XRCRAT*N 121
RC+A *N
Sbjct: 25 GRCKAN*N 2
Score = 118 bits (252), Expect(2) = 6e-033
Identities = 54/75 (72%), Positives = 58/75 (77%)
Frame = +1 / +2
Query: 121 ILSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATS 300
IL G TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST AT
Sbjct: 2 ILIGFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATL 181
Query: 301 AS*RRP*TRERTWLA 345
AS*++P* R +TWLA
Sbjct: 182 AS*KKP*IRAQTWLA 226
Score = 58.3 bits (121), Expect(2) = 5e-095
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +2 / +2
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKD 613
TILFSFA C G PNGSNPA CLA+KMG K+
Sbjct: 404 TILFSFASCFGLPNGSNPALCLASKMGVKE 493
Score = 57.9 bits (120), Expect(2) = 8e-080
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -3 / -2
Query: 612 SFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
SF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 492 SFTPILLAKHKAGFEPLGNPKHEAKLNKIV 403
Score = 49.6 bits (102), Expect(2) = 7e-071
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -1 / -3
Query: 608 LFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 488 LLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 402
Score = 47.3 bits (97), Expect(2) = 3e-066
Identities = 20/29 (68%), Positives = 23/29 (79%)
Frame = +1 / +1
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNK 609
Y+FVQL LVF +AQWFKS V G QNG+K
Sbjct: 403 YYFVQLCLVFWIAQWFKSSLVLG*QNGSK 489
Score = 46.0 bits (94), Expect(2) = 6e-033
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +3 / +3
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWE 605
V FCSA P V D PMVQI+ AWL KWE
Sbjct: 402 VLFCSALPRVLDCPMVQIQPCAWLAKWE 485
Score = 41.8 bits (85), Expect(2) = 5e-055
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -2 / -1
Query: 604 SHFGSQALSRI*TIGPSQTLGEAEQNGT 521
SHF SQA I*TIG S+T G+AEQN T
Sbjct: 484 SHFASQAQGWI*TIGQSKTRGKAEQNST 401
>gb|BG356885.1|BG356885 OV2_11_C02.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 545
Score = 302 bits (653), Expect(2) = 2e-094
Identities = 119/122 (97%), Positives = 121/122 (99%)
Frame = +3 / +1
Query: 132 LYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLK 311
LYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLK
Sbjct: 1 LYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLK 180
Query: 312 KAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH* 491
KAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*
Sbjct: 181 KAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH* 360
Query: 492 DL 497
DL
Sbjct: 361 DL 366
Score = 255 bits (551), Expect(2) = 1e-079
Identities = 114/121 (94%), Positives = 114/121 (94%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 365 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 186
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 185 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 6
Query: 136 * 134
*
Sbjct: 5 * 3
Score = 231 bits (499), Expect(2) = 1e-069
Identities = 99/133 (74%), Positives = 112/133 (84%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 399 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 220
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 219 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 40
Query: 170 VHAPVHPRRGDVE 132
VH +HPRR DV+
Sbjct: 39 VHTSIHPRRDDVK 1
Score = 221 bits (476), Expect(2) = 4e-068
Identities = 96/124 (77%), Positives = 104/124 (83%)
Frame = +2 / +3
Query: 134 LHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEE 313
LHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH PAE+
Sbjct: 3 LHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHWPAEK 182
Query: 314 GHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHASEALR 493
HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQGHASEALR
Sbjct: 183 SHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHASEALR 362
Query: 494 SPEP 505
S P
Sbjct: 363 SLGP 374
Score = 190 bits (410), Expect(2) = 5e-057
Identities = 81/106 (76%), Positives = 84/106 (79%)
Frame = -3 / -2
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 373 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 194
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSH 187
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 193 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSH 56
Score = 113 bits (242), Expect(2) = 2e-032
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = +1 / +2
Query: 136 TSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS*RR 315
TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST AT AS*++
Sbjct: 5 TSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLAS*KK 184
Query: 316 P*TRERTWLA 345
P* R +TWLA
Sbjct: 185 P*IRAQTWLA 214
Score = 66.1 bits (138), Expect(2) = 2e-094
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 392 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 499
Score = 63.4 bits (132), Expect(2) = 1e-079
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -3 / -3
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 501 HNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 391
Score = 59.3 bits (123), Expect(2) = 4e-068
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +3
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 390 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 500
Score = 53.8 bits (111), Expect(2) = 1e-069
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 500 TIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 390
Score = 52.4 bits (108), Expect(2) = 5e-057
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -2
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+Q IGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 502 AQFIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 389
Score = 48.7 bits (100), Expect(2) = 2e-032
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +1
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNG+K + R IV
Sbjct: 391 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREPLR*IV 501
>gb|BF704987.1|BF704987 RHIZ2_1_A02.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 479
Score = 322 bits (697), Expect(2) = 8e-093
Identities = 127/134 (94%), Positives = 130/134 (97%)
Frame = +3 / +2
Query: 105 IGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRF 284
IGP+ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRF
Sbjct: 5 IGPKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRF 184
Query: 285 YRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYW 464
YRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYW
Sbjct: 185 YRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYW 364
Query: 465 FRDMLQKH*DLQSR 506
FRDMLQKH*DL R
Sbjct: 365 FRDMLQKH*DL*GR 406
Score = 265 bits (574), Expect(2) = 3e-076
Identities = 121/131 (92%), Positives = 121/131 (92%)
Frame = -2 / -3
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 396 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 217
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRY SRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 216 AFFSWPM*LL*NRTLVASRRY*SRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 37
Query: 136 *SHLEFACGPI 104
*S LEFA GPI
Sbjct: 36 *SQLEFAFGPI 4
Score = 254 bits (549), Expect(2) = 8e-072
Identities = 106/142 (74%), Positives = 122/142 (85%)
Frame = -1 / -2
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP +ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 430 KIVLPSGSAALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 251
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVL++GQVSRL+HS+L VD WIPILLLEV
Sbjct: 250 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLITGQVSRLIHSILGNVDSWIPILLLEV 71
Query: 170 VHAPVHPRRGDVEPLRIRLWSN 105
VH +HPRR DV+P+RIRLWSN
Sbjct: 70 VHTSIHPRRDDVKPIRIRLWSN 5
Score = 235 bits (507), Expect(2) = 2e-065
Identities = 102/134 (76%), Positives = 112/134 (83%)
Frame = +2 / +1
Query: 104 DWTTGEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAV 283
+WT GEF*+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP VPAR H+GAV
Sbjct: 4 NWTKGEF*LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*SVPARCHKGAV 183
Query: 284 LQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLL 463
LQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLL
Sbjct: 184 LQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLL 363
Query: 464 VQGHASEALRSPEP 505
VQGHASEALRS P
Sbjct: 364 VQGHASEALRSLGP 405
Score = 200 bits (432), Expect(2) = 2e-053
Identities = 89/133 (66%), Positives = 94/133 (70%)
Frame = -3 / -1
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 404 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 225
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGT GSSFQA PF S CR LDSH
Sbjct: 224 DLWLFSAGQCSFCRTAPLWHRAGTDHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 45
Query: 144 XRCRAT*NSPVVQ 106
RC+A *NSP+VQ
Sbjct: 44 GRCKAN*NSPLVQ 6
Score = 125 bits (267), Expect(2) = 3e-033
Identities = 57/81 (70%), Positives = 62/81 (76%)
Frame = +1 / +3
Query: 103 RLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCG 282
+LD RRIL G TS RRGC *TTSRRSMGIQ ST R EW SLET*P STCA P+GCG
Sbjct: 3 QLDQRRILIGFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVISTCAMPQGCG 182
Query: 283 STGATSAS*RRP*TRERTWLA 345
ST AT AS*++P* R +TWLA
Sbjct: 183 STEATLAS*KKP*IRAQTWLA 245
Score = 41.4 bits (84), Expect(2) = 3e-076
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3 / -2
Query: 579 AGFEPLGHPKH*AKLNKMV 523
AGFEPLG+PKH AKLNK+V
Sbjct: 478 AGFEPLGNPKHEAKLNKIV 422
Score = 40.5 bits (82), Expect(2) = 8e-093
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 524 TILFSFA*CLGWPNGSNPA 580
TILFSFA C G PNGSNPA
Sbjct: 423 TILFSFASCFGLPNGSNPA 479
Score = 38.2 bits (77), Expect(2) = 3e-033
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1 / +3
Query: 463 GSGTCFRSIEISRAEPEHGRYHFVQLRLVFGM 558
GSGTCFRSIEISRA G FG+
Sbjct: 363 GSGTCFRSIEISRAAEPEGSTILFSFASCFGL 458
Score = 38.2 bits (77), Expect(2) = 8e-072
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -3
Query: 575 DLNHWAIPNTRRS*TKWY 522
DLNHWAI NTR+S*TK Y
Sbjct: 474 DLNHWAIQNTRQS*TK*Y 421
Score = 36.3 bits (73), Expect(2) = 2e-065
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 523 YHFVQLRLVFGMAQWFKS 576
Y+FVQL LVF +AQWFKS
Sbjct: 422 YYFVQLCLVFWIAQWFKS 475
Score = 29.9 bits (59), Expect(2) = 2e-053
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 574 I*TIGPSQTLGEAEQNGT 521
I*TIG S+T G+AEQN T
Sbjct: 473 I*TIGQSKTRGKAEQNST 420
>gb|BI075510.1|BI075510 IP1_21_D08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 539
Score = 300 bits (649), Expect(2) = 1e-091
Identities = 118/121 (97%), Positives = 120/121 (99%)
Frame = +3 / +2
Query: 135 YIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKK 314
YI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKK
Sbjct: 2 YIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKK 181
Query: 315 AIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*D 494
AIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*D
Sbjct: 182 AIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*D 361
Query: 495 L 497
L
Sbjct: 362 L 364
Score = 255 bits (551), Expect(2) = 5e-078
Identities = 114/121 (94%), Positives = 114/121 (94%)
Frame = -2 / -3
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 363 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 184
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 183 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 4
Query: 136 * 134
*
Sbjct: 3 * 1
Score = 231 bits (498), Expect(2) = 3e-068
Identities = 99/132 (75%), Positives = 111/132 (84%)
Frame = -1 / -2
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 397 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 218
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEV
Sbjct: 217 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEV 38
Query: 170 VHAPVHPRRGDV 135
VH +HPRR DV
Sbjct: 37 VHTSIHPRRDDV 2
Score = 221 bits (476), Expect(2) = 5e-065
Identities = 96/124 (77%), Positives = 104/124 (83%)
Frame = +2 / +1
Query: 134 LHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEE 313
LHRPDGDV + ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH PAE+
Sbjct: 1 LHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHWPAEK 180
Query: 314 GHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHASEALR 493
HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQGHASEALR
Sbjct: 181 SHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHASEALR 360
Query: 494 SPEP 505
S P
Sbjct: 361 SLGP 372
Score = 190 bits (410), Expect(2) = 7e-054
Identities = 81/106 (76%), Positives = 84/106 (79%)
Frame = -3 / -1
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 371 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 192
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSH 187
LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 191 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSH 54
Score = 113 bits (242), Expect(2) = 1e-031
Identities = 51/70 (72%), Positives = 55/70 (78%)
Frame = +1 / +3
Query: 136 TSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS*RR 315
TS RRGC *TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST AT AS*++
Sbjct: 3 TSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLAS*KK 182
Query: 316 P*TRERTWLA 345
P* R +TWLA
Sbjct: 183 P*IRAQTWLA 212
Score = 58.3 bits (121), Expect(2) = 1e-091
Identities = 23/30 (76%), Positives = 25/30 (83%)
Frame = +2 / +3
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKD 613
TILFSFA C G PNGSNPA CLA+KMG K+
Sbjct: 390 TILFSFASCFGLPNGSNPALCLASKMGVKE 479
Score = 57.9 bits (120), Expect(2) = 5e-078
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = -3 / -2
Query: 612 SFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
SF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 478 SFTPILLAKHKAGFEPLGNPKHEAKLNKIV 389
Score = 49.6 bits (102), Expect(2) = 3e-068
Identities = 21/29 (72%), Positives = 22/29 (75%)
Frame = -1 / -3
Query: 608 LFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 474 LLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 388
Score = 48.7 bits (100), Expect(2) = 5e-065
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = +1 / +2
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPR 624
Y+FVQL LVF +AQWFKS V G QNG+K + R
Sbjct: 389 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREATR 490
Score = 46.0 bits (94), Expect(2) = 1e-031
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +3 / +1
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWE 605
V FCSA P V D PMVQI+ AWL KWE
Sbjct: 388 VLFCSALPRVLDCPMVQIQPCAWLAKWE 471
Score = 41.8 bits (85), Expect(2) = 7e-054
Identities = 19/28 (67%), Positives = 21/28 (75%)
Frame = -2 / -1
Query: 604 SHFGSQALSRI*TIGPSQTLGEAEQNGT 521
SHF SQA I*TIG S+T G+AEQN T
Sbjct: 470 SHFASQAQGWI*TIGQSKTRGKAEQNST 387
>gb|BF481476.1|BF481476 FM1_19_F05.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 500
Score = 317 bits (687), Expect(2) = 2e-091
Identities = 125/132 (94%), Positives = 128/132 (96%)
Frame = +3 / +2
Query: 111 PQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYR 290
P+ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYR
Sbjct: 2 PKANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYR 181
Query: 291 SYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFR 470
SYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFR
Sbjct: 182 SYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFR 361
Query: 471 DMLQKH*DLQSR 506
DMLQKH*DL R
Sbjct: 362 DMLQKH*DL*GR 397
Score = 260 bits (563), Expect(2) = 1e-074
Identities = 119/129 (92%), Positives = 119/129 (92%)
Frame = -2 / -3
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 387 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 208
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM 137
AFFSWPM*LL*NRTLVASRRY SRVKFPG SIPFSVM* VGFPYFSLR*FTHPYIPVG M
Sbjct: 207 AFFSWPM*LL*NRTLVASRRY*SRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPYIPVGTM 28
Query: 136 *SHLEFACG 110
*S LEFA G
Sbjct: 27 *SQLEFAFG 1
Score = 249 bits (539), Expect(2) = 2e-070
Identities = 104/140 (74%), Positives = 120/140 (85%)
Frame = -1 / -2
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP +ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 421 KIVLPSGSAALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 242
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEV 171
EVASHV +L+YG QLA+VA VEPHP G+AQVL++GQVSRL+HS+L VD WIPILLLEV
Sbjct: 241 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLITGQVSRLIHSILGNVDSWIPILLLEV 62
Query: 170 VHAPVHPRRGDVEPLRIRLW 111
VH +HPRR DV+P+RIRLW
Sbjct: 61 VHTSIHPRRDDVKPIRIRLW 2
Score = 229 bits (495), Expect(2) = 7e-064
Identities = 101/132 (76%), Positives = 110/132 (83%)
Frame = +2 / +1
Query: 110 TTGEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQ 289
T GEF*+ALHRPDGDV + ELPQGEVWESN LH E NG AWKLDP VPAR H+GAVLQ
Sbjct: 1 TKGEF*LALHRPDGDVWMCELPQGEVWESNCLHYREWNGSAWKLDP*SVPARCHKGAVLQ 180
Query: 290 ELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQ 469
+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART P+GVGLLVQ
Sbjct: 181 KLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQ 360
Query: 470 GHASEALRSPEP 505
GHASEALRS P
Sbjct: 361 GHASEALRSLGP 396
Score = 196 bits (423), Expect(2) = 4e-052
Identities = 87/131 (66%), Positives = 92/131 (70%)
Frame = -3 / -1
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 395 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 216
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXX 145
LW SAG+CS CRTAP W RAGT GSSFQA PF S CR LDSH
Sbjct: 215 DLWLFSAGQCSFCRTAPLWHRAGTDHGSSFQADPFHSR*CRQLDSHTSP*GSSHIHTSPS 36
Query: 144 XRCRAT*NSPV 112
RC+A *NSP+
Sbjct: 35 GRCKAN*NSPL 3
Score = 120 bits (256), Expect(2) = 1e-031
Identities = 55/77 (71%), Positives = 59/77 (76%)
Frame = +1 / +3
Query: 115 RRILSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGA 294
RRIL G TS RRGC *TTSRRSMGIQ ST R EW SLET*P STCA P+GCGST A
Sbjct: 6 RRILIGFTSSRRGCMDV*TTSRRSMGIQLSTLPRMEWISLET*PVISTCAMPQGCGSTEA 185
Query: 295 TSAS*RRP*TRERTWLA 345
T AS*++P* R +TWLA
Sbjct: 186 TLAS*KKP*IRAQTWLA 236
Score = 41.4 bits (84), Expect(2) = 1e-074
Identities = 16/19 (84%), Positives = 18/19 (94%)
Frame = -3 / -2
Query: 579 AGFEPLGHPKH*AKLNKMV 523
AGFEPLG+PKH AKLNK+V
Sbjct: 469 AGFEPLGNPKHEAKLNKIV 413
Score = 40.5 bits (82), Expect(2) = 2e-091
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +2 / +3
Query: 524 TILFSFA*CLGWPNGSNPA 580
TILFSFA C G PNGSNPA
Sbjct: 414 TILFSFASCFGLPNGSNPA 470
Score = 38.2 bits (77), Expect(2) = 1e-031
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = +1 / +3
Query: 463 GSGTCFRSIEISRAEPEHGRYHFVQLRLVFGM 558
GSGTCFRSIEISRA G FG+
Sbjct: 354 GSGTCFRSIEISRAAEPEGSTILFSFASCFGL 449
Score = 38.2 bits (77), Expect(2) = 2e-070
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -1 / -3
Query: 575 DLNHWAIPNTRRS*TKWY 522
DLNHWAI NTR+S*TK Y
Sbjct: 465 DLNHWAIQNTRQS*TK*Y 412
Score = 36.3 bits (73), Expect(2) = 7e-064
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1 / +2
Query: 523 YHFVQLRLVFGMAQWFKS 576
Y+FVQL LVF +AQWFKS
Sbjct: 413 YYFVQLCLVFWIAQWFKS 466
Score = 29.9 bits (59), Expect(2) = 4e-052
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2 / -1
Query: 574 I*TIGPSQTLGEAEQNGT 521
I*TIG S+T G+AEQN T
Sbjct: 464 I*TIGQSKTRGKAEQNST 411
>gb|BF177065.1|BF177065 EM1_3_B09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 620
Score = 303 bits (655), Expect(2) = 3e-090
Identities = 114/143 (79%), Positives = 130/143 (90%)
Frame = +3 / +3
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
T+SY+KGQKL+Q P+SYSADWQVQY RNGKPIGPQANS WLYI P+GMYGCVNYLK+
Sbjct: 30 TASYIKGQKLLQQKPTSYSADWQVQYALERNGKPIGPQANSNWLYIVPSGMYGCVNYLKQ 209
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
KYGNPT++ITENGMDQPGNLTR+QYL D TRV+FY+ Y+ +LKKAID GANVAGYFAWSL
Sbjct: 210 KYGNPTVFITENGMDQPGNLTREQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSL 389
Query: 363 LDNFEWLAGYSSKFGIVYVDFNT 431
LDNFEW +GY+SKFGIVYVDF+T
Sbjct: 390 LDNFEWQSGYTSKFGIVYVDFST 458
Score = 219 bits (472), Expect(2) = 1e-062
Identities = 105/143 (73%), Positives = 111/143 (77%)
Frame = -2 / -2
Query: 430 VLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYW 251
VLKST*T+PNLD P HSKLSRRDQAK*PAT AP SMAFFS * L*N TLV S +Y
Sbjct: 457 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 278
Query: 250 SRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGPIGLPLRAKTY*T 71
SRVKFPG SIPFSVM VGFPYF R*FT PYIP G M*S EFACGPIGLP R+K Y*T
Sbjct: 277 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFACGPIGLPFRSKAY*T 98
Query: 70 CQSAE*LLGASWTSFCPFM*LDV 2
CQSAE*L+G ++F P M*L V
Sbjct: 97 CQSAE*LVGFC*SNFWPLM*LAV 29
Score = 194 bits (418), Expect(2) = 5e-054
Identities = 90/145 (62%), Positives = 101/145 (69%)
Frame = +2 / +2
Query: 2 HIQLHXXXXXXXXXXQ*LLCRLAGSICFCTQWQTDWTTGEF*VALHRPDGDVRVRELPQG 181
H LH *LL LAGSICF T+WQT+WTTGEF +ALHRP GDV + EL +
Sbjct: 29 HS*LH*GPEIASAEAY*LLS*LAGSICFRTEWQTNWTTGEFKLALHRPIGDVWLCELSEA 208
Query: 182 EVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVS 361
EVW+SN HN ERNG WKLDP V AR H+GA+LQ L R AEE HR RGWLLRLVS
Sbjct: 209 EVWKSNSFHN*ERNGSTWKLDP*AVLARHHKGAILQRLPR*AEESHR*RR*RGWLLRLVS 388
Query: 362 PRQLRVAGRVLVQVRHRLRGLQHAR 436
P QLRVA R+ VQVR+ LR LQHA+
Sbjct: 389 P*QLRVAVRLHVQVRNCLRRLQHAQ 463
Score = 193 bits (416), Expect(2) = 2e-052
Identities = 88/143 (61%), Positives = 108/143 (75%)
Frame = -1 / -1
Query: 431 RVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHPRGVAQVL 252
R EV VD++ELGRV PLEVV+ERP EVASHV +++ G LQL++VA VE HP GV QVL
Sbjct: 458 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 279
Query: 251 VSGQVSRLVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRLWSNRFAIACKNILN 72
++GQVSRL+HSVL Y + WI ILLL++VH +HPR DV+P+ IRLWSN FAI +ILN
Sbjct: 278 LTGQVSRLIHSVLSYENCWISILLLQIVHTTIHPRWDDVKPV*IRLWSNWFAIPF*SILN 99
Query: 71 LPIGRVATGRQLDQLLPLHVAGC 3
LPI VA+ L Q L L+VA C
Sbjct: 98 LPIS*VASRLLLKQFLALNVASC 30
Score = 155 bits (334), Expect(2) = 9e-041
Identities = 72/124 (58%), Positives = 79/124 (63%)
Frame = -3 / -3
Query: 432 AC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAPSWRRAGT 253
AC*S RR+ RTWT L ATRSC+GET+RSSQPR W SSA R S CR AP W RA T
Sbjct: 459 AC*SRRRQFRTWTCNLTATRSCQGETKRSSQPR*RRHRWLSSAQRGSLCRIAPLWCRAST 280
Query: 252 GLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSPVVQSVCHCVQKHIE 73
GSSFQ PFRS L + LD H RC+A+ NSPVVQ VCH V KHIE
Sbjct: 279 AHGSSFQVDPFRSQL*KLLDFHTSASDSSHNHTSPMGRCKASLNSPVVQLVCHSVLKHIE 100
Query: 72 PANR 61
PAN+
Sbjct: 99 PANQ 88
Score = 133 bits (286), Expect(2) = 1e-031
Identities = 66/115 (57%), Positives = 77/115 (66%)
Frame = +1 / +1
Query: 1 THPAT*RGRSWSSWRPVATLPIGRFNMFLHAMANRLDHRRILSGSTSPRRGCTGA*TTSR 180
T AT R R+ S +AT IGRFNM + MAN+LDHRRI +G TS RGC *T
Sbjct: 28 TQLATLRARNCFSRSLLATQLIGRFNML*NGMANQLDHRRIQTGFTSSHRGCMVV*TI*S 207
Query: 181 RSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
RSM IQ+ +* RTEW +LET*P +STC TP+GC ST ATS S*R+P TWLA
Sbjct: 208 RSMEIQQFS*LRTEWINLET*PVSSTCTTPQGCNSTKATSLS*RKPSMTALTWLA 372
Score = 51.0 bits (105), Expect(2) = 3e-090
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3 / +3
Query: 432 LERHPKASAYWFRDMLQKH*DLQSRA* 512
LERHPK SAYWFRDMLQKH* ++A*
Sbjct: 465 LERHPKDSAYWFRDMLQKH*VSNNQA* 545
Score = 42.8 bits (87), Expect(2) = 1e-062
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2 / -2
Query: 517 RAQARLWRSQCF*SMSLNQ*ADAFGWRSSV 428
R QA L +QCF*SMSLNQ*A++ G RSS+
Sbjct: 550 RVQAWLLDTQCF*SMSLNQ*AESLGCRSSL 461
Score = 38.6 bits (78), Expect(2) = 5e-054
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +2
Query: 431 ARTPPEGVGLLVQGHASEALRSPEPSLS 514
ART P+G LLVQ HASE L +PSL+
Sbjct: 464 ARTTPQGFSLLVQRHASETLSV*QPSLN 547
Score = 34.5 bits (69), Expect(2) = 2e-052
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1 / -1
Query: 512 SGSALEISMLLKHVPEPVGRRLRVAFERVEVHVD 411
SG + S+ LKHV EPVG L V+FE VD
Sbjct: 545 SGLVVRHSVFLKHVSEPVG*ILGVSFELGRAEVD 444
Score = 32.7 bits (65), Expect(2) = 9e-041
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -3 / -3
Query: 510 RLGSGDLNASEACP*TSRPTPSGGVRA 430
RLG L+ SEAC *TSR P G VRA
Sbjct: 543 RLGC*TLSVSEACL*TSRLNPWGVVRA 463
Score = 24.4 bits (47), Expect(2) = 1e-031
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 463 GSGTCFRSIEISRAEPE 513
GS TCFR+ E +PE
Sbjct: 496 GSETCFRNTECLTTKPE 546
>gb|BF177056.1|BF177056 EM1_3_A09.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 636
Score = 294 bits (637), Expect(2) = 9e-088
Identities = 111/138 (80%), Positives = 125/138 (90%)
Frame = +3 / +3
Query: 18 KGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNP 197
KGQKL+Q P+SYSADWQVQY RNGKPIGPQANS WLYI P+GMYGCVNYLK+KYGNP
Sbjct: 9 KGQKLLQQKPTSYSADWQVQYALERNGKPIGPQANSNWLYIVPSGMYGCVNYLKQKYGNP 188
Query: 198 TIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFE 377
T++ITENGMDQPGNLTR+QYL D TRV+FY+ Y+ +LKKAID GANVAGYFAWSLLDNFE
Sbjct: 189 TVFITENGMDQPGNLTREQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFE 368
Query: 378 WLAGYSSKFGIVYVDFNT 431
W +GY+SKFGIVYVDF+T
Sbjct: 369 WQSGYTSKFGIVYVDFST 422
Score = 220 bits (475), Expect(2) = 5e-063
Identities = 102/137 (74%), Positives = 108/137 (78%)
Frame = -2 / -3
Query: 430 VLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYW 251
VLKST*T+PNLD P HSKLSRRDQAK*PAT AP SMAFFS * L*N TLV S +Y
Sbjct: 421 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 242
Query: 250 SRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGPIGLPLRAKTY*T 71
SRVKFPG SIPFSVM VGFPYF R*FT PYIP G M*S EFACGPIGLP R+K Y*T
Sbjct: 241 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFACGPIGLPFRSKAY*T 62
Query: 70 CQSAE*LLGASWTSFCP 20
CQSAE*L+G W++F P
Sbjct: 61 CQSAE*LVGFCWSNFWP 11
Score = 193 bits (415), Expect(2) = 1e-053
Identities = 87/129 (67%), Positives = 98/129 (75%)
Frame = +2 / +2
Query: 50 *LLCRLAGSICFCTQWQTDWTTGEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGP 229
*LL LAGSICF T+WQT+WTTGEF +ALHRP GDV + EL + EVW+SN HN ERNG
Sbjct: 41 *LLS*LAGSICFRTEWQTNWTTGEFKLALHRPIGDVWLCELSEAEVWKSNSFHN*ERNGS 220
Query: 230 AWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRH 409
WKLDP V AR H+GA+LQ L R AEE HR RGWLLRLVSP QLRVA R+ VQVR+
Sbjct: 221 TWKLDP*AVLARHHKGAILQRLPR*AEESHR*RR*RGWLLRLVSP*QLRVAVRLHVQVRN 400
Query: 410 RLRGLQHAR 436
LR LQHA+
Sbjct: 401 CLRRLQHAQ 427
Score = 186 bits (401), Expect(2) = 2e-050
Identities = 85/138 (61%), Positives = 105/138 (76%)
Frame = -1 / -2
Query: 431 RVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHPRGVAQVL 252
R EV VD++ELGRV PLEVV+ERP EVASHV +++ G LQL++VA VE HP GV QVL
Sbjct: 422 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 243
Query: 251 VSGQVSRLVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRLWSNRFAIACKNILN 72
++GQVSRL+HSVL Y + WI ILLL++VH +HPR DV+P+ IRLWSN FAI +ILN
Sbjct: 242 LTGQVSRLIHSVLSYENCWISILLLQIVHTTIHPRWDDVKPV*IRLWSNWFAIPF*SILN 63
Query: 71 LPIGRVATGRQLDQLLPL 18
LPI VA+ L+Q L L
Sbjct: 62 LPIS*VASRLLLEQFLAL 9
Score = 155 bits (334), Expect(2) = 9e-041
Identities = 72/124 (58%), Positives = 79/124 (63%)
Frame = -3 / -1
Query: 432 AC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAPSWRRAGT 253
AC*S RR+ RTWT L ATRSC+GET+RSSQPR W SSA R S CR AP W RA T
Sbjct: 423 AC*SRRRQFRTWTCNLTATRSCQGETKRSSQPR*RRHRWLSSAQRGSLCRIAPLWCRAST 244
Query: 252 GLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSPVVQSVCHCVQKHIE 73
GSSFQ PFRS L + LD H RC+A+ NSPVVQ VCH V KHIE
Sbjct: 243 AHGSSFQVDPFRSQL*KLLDFHTSASDSSHNHTSPMGRCKASLNSPVVQLVCHSVLKHIE 64
Query: 72 PANR 61
PAN+
Sbjct: 63 PANQ 52
Score = 133 bits (285), Expect(2) = 1e-031
Identities = 64/109 (58%), Positives = 75/109 (68%)
Frame = +1 / +1
Query: 19 RGRSWSSWRPVATLPIGRFNMFLHAMANRLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQ 198
R R+ SS +AT IGRFNM + MAN+LDHRRI +G TS RGC *T RSM IQ
Sbjct: 10 RARNCSSRSLLATQLIGRFNML*NGMANQLDHRRIQTGFTSSHRGCMVV*TI*SRSMEIQ 189
Query: 199 RST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
+ +* RTEW +LET*P +STC TP+GC ST ATS S*R+P TWLA
Sbjct: 190 QFS*LRTEWINLET*PVSSTCTTPQGCNSTKATSLS*RKPSMTALTWLA 336
Score = 51.0 bits (105), Expect(2) = 9e-088
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3 / +3
Query: 432 LERHPKASAYWFRDMLQKH*DLQSRA* 512
LERHPK SAYWFRDMLQKH* ++A*
Sbjct: 429 LERHPKDSAYWFRDMLQKH*VSNNQA* 509
Score = 42.8 bits (87), Expect(2) = 5e-063
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2 / -3
Query: 517 RAQARLWRSQCF*SMSLNQ*ADAFGWRSSV 428
R QA L +QCF*SMSLNQ*A++ G RSS+
Sbjct: 514 RVQAWLLDTQCF*SMSLNQ*AESLGCRSSL 425
Score = 38.6 bits (78), Expect(2) = 1e-053
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +2
Query: 431 ARTPPEGVGLLVQGHASEALRSPEPSLS 514
ART P+G LLVQ HASE L +PSL+
Sbjct: 428 ARTTPQGFSLLVQRHASETLSV*QPSLN 511
Score = 34.5 bits (69), Expect(2) = 2e-050
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1 / -2
Query: 512 SGSALEISMLLKHVPEPVGRRLRVAFERVEVHVD 411
SG + S+ LKHV EPVG L V+FE VD
Sbjct: 509 SGLVVRHSVFLKHVSEPVG*ILGVSFELGRAEVD 408
Score = 32.7 bits (65), Expect(2) = 9e-041
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -3 / -1
Query: 510 RLGSGDLNASEACP*TSRPTPSGGVRA 430
RLG L+ SEAC *TSR P G VRA
Sbjct: 507 RLGC*TLSVSEACL*TSRLNPWGVVRA 427
Score = 24.4 bits (47), Expect(2) = 1e-031
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +1
Query: 463 GSGTCFRSIEISRAEPE 513
GS TCFR+ E +PE
Sbjct: 460 GSETCFRNTECLTTKPE 510
>gb|BG412795.1|BG412795 OV2_34_H08.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 303 bits (657), Expect = 2e-081
Identities = 119/128 (92%), Positives = 123/128 (96%)
Frame = +3 / +1
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKE 182
TSSYMKGQKL+Q PSSYSADWQVQYVFARNGKPIGP+ANS WLYI PTGMYGCVNYLKE
Sbjct: 109 TSSYMKGQKLLQQTPSSYSADWQVQYVFARNGKPIGPKANSNWLYIVPTGMYGCVNYLKE 288
Query: 183 KYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSL 362
KYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAID GANVAGYFAWSL
Sbjct: 289 KYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDHGANVAGYFAWSL 468
Query: 363 LDNFEWLA 386
LDNFEWL+
Sbjct: 469 LDNFEWLS 492
Score = 268 bits (579), Expect = 9e-071
Identities = 117/127 (92%), Positives = 118/127 (92%)
Frame = -2 / -2
Query: 382 SHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM* 203
SHSKLSRRDQAK*PATFAP SMAFFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM*
Sbjct: 488 SHSKLSRRDQAK*PATFAP*SMAFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM* 309
Query: 202 IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGPIGLPLRAKTY*TCQSAE*LLGASWTSFC 23
VGFPYFSLR*FTHPYIPVG M*S LEFA GPIGLPLRAKTY TCQSAE*LLG W+SFC
Sbjct: 308 TVGFPYFSLR*FTHPYIPVGTM*SQLEFAFGPIGLPLRAKTYWTCQSAE*LLGVCWSSFC 129
Query: 22 PFM*LDV 2
PFM*LDV
Sbjct: 128 PFM*LDV 108
Score = 240 bits (518), Expect = 2e-062
Identities = 98/127 (77%), Positives = 112/127 (88%)
Frame = -1 / -1
Query: 383 QPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYV 204
QPLEVV+ERPGEVASHV +++YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L V
Sbjct: 489 QPLEVVKERPGEVASHVCAMIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNV 310
Query: 203 DRWIPILLLEVVHAPVHPRRGDVEPLRIRLWSNRFAIACKNILNLPIGRVATGRQLDQLL 24
D WIPILLLEVVH +HPRR DV+P+RIRLWSN FAIACKNIL+LPIGRVATGR L+Q L
Sbjct: 309 DSWIPILLLEVVHTSIHPRRDDVKPIRIRLWSNWFAIACKNILDLPIGRVATGRLLEQFL 130
Query: 23 PLHVAGC 3
LHVAGC
Sbjct: 129 SLHVAGC 109
Score = 223 bits (481), Expect = 3e-057
Identities = 93/127 (73%), Positives = 100/127 (78%)
Frame = +2 / +3
Query: 2 HIQLHXXXXXXXXXXQ*LLCRLAGSICFCTQWQTDWTTGEF*VALHRPDGDVRVRELPQG 181
HIQLH Q*LLCRLAG ICFCTQWQT+WT GEF*+ALHRPDGDV + ELPQG
Sbjct: 108 HIQLHEGTETAPADAQ*LLCRLAGPICFCTQWQTNWTKGEF*LALHRPDGDVWMCELPQG 287
Query: 182 EVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVS 361
EVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH PAE+ HR +RGWLLRLVS
Sbjct: 288 EVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHWPAEKSHRSWRKRGWLLRLVS 467
Query: 362 PRQLRVA 382
P QLRVA
Sbjct: 468 P*QLRVA 488
Score = 189 bits (407), Expect = 5e-047
Identities = 86/115 (74%), Positives = 92/115 (80%)
Frame = +1 / +2
Query: 1 THPAT*RGRSWSSWRPVATLPIGRFNMFLHAMANRLDHRRILSGSTSPRRGCTGA*TTSR 180
THPAT*R R+ SS RPVATLPIGR NMFLHAMAN+LD RRIL G TS RRGC *TTSR
Sbjct: 107 THPAT*RDRNCSSRRPVATLPIGRSNMFLHAMANQLDQRRILIGFTSSRRGCMDV*TTSR 286
Query: 181 RSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
RSMGIQ ST R EW SLET*P TSTCA P+GCGST AT AS*++P* +TWLA
Sbjct: 287 RSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLAS*KKP*IMAQTWLA 451
Score = 171 bits (368), Expect = 1e-041
Identities = 75/127 (59%), Positives = 79/127 (62%)
Frame = -3 / -3
Query: 381 ATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCR 202
ATRSC+GETRRSSQPR LW SAG+CS CRTAP W RAGTG GSSFQA PF S CR
Sbjct: 487 ATRSCQGETRRSSQPRLRHDLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CR 308
Query: 201 SLDSHXXXXXXXXXXXXXXXRCRAT*NSPVVQSVCHCVQKHIEPANRQXXXXXXXXXXXX 22
LDSH RC+A *NSP+VQ VCHCVQKHI PANRQ
Sbjct: 307 QLDSHTSP*GSSHIHTSPSGRCKAN*NSPLVQLVCHCVQKHIGPANRQSSYWASAGAVSV 128
Query: 21 XXXSWMC 1
SWMC
Sbjct: 127 PSCSWMC 107
>gb|CW241422.1|CW241422 104_700_11218762_148_37541_037 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11218762, DNA
sequence
Length = 644
Score = 230 bits (496), Expect(2) = 2e-080
Identities = 92/93 (98%), Positives = 93/93 (100%)
Frame = +3 / -2
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSS 398
GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSS
Sbjct: 325 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSS 146
Query: 399 KFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL 497
KFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL
Sbjct: 145 KFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL 47
Score = 196 bits (422), Expect(2) = 4e-066
Identities = 88/93 (94%), Positives = 88/93 (94%)
Frame = -2 / +3
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 48 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 227
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIP 218
AFFSWPM*LL*NRTLVASRRYWSRVKFPG SIP
Sbjct: 228 AFFSWPM*LL*NRTLVASRRYWSRVKFPG*SIP 326
Score = 182 bits (391), Expect(2) = 8e-059
Identities = 79/104 (75%), Positives = 89/104 (85%)
Frame = -1 / +2
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 14 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 193
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHS 219
EVASHV +L+YG QLA+VA VEPHP G+AQVLV+GQVSRL+HS
Sbjct: 194 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLVTGQVSRLIHS 325
Score = 175 bits (376), Expect(2) = 3e-045
Identities = 74/95 (77%), Positives = 77/95 (81%)
Frame = -3 / +1
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 40 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 219
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPF 220
LW SAG+CS CRTAP W RAGTG GSSFQA PF
Sbjct: 220 DLWLFSAGQCSFCRTAPLWHRAGTGHGSSFQADPF 324
Score = 172 bits (371), Expect(2) = 2e-055
Identities = 75/96 (78%), Positives = 82/96 (85%)
Frame = +2 / -1
Query: 218 RNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLV 397
RNG AWKLDP PVPAR H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LV
Sbjct: 326 RNGSAWKLDP*PVPARCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILV 147
Query: 398 QVRHRLRGLQHARTPPEGVGLLVQGHASEALRSPEP 505
QV HRLR LQ+ART P+GVGLLVQGHASEALRS P
Sbjct: 146 QVWHRLR*LQYARTAPQGVGLLVQGHASEALRSLGP 39
Score = 90.9 bits (192), Expect(2) = 2e-080
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3 / -2
Query: 117 ANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQ 230
ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENG Q
Sbjct: 523 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGTQQ 410
Score = 77.1 bits (162), Expect(2) = 4e-066
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / +3
Query: 223 IPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFA 116
+PFSVM* VGFPYFSLR*FTHPYIPVG M*S LEFA
Sbjct: 417 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 524
Score = 74.8 bits (157), Expect(3) = 2e-028
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1 / -3
Query: 220 EWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
EW SLET*P TSTCA P+GCGST AT AS*++P* R +TWLA
Sbjct: 324 EWISLET*PVTSTCAMPQGCGSTEATLAS*KKP*IRAQTWLA 199
Score = 67.0 bits (140), Expect(2) = 8e-059
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -1 / +2
Query: 230 LVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRL 114
L+ ++L VD WIPILLLEVVH +HPRR DV+P+RIRL
Sbjct: 410 LLSTILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 526
Score = 65.2 bits (136), Expect(2) = 2e-055
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2 / -1
Query: 116 GEF*VALHRPDGDVRVRELPQGEVWESNDLHNGE 217
GEF*+ALHRPDGDV + ELPQGEVWESN LH E
Sbjct: 524 GEF*LALHRPDGDVWMCELPQGEVWESNCLHYRE 423
Score = 53.3 bits (110), Expect(3) = 2e-028
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +1 / -3
Query: 94 MANRLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQRST 207
+ N RRIL G TS RRGC *TTSRRSMGIQ ST
Sbjct: 546 LTNAWTXRRILIGFTSSRRGCMDV*TTSRRSMGIQLST 433
Score = 36.8 bits (74), Expect(3) = 2e-028
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +1 / -3
Query: 463 GSGTCFRSIEISRAEPEHG 519
GSGTCFRSIEISRA G
Sbjct: 81 GSGTCFRSIEISRATEPEG 25
Score = 28.6 bits (56), Expect(2) = 3e-045
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3 / +1
Query: 222 FRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSP 115
+ S CR LDSH RC+A *NSP
Sbjct: 418 YHSR*CRQLDSHTSP*GSSHIHTSPSGRCKAN*NSP 525
>gb|CD431007.1|CD431007 ETH1_6_B01.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_6_B01_A002 3', mRNA sequence
Length = 609
Score = 269 bits (582), Expect(2) = 3e-080
Identities = 100/123 (81%), Positives = 112/123 (91%)
Frame = +3 / +2
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNL 242
DWQVQY RNGKPIGPQANS WLYI P+GMYGCVNYLK+KYGNPT++ITENGMDQPGNL
Sbjct: 2 DWQVQYALERNGKPIGPQANSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENGMDQPGNL 181
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
TR+QYL D TRV+FY+ Y+ +LKKAID GANVAGYFAWSLLDNFEW +GY+SKFGIVYVD
Sbjct: 182 TREQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTSKFGIVYVD 361
Query: 423 FNT 431
F+T
Sbjct: 362 FST 370
Score = 201 bits (433), Expect(2) = 3e-057
Identities = 94/123 (76%), Positives = 97/123 (78%)
Frame = -2 / -1
Query: 430 VLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYW 251
VLKST*T+PNLD P HSKLSRRDQAK*PAT AP SMAFFS * L*N TLV S +Y
Sbjct: 369 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 190
Query: 250 SRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGPIGLPLRAKTY*T 71
SRVKFPG SIPFSVM VGFPYF R*FT PYIP G M*S EFACGPIGLP R+K Y*T
Sbjct: 189 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFACGPIGLPFRSKAY*T 10
Query: 70 CQS 62
CQS
Sbjct: 9 CQS 1
Score = 181 bits (389), Expect(2) = 5e-050
Identities = 82/124 (66%), Positives = 93/124 (75%)
Frame = +2 / +1
Query: 65 LAGSICFCTQWQTDWTTGEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLD 244
LAGSICF T+WQT+WTTGEF +ALH P GDV + EL + EVW+SN HN ERNG KLD
Sbjct: 4 LAGSICFRTEWQTNWTTGEFKLALHCPIGDVWLCELSEAEVWKSNSFHN*ERNGSTRKLD 183
Query: 245 PRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGL 424
P V AR H+GA+LQ L R AEE HR RGWLLRLVSP QLRVA R+ VQVR+ LR L
Sbjct: 184 P*AVLARHHKGAILQRLPR*AEESHR*RR*RGWLLRLVSP*QLRVAVRLHVQVRNCLRRL 363
Query: 425 QHAR 436
QHA+
Sbjct: 364 QHAQ 375
Score = 173 bits (372), Expect(2) = 2e-046
Identities = 77/123 (62%), Positives = 96/123 (78%)
Frame = -1 / -3
Query: 431 RVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHPRGVAQVL 252
R EV VD++ELGRV PLEVV+ERP EVASHV +++ G LQL++VA VE HP GV QVL
Sbjct: 370 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 191
Query: 251 VSGQVSRLVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRLWSNRFAIACKNILN 72
++GQVS L+HSVL Y + WI ILLL++VH +HPR +V+P+ IRLWSN FAI +ILN
Sbjct: 190 LTGQVSGLIHSVLSYENCWISILLLQIVHTTIHPRWDNVKPV*IRLWSNWFAIPF*SILN 11
Query: 71 LPI 63
LPI
Sbjct: 10 LPI 2
Score = 153 bits (329), Expect(2) = 5e-040
Identities = 70/123 (56%), Positives = 78/123 (63%)
Frame = -3 / -2
Query: 432 AC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAPSWRRAGT 253
AC*S RR+ RTWT L ATRSC+GET+RSSQPR W SSA R S CR AP W RA T
Sbjct: 371 AC*SRRRQFRTWTCNLTATRSCQGETKRSSQPR*RRHRWLSSAQRGSLCRIAPLWCRAST 192
Query: 252 GLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSPVVQSVCHCVQKHIE 73
GSSF+ PFRS L + LD H +C+A+ NSPVVQ VCH V KHIE
Sbjct: 191 AHGSSFRVDPFRSQL*KLLDFHTSASDSSHNHTSPMGQCKASLNSPVVQLVCHSVLKHIE 12
Query: 72 PAN 64
PAN
Sbjct: 11 PAN 3
Score = 120 bits (257), Expect(2) = 9e-028
Identities = 56/94 (59%), Positives = 65/94 (69%)
Frame = +1 / +3
Query: 64 IGRFNMFLHAMANRLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQRST*RRTEWTSLET* 243
IGRFNM + MAN+LDHRRI +G T RGC *T RSM IQ+ +* RTEW + ET*
Sbjct: 3 IGRFNML*NGMANQLDHRRIQTGFTLSHRGCMVV*TI*SRSMEIQQFS*LRTEWINPET* 182
Query: 244 PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
P +STC TP+GC ST ATS S*R+P TWLA
Sbjct: 183 PVSSTCTTPQGCNSTKATSLS*RKPSMTALTWLA 284
Score = 51.0 bits (105), Expect(2) = 3e-080
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 432 LERHPKASAYWFRDMLQKH*DLQSRA* 512
LERHPK SAYWFRDMLQKH* ++A*
Sbjct: 377 LERHPKDSAYWFRDMLQKH*VSNNQA* 457
Score = 42.8 bits (87), Expect(2) = 3e-057
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2 / -1
Query: 517 RAQARLWRSQCF*SMSLNQ*ADAFGWRSSV 428
R QA L +QCF*SMSLNQ*A++ G RSS+
Sbjct: 462 RVQAWLLDTQCF*SMSLNQ*AESLGCRSSL 373
Score = 38.6 bits (78), Expect(2) = 5e-050
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 431 ARTPPEGVGLLVQGHASEALRSPEPSLS 514
ART P+G LLVQ HASE L +PSL+
Sbjct: 376 ARTTPQGFSLLVQRHASETLSV*QPSLN 459
Score = 34.5 bits (69), Expect(2) = 2e-046
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1 / -3
Query: 512 SGSALEISMLLKHVPEPVGRRLRVAFERVEVHVD 411
SG + S+ LKHV EPVG L V+FE VD
Sbjct: 457 SGLVVRHSVFLKHVSEPVG*ILGVSFELGRAEVD 356
Score = 32.7 bits (65), Expect(2) = 5e-040
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -3 / -2
Query: 510 RLGSGDLNASEACP*TSRPTPSGGVRA 430
RLG L+ SEAC *TSR P G VRA
Sbjct: 455 RLGC*TLSVSEACL*TSRLNPWGVVRA 375
Score = 24.4 bits (47), Expect(2) = 9e-028
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +1 / +3
Query: 463 GSGTCFRSIEISRAEPE 513
GS TCFR+ E +PE
Sbjct: 408 GSETCFRNTECLTTKPE 458
>gb|BG559003.1|BG559003 RHIZ2_53_D04.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 427
Score = 246 bits (532), Expect(2) = 3e-076
Identities = 99/103 (96%), Positives = 101/103 (98%)
Frame = +3 / +3
Query: 198 TIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFE 377
T+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFE
Sbjct: 3 TVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFE 182
Query: 378 WLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQSR 506
WL+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL R
Sbjct: 183 WLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL*GR 311
Score = 199 bits (430), Expect(2) = 2e-062
Identities = 93/100 (93%), Positives = 93/100 (93%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 301 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 122
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IV 197
AFFSWPM*LL*NRTLVASRRY SRVKFPG SIPFSVM* V
Sbjct: 121 AFFSWPM*LL*NRTLVASRRY*SRVKFPG*SIPFSVM*TV 2
Score = 182 bits (393), Expect(2) = 8e-055
Identities = 78/110 (70%), Positives = 93/110 (84%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP +AL+ISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 335 KIVLPSGSAALKISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 156
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVD 201
EVASHV +L+YG QLA+VA VEPHP G+ QVL++GQVSRL+HS+L V+
Sbjct: 155 EVASHVCALIYGFFQLANVASVEPHPCGITQVLITGQVSRLIHSILGNVN 6
Score = 175 bits (377), Expect(2) = 1e-050
Identities = 75/103 (72%), Positives = 79/103 (76%)
Frame = -3 / -2
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 309 GPKDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 130
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSL 196
LW SAG+CS CRTAP W AGT GSSFQA PF S C+ L
Sbjct: 129 DLWLFSAGQCSFCRTAPLWHHAGTDHGSSFQADPFHSR*CKQL 1
Score = 168 bits (362), Expect(2) = 1e-049
Identities = 76/103 (73%), Positives = 83/103 (80%)
Frame = +2 / +2
Query: 197 NDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLR 376
N LH E NG AWKLDP VPA H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLR
Sbjct: 2 NCLHYREWNGSAWKLDP*SVPA*CHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLR 181
Query: 377 VAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHASEALRSPEP 505
VA R+LVQV HRLR LQ+ART P+GVGLLVQGHASEALRS P
Sbjct: 182 VAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHASEALRSLGP 310
Score = 61.1 bits (127), Expect(2) = 2e-062
Identities = 24/31 (77%), Positives = 29/31 (93%)
Frame = -3 / -3
Query: 615 LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
LSF+PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 419 LSFIPILLAKHKAGFEPLGNPKHEAKLNKIV 327
Score = 60.6 bits (126), Expect(2) = 3e-076
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +2 / +1
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSY 619
TILFSFA C G PNGSNPA CLA+KMG K+S+
Sbjct: 328 TILFSFASCFGLPNGSNPALCLASKMGIKESH 423
Score = 52.8 bits (109), Expect(2) = 8e-055
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -1 / -1
Query: 623 RGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
R LFPF *P T DLNHWAI NTR+S*TK Y
Sbjct: 427 RNGSLLFPFC*PSTRLDLNHWAIQNTRQS*TK*Y 326
Score = 49.6 bits (102), Expect(2) = 1e-049
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1 / +3
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNK 609
Y+FVQL LVF +AQWFKS V G QNGNK
Sbjct: 327 YYFVQLCLVFWIAQWFKSSLVLG*QNGNK 413
Score = 46.4 bits (95), Expect(2) = 1e-050
Identities = 21/34 (61%), Positives = 25/34 (73%)
Frame = -2 / -2
Query: 622 GVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
G+A+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 426 GMALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 325
>gb|BZ367053.1|BZ367053 id02b04.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone id02b04 5', DNA sequence
Length = 619
Score = 213 bits (460), Expect(2) = 2e-075
Identities = 84/88 (95%), Positives = 87/88 (98%)
Frame = +3 / -3
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSS 398
GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSS
Sbjct: 278 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSS 99
Query: 399 KFGIVYVDFNTLERHPKASAYWFRDMLQ 482
KFGIVYVDFNTLERHPKASAYWFRD+ +
Sbjct: 98 KFGIVYVDFNTLERHPKASAYWFRDIFR 15
Score = 180 bits (388), Expect(2) = 2e-061
Identities = 81/86 (94%), Positives = 81/86 (94%)
Frame = -2 / +1
Query: 475 MSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM 296
MSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SMAFFSWPM
Sbjct: 22 MSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM 201
Query: 295 *LL*NRTLVASRRYWSRVKFPGWSIP 218
*LL*NRTLVASRRYWSRVKFPG SIP
Sbjct: 202 *LL*NRTLVASRRYWSRVKFPG*SIP 279
Score = 158 bits (340), Expect(2) = 8e-052
Identities = 66/85 (77%), Positives = 69/85 (81%)
Frame = -3 / +2
Query: 474 CP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRC 295
CP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P LW SAG+C
Sbjct: 23 CP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRPDLWLFSAGQC 202
Query: 294 SSCRTAPSWRRAGTGLGSSFQAGPF 220
S CRTAP W RAGTG GSSFQA PF
Sbjct: 203 SFCRTAPLWHRAGTGHGSSFQADPF 277
Score = 158 bits (339), Expect(2) = 4e-051
Identities = 67/86 (77%), Positives = 74/86 (86%)
Frame = +2 / -2
Query: 218 RNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLV 397
RNG AWKLDP PVPAR H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LV
Sbjct: 279 RNGSAWKLDP*PVPARCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILV 100
Query: 398 QVRHRLRGLQHARTPPEGVGLLVQGH 475
QV HRLR LQ+ART P+GVGLLVQGH
Sbjct: 99 QVWHRLR*LQYARTAPQGVGLLVQGH 22
Score = 156 bits (335), Expect(2) = 1e-039
Identities = 66/85 (77%), Positives = 76/85 (89%)
Frame = -1 / +3
Query: 473 VPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADV 294
VPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPGEVASHV +L+YG QLA+V
Sbjct: 24 VPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANV 203
Query: 293 APVEPHPRGVAQVLVSGQVSRLVHS 219
A VEPHP G+AQVLV+GQVSRL+HS
Sbjct: 204 ASVEPHPCGIAQVLVTGQVSRLIHS 278
Score = 90.9 bits (192), Expect(2) = 2e-075
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3 / -3
Query: 117 ANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQ 230
ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENG Q
Sbjct: 476 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGTQQ 363
Score = 77.1 bits (162), Expect(2) = 2e-061
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / +1
Query: 223 IPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFA 116
+PFSVM* VGFPYFSLR*FTHPYIPVG M*S LEFA
Sbjct: 370 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 477
Score = 74.8 bits (157), Expect(2) = 2e-022
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1 / -1
Query: 220 EWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
EW SLET*P TSTCA P+GCGST AT AS*++P* R +TWLA
Sbjct: 277 EWISLET*PVTSTCAMPQGCGSTEATLAS*KKP*IRAQTWLA 152
Score = 67.0 bits (140), Expect(2) = 8e-052
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -1 / +3
Query: 230 LVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRL 114
L+ ++L VD WIPILLLEVVH +HPRR DV+P+RIRL
Sbjct: 363 LLSTILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 479
Score = 65.2 bits (136), Expect(2) = 4e-051
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2 / -2
Query: 116 GEF*VALHRPDGDVRVRELPQGEVWESNDLHNGE 217
GEF*+ALHRPDGDV + ELPQGEVWESN LH E
Sbjct: 477 GEF*LALHRPDGDVWMCELPQGEVWESNCLHYRE 376
Score = 52.4 bits (108), Expect(2) = 2e-022
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +1 / -1
Query: 94 MANRLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQRST 207
+ N RRIL G TS RRGC *TTSRRSMGIQ ST
Sbjct: 499 LTNAWTCRRILIGFTSSRRGCMDV*TTSRRSMGIQLST 386
Score = 28.6 bits (56), Expect(2) = 1e-039
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3 / +2
Query: 222 FRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSP 115
+ S CR LDSH RC+A *NSP
Sbjct: 371 YHSR*CRQLDSHTSP*GSSHIHTSPSGRCKAN*NSP 478
>gb|BF481302.1|BF481302 FM1_18_C08.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 442
Score = 235 bits (508), Expect(2) = 7e-075
Identities = 95/98 (96%), Positives = 96/98 (97%)
Frame = +3 / +3
Query: 213 ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGY 392
ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GY
Sbjct: 3 ENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGY 182
Query: 393 SSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQSR 506
SSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL R
Sbjct: 183 SSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL*GR 296
Score = 193 bits (417), Expect(2) = 2e-062
Identities = 89/95 (93%), Positives = 89/95 (93%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 286 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 107
Query: 316 AFFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFS 212
AFFSWPM*LL*NRTLVASRRY SRVKFPG SIPFS
Sbjct: 106 AFFSWPM*LL*NRTLVASRRY*SRVKFPG*SIPFS 2
Score = 186 bits (400), Expect(2) = 7e-058
Identities = 79/106 (74%), Positives = 92/106 (86%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP +ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 320 KIVLPSGSAALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 141
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVL 213
EVASHV +L+YG QLA+VA VEPHP G+AQVL++GQVSRL+HS+L
Sbjct: 140 EVASHVCALIYGFFQLANVASVEPHPCGIAQVLITGQVSRLIHSIL 3
Score = 173 bits (373), Expect(2) = 2e-052
Identities = 74/97 (76%), Positives = 77/97 (79%)
Frame = -3 / -2
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 294 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 115
Query: 324 GLWPSSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRS 214
LW SAG+CS CRTAP W RAGT GSSFQA PF S
Sbjct: 114 DLWLFSAGQCSFCRTAPLWHRAGTDHGSSFQADPFHS 4
Score = 167 bits (360), Expect(2) = 1e-052
Identities = 74/97 (76%), Positives = 81/97 (83%)
Frame = +2 / +2
Query: 215 ERNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVL 394
E NG AWKLDP VPAR H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+L
Sbjct: 5 EWNGSAWKLDP*SVPARCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRIL 184
Query: 395 VQVRHRLRGLQHARTPPEGVGLLVQGHASEALRSPEP 505
VQV HRLR LQ+ART P+GVGLLVQGHASEALRS P
Sbjct: 185 VQVWHRLR*LQYARTAPQGVGLLVQGHASEALRSLGP 295
Score = 73.9 bits (155), Expect(2) = 2e-022
Identities = 31/44 (70%), Positives = 35/44 (79%)
Frame = +1 / +1
Query: 214 RTEWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
R EW SLET*P STCA P+GCGST AT AS*++P* R +TWLA
Sbjct: 4 RMEWISLET*PVISTCAMPQGCGSTEATLAS*KKP*IRAQTWLA 135
Score = 67.0 bits (140), Expect(2) = 7e-075
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2 / +1
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ DQL
Sbjct: 313 TILFSFASCFGLPNGSNPALCLASKMGIKESHSDQL 420
Score = 67.0 bits (140), Expect(2) = 2e-062
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = -3 / -3
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN*S LSF+PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 422 HN*SEWLSFIPILLAKHKAGFEPLGNPKHEAKLNKIV 312
Score = 60.6 bits (126), Expect(2) = 1e-052
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATPINC
Sbjct: 311 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPINC 421
Score = 59.7 bits (124), Expect(2) = 7e-058
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = -1 / -1
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TIDR LFPF *P T DLNHWAI NTR+S*TK Y
Sbjct: 421 TIDRSGSLLFPFC*PSTRLDLNHWAIQNTRQS*TK*Y 311
Score = 54.7 bits (113), Expect(2) = 2e-022
Identities = 25/37 (67%), Positives = 28/37 (75%)
Frame = +1 / +3
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNGNK + RSIV
Sbjct: 312 YYFVQLCLVFWIAQWFKSSLVLG*QNGNKREPLRSIV 422
Score = 54.2 bits (112), Expect(2) = 2e-052
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+QLIGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 423 AQLIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 310
>gb|BI097917.1|BI097917 IP1_29_F08.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 510
Score = 192 bits (414), Expect(3) = 2e-073
Identities = 77/78 (98%), Positives = 78/78 (100%)
Frame = +3 / +3
Query: 264 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERH 443
DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSSKFGIVYVDFNTLERH
Sbjct: 3 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSSKFGIVYVDFNTLERH 182
Query: 444 PKASAYWFRDMLQKH*DL 497
PKASAYWFRDMLQKH*DL
Sbjct: 183 PKASAYWFRDMLQKH*DL 236
Score = 161 bits (346), Expect(3) = 5e-065
Identities = 74/78 (94%), Positives = 74/78 (94%)
Frame = -2 / -3
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSM 317
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SM
Sbjct: 235 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SM 56
Query: 316 AFFSWPM*LL*NRTLVAS 263
AFFSWPM*LL*NRTLVAS
Sbjct: 55 AFFSWPM*LL*NRTLVAS 2
Score = 152 bits (326), Expect(3) = 2e-055
Identities = 66/89 (74%), Positives = 74/89 (83%)
Frame = -1 / -2
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPG 351
K LP ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEVV+ERPG
Sbjct: 269 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEVVKERPG 90
Query: 350 EVASHVRSLVYGLLQLADVAPVEPHPRGV 264
EVASHV +L+YG QLA+VA VEPHP G+
Sbjct: 89 EVASHVCALIYGFFQLANVASVEPHPCGI 3
Score = 148 bits (317), Expect(3) = 8e-049
Identities = 62/81 (76%), Positives = 65/81 (80%)
Frame = -3 / -1
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLP 325
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRSC+GETRRSSQPR P
Sbjct: 243 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRSCQGETRRSSQPRLRP 64
Query: 324 GLWPSSAGRCSSCRTAPSWRR 262
LW SAG+CS CRTAP W R
Sbjct: 63 DLWLFSAGQCSFCRTAPLWHR 1
Score = 140 bits (300), Expect(3) = 1e-053
Identities = 62/81 (76%), Positives = 69/81 (85%)
Frame = +2 / +2
Query: 263 RRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHARTP 442
R H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LVQV HRLR LQ+ART
Sbjct: 2 RCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILVQVWHRLR*LQYARTA 181
Query: 443 PEGVGLLVQGHASEALRSPEP 505
P+GVGLLVQGHASEALRS P
Sbjct: 182 PQGVGLLVQGHASEALRSLGP 244
Score = 66.1 bits (138), Expect(3) = 2e-073
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +1
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 262 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 369
Score = 63.8 bits (133), Expect(3) = 5e-065
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1 / -1
Query: 719 LSISNTINQHDKITTAQTPERTYPQTHNI 633
LSISN INQHDKITT+QTP+RTY QTHNI
Sbjct: 477 LSISNKINQHDKITTSQTPQRTYSQTHNI 391
Score = 63.4 bits (132), Expect(3) = 5e-065
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -3 / -2
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 371 HNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 261
Score = 59.3 bits (123), Expect(3) = 1e-053
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +2
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 260 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 370
Score = 57.9 bits (120), Expect(3) = 2e-073
Identities = 21/31 (67%), Positives = 26/31 (83%)
Frame = +2 / +3
Query: 635 CCVFVGMFSLEFELWLFYRVG*SCLKCLIQD 727
CC FV MFS+ FE+WLFYRV *S LKCL+++
Sbjct: 393 CCEFVSMFSVAFEMWLFYRVD*SYLKCLVRN 485
Score = 53.8 bits (111), Expect(3) = 2e-055
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1 / -3
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 370 TIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 260
Score = 52.4 bits (108), Expect(3) = 8e-049
Identities = 24/38 (63%), Positives = 28/38 (73%)
Frame = -2 / -1
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+Q IGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 372 AQFIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 259
Score = 51.0 bits (105), Expect(3) = 1e-053
Identities = 22/32 (68%), Positives = 25/32 (78%)
Frame = +3 / +1
Query: 633 DVVCLWVCSLWSLSCGYFIVLVDRV*NA*FRT 728
+VV L VCSLW L CGYFIVL+D +*NA* T
Sbjct: 391 NVVSL*VCSLWRLRCGYFIVLIDLI*NA*SGT 486
Score = 50.1 bits (103), Expect(3) = 2e-055
Identities = 23/31 (74%), Positives = 24/31 (77%)
Frame = -2 / -2
Query: 727 VLN*AFQTRSTNTIK*PQLKLQREHTHKHTT 635
V +*AFQ RS NTIK*P LK REHTHK TT
Sbjct: 485 VPD*AFQIRSINTIK*PHLKRHREHTHKLTT 393
Score = 48.7 bits (100), Expect(3) = 9e-021
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1 / +3
Query: 523 YHFVQLRLVFGMAQWFKSGSVPGYQNGNKGQLPRSIV 633
Y+FVQL LVF +AQWFKS V G QNG+K + R IV
Sbjct: 261 YYFVQLCLVFWIAQWFKSSLVLG*QNGSKREPLR*IV 371
Score = 46.4 bits (95), Expect(3) = 9e-021
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +1 / +1
Query: 262 ATPRGCGSTGATSAS*RRP*TRERTWLA 345
A P+GCGST AT AS*++P* R +TWLA
Sbjct: 1 AMPQGCGSTEATLAS*KKP*IRAQTWLA 84
Score = 46.0 bits (94), Expect(3) = 9e-021
Identities = 22/29 (75%), Positives = 24/29 (82%)
Frame = +1 / +2
Query: 634 MLCVCGYVLSGV*AVVILSCWLIVFEMLN 720
ML VC YVL GV* VVILSC LI+FEML+
Sbjct: 392 ML*VCEYVLCGV*DVVILSC*LILFEMLS 478
Score = 33.6 bits (67), Expect(3) = 8e-049
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3 / -3
Query: 717 KHFKHDQPTRXXXXXXXSRENIPTNTQH 634
KHFK DQ TR + ENI TN+QH
Sbjct: 475 KHFK*DQSTR*NNHISNATENILTNSQH 392
>gb|BG412485.1|BG412485 OV2_34_H08.g1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 345
Score = 275 bits (595), Expect = 6e-073
Identities = 109/114 (95%), Positives = 112/114 (98%)
Frame = +3 / +2
Query: 156 YGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGAN 335
YGCVNYLKEKYGNPT+YITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGAN
Sbjct: 2 YGCVNYLKEKYGNPTVYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGAN 181
Query: 336 VAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL 497
VAGYF WSLLDNFE L+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*D+
Sbjct: 182 VAGYFVWSLLDNFECLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DV 343
Score = 234 bits (505), Expect = 2e-060
Identities = 104/113 (92%), Positives = 104/113 (92%)
Frame = -2 / -1
Query: 493 SQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMA 314
SQCF*SMSLNQ ADA G RSSVLKST*TMPNLDEYP HSKLSRRDQ K*PATFAP SMA
Sbjct: 339 SQCF*SMSLNQYADALGCRSSVLKST*TMPNLDEYPDRHSKLSRRDQTK*PATFAP*SMA 160
Query: 313 FFSWPM*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPY 155
FFSWPM*LL*NRTLVASRRYWSRVKFPG SIPFSVM* VGFPYFSLR*FTHPY
Sbjct: 159 FFSWPM*LL*NRTLVASRRYWSRVKFPG*SIPFSVM*TVGFPYFSLR*FTHPY 1
Score = 193 bits (415), Expect = 4e-048
Identities = 83/109 (76%), Positives = 91/109 (83%)
Frame = +2 / +1
Query: 167 ELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWL 346
ELPQGEVWESN LH E NG AWKLDP PVPAR H+GAVLQ+LH PAE+ HR G +RGWL
Sbjct: 13 ELPQGEVWESNCLHYREWNGSAWKLDP*PVPARCHKGAVLQKLHWPAEKSHRSGRKRGWL 192
Query: 347 LRLVSPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHASEALR 493
LRLVSP QLRV R+LVQV H LR LQ+ART P+GVG+LVQGHASEALR
Sbjct: 193 LRLVSP*QLRVPVRILVQVWHSLR*LQYARTAPQGVGVLVQGHASEALR 339
Score = 191 bits (412), Expect = 1e-047
Identities = 83/114 (72%), Positives = 96/114 (84%)
Frame = -1 / -3
Query: 497 EISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVY 318
+ISMLLKHVPEPV RRL V FER+EV+VD A+LGRV Q LEVV+ERP EVASHV +L+Y
Sbjct: 343 DISMLLKHVPEPVRRRLGVPFERIEVNVDYAKLGRVS*QALEVVKERPDEVASHVCALIY 164
Query: 317 GLLQLADVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPILLLEVVHAPV 156
G QLA+VA VEPHP G+AQVLV+GQVSRL+HS+L VD WIPILLLEVVH +
Sbjct: 163 GFFQLANVASVEPHPCGIAQVLVTGQVSRLIHSILGNVDSWIPILLLEVVHTSI 2
Score = 178 bits (384), Expect = 7e-044
Identities = 76/102 (74%), Positives = 79/102 (77%)
Frame = -3 / -2
Query: 492 LNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWP 313
LNASEACP*TS PTP G VRA *S RR C+TWTS L TRSC+GETRRSSQPR P LW
Sbjct: 338 LNASEACP*TSTPTPWGAVRAY*SQRRLCQTWTSILTGTRSCQGETRRSSQPRLRPDLWL 159
Query: 312 SSAGRCSSCRTAPSWRRAGTGLGSSFQAGPFRSPLCRSLDSH 187
SAG+CS CRTAP W RAGTG GSSFQA PF S CR LDSH
Sbjct: 158 FSAGQCSFCRTAPLWHRAGTGHGSSFQADPFHSR*CRQLDSH 33
Score = 99.6 bits (211), Expect(2) = 4e-023
Identities = 45/60 (75%), Positives = 49/60 (81%)
Frame = +1 / +3
Query: 166 *TTSRRSMGIQRST*RRTEWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
*TTSRRSMGIQ ST R EW SLET*P TSTCA P+GCGST AT AS*++P* R +TWLA
Sbjct: 12 *TTSRRSMGIQLSTLPRMEWISLET*PVTSTCAMPQGCGSTEATLAS*KKP*IRAQTWLA 191
Score = 29.9 bits (59), Expect(2) = 4e-023
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 463 GSGTCFRSIEIS 498
GSGTCFRSIE+S
Sbjct: 309 GSGTCFRSIEMS 344
>gb|CW092082.1|CW092082 104_454_10998932_116_33041_074 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10998932, DNA
sequence
Length = 670
Score = 190 bits (410), Expect(3) = 1e-072
Identities = 76/78 (97%), Positives = 78/78 (100%)
Frame = +3 / +1
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSS 398
GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWL+GYSS
Sbjct: 436 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLSGYSS 615
Query: 399 KFGIVYVDFNTLERHPKA 452
KFGIVYVDF+TLERHPKA
Sbjct: 616 KFGIVYVDFHTLERHPKA 669
Score = 160 bits (345), Expect(3) = 3e-057
Identities = 72/78 (92%), Positives = 72/78 (92%)
Frame = -2 / -3
Query: 451 AFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTL 272
A G RSSV KST*TMPNLDEYP SHSKLSRRDQAK*PATFAP SMAFFSWPM*LL*NRTL
Sbjct: 668 ALGCRSSV*KST*TMPNLDEYPDSHSKLSRRDQAK*PATFAP*SMAFFSWPM*LL*NRTL 489
Query: 271 VASRRYWSRVKFPGWSIP 218
VASRRYWSRVKFPG SIP
Sbjct: 488 VASRRYWSRVKFPG*SIP 435
Score = 138 bits (297), Expect(3) = 2e-047
Identities = 58/78 (74%), Positives = 61/78 (78%)
Frame = -3 / -1
Query: 453 TPSGGVRAC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAP 274
TP G VRA S RRRC+TWTS L ATRSC+GETRRSSQPR P LW SAG+CS CRTAP
Sbjct: 670 TPWGAVRAYESQRRRCQTWTSILTATRSCQGETRRSSQPRLRPDLWLFSAGQCSFCRTAP 491
Query: 273 SWRRAGTGLGSSFQAGPF 220
W RAGTG GSSFQA PF
Sbjct: 490 LWHRAGTGHGSSFQADPF 437
Score = 137 bits (293), Expect(3) = 1e-048
Identities = 58/78 (74%), Positives = 65/78 (83%)
Frame = +2 / +3
Query: 218 RNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLV 397
RNG AWKLDP PVPAR H+GAVLQ+LH PAE+ HR G +RGWLLRLVSP QLRVA R+LV
Sbjct: 435 RNGSAWKLDP*PVPARCHKGAVLQKLHWPAEKSHRSGRKRGWLLRLVSP*QLRVAVRILV 614
Query: 398 QVRHRLRGLQHARTPPEG 451
QV HRLR L +ART P+G
Sbjct: 615 QVWHRLR*LSYARTAPQG 668
Score = 136 bits (291), Expect(3) = 6e-035
Identities = 58/78 (74%), Positives = 69/78 (88%)
Frame = -1 / -2
Query: 452 RLRVAFERVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHP 273
RL V FER++V+VDDA+LGRV QPLEVV+ERPGEVASHV +L+YG QLA+VA VEPHP
Sbjct: 669 RLGVPFERMKVNVDDAKLGRVS*QPLEVVKERPGEVASHVCALIYGFFQLANVASVEPHP 490
Query: 272 RGVAQVLVSGQVSRLVHS 219
G+AQVLV+GQVSRL+HS
Sbjct: 489 CGIAQVLVTGQVSRLIHS 436
Score = 90.9 bits (192), Expect(3) = 1e-072
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 117 ANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQ 230
ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENG Q
Sbjct: 238 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGTQQ 351
Score = 77.1 bits (162), Expect(3) = 3e-057
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / -3
Query: 223 IPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFA 116
+PFSVM* VGFPYFSLR*FTHPYIPVG M*S LEFA
Sbjct: 344 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 237
Score = 74.8 bits (157), Expect(2) = 2e-022
Identities = 31/42 (73%), Positives = 35/42 (83%)
Frame = +1 / +2
Query: 220 EWTSLET*PETSTCATPRGCGSTGATSAS*RRP*TRERTWLA 345
EW SLET*P TSTCA P+GCGST AT AS*++P* R +TWLA
Sbjct: 437 EWISLET*PVTSTCAMPQGCGSTEATLAS*KKP*IRAQTWLA 562
Score = 67.0 bits (140), Expect(3) = 2e-047
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -1 / -2
Query: 230 LVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRL 114
L+ ++L VD WIPILLLEVVH +HPRR DV+P+RIRL
Sbjct: 351 LLSTILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 235
Score = 65.2 bits (136), Expect(3) = 1e-048
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2 / +3
Query: 116 GEF*VALHRPDGDVRVRELPQGEVWESNDLHNGE 217
GEF*+ALHRPDGDV + ELPQGEVWESN LH E
Sbjct: 237 GEF*LALHRPDGDVWMCELPQGEVWESNCLHYRE 338
Score = 52.4 bits (108), Expect(2) = 2e-022
Identities = 25/38 (65%), Positives = 26/38 (68%)
Frame = +1 / +2
Query: 94 MANRLDHRRILSGSTSPRRGCTGA*TTSRRSMGIQRST 207
+ N RRIL G TS RRGC *TTSRRSMGIQ ST
Sbjct: 215 LTNAWTCRRILIGFTSSRRGCMDV*TTSRRSMGIQLST 328
Score = 35.9 bits (72), Expect(3) = 1e-072
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 65 LAGSICFCTQWQTDWTTG 118
L+ C CTQWQT+WT G
Sbjct: 50 LSHKFCSCTQWQTNWTKG 103
Score = 31.3 bits (62), Expect(3) = 1e-048
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 72 VQYVFARNGKPIGPQANSKWLY 137
+ V ARNGKPIGP+ S +Y
Sbjct: 57 INSVVARNGKPIGPKVCSSSIY 122
Score = 28.6 bits (56), Expect(3) = 6e-035
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -3 / -1
Query: 222 FRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSP 115
+ S CR LDSH RC+A *NSP
Sbjct: 343 YHSR*CRQLDSHTSP*GSSHIHTSPSGRCKAN*NSP 236
Score = 27.6 bits (54), Expect(3) = 3e-057
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 117 PVVQSVCHCVQ 85
P+VQ VCHCVQ
Sbjct: 102 PLVQLVCHCVQ 70
Score = 26.3 bits (51), Expect(3) = 2e-047
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 112 GPIGLPLRAKT 80
GPIGLPLRA T
Sbjct: 97 GPIGLPLRATT 65
Score = 25.4 bits (49), Expect(3) = 6e-035
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -1 / -3
Query: 116 LWSNRFAIAC 87
LWSN FAIAC
Sbjct: 101 LWSNWFAIAC 72
>gb|BM328758.1|BM328758 PIC1_26_B11.g1_A002 Pathogen-infected compatible 1 (PIC1) Sorghum
bicolor cDNA, mRNA sequence
Length = 538
Score = 231 bits (499), Expect(2) = 8e-069
Identities = 86/106 (81%), Positives = 98/106 (92%)
Frame = +3 / +2
Query: 114 QANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRS 293
QANS WLYI P+GMYGCVNYLK+KYGNPT++ITENGMDQPGNLTR+QYL D TRV+FY+
Sbjct: 2 QANSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENGMDQPGNLTREQYLHDTTRVQFYKG 181
Query: 294 YIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNT 431
Y+ +LKKAID GANVAGYFAWSLLDNFEW +GY+SKFGIVYVDF+T
Sbjct: 182 YLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFST 319
Score = 166 bits (357), Expect(2) = 7e-047
Identities = 80/106 (75%), Positives = 82/106 (77%)
Frame = -2 / -2
Query: 430 VLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYW 251
VLKST*T+PNLD P HSKLSRRDQAK*PAT AP SMAFFS * L*N TLV S +Y
Sbjct: 318 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 139
Query: 250 SRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFAC 113
SRVKFPG SIPFSVM VGFPYF R*FT PYIP G M*S EFAC
Sbjct: 138 SRVKFPG*SIPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEFAC 1
Score = 151 bits (324), Expect(2) = 6e-040
Identities = 66/106 (62%), Positives = 84/106 (79%)
Frame = -1 / -1
Query: 431 RVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHPRGVAQVL 252
R EV VD++ELGRV PLEVV+ERP EVASHV +++ G LQL++VA VE HP GV QVL
Sbjct: 319 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 140
Query: 251 VSGQVSRLVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRL 114
++GQVSRL+HSVL Y + WI ILLL++VH +HPR +V+P+ IRL
Sbjct: 139 LTGQVSRLIHSVLSYENCWISILLLQIVHTTIHPRWDNVKPV*IRL 2
Score = 151 bits (324), Expect(2) = 4e-041
Identities = 70/108 (64%), Positives = 79/108 (73%)
Frame = +2 / +1
Query: 113 TGEF*VALHRPDGDVRVRELPQGEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQE 292
TGEF +ALH P GDV + EL + EVW+SN HN ERNG WKLDP V AR H+GA+LQ
Sbjct: 1 TGEFKLALHCPIGDVWLCELSEAEVWKSNSFHN*ERNGSTWKLDP*AVLARHHKGAILQR 180
Query: 293 LHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLVQVRHRLRGLQHAR 436
L R AEE HR RGWLLRLVSP QLRVA R+ VQVR+ LR LQHA+
Sbjct: 181 LPR*AEESHR*RR*RGWLLRLVSP*QLRVAVRLHVQVRNCLRRLQHAQ 324
Score = 122 bits (261), Expect(2) = 9e-031
Identities = 57/106 (53%), Positives = 64/106 (60%)
Frame = -3 / -3
Query: 432 AC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAPSWRRAGT 253
AC*S RR+ RTWT L ATRSC+GET+RSSQPR W SSA R S CR AP W RA T
Sbjct: 320 AC*SRRRQFRTWTCNLTATRSCQGETKRSSQPR*RRHRWLSSAQRGSLCRIAPLWCRAST 141
Query: 252 GLGSSFQAGPFRSPLCRSLDSHXXXXXXXXXXXXXXXRCRAT*NSP 115
GSSFQ PFRS L + LD H +C+A+ NSP
Sbjct: 140 AHGSSFQVDPFRSQL*KLLDFHTSASDSSHNHTSPMGQCKASLNSP 3
Score = 51.0 bits (105), Expect(2) = 8e-069
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3 / +2
Query: 432 LERHPKASAYWFRDMLQKH*DLQSRA* 512
LERHPK SAYWFRDMLQKH* ++A*
Sbjct: 326 LERHPKDSAYWFRDMLQKH*VSNNQA* 406
Score = 42.8 bits (87), Expect(2) = 7e-047
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2 / -2
Query: 517 RAQARLWRSQCF*SMSLNQ*ADAFGWRSSV 428
R QA L +QCF*SMSLNQ*A++ G RSS+
Sbjct: 411 RVQAWLLDTQCF*SMSLNQ*AESLGCRSSL 322
Score = 38.6 bits (78), Expect(2) = 4e-041
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / +1
Query: 431 ARTPPEGVGLLVQGHASEALRSPEPSLS 514
ART P+G LLVQ HASE L +PSL+
Sbjct: 325 ARTTPQGFSLLVQRHASETLSV*QPSLN 408
Score = 34.5 bits (69), Expect(2) = 6e-040
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1 / -1
Query: 512 SGSALEISMLLKHVPEPVGRRLRVAFERVEVHVD 411
SG + S+ LKHV EPVG L V+FE VD
Sbjct: 406 SGLVVRHSVFLKHVSEPVG*ILGVSFELGRAEVD 305
Score = 32.7 bits (65), Expect(2) = 9e-031
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -3 / -3
Query: 510 RLGSGDLNASEACP*TSRPTPSGGVRA 430
RLG L+ SEAC *TSR P G VRA
Sbjct: 404 RLGC*TLSVSEACL*TSRLNPWGVVRA 324
>gb|CW053212.1|CW053212 104_293_10515837_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515837, DNA
sequence
Length = 585
Score = 150 bits (323), Expect(3) = 1e-063
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +3 / -2
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSS 398
GMDQPGNLTR+QYL D TRV+FY+ Y+ +LKKAID GANVAGYFAWSLLDNFEW +GY+S
Sbjct: 386 GMDQPGNLTREQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTS 207
Query: 399 KFGIVYVDFNT 431
KFGIVYVDF+T
Sbjct: 206 KFGIVYVDFST 174
Score = 108 bits (230), Expect(3) = 5e-042
Identities = 54/74 (72%), Positives = 58/74 (78%)
Frame = -2 / +1
Query: 430 VLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYW 251
VLKST*T+PNLD P HSKLSRRDQAK*PAT AP SMAFFS * L*N TLV S +Y
Sbjct: 175 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 354
Query: 250 SRVKFPGWSIPFSV 209
SRVKFPG SIP ++
Sbjct: 355 SRVKFPG*SIPGNI 396
Score = 106 bits (226), Expect(3) = 2e-034
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = -1 / +3
Query: 431 RVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHPRGVAQVL 252
R EV VD++ELGRV PLEVV+ERP EVASHV +++ G LQL++VA VE HP GV QVL
Sbjct: 174 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 353
Query: 251 VSGQVSRLVHS 219
++GQVSRL+HS
Sbjct: 354 LTGQVSRLIHS 386
Score = 104 bits (221), Expect(3) = 8e-036
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = +2 / -1
Query: 218 RNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLV 397
RNG WKLDP V AR H+GA+LQ L R AEE HR RGWLLRLVSP QLRVA R+ V
Sbjct: 387 RNGSTWKLDP*AVLARHHKGAILQRLPR*AEESHR*RR*RGWLLRLVSP*QLRVAVRLHV 208
Query: 398 QVRHRLRGLQHAR 436
QVR+ LR LQHA+
Sbjct: 207 QVRNCLRRLQHAQ 169
Score = 102 bits (217), Expect(2) = 9e-025
Identities = 46/71 (64%), Positives = 49/71 (69%)
Frame = -3 / +2
Query: 432 AC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAPSWRRAGT 253
AC*S RR+ RTWT L ATRSC+GET+RSSQPR W SSA R S CR AP W RA T
Sbjct: 173 AC*SRRRQFRTWTCNLTATRSCQGETKRSSQPR*RRHRWLSSAQRGSLCRIAPLWCRAST 352
Query: 252 GLGSSFQAGPF 220
GSSFQ PF
Sbjct: 353 AHGSSFQVDPF 385
Score = 82.2 bits (173), Expect(3) = 1e-063
Identities = 28/34 (82%), Positives = 32/34 (94%)
Frame = +3 / -2
Query: 120 NSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
NS WLYI P+GMYGCVNYLK+KYGNPT++ITENG
Sbjct: 584 NSNWLYIVPSGMYGCVNYLKQKYGNPTVFITENG 483
Score = 60.2 bits (125), Expect(3) = 5e-042
Identities = 25/35 (71%), Positives = 26/35 (74%)
Frame = -2 / +1
Query: 223 IPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEF 119
+PFSVM VGFPYF R*FT PYIP G M*S EF
Sbjct: 481 VPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFEF 585
Score = 51.0 bits (105), Expect(3) = 1e-063
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3 / -2
Query: 432 LERHPKASAYWFRDMLQKH*DLQSRA* 512
LERHPK SAYWFRDMLQKH* ++A*
Sbjct: 167 LERHPKDSAYWFRDMLQKH*VSNNQA* 87
Score = 47.3 bits (97), Expect(3) = 8e-036
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +2 / -1
Query: 119 EF*VALHRPDGDVRVRELPQGEVWESNDLHNGER 220
EF +ALH P GDV + EL + EVW+SN HN ER
Sbjct: 585 EFKLALHCPIGDVWLCELSEAEVWKSNSFHN*ER 484
Score = 44.1 bits (90), Expect(3) = 2e-034
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1 / +3
Query: 221 SVLRYVDRWIPILLLEVVHAPVHPRRGDVEPL 126
+VL Y + WI ILLL++VH +HPR +V+P+
Sbjct: 483 TVLSYENCWISILLLQIVHTTIHPRWDNVKPV 578
Score = 42.8 bits (87), Expect(3) = 5e-042
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2 / +1
Query: 517 RAQARLWRSQCF*SMSLNQ*ADAFGWRSSV 428
R QA L +QCF*SMSLNQ*A++ G RSS+
Sbjct: 82 RVQAWLLDTQCF*SMSLNQ*AESLGCRSSL 171
Score = 38.6 bits (78), Expect(3) = 8e-036
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 431 ARTPPEGVGLLVQGHASEALRSPEPSLS 514
ART P+G LLVQ HASE L +PSL+
Sbjct: 168 ARTTPQGFSLLVQRHASETLSV*QPSLN 85
Score = 34.5 bits (69), Expect(3) = 2e-034
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1 / +3
Query: 512 SGSALEISMLLKHVPEPVGRRLRVAFERVEVHVD 411
SG + S+ LKHV EPVG L V+FE VD
Sbjct: 87 SGLVVRHSVFLKHVSEPVG*ILGVSFELGRAEVD 188
Score = 32.7 bits (65), Expect(2) = 9e-025
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 510 RLGSGDLNASEACP*TSRPTPSGGVRA 430
RLG L+ SEAC *TSR P G VRA
Sbjct: 89 RLGC*TLSVSEACL*TSRLNPWGVVRA 169
>gb|CW053339.1|CW053339 104_293_10515908_115_30191 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515908, DNA
sequence
Length = 582
Score = 150 bits (323), Expect(3) = 7e-063
Identities = 57/71 (80%), Positives = 65/71 (91%)
Frame = +3 / -2
Query: 219 GMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSS 398
GMDQPGNLTR+QYL D TRV+FY+ Y+ +LKKAID GANVAGYFAWSLLDNFEW +GY+S
Sbjct: 386 GMDQPGNLTREQYLHDTTRVQFYKGYLAELKKAIDDGANVAGYFAWSLLDNFEWQSGYTS 207
Query: 399 KFGIVYVDFNT 431
KFGIVYVDF+T
Sbjct: 206 KFGIVYVDFST 174
Score = 108 bits (230), Expect(3) = 3e-041
Identities = 54/74 (72%), Positives = 58/74 (78%)
Frame = -2 / +1
Query: 430 VLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYW 251
VLKST*T+PNLD P HSKLSRRDQAK*PAT AP SMAFFS * L*N TLV S +Y
Sbjct: 175 VLKST*TIPNLDV*PDCHSKLSRRDQAK*PATLAPSSMAFFSSAR*PL*NCTLVVSCKYC 354
Query: 250 SRVKFPGWSIPFSV 209
SRVKFPG SIP ++
Sbjct: 355 SRVKFPG*SIPGNI 396
Score = 106 bits (226), Expect(3) = 2e-034
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = -1 / +3
Query: 431 RVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLADVAPVEPHPRGVAQVL 252
R EV VD++ELGRV PLEVV+ERP EVASHV +++ G LQL++VA VE HP GV QVL
Sbjct: 174 RAEVDVDNSELGRVT*LPLEVVKERPSEVASHVSAVIDGFLQLSEVAFVELHPCGVVQVL 353
Query: 251 VSGQVSRLVHS 219
++GQVSRL+HS
Sbjct: 354 LTGQVSRLIHS 386
Score = 104 bits (221), Expect(3) = 4e-035
Identities = 49/73 (67%), Positives = 54/73 (73%)
Frame = +2 / -1
Query: 218 RNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLVSPRQLRVAGRVLV 397
RNG WKLDP V AR H+GA+LQ L R AEE HR RGWLLRLVSP QLRVA R+ V
Sbjct: 387 RNGSTWKLDP*AVLARHHKGAILQRLPR*AEESHR*RR*RGWLLRLVSP*QLRVAVRLHV 208
Query: 398 QVRHRLRGLQHAR 436
QVR+ LR LQHA+
Sbjct: 207 QVRNCLRRLQHAQ 169
Score = 102 bits (217), Expect(2) = 9e-025
Identities = 46/71 (64%), Positives = 49/71 (69%)
Frame = -3 / +2
Query: 432 AC*SPRRRCRTWTSTLPATRSCRGETRRSSQPRSLPGLWPSSAGRCSSCRTAPSWRRAGT 253
AC*S RR+ RTWT L ATRSC+GET+RSSQPR W SSA R S CR AP W RA T
Sbjct: 173 AC*SRRRQFRTWTCNLTATRSCQGETKRSSQPR*RRHRWLSSAQRGSLCRIAPLWCRAST 352
Query: 252 GLGSSFQAGPF 220
GSSFQ PF
Sbjct: 353 AHGSSFQVDPF 385
Score = 79.4 bits (167), Expect(3) = 7e-063
Identities = 27/33 (81%), Positives = 31/33 (93%)
Frame = +3 / -2
Query: 123 SKWLYIAPTGMYGCVNYLKEKYGNPTIYITENG 221
S WLYI P+GMYGCVNYLK+KYGNPT++ITENG
Sbjct: 581 SNWLYIVPSGMYGCVNYLKQKYGNPTVFITENG 483
Score = 57.4 bits (119), Expect(3) = 3e-041
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = -2 / +1
Query: 223 IPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLE 122
+PFSVM VGFPYF R*FT PYIP G M*S E
Sbjct: 481 VPFSVMKTVGFPYFCFR*FTQPYIPDGTM*SQFE 582
Score = 51.0 bits (105), Expect(3) = 7e-063
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3 / -2
Query: 432 LERHPKASAYWFRDMLQKH*DLQSRA* 512
LERHPK SAYWFRDMLQKH* ++A*
Sbjct: 167 LERHPKDSAYWFRDMLQKH*VSNNQA* 87
Score = 45.1 bits (92), Expect(3) = 4e-035
Identities = 19/33 (57%), Positives = 23/33 (69%)
Frame = +2 / -1
Query: 122 F*VALHRPDGDVRVRELPQGEVWESNDLHNGER 220
F +ALH P GDV + EL + EVW+SN HN ER
Sbjct: 582 FKLALHCPIGDVWLCELSEAEVWKSNSFHN*ER 484
Score = 44.1 bits (90), Expect(3) = 2e-034
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1 / +3
Query: 221 SVLRYVDRWIPILLLEVVHAPVHPRRGDVEPL 126
+VL Y + WI ILLL++VH +HPR +V+P+
Sbjct: 483 TVLSYENCWISILLLQIVHTTIHPRWDNVKPV 578
Score = 42.8 bits (87), Expect(3) = 3e-041
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = -2 / +1
Query: 517 RAQARLWRSQCF*SMSLNQ*ADAFGWRSSV 428
R QA L +QCF*SMSLNQ*A++ G RSS+
Sbjct: 82 RVQAWLLDTQCF*SMSLNQ*AESLGCRSSL 171
Score = 38.6 bits (78), Expect(3) = 4e-035
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +2 / -1
Query: 431 ARTPPEGVGLLVQGHASEALRSPEPSLS 514
ART P+G LLVQ HASE L +PSL+
Sbjct: 168 ARTTPQGFSLLVQRHASETLSV*QPSLN 85
Score = 34.5 bits (69), Expect(3) = 2e-034
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = -1 / +3
Query: 512 SGSALEISMLLKHVPEPVGRRLRVAFERVEVHVD 411
SG + S+ LKHV EPVG L V+FE VD
Sbjct: 87 SGLVVRHSVFLKHVSEPVG*ILGVSFELGRAEVD 188
Score = 32.7 bits (65), Expect(2) = 9e-025
Identities = 17/27 (62%), Positives = 18/27 (66%)
Frame = -3 / +2
Query: 510 RLGSGDLNASEACP*TSRPTPSGGVRA 430
RLG L+ SEAC *TSR P G VRA
Sbjct: 89 RLGC*TLSVSEACL*TSRLNPWGVVRA 169
>gb|CD222337.1|CD222337 CCC1_21_H03.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_21_H03_A007 3', mRNA sequence
Length = 493
Score = 236 bits (509), Expect = 4e-061
Identities = 88/134 (65%), Positives = 110/134 (82%)
Frame = +3 / +3
Query: 78 YVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQY 257
+V+ RNG PIGP+ANS WLYI P G+Y V Y+KEKYG PT++++ENGMD PGN+T Q
Sbjct: 3 FVYERNGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGTPTMFLSENGMDDPGNVTVAQG 182
Query: 258 LRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLE 437
+ DATRV +YRSYI +LK+AID GAN GYFAWSLLDN EW GY+++FG+VYVDF TL
Sbjct: 183 VHDATRVAYYRSYITKLKEAIDGGANCVGYFAWSLLDNLEWKLGYTARFGLVYVDFKTLR 362
Query: 438 RHPKASAYWFRDML 479
R+PK+SAYWFRD++
Sbjct: 363 RYPKSSAYWFRDVI 404
Score = 153 bits (328), Expect = 4e-036
Identities = 81/131 (61%), Positives = 88/131 (67%)
Frame = -2 / -1
Query: 472 SLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM* 293
SLNQ A+ G+R SVLKST*T PNL P+ HSKLS RDQAK*P AP S+A FS M*
Sbjct: 397 SLNQYAELLGYRRSVLKST*TRPNLAV*PSFHSKLSSRDQAK*PTQLAPPSIASFSLVM* 218
Query: 292 LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFAC 113
L * TLVAS W+ V PG S+PFS IVG PYFSL * T Y P G M*S EFA
Sbjct: 217 LR**ATLVASCTPWATVTLPGSSMPFSDRNIVGVPYFSLT*VTALYSPQGTM*SQSEFAL 38
Query: 112 GPIGLPLRAKT 80
GPIG PLR+ T
Sbjct: 37 GPIGTPLRS*T 5
>gb|BG158722.1|BG158722 RHIZ2_44_D05.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 540
Score = 214 bits (461), Expect = 2e-054
Identities = 82/132 (62%), Positives = 101/132 (76%)
Frame = +3 / +2
Query: 90 RNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDA 269
RN PIG ANS WLYI P G+ VNY+KE Y NPT+ + ENGMDQPG+++ Q + D
Sbjct: 5 RNSIPIGAHANSYWLYIVPWGINKAVNYVKETYENPTMILAENGMDQPGDISITQGVHDT 184
Query: 270 TRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPK 449
R+R+YR YI +LKKAID GA V GYFAWSLLDNFEW GY+S+FG+VYVD+ TL+R+PK
Sbjct: 185 IRIRYYRDYITELKKAIDDGARVIGYFAWSLLDNFEWRLGYTSRFGLVYVDYKTLKRYPK 364
Query: 450 ASAYWFRDMLQK 485
SA+WF+ ML K
Sbjct: 365 DSAFWFKHMLSK 400
Score = 79.9 bits (168), Expect(2) = 1e-024
Identities = 42/74 (56%), Positives = 50/74 (67%)
Frame = -2 / -1
Query: 484 F*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFS 305
F S+ LNQ A++ G+ VL ST*T PN + YP+ HSKLS D AK*P T AP S+AFFS
Sbjct: 399 FESICLNQKAESLGYLFKVL*ST*TKPNREVYPSLHSKLSSSDHAK*PMTLAPSSIAFFS 220
Query: 304 WPM*LL*NRTLVAS 263
M* L* R L+ S
Sbjct: 219 SVM*SL**RILIVS 178
Score = 54.7 bits (113), Expect(2) = 1e-024
Identities = 28/50 (56%), Positives = 30/50 (60%)
Frame = -2 / -1
Query: 235 PGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGPIGLPLRA 86
PGWSIPFS IVGF SL * T IP G M S EFA PIG+ R+
Sbjct: 150 PGWSIPFSARIIVGFS*VSLT*LTALLIPHGTMYSQ*EFA*APIGMLFRS 1
>gb|BG356442.1|BG356442 EM1_22_F02.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 356
Score = 208 bits (449), Expect = 8e-053
Identities = 77/118 (65%), Positives = 96/118 (81%)
Frame = +3 / +2
Query: 54 YSADWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQP 233
YS+DW ++V+ RNG PIGP+ANS WLYI P G+Y V Y+KEKYGNPT++++ENGMD P
Sbjct: 2 YSSDWHAEFVYERNGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDP 181
Query: 234 GNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFG 407
GN+T Q + DATRV +YRSYI +LK+AID GAN GYFAWSLLDNFEW GY+++FG
Sbjct: 182 GNVTVAQGVHDATRVAYYRSYITKLKEAIDGGANCVGYFAWSLLDNFEWKVGYTARFG 355
Score = 129 bits (276), Expect = 6e-029
Identities = 69/117 (58%), Positives = 73/117 (62%)
Frame = -2 / -3
Query: 406 PNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYWSRVKFPGW 227
PNL P HSKLS RDQAK P AP S+A FS M*L * TLVAS W+ V PG
Sbjct: 354 PNLAV*PTFHSKLSSRDQAKYPTQLAPPSIASFSLVM*LR**ATLVASCTPWATVTLPGS 175
Query: 226 SIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFACGPIGLPLRAKTY*TCQSAE 56
S+PFS IVG PYFSL * T Y P G M*S EFA GPIG PLR+ T CQS E
Sbjct: 174 SMPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTPLRS*TNSACQSEE 4
>gb|BF587914.1|BF587914 FM1_34_D09.g1_A003 Floral-Induced Meristem 1 (FM1) Sorghum
propinquum cDNA, mRNA sequence
Length = 584
Score = 192 bits (413), Expect = 7e-048
Identities = 73/100 (73%), Positives = 86/100 (86%)
Frame = +3 / +3
Query: 180 EKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWS 359
EKY NPTI I+ENGMDQP +LTR++YL D R+ FY++Y+ +LKK ID GANV GYFAWS
Sbjct: 3 EKYQNPTIIISENGMDQPADLTREEYLHDTVRIDFYKNYLTELKKGIDDGANVVGYFAWS 182
Query: 360 LLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDML 479
LLDNFEWL+GY+SKFGIVYVDF TL+R+PK SA WFRDML
Sbjct: 183 LLDNFEWLSGYTSKFGIVYVDFTTLKRYPKDSACWFRDML 302
Score = 127 bits (271), Expect = 3e-028
Identities = 65/100 (65%), Positives = 72/100 (72%)
Frame = -2 / -2
Query: 478 SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWP 299
SMSLNQ A++ G+R SV+KST*TMPNLD P SHSKLSRRD AK*P TFAP S+ FFS
Sbjct: 301 SMSLNQHAESLGYRLSVVKST*TMPNLDV*PDSHSKLSRRDHAK*PTTFAPSSIPFFSSV 122
Query: 298 M*LL*NRTLVASRRYWSRVKFPGWSIPFSVM*IVGFPYFS 179
* L* S RY SRV+ G SIPFS M +VGF YFS
Sbjct: 121 R*FL*KSIRTVS*RYSSRVRSAG*SIPFSDMMMVGFWYFS 2
Score = 115 bits (245), Expect = 1e-024
Identities = 56/99 (56%), Positives = 65/99 (65%)
Frame = -1 / -1
Query: 479 KHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLA 300
+HVPEP R L V ER EV VDDAELGRV QPLEVV+E P EVA HV ++V LQL
Sbjct: 302 EHVPEPARRVLGVPLERREVDVDDAELGRVARQPLEVVQEGPREVAHHVCAVVDPFLQLR 123
Query: 299 DVAPVEPHPRGVAQVLVSGQVSRLVHSVLRYVDRWIPIL 183
V VE P V +VL++ QV RL+H V Y D WI +L
Sbjct: 122 QVVLVEVDPNRVVKVLLACQVCRLIHPVFGYDDGWILVL 6
Score = 103 bits (220), Expect = 3e-021
Identities = 52/100 (52%), Positives = 65/100 (65%)
Frame = +2 / +2
Query: 179 GEVWESNDLHNGERNGPAWKLDPRPVPARRHEGAVLQELHRPAEEGHRPGSERGWLLRLV 358
G+V ESN H +R+G + D R VP+R +LQEL AEE R +RG LLR+V
Sbjct: 2 GKVPESNHHHIRKRDGSTCRPDTRGVPSRHGSDRLLQELPDGAEERDRRRRKRGGLLRVV 181
Query: 359 SPRQLRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHA 478
P QLRVA + VQVRHRLR L A+ P+G+G+LVQGHA
Sbjct: 182 PPGQLRVAVGLHVQVRHRLRRLHDAQAVPQGLGVLVQGHA 301
>gb|AW923660.1|AW923660 DG1_57_B08.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 389
Score = 188 bits (405), Expect = 9e-047
Identities = 71/106 (66%), Positives = 87/106 (82%)
Frame = +3 / +3
Query: 114 QANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRS 293
QANS WLYI P G+Y V Y+KEKYGNPT++++ENGMD PGN+T Q + DATRV +YR+
Sbjct: 72 QANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDPGNVTVAQGVHDATRVAYYRN 251
Query: 294 YIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNT 431
YI +LK+AID GAN GYFAWSLLDNFEW GY+++FG+VYVDF T
Sbjct: 252 YITKLKEAIDGGANCVGYFAWSLLDNFEWKVGYTARFGLVYVDFKT 389
Score = 115 bits (245), Expect(2) = 6e-028
Identities = 64/106 (60%), Positives = 67/106 (63%)
Frame = -2 / -2
Query: 430 VLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYW 251
VLKST*T PNL P HSKLS RDQAK*P AP S+A FS M* * TLVAS
Sbjct: 388 VLKST*TRPNLAV*PTFHSKLSSRDQAK*PTQLAPPSIASFSLVM*FR**ATLVASCTPC 209
Query: 250 SRVKFPGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFAC 113
+ V PG S+PFS IVG PYFSL * T Y P G M*S EFAC
Sbjct: 208 ATVTLPGSSMPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFAC 71
Score = 30.4 bits (60), Expect(2) = 6e-028
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = -2 / -1
Query: 127 LEFACGPIGLPLRAKTY*TCQSAE 56
L+++ GPIG PLR+ T CQS E
Sbjct: 74 LQWSLGPIGTPLRS*TNSACQS*E 3
>gb|CF488801.1|CF488801 POL1_52_G01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_52_G01_A002 3', mRNA sequence
Length = 586
Score = 178 bits (384), Expect = 7e-044
Identities = 69/140 (49%), Positives = 95/140 (67%)
Frame = +3 / +2
Query: 63 DWQVQYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNL 242
DW + + R+G PIGP+ S WLY+ P G+Y + + KEK+ NP + I ENG+DQ GN
Sbjct: 5 DWHAKISYERDGVPIGPRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNE 184
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T L D R+ +++ + +L+ AI GANV GYF WSLLDNFEW GY+S+FGIV+VD
Sbjct: 185 TLPHALYDKFRIDYFQKSLQELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVD 364
Query: 423 FNTLERHPKASAYWFRDMLQ 482
+T R+PK SA WFR +++
Sbjct: 365 RSTFVRYPKDSARWFRKVIK 424
>gb|CD234207.1|CD234207 SS1_26_D01.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_26_D01_A012 3', mRNA sequence
Length = 552
Score = 177 bits (382), Expect = 1e-043
Identities = 66/88 (75%), Positives = 78/88 (88%)
Frame = +3 / +3
Query: 216 NGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYS 395
NGMDQPG+LTR++YL D R+ FY++Y+ +LKK ID GANV GYFAWSLLDNFEWL+GY+
Sbjct: 3 NGMDQPGDLTREEYLHDTVRIDFYKNYLTELKKGIDDGANVVGYFAWSLLDNFEWLSGYT 182
Query: 396 SKFGIVYVDFNTLERHPKASAYWFRDML 479
SKFGIVYVDF TL+R+PK SAYWFRDML
Sbjct: 183 SKFGIVYVDFTTLKRYPKDSAYWFRDML 266
Score = 116 bits (247), Expect = 6e-025
Identities = 58/88 (65%), Positives = 64/88 (72%)
Frame = -2 / -3
Query: 478 SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWP 299
SMSLNQ A++ G+R SV+KST*TMPNLD P SHSKLSRRD AK*P TFAP S+ FFS
Sbjct: 265 SMSLNQYAESLGYRLSVVKST*TMPNLDV*PDSHSKLSRRDHAK*PTTFAPSSIPFFSSV 86
Query: 298 M*LL*NRTLVASRRYWSRVKFPGWSIPF 215
* L* S RY SRV+ PG SIPF
Sbjct: 85 R*FL*KSIRTVS*RYSSRVRSPG*SIPF 2
Score = 107 bits (229), Expect = 2e-022
Identities = 53/88 (60%), Positives = 61/88 (69%)
Frame = -1 / -2
Query: 479 KHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEVVEERPGEVASHVRSLVYGLLQLA 300
+HVPEPV R L V ER EV VDDAELGRV QPLEVV+E P EVA HV ++V LQL
Sbjct: 266 EHVPEPVRRVLGVPLERREVDVDDAELGRVARQPLEVVQEGPREVAHHVCAVVDPFLQLR 87
Query: 299 DVAPVEPHPRGVAQVLVSGQVSRLVHSV 216
V VE P V +VL++ QVSRL+H V
Sbjct: 86 QVVLVEVDPNRVVKVLLACQVSRLIHPV 3
>gb|CF489056.1|CF489056 POL1_54_D01.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_54_D01_A002 3', mRNA sequence
Length = 565
Score = 177 bits (380), Expect = 3e-043
Identities = 69/136 (50%), Positives = 94/136 (69%)
Frame = +3 / +1
Query: 75 QYVFARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQ 254
Q + R+G PIGP+ S WLY+ P G+Y + + KEK+ NP + I ENG+DQ GN T
Sbjct: 1 QISYERDGVPIGPRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETLPH 180
Query: 255 YLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTL 434
L D R+ +++ Y+ +L+ AI GANV GYF WSLLDNFEW GY+S+FGIV+VD +T
Sbjct: 181 ALYDKFRIDYFQKYLQELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTF 360
Query: 435 ERHPKASAYWFRDMLQ 482
R+PK SA WFR +++
Sbjct: 361 VRYPKDSARWFRKVIK 408
>gb|CF483885.1|CF483885 POL1_1_G10.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_1_G10_A002 3', mRNA sequence
Length = 557
Score = 176 bits (378), Expect = 5e-043
Identities = 68/133 (51%), Positives = 93/133 (69%)
Frame = +3 / +2
Query: 84 FARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLR 263
+ R+G PIGP+ S WLY+ P G+Y + + KEK+ NP + I ENG+DQ GN T L
Sbjct: 11 YERDGVPIGPRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETLPHALY 190
Query: 264 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERH 443
D R+ +++ Y+ +L+ AI GANV GYF WSLLDNFEW GY+S+FGIV+VD +T R+
Sbjct: 191 DKFRIDYFQKYLQELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRY 370
Query: 444 PKASAYWFRDMLQ 482
PK SA WFR +++
Sbjct: 371 PKDSARWFRKVIK 409
>gb|BG355936.2|BG355936 EM1_18_E01.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA
sequence
Length = 476
Score = 175 bits (377), Expect = 7e-043
Identities = 67/112 (59%), Positives = 86/112 (76%)
Frame = +3 / +3
Query: 150 GMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAIDQG 329
G+ VNY+KE Y N T+ + ENGMDQPG+++ Q + D R+R+YR YI +LKKAI G
Sbjct: 3 GINKAVNYVKETYENRTMILAENGMDQPGDISITQGVHDTIRIRYYRDYITELKKAIADG 182
Query: 330 ANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQK 485
A V GYFAWSLLDNFEW GY+S+FG+VYVD+ TL+R+PK SA+WF+ ML K
Sbjct: 183 ARVIGYFAWSLLDNFEWRLGYTSRFGLVYVDYKTLKRYPKDSAFWFKHMLSK 338
>gb|BE359792.1|BE359792 DG1_57_B08.g2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 374
Score = 175 bits (376), Expect = 9e-043
Identities = 66/100 (66%), Positives = 82/100 (82%)
Frame = +3 / +1
Query: 114 QANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRS 293
QANS WLYI P G+Y V Y+KEKYGNPT++++ENGMD PGN+T Q + DATRV +YR+
Sbjct: 73 QANSDWLYIVPWGLYKAVTYVKEKYGNPTMFLSENGMDDPGNVTVAQGVHDATRVAYYRN 252
Query: 294 YIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIV 413
YI +LK+AID GAN GYFAWSLLDNFEW GY+++FG+V
Sbjct: 253 YITKLKEAIDGGANCVGYFAWSLLDNFEWKLGYTARFGLV 372
Score = 111 bits (237), Expect(2) = 2e-027
Identities = 60/101 (59%), Positives = 64/101 (63%)
Frame = -2 / -1
Query: 415 *TMPNLDEYPASHSKLSRRDQAK*PATFAPWSMAFFSWPM*LL*NRTLVASRRYWSRVKF 236
*T PNL P+ HSKLS RDQAK*P AP S+A FS M* * TLVAS W+ V
Sbjct: 374 *TRPNLAV*PSFHSKLSSRDQAK*PTQLAPPSIASFSLVM*FR**ATLVASCTPWATVTL 195
Query: 235 PGWSIPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFAC 113
PG S+PFS IVG PYFSL * T Y P G M*S EFAC
Sbjct: 194 PGSSMPFSDRNIVGLPYFSLT*VTALYSPQGTM*SQSEFAC 72
Score = 32.2 bits (64), Expect(2) = 2e-027
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -2 / -3
Query: 127 LEFACGPIGLPLRAKTY*TCQSAE* 53
L+++ GPIG PLR+ T CQS E*
Sbjct: 75 LQWSLGPIGTPLRS*TNSACQSEE* 1
>gb|CF480940.1|CF480940 POL1_69_B07.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_69_B07_A002 3', mRNA sequence
Length = 567
Score = 172 bits (371), Expect = 5e-042
Identities = 67/133 (50%), Positives = 92/133 (69%)
Frame = +3 / +2
Query: 84 FARNGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLR 263
+ R+G PIGP+ S WLY+ P G+Y + + KEK+ NP + I ENG+DQ GN T L
Sbjct: 11 YERDGVPIGPRGYSDWLYVVPWGLYKALIWAKEKFNNPVMLIGENGIDQSGNETLPHALY 190
Query: 264 DATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERH 443
D R+ +++ Y+ +L+ AI ANV GYF WSLLDNFEW GY+S+FGIV+VD +T R+
Sbjct: 191 DKFRIDYFQKYLQELQYAIRDDANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRY 370
Query: 444 PKASAYWFRDMLQ 482
PK SA WFR +++
Sbjct: 371 PKDSARWFRKVIK 409
>gb|AI724868.1|AI724868 RHIZ1_30_D02.y3_A001 Rhizome1 (RHIZ1) Sorghum halepense cDNA, mRNA
sequence
Length = 396
Score = 96.4 bits (204), Expect(3) = 6e-041
Identities = 38/39 (97%), Positives = 39/39 (100%)
Frame = +3 / +3
Query: 381 LAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL 497
L+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL
Sbjct: 3 LSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL 119
Score = 82.2 bits (173), Expect(3) = 5e-038
Identities = 39/52 (75%), Positives = 41/52 (78%)
Frame = -2 / -3
Query: 535 EQNGTFRAQARLWRSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPAS 380
+ + TFR RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP S
Sbjct: 157 QNSTTFRLGGPS*RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDS 2
Score = 78.0 bits (164), Expect(3) = 4e-033
Identities = 34/46 (73%), Positives = 38/46 (82%)
Frame = -1 / -2
Query: 527 WYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRV 390
+YL LEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV
Sbjct: 149 YYLQARRP*LEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRV 12
Score = 75.3 bits (158), Expect(3) = 7e-025
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = -3 / -1
Query: 528 MVPSVLRLGSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPA 379
++PS + DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L A
Sbjct: 150 VLPSGSAALARDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTA 1
Score = 74.8 bits (157), Expect(3) = 5e-033
Identities = 34/51 (66%), Positives = 40/51 (78%)
Frame = +2 / +2
Query: 380 AGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHASEALRSPEPSLSTEGTIL 532
A R+LVQV HRLR LQ+ART P+GVGLLVQGHASEALRS + EG+ +
Sbjct: 2 AVRILVQVWHRLR*LQYARTAPQGVGLLVQGHASEALRSLARAAEPEGSTI 154
Score = 65.2 bits (136), Expect(3) = 5e-038
Identities = 27/37 (72%), Positives = 32/37 (86%)
Frame = -3 / -1
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN*S LSF+PIL+A+H GFEPLG+PKH AKLNK+V
Sbjct: 258 HN*SEWLSFIPILLAKHKGGFEPLGNPKHEAKLNKIV 148
Score = 64.8 bits (135), Expect(3) = 6e-041
Identities = 26/36 (72%), Positives = 29/36 (80%)
Frame = +2 / +2
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNP CLA+KMG K+S+ DQL
Sbjct: 149 TILFSFASCFGLPNGSNPPLCLASKMGIKESHSDQL 256
Score = 60.2 bits (125), Expect(3) = 5e-033
Identities = 25/37 (67%), Positives = 26/37 (70%)
Frame = +3 / +3
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI AWL KWE + ATPINC
Sbjct: 147 VLFCSALPRVLDCPMVQIHPCAWLAKWE*KRATPINC 257
Score = 60.2 bits (125), Expect(3) = 4e-033
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = -1 / -2
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TIDR LFPF *P T DLNHWAI NTR+S*TK Y
Sbjct: 257 TIDRSGSLLFPFC*PSTRVDLNHWAIQNTRQS*TK*Y 147
Score = 54.2 bits (112), Expect(3) = 7e-025
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+QLIGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 259 AQLIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 146
Score = 50.1 bits (103), Expect(3) = 5e-038
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -1 / -2
Query: 716 SISNTINQHDKITTAQTPERTYPQTHN 636
SISN INQHDKITT+QTP+RTY + +
Sbjct: 359 SISNKINQHDKITTSQTPQRTYSDSQH 279
Score = 46.4 bits (95), Expect(3) = 6e-041
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 651 VCSLWSLSCGYFIVLVDRV*NA 716
VCSLW L CGYFIVL+D +*NA
Sbjct: 294 VCSLWRLRCGYFIVLIDLI*NA 359
Score = 45.5 bits (93), Expect(3) = 5e-033
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +2 / +2
Query: 641 VFVGMFSLEFELWLFYRVG*SCLKCLIQD 727
V + MFS+ FE+WLFYRV *S LKC +++
Sbjct: 284 VSLSMFSVAFEMWLFYRVD*SYLKCFVRN 370
Score = 42.8 bits (87), Expect(3) = 4e-033
Identities = 18/25 (72%), Positives = 18/25 (72%)
Frame = -2 / -3
Query: 715 AFQTRSTNTIK*PQLKLQREHTHKH 641
AFQ RS NTIK*P LK REHT H
Sbjct: 358 AFQIRSINTIK*PHLKRHREHTQTH 284
Score = 23.5 bits (45), Expect(3) = 7e-025
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3 / -1
Query: 717 KHFKHDQPTRXXXXXXXSRENI 652
KHFK DQ TR + ENI
Sbjct: 360 KHFK*DQSTR*NNHISNATENI 295
>gb|CW304526.1|CW304526 104_789_11465829_116_35701_087 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465829, DNA
sequence
Length = 610
Score = 90.9 bits (192), Expect(4) = 6e-041
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3 / +1
Query: 117 ANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQ 230
ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENG Q
Sbjct: 367 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGTQQ 480
Score = 77.1 bits (162), Expect(4) = 7e-033
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / -3
Query: 223 IPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFA 116
+PFSVM* VGFPYFSLR*FTHPYIPVG M*S LEFA
Sbjct: 473 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 366
Score = 67.0 bits (140), Expect(4) = 5e-027
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -1 / -2
Query: 230 LVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRL 114
L+ ++L VD WIPILLLEVVH +HPRR DV+P+RIRL
Sbjct: 480 LLSTILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 364
Score = 65.2 bits (136), Expect(4) = 3e-029
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2 / +3
Query: 116 GEF*VALHRPDGDVRVRELPQGEVWESNDLHNGE 217
GEF*+ALHRPDGDV + ELPQGEVWESN LH E
Sbjct: 366 GEF*LALHRPDGDVWMCELPQGEVWESNCLHYRE 467
Score = 60.6 bits (126), Expect(4) = 6e-041
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3 / +3
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYV 83
TSSYMKGQKL+Q PSSYSADWQVQYV
Sbjct: 21 TSSYMKGQKLLQQTPSSYSADWQVQYV 101
Score = 57.9 bits (120), Expect(4) = 7e-033
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2 / -1
Query: 88 AKTY*TCQSAE*LLGASWTSFCPFM*LDV 2
++TY TCQSAE*LLG W+SFCPFM*LDV
Sbjct: 106 SQTYWTCQSAE*LLGVCWSSFCPFM*LDV 20
Score = 54.2 bits (112), Expect(4) = 5e-027
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -1 / -3
Query: 83 NILNLPIGRVATGRQLDQLLPLHVAGC 3
NIL+LPIGRVATGR L+Q L LHVAGC
Sbjct: 101 NILDLPIGRVATGRLLEQFLSLHVAGC 21
Score = 53.3 bits (110), Expect(4) = 3e-029
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1 / +1
Query: 1 THPAT*RGRSWSSWRPVATLPIGRFNMFL 87
THPAT*R R+ SS RPVATLPIGR NMF+
Sbjct: 19 THPAT*RDRNCSSRRPVATLPIGRSNMFV 105
Score = 40.5 bits (82), Expect(4) = 6e-041
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +3 / +1
Query: 219 GMDQPGNLTRDQYLR 263
GMDQPGNLTRDQYLR
Sbjct: 565 GMDQPGNLTRDQYLR 609
Score = 37.7 bits (76), Expect(4) = 7e-033
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2 / -3
Query: 262 RRYWSRVKFPGWSIP 218
RRYWSRVKFPG SIP
Sbjct: 608 RRYWSRVKFPG*SIP 564
Score = 35.9 bits (72), Expect(4) = 6e-041
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / +2
Query: 65 LAGSICFCTQWQTDWTTG 118
L+ C CTQWQT+WT G
Sbjct: 179 LSHKFCSCTQWQTNWTKG 232
Score = 35.4 bits (71), Expect(4) = 3e-029
Identities = 13/15 (86%), Positives = 13/15 (86%)
Frame = +2 / +3
Query: 218 RNGPAWKLDPRPVPA 262
RNG AWKLDP PVPA
Sbjct: 564 RNGSAWKLDP*PVPA 608
Score = 32.7 bits (65), Expect(4) = 5e-027
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -1 / -2
Query: 263 AQVLVSGQVSRLVHS 219
AQVLV+GQVSRL+HS
Sbjct: 609 AQVLVTGQVSRLIHS 565
Score = 31.3 bits (62), Expect(4) = 3e-029
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3 / +3
Query: 72 VQYVFARNGKPIGPQANSKWLY 137
+ V ARNGKPIGP+ S +Y
Sbjct: 186 INSVVARNGKPIGPKVCSSSIY 251
Score = 27.6 bits (54), Expect(4) = 7e-033
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / -2
Query: 117 PVVQSVCHCVQ 85
P+VQ VCHCVQ
Sbjct: 231 PLVQLVCHCVQ 199
Score = 26.3 bits (51), Expect(4) = 5e-027
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 112 GPIGLPLRAKT 80
GPIGLPLRA T
Sbjct: 226 GPIGLPLRATT 194
>gb|BG558112.1|BG558112 RHIZ2_67_A03.g1_A003 Rhizome2 (RHIZ2) Sorghum propinquum cDNA, mRNA
sequence
Length = 330
Score = 109 bits (233), Expect(3) = 2e-039
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +3 / +1
Query: 369 NFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DLQSR 506
NFEWL+GYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL R
Sbjct: 1 NFEWLSGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQKH*DL*GR 138
Score = 92.7 bits (196), Expect(3) = 3e-034
Identities = 41/54 (75%), Positives = 45/54 (83%)
Frame = -1 / -1
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVHVDDAELGRVPCQPLEV 369
K LP +ALEISMLLKHVPEPVGRRL V FER+EV+VDDA+LGRV QPLEV
Sbjct: 162 KIVLPSGSAALEISMLLKHVPEPVGRRLGVPFERIEVNVDDAKLGRVS*QPLEV 1
Score = 87.2 bits (184), Expect(2) = 2e-028
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = -2 / -2
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKST*TMPNLDEYPASHSK 371
RSQCF*SMSLNQ*ADA G RSSVLKST*TMPNLDEYP SHSK
Sbjct: 128 RSQCF*SMSLNQ*ADALGCRSSVLKST*TMPNLDEYPDSHSK 3
Score = 82.6 bits (174), Expect(2) = 2e-025
Identities = 36/45 (80%), Positives = 37/45 (82%)
Frame = -3 / -3
Query: 504 GSGDLNASEACP*TSRPTPSGGVRAC*SPRRRCRTWTSTLPATRS 370
G DLNASEACP*TSRPTP G VRA *S RRRC+TWTS L ATRS
Sbjct: 136 GPRDLNASEACP*TSRPTPWGAVRAY*SQRRRCQTWTSILTATRS 2
Score = 79.0 bits (166), Expect(3) = 2e-027
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +2 / +3
Query: 371 LRVAGRVLVQVRHRLRGLQHARTPPEGVGLLVQGHASEALRSPEP 505
LRVA R+LVQV HRLR LQ+ART P+GVGLLVQGHASEALRS P
Sbjct: 3 LRVAVRILVQVWHRLR*LQYARTAPQGVGLLVQGHASEALRSLGP 137
Score = 67.0 bits (140), Expect(3) = 2e-039
Identities = 27/36 (75%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ DQL
Sbjct: 155 TILFSFASCFGLPNGSNPALCLASKMGIKESHSDQL 262
Score = 67.0 bits (140), Expect(3) = 3e-034
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = -3 / -1
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN*S LSF+PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 264 HN*SEWLSFIPILLAKHKAGFEPLGNPKHEAKLNKIV 154
Score = 60.6 bits (126), Expect(3) = 2e-027
Identities = 25/37 (67%), Positives = 27/37 (72%)
Frame = +3 / +3
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATPINC
Sbjct: 153 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPINC 263
Score = 59.7 bits (124), Expect(2) = 2e-028
Identities = 26/37 (70%), Positives = 27/37 (72%)
Frame = -1 / -2
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TIDR LFPF *P T DLNHWAI NTR+S*TK Y
Sbjct: 263 TIDRSGSLLFPFC*PSTRLDLNHWAIQNTRQS*TK*Y 153
Score = 54.2 bits (112), Expect(2) = 2e-025
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 634 SQLIGVAVLCSHFGSQALSRI*TIGPSQTLGEAEQNGT 521
+QLIGVA+ SHF SQA I*TIG S+T G+AEQN T
Sbjct: 265 AQLIGVALFYSHFASQAQGWI*TIGQSKTRGKAEQNST 152
Score = 25.4 bits (49), Expect(3) = 2e-039
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +3 / +3
Query: 651 VCSLWSLSCG 680
VCSLW L CG
Sbjct: 300 VCSLWRLRCG 329
Score = 24.9 bits (48), Expect(3) = 3e-034
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1 / -2
Query: 680 TTAQTPERTYPQTHN 636
TT+QTP+RTY + +
Sbjct: 329 TTSQTPQRTYSNSQH 285
Score = 22.1 bits (42), Expect(3) = 2e-027
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 641 VFVGMFSLEFELW 679
V + MFS+ FE+W
Sbjct: 290 VSLSMFSVAFEMW 328
>gb|CF487354.1|CF487354 POL1_43_F12.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_43_F12_A002 3', mRNA sequence
Length = 515
Score = 163 bits (351), Expect = 3e-039
Identities = 65/127 (51%), Positives = 86/127 (67%)
Frame = +3 / +3
Query: 102 PIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVR 281
PIGP+ S WLY+ P G+Y + KEK+ NP + I ENG+DQ GN T L D R+
Sbjct: 3 PIGPRGYSDWLYVVPWGLYKAFIWTKEKFNNPVMLIGENGIDQSGNGTLPHALYDKFRID 182
Query: 282 FYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAY 461
+++ + +L+ AI GANV GYF WSLLDNFEW GY S+FGIV+VD +T R+PK SA
Sbjct: 183 YFQKSLQELQYAIRDGANVFGYFVWSLLDNFEWRFGYPSRFGIVHVDRSTFVRYPKDSAR 362
Query: 462 WFRDMLQ 482
WFR +++
Sbjct: 363 WFRKVIK 383
>gb|CF486029.1|CF486029 POL1_35_F05.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_35_F05_A002 3', mRNA sequence
Length = 526
Score = 162 bits (349), Expect = 5e-039
Identities = 63/124 (50%), Positives = 86/124 (69%)
Frame = +3 / +1
Query: 111 PQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYR 290
P+ S WLY+ P G+Y + + KEK+ NP + I ENG+DQ GN T L D R+ +++
Sbjct: 1 PRGYSDWLYVVPWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETLPHALYDKFRIDYFQ 180
Query: 291 SYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFR 470
Y+ +L+ AI GANV GYF WSLLDNFEW GY+S+FGIV+VD +T R+PK SA WFR
Sbjct: 181 KYLQELQYAIRDGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFR 360
Query: 471 DMLQ 482
+++
Sbjct: 361 KVIK 372
>gb|CW154736.1|CW154736 104_557_11145760_148_36357_064 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11145760, DNA
sequence
Length = 689
Score = 69.8 bits (146), Expect(3) = 1e-037
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3 / +1
Query: 417 VDFNTLERHPKASAYWFRDMLQKH*DL 497
VDFNTLERHPKASAYWFRDMLQKH*DL
Sbjct: 1 VDFNTLERHPKASAYWFRDMLQKH*DL 81
Score = 66.1 bits (138), Expect(3) = 1e-037
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2 / +2
Query: 524 TILFSFA*CLGWPNGSNPAQCLATKMGTKDSYPDQL 631
TILFSFA C G PNGSNPA CLA+KMG K+S+ D+L
Sbjct: 107 TILFSFASCFGLPNGSNPALCLASKMGVKESHSDEL 214
Score = 63.8 bits (133), Expect(3) = 4e-036
Identities = 28/38 (73%), Positives = 30/38 (78%)
Frame = -1 / -3
Query: 530 KWYLPCSGSALEISMLLKHVPEPVGRRLRVAFERVEVH 417
K LP ALEISMLLKHVPEPVGRRL V FER+EV+
Sbjct: 114 KIVLPSGSVALEISMLLKHVPEPVGRRLGVPFERIEVN 1
Score = 63.8 bits (133), Expect(3) = 4e-036
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = -1 / -2
Query: 719 LSISNTINQHDKITTAQTPERTYPQTHNI 633
LSISN INQHDKITT+QTP+RTY QTHNI
Sbjct: 322 LSISNKINQHDKITTSQTPQRTYSQTHNI 236
Score = 63.4 bits (132), Expect(3) = 4e-036
Identities = 27/37 (72%), Positives = 31/37 (83%)
Frame = -3 / -3
Query: 633 HN*SG*LSFVPILVARH*AGFEPLGHPKH*AKLNKMV 523
HN S LSF PIL+A+H AGFEPLG+PKH AKLNK+V
Sbjct: 216 HNSSEWLSFTPILLAKHKAGFEPLGNPKHEAKLNKIV 106
Score = 60.2 bits (125), Expect(3) = 1e-037
Identities = 23/39 (58%), Positives = 28/39 (71%)
Frame = +2 / +1
Query: 635 CCVFVGMFSLEFELWLFYRVG*SCLKCLIQDCDISSCFN 751
CC FV MFS+ FE+WLFYRV *S LKCL+++ FN
Sbjct: 238 CCEFVSMFSVAFEMWLFYRVD*SYLKCLVRNVTSRGFFN 354
Score = 59.3 bits (123), Expect(3) = 2e-028
Identities = 24/37 (64%), Positives = 27/37 (72%)
Frame = +3 / +3
Query: 522 VPFCSASPSVWDGPMVQIRLSAWLPKWEQRTATPINC 632
V FCSA P V D PMVQI+ AWL KWE + ATP+NC
Sbjct: 105 VLFCSALPRVLDCPMVQIQPCAWLAKWE*KRATPMNC 215
Score = 54.2 bits (112), Expect(3) = 2e-028
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +2 / +3
Query: 422 LQHARTPPEGVGLLVQGHASEALRSPEP 505
LQ+ART P+GVGLLVQGHASEALRS P
Sbjct: 6 LQYARTAPQGVGLLVQGHASEALRSLGP 89
Score = 53.8 bits (111), Expect(3) = 2e-026
Identities = 24/37 (64%), Positives = 25/37 (67%)
Frame = -1 / -1
Query: 632 TIDRGSCPLFPFW*PGTEPDLNHWAIPNTRRS*TKWY 522
TI R L PF *P T DLNHWAI NTR+S*TK Y
Sbjct: 215 TIHRSGSLLLPFC*PSTRLDLNHWAIQNTRQS*TK*Y 105
Score = 52.4 bits (108), Expect(3) = 2e-026
Identities = 26/40 (65%), Positives = 27/40 (67%)
Frame = -2 / -3
Query: 754 LVKTTRDVTVLN*AFQTRSTNTIK*PQLKLQREHTHKHTT 635
LVK V +*AFQ RS NTIK*P LK REHTHK TT
Sbjct: 357 LVKKPSRCHVPD*AFQIRSINTIK*PHLKRHREHTHKLTT 238
Score = 51.9 bits (107), Expect(3) = 2e-026
Identities = 24/26 (92%), Positives = 24/26 (92%)
Frame = -2 / -1
Query: 496 RSQCF*SMSLNQ*ADAFGWRSSVLKS 419
RSQCF*SMSLNQ*ADA G RSSVLKS
Sbjct: 80 RSQCF*SMSLNQ*ADALGCRSSVLKS 3
Score = 51.9 bits (107), Expect(3) = 2e-028
Identities = 25/41 (60%), Positives = 28/41 (68%)
Frame = +3 / +2
Query: 633 DVVCLWVCSLWSLSCGYFIVLVDRV*NA*FRTVTSRVVLTK 755
+VV L VCSLW L CGYFIVL+D +*NA* T LTK
Sbjct: 236 NVVSL*VCSLWRLRCGYFIVLIDLI*NA*SGT*HLEGFLTK 358
>gb|CN123998.1|CN123998 RHOH1_2_A09.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_2_A09_A002 3', mRNA sequence
Length = 799
Score = 95.9 bits (203), Expect(3) = 2e-037
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +3 / +3
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T DQ L D TRV +++ Y+ + +AI GA++ GYFAWS LDNFEW GY+ +FGIVYVD
Sbjct: 174 TLDQVLNDTTRVGYFKGYLNSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVD 353
Query: 423 F 425
+
Sbjct: 354 Y 356
Score = 68.0 bits (142), Expect(3) = 2e-037
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +3 / +3
Query: 93 NGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
+G+ IG +A S+WL+I P G+ +NY+ +KY NP IYITENGMD
Sbjct: 18 SGEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMD 152
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPKASA WF L+
Sbjct: 360 NGLSRHPKASALWFSRFLK 416
>gb|CN127628.1|CN127628 RHOH1_24_C12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_C12_A002 3', mRNA sequence
Length = 731
Score = 95.9 bits (203), Expect(3) = 2e-037
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +3 / +2
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T DQ L D TRV +++ Y+ + +AI GA++ GYFAWS LDNFEW GY+ +FGIVYVD
Sbjct: 221 TLDQVLNDTTRVGYFKGYLNSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVD 400
Query: 423 F 425
+
Sbjct: 401 Y 403
Score = 68.0 bits (142), Expect(3) = 2e-037
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +3 / +2
Query: 93 NGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
+G+ IG +A S+WL+I P G+ +NY+ +KY NP IYITENGMD
Sbjct: 65 SGEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMD 199
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPKASA WF L+
Sbjct: 407 NGLSRHPKASALWFSRFLK 463
>gb|BG049317.1|BG049317 OV1_18_D10.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 684
Score = 95.9 bits (203), Expect(3) = 2e-037
Identities = 34/61 (55%), Positives = 45/61 (73%)
Frame = +3 / +3
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T DQ L D TRV +++ Y+ + +AI GA++ GYFAWS LDNFEW GY+ +FGIVYVD
Sbjct: 186 TLDQVLNDTTRVGYFKGYLNSVAQAIKDGADIRGYFAWSFLDNFEWAMGYTKRFGIVYVD 365
Query: 423 F 425
+
Sbjct: 366 Y 368
Score = 68.0 bits (142), Expect(3) = 2e-037
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +3 / +3
Query: 93 NGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
+G+ IG +A S+WL+I P G+ +NY+ +KY NP IYITENGMD
Sbjct: 30 SGEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMD 164
Score = 31.8 bits (63), Expect(3) = 2e-037
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / +3
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPKASA WF L+
Sbjct: 372 NGLSRHPKASALWFSRFLK 428
>gb|CN129227.1|CN129227 RHOH1_34_E11.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_34_E11_A002 3', mRNA sequence
Length = 809
Score = 91.8 bits (194), Expect(3) = 3e-036
Identities = 33/61 (54%), Positives = 44/61 (72%)
Frame = +3 / +2
Query: 243 TRDQYLRDATRVRFYRSYIGQLKKAIDQGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVD 422
T DQ L D TRV +++ Y+ + +AI GA++ GYFAWS LDNFEW G + +FGIVYVD
Sbjct: 185 TLDQVLNDTTRVGYFKGYLNSVAQAIKDGADIRGYFAWSFLDNFEWAMGCTKRFGIVYVD 364
Query: 423 F 425
+
Sbjct: 365 Y 367
Score = 68.0 bits (142), Expect(3) = 3e-036
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = +3 / +2
Query: 93 NGKPIGPQANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMD 227
+G+ IG +A S+WL+I P G+ +NY+ +KY NP IYITENGMD
Sbjct: 29 SGEKIGERAASEWLFIVPWGLRKVLNYIVKKYNNPVIYITENGMD 163
Score = 31.8 bits (63), Expect(3) = 3e-036
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / +2
Query: 426 NTLERHPKASAYWFRDMLQ 482
N L RHPKASA WF L+
Sbjct: 371 NGLSRHPKASALWFSRFLK 427
>gb|CF481153.1|CF481153 POL1_70_G02.b1_A002 Pollen Sorghum bicolor cDNA clone
POL1_70_G02_A002 3', mRNA sequence
Length = 444
Score = 147 bits (315), Expect = 2e-034
Identities = 58/113 (51%), Positives = 79/113 (69%)
Frame = +3 / +1
Query: 144 PTGMYGCVNYLKEKYGNPTIYITENGMDQPGNLTRDQYLRDATRVRFYRSYIGQLKKAID 323
P G+Y + + KEK+ NP + I ENG+DQ GN T L D R+ +++ Y+ +L+ AI
Sbjct: 4 PWGLYKALIWTKEKFNNPVMLIGENGIDQSGNETLPHALYDKFRIDYFQKYLQELQYAIR 183
Query: 324 QGANVAGYFAWSLLDNFEWLAGYSSKFGIVYVDFNTLERHPKASAYWFRDMLQ 482
GANV GYF WSLLDNFEW GY+S+FGIV+VD +T R+PK SA WFR +++
Sbjct: 184 DGANVFGYFVWSLLDNFEWRLGYTSRFGIVHVDRSTFVRYPKDSARWFRKVIK 342
>gb|CL165781.1|CL165781 104_361_10808896_116_31821_112 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10808896, DNA
sequence
Length = 574
Score = 90.9 bits (192), Expect(3) = 3e-034
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = +3 / -3
Query: 117 ANSKWLYIAPTGMYGCVNYLKEKYGNPTIYITENGMDQ 230
ANS WLYI PTGMYGCVNYLKEKYGNPT+YITENG Q
Sbjct: 185 ANSNWLYIVPTGMYGCVNYLKEKYGNPTVYITENGTQQ 72
Score = 77.1 bits (162), Expect(3) = 6e-027
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = -2 / +1
Query: 223 IPFSVM*IVGFPYFSLR*FTHPYIPVGAM*SHLEFA 116
+PFSVM* VGFPYFSLR*FTHPYIPVG M*S LEFA
Sbjct: 79 VPFSVM*TVGFPYFSLR*FTHPYIPVGTM*SQLEFA 186
Score = 67.0 bits (140), Expect(3) = 2e-022
Identities = 26/39 (66%), Positives = 32/39 (82%)
Frame = -1 / +3
Query: 230 LVHSVLRYVDRWIPILLLEVVHAPVHPRRGDVEPLRIRL 114
L+ ++L VD WIPILLLEVVH +HPRR DV+P+RIRL
Sbjct: 72 LLSTILGNVDSWIPILLLEVVHTSIHPRRDDVKPIRIRL 188
Score = 65.2 bits (136), Expect(3) = 6e-024
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +2 / -2
Query: 116 GEF*VALHRPDGDVRVRELPQGEVWESNDLHNGE 217
GEF*+ALHRPDGDV + ELPQGEVWESN LH E
Sbjct: 186 GEF*LALHRPDGDVWMCELPQGEVWESNCLHYRE 85
Score = 60.6 bits (126), Expect(3) = 3e-034
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = +3 / -2
Query: 3 TSSYMKGQKLVQLAPSSYSADWQVQYV 83
TSSYMKGQKL+Q PSSYSADWQVQYV
Sbjct: 531 TSSYMKGQKLLQQTPSSYSADWQVQYV 451
Score = 57.9 bits (120), Expect(3) = 6e-027
Identities = 23/29 (79%), Positives = 26/29 (89%)
Frame = -2 / +2
Query: 88 AKTY*TCQSAE*LLGASWTSFCPFM*LDV 2
++TY TCQSAE*LLG W+SFCPFM*LDV
Sbjct: 446 SQTYWTCQSAE*LLGVCWSSFCPFM*LDV 532
Score = 54.2 bits (112), Expect(3) = 2e-022
Identities = 22/27 (81%), Positives = 24/27 (88%)
Frame = -1 / +1
Query: 83 NILNLPIGRVATGRQLDQLLPLHVAGC 3
NIL+LPIGRVATGR L+Q L LHVAGC
Sbjct: 451 NILDLPIGRVATGRLLEQFLSLHVAGC 531
Score = 53.3 bits (110), Expect(3) = 6e-024
Identities = 23/29 (79%), Positives = 25/29 (86%)
Frame = +1 / -3
Query: 1 THPAT*RGRSWSSWRPVATLPIGRFNMFL 87
THPAT*R R+ SS RPVATLPIGR NMF+
Sbjct: 533 THPAT*RDRNCSSRRPVATLPIGRSNMFV 447
Score = 35.9 bits (72), Expect(3) = 3e-034
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = +2 / -1
Query: 65 LAGSICFCTQWQTDWTTG 118
L+ C CTQWQT+WT G
Sbjct: 373 LSHKFCSCTQWQTNWTKG 320
Score = 31.3 bits (62), Expect(3) = 6e-024
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3 / -2
Query: 72 VQYVFARNGKPIGPQANSKWLY 137
+ V ARNGKPIGP+ S +Y
Sbjct: 366 INSVVARNGKPIGPKVCSSSIY 301
Score = 27.6 bits (54), Expect(3) = 6e-027
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -3 / +3
Query: 117 PVVQSVCHCVQ 85
P+VQ VCHCVQ
Sbjct: 321 PLVQLVCHCVQ 353
Score = 26.3 bits (51), Expect(3) = 2e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = -2 / +2
Query: 112 GPIGLPLRAKT 80
GPIGLPLRA T
Sbjct: 326 GPIGLPLRATT 358
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,101,430,462
Number of Sequences: 832831
Number of extensions: 18978525
Number of successful extensions: 214489
Number of sequences better than 1.0e-020: 258
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 25426127948
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)