TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805013.2.2
(964 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AW681129.1|AW681129 WS1_9_A12.b1_A002 Water-stressed 1 (... 384 e-105
gb|BE355359.1|BE355359 DG1_114_A04.b1_A002 Dark Grown 1 (DG... 384 e-105
gb|CD224035.1|CD224035 CCC1_31_A02.g1_A007 Callus culture/c... 384 e-105
gb|AW745346.1|AW745346 WS1_33_G08.b1_A002 Water-stressed 1 ... 380 e-104
gb|CD223928.1|CD223928 CCC1_31_A02.b1_A007 Callus culture/c... 363 e-101
gb|BE355440.1|BE355440 DG1_114_A04.b2_A002 Dark Grown 1 (DG... 350 2e-095
gb|BE125232.1|BE125232 DG1_16_A11.b1_A002 Dark Grown 1 (DG1... 331 1e-089
gb|BE125917.1|BE125917 DG1_59_E12.b1_A002 Dark Grown 1 (DG1... 302 7e-081
gb|CF759327.1|CF759327 DSAF1_43_G09.b1_A011 Drought-stresse... 297 2e-079
gb|AW679953.1|AW679953 WS1_33_A07.g1_A002 Water-stressed 1 ... 260 3e-072
gb|BE355521.1|BE355521 DG1_114_A04.g1_A002 Dark Grown 1 (DG... 255 3e-069
gb|AW679913.1|AW679913 WS1_33_G08.g1_A002 Water-stressed 1 ... 245 8e-068
gb|CW447469.1|CW447469 fsbb001f180j18f0 Sorghum methylation... 152 1e-067
gb|CW075941.1|CW075941 104_363_10809839_114_31800_287 Sorgh... 147 2e-055
gb|AW746704.1|AW746704 WS1_54_B05.g1_A002 Water-stressed 1 ... 193 4e-052
gb|AW746635.1|AW746635 WS1_54_B05.b1_A002 Water-stressed 1 ... 193 2e-050
gb|CW447470.1|CW447470 fsbb001f180j18k0 Sorghum methylation... 152 4e-047
gb|CW075942.1|CW075942 104_363_10809839_116_31801_287 Sorgh... 160 1e-046
gb|AW923785.1|AW923785 DG1_59_E12.g1_A002 Dark Grown 1 (DG1... 163 8e-041
gb|CW420516.1|CW420516 fsbb001f126n23k0 Sorghum methylation... 88 9e-024
gb|AW681134.1|AW681134 WS1_9_A12.g1_A002 Water-stressed 1 (... 68 4e-021
>gb|AW681129.1|AW681129 WS1_9_A12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 641
Score = 384 bits (832), Expect = e-105
Identities = 162/176 (92%), Positives = 165/176 (93%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 59 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 238
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 239 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 418
Query: 451 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 419 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 586
Score = 312 bits (675), Expect(3) = 1e-087
Identities = 141/160 (88%), Positives = 141/160 (88%)
Frame = -3 / -3
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 537 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 358
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 210
ILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM
Sbjct: 357 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 178
Query: 209 VSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
VSF LPSGRNSNSRNSCPNLPL PT*YRR*N
Sbjct: 177 VSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 58
Score = 250 bits (541), Expect = 2e-065
Identities = 106/141 (75%), Positives = 107/141 (75%)
Frame = +3 / +1
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 169 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 348
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLE 560
FQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL
Sbjct: 349 FQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 528
Query: 561 CFKREPCTMLR*C*ACDDAHG 623
F +R C*ACDDA G
Sbjct: 529 VF*ERILYHVRCC*ACDDALG 591
Score = 206 bits (445), Expect = 3e-052
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -2 / -2
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 589 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 410
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 409 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 248
Score = 116 bits (247), Expect(3) = 9e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 386 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 243
Score = 45.5 bits (93), Expect(3) = 9e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 524 KTVTRRLGMELKTGLA*S*SGG**VKT 444
Score = 29.5 bits (58), Expect(3) = 1e-087
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 560 LTWYKILS*NTHK 522
Score = 25.4 bits (49), Expect(3) = 9e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 556 HGTKFSLKTL 527
Score = 23.1 bits (44), Expect(3) = 1e-087
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 590 PSASSQAQQHL 558
>gb|BE355359.1|BE355359 DG1_114_A04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 609
Score = 384 bits (832), Expect = e-105
Identities = 162/176 (92%), Positives = 165/176 (93%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 39 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 218
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 219 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 398
Query: 451 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 399 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 566
Score = 312 bits (675), Expect(3) = 1e-087
Identities = 141/160 (88%), Positives = 141/160 (88%)
Frame = -3 / -3
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 517 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 338
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 210
ILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM
Sbjct: 337 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 158
Query: 209 VSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
VSF LPSGRNSNSRNSCPNLPL PT*YRR*N
Sbjct: 157 VSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 38
Score = 250 bits (541), Expect = 2e-065
Identities = 106/141 (75%), Positives = 107/141 (75%)
Frame = +3 / +2
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 149 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 328
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLE 560
FQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL
Sbjct: 329 FQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 508
Query: 561 CFKREPCTMLR*C*ACDDAHG 623
F +R C*ACDDA G
Sbjct: 509 VF*ERILYHVRCC*ACDDALG 571
Score = 206 bits (445), Expect = 3e-052
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -2 / -2
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 569 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 390
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 389 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 228
Score = 116 bits (247), Expect(3) = 9e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 366 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 223
Score = 45.5 bits (93), Expect(3) = 9e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 504 KTVTRRLGMELKTGLA*S*SGG**VKT 424
Score = 29.5 bits (58), Expect(3) = 1e-087
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 540 LTWYKILS*NTHK 502
Score = 25.4 bits (49), Expect(3) = 9e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 536 HGTKFSLKTL 507
Score = 23.1 bits (44), Expect(3) = 1e-087
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 570 PSASSQAQQHL 538
>gb|CD224035.1|CD224035 CCC1_31_A02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_A02_A007 5', mRNA sequence
Length = 651
Score = 384 bits (832), Expect = e-105
Identities = 162/176 (92%), Positives = 165/176 (93%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 110 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 289
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 290 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 469
Query: 451 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 470 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 637
Score = 312 bits (675), Expect(3) = 1e-087
Identities = 141/160 (88%), Positives = 141/160 (88%)
Frame = -3 / -1
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 588 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 409
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 210
ILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM
Sbjct: 408 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 229
Query: 209 VSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
VSF LPSGRNSNSRNSCPNLPL PT*YRR*N
Sbjct: 228 VSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 109
Score = 250 bits (541), Expect = 2e-065
Identities = 106/141 (75%), Positives = 107/141 (75%)
Frame = +3 / +1
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 220 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 399
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLE 560
FQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL
Sbjct: 400 FQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 579
Query: 561 CFKREPCTMLR*C*ACDDAHG 623
F +R C*ACDDA G
Sbjct: 580 VF*ERILYHVRCC*ACDDALG 642
Score = 206 bits (445), Expect = 3e-052
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -2 / -3
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 640 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 461
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 460 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 299
Score = 116 bits (247), Expect(3) = 8e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -2
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 437 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 294
Score = 45.5 bits (93), Expect(3) = 8e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -2
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 575 KTVTRRLGMELKTGLA*S*SGG**VKT 495
Score = 29.5 bits (58), Expect(3) = 1e-087
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 611 LTWYKILS*NTHK 573
Score = 25.4 bits (49), Expect(3) = 8e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 607 HGTKFSLKTL 578
Score = 23.1 bits (44), Expect(3) = 1e-087
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 641 PSASSQAQQHL 609
>gb|AW745346.1|AW745346 WS1_33_G08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 601
Score = 380 bits (825), Expect = e-104
Identities = 161/176 (91%), Positives = 164/176 (93%)
Frame = +1 / +1
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVF SPSVLREARRII
Sbjct: 46 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFGSPSVLREARRII 225
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 226 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 405
Query: 451 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 406 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 573
Score = 309 bits (669), Expect(3) = 8e-087
Identities = 140/160 (87%), Positives = 140/160 (87%)
Frame = -3 / -3
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 524 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 345
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 210
ILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMISDSWMILLASRRTEGE KTSLRIM
Sbjct: 344 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGEPKTSLRIM 165
Query: 209 VSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YRR*N 90
VSF LPSGRNSNSRNSCPNLPL PT*YRR*N
Sbjct: 164 VSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 45
Score = 250 bits (541), Expect = 2e-065
Identities = 106/141 (75%), Positives = 107/141 (75%)
Frame = +3 / +3
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 156 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 335
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLE 560
FQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL
Sbjct: 336 FQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 515
Query: 561 CFKREPCTMLR*C*ACDDAHG 623
F +R C*ACDDA G
Sbjct: 516 VF*ERILYHVRCC*ACDDALG 578
Score = 206 bits (445), Expect = 3e-052
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -2 / -2
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 576 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 397
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 396 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 235
Score = 116 bits (247), Expect(3) = 9e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 373 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 230
Score = 45.5 bits (93), Expect(3) = 9e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 511 KTVTRRLGMELKTGLA*S*SGG**VKT 431
Score = 29.5 bits (58), Expect(3) = 8e-087
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 547 LTWYKILS*NTHK 509
Score = 25.4 bits (49), Expect(3) = 9e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 543 HGTKFSLKTL 514
Score = 23.1 bits (44), Expect(3) = 8e-087
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 577 PSASSQAQQHL 545
>gb|CD223928.1|CD223928 CCC1_31_A02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_A02_A007 3', mRNA sequence
Length = 608
Score = 363 bits (786), Expect(2) = e-101
Identities = 154/168 (91%), Positives = 157/168 (93%)
Frame = +1 / +2
Query: 115 HKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKE 294
HKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKE
Sbjct: 2 HKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKE 181
Query: 295 DDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCF 474
DDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCF
Sbjct: 182 DDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCF 361
Query: 475 VFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
VFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 362 VFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 505
Score = 297 bits (642), Expect(4) = 6e-086
Identities = 133/151 (88%), Positives = 133/151 (88%)
Frame = -3 / -3
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 456 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 277
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 210
ILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM
Sbjct: 276 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIM 97
Query: 209 VSFXXXXXXXXXXLPSGRNSNSRNSCPNLPL 117
VSF LPSGRNSNSRNSCPNLPL
Sbjct: 96 VSFL*LELLA*RSLPSGRNSNSRNSCPNLPL 4
Score = 250 bits (541), Expect(2) = 4e-067
Identities = 106/141 (75%), Positives = 107/141 (75%)
Frame = +3 / +1
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 88 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 267
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLE 560
FQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL
Sbjct: 268 FQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 447
Query: 561 CFKREPCTMLR*C*ACDDAHG 623
F +R C*ACDDA G
Sbjct: 448 VF*ERILYHVRCC*ACDDALG 510
Score = 206 bits (445), Expect(2) = 2e-053
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -2 / -2
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 508 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 329
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 328 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 167
Score = 116 bits (247), Expect(3) = 9e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 305 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 162
Score = 45.5 bits (93), Expect(3) = 9e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 443 KTVTRRLGMELKTGLA*S*SGG**VKT 363
Score = 29.5 bits (58), Expect(4) = 6e-086
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 479 LTWYKILS*NTHK 441
Score = 28.1 bits (55), Expect(4) = 6e-086
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / -2
Query: 701 RHKYTTLTTARSLHNPTAK 645
RHKY SLHNP AK
Sbjct: 598 RHKYYNSLLLSSLHNPNAK 542
Score = 27.2 bits (53), Expect(2) = e-101
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1 / +3
Query: 646 FAVGLCKLRAVVSVVYLCL 702
FA GLCKL + + YLCL
Sbjct: 543 FAFGLCKLLSSSEL*YLCL 599
Score = 26.3 bits (51), Expect(2) = 4e-067
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3 / +2
Query: 645 FCGWIVQTASSSECGIFVPSVS 710
FC WIVQTA IF+P S
Sbjct: 542 FCIWIVQTAE*Q*VVIFMPFFS 607
Score = 25.4 bits (49), Expect(3) = 9e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 475 HGTKFSLKTL 446
Score = 24.9 bits (48), Expect(2) = 2e-053
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -1 / -3
Query: 703 EGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
+G NI AVCTIQ Q P +P
Sbjct: 600 KGINITTHCYSAVCTIQMQKVPLPPSVP 517
Score = 23.1 bits (44), Expect(4) = 6e-086
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 509 PSASSQAQQHL 477
>gb|BE355440.1|BE355440 DG1_114_A04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 350 bits (758), Expect = 2e-095
Identities = 145/145 (100%), Positives = 145/145 (100%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 39 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 218
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 219 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 398
Query: 451 LVQDLKCFVFSLINLHFKIKPIQS* 525
LVQDLKCFVFSLINLHFKIKPIQS*
Sbjct: 399 LVQDLKCFVFSLINLHFKIKPIQS* 473
Score = 300 bits (650), Expect = 2e-080
Identities = 133/146 (91%), Positives = 133/146 (91%)
Frame = -3 / -1
Query: 527 AQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMT 348
AQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREPILEVVNEMCSLPMT
Sbjct: 475 AQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMT 296
Query: 347 ISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXL 168
ISSS RPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSF L
Sbjct: 295 ISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSL 116
Query: 167 PSGRNSNSRNSCPNLPLCPT*YRR*N 90
PSGRNSNSRNSCPNLPL PT*YRR*N
Sbjct: 115 PSGRNSNSRNSCPNLPL*PT*YRR*N 38
Score = 222 bits (480), Expect = 5e-057
Identities = 89/109 (81%), Positives = 89/109 (81%)
Frame = +3 / +2
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 149 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 328
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQDQANPVLS 527
FQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQDQANPVLS
Sbjct: 329 FQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQDQANPVLS 475
Score = 171 bits (368), Expect = 1e-041
Identities = 74/82 (90%), Positives = 78/82 (95%)
Frame = -2 / -3
Query: 525 SRLDWLDLEVEVDE*KHEALQILDEVVEDPESLRVLAGLDIDEGADLGSGE*NVFVAHDD 346
SRLDWLDLEVEVDE*KH+ LQILDEVVEDPE+LRVLAGLDIDEGADLGSGE*NV VAHDD
Sbjct: 473 SRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGADLGSGE*NVLVAHDD 294
Query: 345 LELLSADAVGLRPVAVVLLHDI 280
LELL+ADAVG PVA+VLLHDI
Sbjct: 293 LELLAADAVGFGPVAIVLLHDI 228
Score = 116 bits (247), Expect(2) = 6e-029
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -2
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 366 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 223
Score = 33.1 bits (66), Expect(2) = 6e-029
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = -1 / -2
Query: 526 LKTGLA*S*SGG**VKT 476
LKTGLA*S*SGG**VKT
Sbjct: 474 LKTGLA*S*SGG**VKT 424
>gb|BE125232.1|BE125232 DG1_16_A11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 331 bits (717), Expect = 1e-089
Identities = 136/136 (100%), Positives = 136/136 (100%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 95 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 274
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 275 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 454
Query: 451 LVQDLKCFVFSLINLH 498
LVQDLKCFVFSLINLH
Sbjct: 455 LVQDLKCFVFSLINLH 502
Score = 276 bits (597), Expect = 4e-073
Identities = 123/136 (90%), Positives = 123/136 (90%)
Frame = -3 / -3
Query: 497 WRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSSCRPMRS 318
WRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREPILEVVNEMCSLPMTISSS RPMRS
Sbjct: 501 WRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRS 322
Query: 317 GSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRNSNSRN 138
GSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSF LPSGRNSNSRN
Sbjct: 321 GSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRN 142
Query: 137 SCPNLPLCPT*YRR*N 90
SCPNLPL PT*YRR*N
Sbjct: 141 SCPNLPL*PT*YRR*N 94
Score = 200 bits (431), Expect = 3e-050
Identities = 79/99 (79%), Positives = 79/99 (79%)
Frame = +3 / +1
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 205 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 384
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPP 497
FQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPP
Sbjct: 385 FQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPP 501
Score = 149 bits (319), Expect = 8e-035
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = -2 / -2
Query: 498 VEVDE*KHEALQILDEVVEDPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAV 319
VEVDE*KH+ LQILDEVVEDPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAV
Sbjct: 502 VEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAV 323
Query: 318 GLRPVAVVLLHDI 280
G PVA+VLLHDI
Sbjct: 322 GFGPVAIVLLHDI 284
Score = 116 bits (247), Expect = 7e-025
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 422 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 279
>gb|BE125917.1|BE125917 DG1_59_E12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 302 bits (653), Expect = 7e-081
Identities = 124/124 (100%), Positives = 124/124 (100%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 120 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 299
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 300 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 479
Query: 451 LVQD 462
LVQD
Sbjct: 480 LVQD 491
Score = 244 bits (528), Expect = 1e-063
Identities = 111/124 (89%), Positives = 111/124 (89%)
Frame = -3 / -3
Query: 461 SWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMI 282
SWTR**KIR PSGSLLDWTSTREPILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMI
Sbjct: 490 SWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMI 311
Query: 281 SDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*Y 102
SDSWMILLASRRTEGETKTSLRIMVSF LPSGRNSNSRNSCPNLPL PT*Y
Sbjct: 310 SDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*Y 131
Query: 101 RR*N 90
RR*N
Sbjct: 130 RR*N 119
Score = 176 bits (379), Expect = 4e-043
Identities = 69/87 (79%), Positives = 69/87 (79%)
Frame = +3 / +2
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 230 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 409
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRPG 461
FQDRLPRRCPVQQGPGG PDLLLPRPG
Sbjct: 410 FQDRLPRRCPVQQGPGGPPDLLLPRPG 490
Score = 127 bits (271), Expect = 3e-028
Identities = 55/61 (90%), Positives = 58/61 (95%)
Frame = -2 / -2
Query: 462 ILDEVVEDPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHD 283
ILDEVVEDPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHD
Sbjct: 491 ILDEVVEDPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHD 312
Query: 282 I 280
I
Sbjct: 311 I 309
Score = 116 bits (247), Expect = 7e-025
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 447 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 304
>gb|CF759327.1|CF759327 DSAF1_43_G09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_43_G09_A011 5', mRNA sequence
Length = 388
Score = 297 bits (642), Expect = 2e-079
Identities = 122/122 (100%), Positives = 122/122 (100%)
Frame = +1 / +3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 21 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 200
Query: 271 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 450
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 201 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 380
Query: 451 LV 456
LV
Sbjct: 381 LV 386
Score = 243 bits (524), Expect = 4e-063
Identities = 110/123 (89%), Positives = 110/123 (89%)
Frame = -3 / -1
Query: 458 WTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMIS 279
WTR**KIR PSGSLLDWTSTREPILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMIS
Sbjct: 388 WTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMIS 209
Query: 278 DSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*YR 99
DSWMILLASRRTEGETKTSLRIMVSF LPSGRNSNSRNSCPNLPL PT*YR
Sbjct: 208 DSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*YR 29
Query: 98 R*N 90
R*N
Sbjct: 28 R*N 20
Score = 173 bits (373), Expect = 3e-042
Identities = 68/86 (79%), Positives = 68/86 (79%)
Frame = +3 / +2
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHH 380
ERHHDPQ QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHH
Sbjct: 131 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHH 310
Query: 381 FQDRLPRRCPVQQGPGGTPDLLLPRP 458
FQDRLPRRCPVQQGPGG PDLLLPRP
Sbjct: 311 FQDRLPRRCPVQQGPGGPPDLLLPRP 388
Score = 123 bits (263), Expect = 4e-027
Identities = 53/59 (89%), Positives = 56/59 (94%)
Frame = -2 / -3
Query: 456 DEVVEDPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DEVVEDPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 386 DEVVEDPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 210
Score = 116 bits (247), Expect = 7e-025
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -2
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 348 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 205
>gb|AW679953.1|AW679953 WS1_33_A07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 612
Score = 260 bits (563), Expect(3) = 3e-072
Identities = 113/127 (88%), Positives = 116/127 (91%)
Frame = +1 / +1
Query: 238 PSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSS 417
PSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSS
Sbjct: 1 PSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSS 180
Query: 418 KDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DD 597
KDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D
Sbjct: 181 KDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DA 360
Query: 598 VELVTMR 618
VELVTMR
Sbjct: 361 VELVTMR 381
Score = 237 bits (512), Expect(2) = 6e-063
Identities = 99/122 (81%), Positives = 100/122 (81%)
Frame = +3 / +3
Query: 258 QEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHHFQDRLPRRCPVQQGPGGTP 437
QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHHFQDRLPRRCPVQQGPGG P
Sbjct: 21 QEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHHFQDRLPRRCPVQQGPGGPP 200
Query: 438 DLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLECFKREPCTMLR*C*ACDDA 617
DLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL F +R C*ACDDA
Sbjct: 201 DLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL*VF*ERILYHVRCC*ACDDA 380
Query: 618 HG 623
G
Sbjct: 381 LG 386
Score = 232 bits (501), Expect(6) = 1e-070
Identities = 102/110 (92%), Positives = 102/110 (92%)
Frame = -3 / -2
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 332 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 153
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRRTE 240
ILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMISDSWMILLASRRTE
Sbjct: 152 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTE 3
Score = 206 bits (445), Expect(2) = 2e-054
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -2 / -1
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 384 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 205
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 204 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 43
Score = 116 bits (247), Expect(4) = 6e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -3
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 181 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 38
Score = 45.5 bits (93), Expect(4) = 6e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -3
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 319 KTVTRRLGMELKTGLA*S*SGG**VKT 239
Score = 30.4 bits (60), Expect(6) = 1e-070
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1 / -2
Query: 724 HSTQQETEGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
H TQ +G NI AVCTIQ Q P +P
Sbjct: 497 HPTQN*KKGINITTHCYSAVCTIQMQKVPLPPSVP 393
Score = 29.5 bits (58), Expect(6) = 1e-070
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 355 LTWYKILS*NTHK 317
Score = 28.6 bits (56), Expect(3) = 3e-072
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 646 FAVGLCKLRAVVSVVYLCLQF 708
FA GLCKL + + YLCL F
Sbjct: 419 FAFGLCKLLSSSEL*YLCLFF 481
Score = 28.1 bits (55), Expect(2) = 2e-054
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / -1
Query: 701 RHKYTTLTTARSLHNPTAK 645
RHKY SLHNP AK
Sbjct: 474 RHKYYNSLLLSSLHNPNAK 418
Score = 25.8 bits (50), Expect(2) = 6e-063
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 645 FCGWIVQTASSSECGIFVP 701
FC WIVQTA IF+P
Sbjct: 418 FCIWIVQTAE*Q*VVIFMP 474
Score = 25.4 bits (49), Expect(4) = 6e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 351 HGTKFSLKTL 322
Score = 24.0 bits (46), Expect(3) = 3e-072
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 750 SILLCYQRSVEG 785
+ILLCYQ S EG
Sbjct: 519 TILLCYQCSAEG 554
Score = 23.5 bits (45), Expect(6) = 1e-070
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2 / -2
Query: 819 PQVPDNLGIHSILQ 778
P P+NLGIH +L+
Sbjct: 602 PGKPNNLGIHPLLR 561
Score = 23.1 bits (44), Expect(6) = 1e-070
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 385 PSASSQAQQHL 353
Score = 23.1 bits (44), Expect(6) = 1e-070
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 785 SFNRALITEKNTS 747
SF+ ALITEKN++
Sbjct: 554 SFSGALITEKNSA 516
Score = 21.7 bits (41), Expect(4) = 6e-035
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -3
Query: 796 YPFHPSTER**QRRIL 749
Y PS E **QRRI+
Sbjct: 565 YDVPPSAEH**QRRIV 518
>gb|BE355521.1|BE355521 DG1_114_A04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 255 bits (552), Expect(2) = 3e-069
Identities = 111/125 (88%), Positives = 114/125 (91%)
Frame = +1 / +1
Query: 244 VLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD 423
VLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
Sbjct: 1 VLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD 180
Query: 424 PEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVE 603
PEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VE
Sbjct: 181 PEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVE 360
Query: 604 LVTMR 618
LVTMR
Sbjct: 361 LVTMR 375
Score = 237 bits (512), Expect(2) = 6e-063
Identities = 99/122 (81%), Positives = 100/122 (81%)
Frame = +3 / +3
Query: 258 QEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHHFQDRLPRRCPVQQGPGGTP 437
QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHHFQDRLPRRCPVQQGPGG P
Sbjct: 15 QEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHHFQDRLPRRCPVQQGPGGPP 194
Query: 438 DLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLECFKREPCTMLR*C*ACDDA 617
DLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL F +R C*ACDDA
Sbjct: 195 DLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL*VF*ERILYHVRCC*ACDDA 374
Query: 618 HG 623
G
Sbjct: 375 LG 380
Score = 227 bits (491), Expect(4) = 4e-066
Identities = 100/108 (92%), Positives = 100/108 (92%)
Frame = -3 / -3
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 326 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 147
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLASRR 246
ILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFMISDSWMILLASRR
Sbjct: 146 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRR 3
Score = 206 bits (445), Expect(2) = 2e-054
Identities = 92/114 (80%), Positives = 97/114 (85%)
Frame = -2 / -2
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 378 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 199
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHDI
Sbjct: 198 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDI 37
Score = 116 bits (247), Expect(3) = 9e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -1
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 175 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 32
Score = 45.5 bits (93), Expect(3) = 9e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -1
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 313 KTVTRRLGMELKTGLA*S*SGG**VKT 233
Score = 30.4 bits (60), Expect(4) = 4e-066
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1 / -3
Query: 724 HSTQQETEGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
H TQ +G NI AVCTIQ Q P +P
Sbjct: 491 HPTQN*KKGINITTHCYSAVCTIQMQKVPLPPSVP 387
Score = 29.5 bits (58), Expect(4) = 4e-066
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -1
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 349 LTWYKILS*NTHK 311
Score = 28.6 bits (56), Expect(2) = 3e-069
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 646 FAVGLCKLRAVVSVVYLCLQF 708
FA GLCKL + + YLCL F
Sbjct: 413 FAFGLCKLLSSSEL*YLCLFF 475
Score = 28.1 bits (55), Expect(2) = 2e-054
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / -2
Query: 701 RHKYTTLTTARSLHNPTAK 645
RHKY SLHNP AK
Sbjct: 468 RHKYYNSLLLSSLHNPNAK 412
Score = 25.8 bits (50), Expect(2) = 6e-063
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 645 FCGWIVQTASSSECGIFVP 701
FC WIVQTA IF+P
Sbjct: 412 FCIWIVQTAE*Q*VVIFMP 468
Score = 25.4 bits (49), Expect(3) = 9e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 345 HGTKFSLKTL 316
Score = 23.1 bits (44), Expect(4) = 4e-066
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -1
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 379 PSASSQAQQHL 347
>gb|AW679913.1|AW679913 WS1_33_G08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 582
Score = 245 bits (530), Expect(3) = 8e-068
Identities = 107/122 (87%), Positives = 110/122 (90%)
Frame = +1 / +2
Query: 253 EARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEG 432
EARRIIQESDIMKE DSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEG
Sbjct: 2 EARRIIQESDIMKEVDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEG 181
Query: 433 LRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVT 612
LRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VELVT
Sbjct: 182 LRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVT 361
Query: 613 MR 618
MR
Sbjct: 362 MR 367
Score = 237 bits (512), Expect(2) = 6e-063
Identities = 99/122 (81%), Positives = 100/122 (81%)
Frame = +3 / +1
Query: 258 QEDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHHFQDRLPRRCPVQQGPGGTP 437
QEDHPGVRYHEGGR QLA RPHRP GARDRHGQR HFIHHFQDRLPRRCPVQQGPGG P
Sbjct: 7 QEDHPGVRYHEGGR*QLARTRPHRPPGARDRHGQRAHFIHHFQDRLPRRCPVQQGPGGPP 186
Query: 438 DLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISSLHATVLECFKREPCTMLR*C*ACDDA 617
DLLLPRPGSEV VFTHQPPLQDQANPVLSSI SL TVL F +R C*ACDDA
Sbjct: 187 DLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL*VF*ERILYHVRCC*ACDDA 366
Query: 618 HG 623
G
Sbjct: 367 LG 372
Score = 221 bits (478), Expect(6) = 3e-067
Identities = 97/106 (91%), Positives = 98/106 (92%)
Frame = -3 / -1
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 318 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 139
Query: 389 ILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFMISDSWMILLAS 252
ILEVVNEMCSLPMTISSS RPMRSGSGQLLS+SFMISDSWMILLAS
Sbjct: 138 ILEVVNEMCSLPMTISSSWRPMRSGSGQLLSTSFMISDSWMILLAS 1
Score = 203 bits (438), Expect(2) = 2e-053
Identities = 91/114 (79%), Positives = 96/114 (84%)
Frame = -2 / -3
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 370 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 191
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+ LLHDI
Sbjct: 190 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIDLLHDI 29
Score = 116 bits (247), Expect(4) = 5e-035
Identities = 43/48 (89%), Positives = 44/48 (91%)
Frame = -1 / -2
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS*YRT
Sbjct: 167 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*YRT 24
Score = 45.5 bits (93), Expect(4) = 5e-035
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -2
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 305 KTVTRRLGMELKTGLA*S*SGG**VKT 225
Score = 30.4 bits (60), Expect(6) = 3e-067
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1 / -1
Query: 724 HSTQQETEGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
H TQ +G NI AVCTIQ Q P +P
Sbjct: 483 HPTQN*KKGINITTHCYSAVCTIQMQKVPLPPSVP 379
Score = 29.5 bits (58), Expect(6) = 3e-067
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 341 LTWYKILS*NTHK 303
Score = 28.6 bits (56), Expect(3) = 8e-068
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +3
Query: 646 FAVGLCKLRAVVSVVYLCLQF 708
FA GLCKL + + YLCL F
Sbjct: 405 FAFGLCKLLSSSEL*YLCLFF 467
Score = 28.1 bits (55), Expect(2) = 2e-053
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / -3
Query: 701 RHKYTTLTTARSLHNPTAK 645
RHKY SLHNP AK
Sbjct: 460 RHKYYNSLLLSSLHNPNAK 404
Score = 25.8 bits (50), Expect(2) = 6e-063
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 645 FCGWIVQTASSSECGIFVP 701
FC WIVQTA IF+P
Sbjct: 404 FCIWIVQTAE*Q*VVIFMP 460
Score = 25.4 bits (49), Expect(4) = 5e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 337 HGTKFSLKTL 308
Score = 24.0 bits (46), Expect(3) = 8e-068
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +1
Query: 750 SILLCYQRSVEG 785
+ILLCYQ S EG
Sbjct: 505 TILLCYQCSAEG 540
Score = 23.1 bits (44), Expect(6) = 3e-067
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 371 PSASSQAQQHL 339
Score = 23.1 bits (44), Expect(6) = 3e-067
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 785 SFNRALITEKNTS 747
SF+ ALITEKN++
Sbjct: 540 SFSGALITEKNSA 502
Score = 22.1 bits (42), Expect(6) = 3e-067
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2 / -1
Query: 810 PDNLGIHSILQ 778
P+NLGIH +L+
Sbjct: 579 PNNLGIHPLLR 547
Score = 21.7 bits (41), Expect(4) = 5e-035
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -2
Query: 796 YPFHPSTER**QRRIL 749
Y PS E **QRRI+
Sbjct: 551 YDVPPSAEH**QRRIV 504
>gb|CW447469.1|CW447469 fsbb001f180j18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f180j18, DNA
sequence
Length = 714
Score = 152 bits (327), Expect(2) = 1e-067
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +1 / -3
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVS S LREARRII
Sbjct: 673 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSRSALREARRII 494
Query: 271 QESDI 285
Q+SD+
Sbjct: 493 QQSDV 479
Score = 128 bits (274), Expect(2) = 1e-067
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +1 / -2
Query: 277 SDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV 456
S IM+EDD NWPEP+ IGRQELEIVMGNEHISFTTSKIGSLVDV S+DP+GLRIFYYLV
Sbjct: 350 SQIMREDDRNWPEPNYIGRQELEIVMGNEHISFTTSKIGSLVDVVGSRDPDGLRIFYYLV 171
Query: 457 Q 459
Q
Sbjct: 170 Q 168
Score = 111 bits (236), Expect = 2e-023
Identities = 49/73 (67%), Positives = 58/73 (79%)
Frame = -3 / +1
Query: 464 RSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFM 285
++WT+**K+R PSGSLL TSTR+PILEVVNEMCSLP+TISSSC PM GSGQ LSSS +
Sbjct: 163 KTWTK**KMRRPSGSLLPTTSTRDPILEVVNEMCSLPITISSSCLPM*LGSGQFLSSSLI 342
Query: 284 ISDSWMILLASRR 246
I D + S+R
Sbjct: 343 ICDGCQAINQSKR 381
Score = 107 bits (228), Expect = 3e-022
Identities = 51/79 (64%), Positives = 55/79 (69%)
Frame = -3 / +3
Query: 326 MRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRNSN 147
+R+ S + + SD WMILLASRR E ET TSLRIMVSF LPSGRNSN
Sbjct: 438 LRTESTRSTRRGELTSDCWMILLASRRAERETNTSLRIMVSFL*LELLAYRSLPSGRNSN 617
Query: 146 SRNSCPNLPLCPT*YRR*N 90
SRNS PNLPLCPT*YRR*N
Sbjct: 618 SRNSWPNLPLCPT*YRR*N 674
>gb|CW075941.1|CW075941 104_363_10809839_114_31800_287 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809839, DNA
sequence
Length = 705
Score = 147 bits (315), Expect(2) = 2e-055
Identities = 57/68 (83%), Positives = 58/68 (85%)
Frame = +3 / -3
Query: 261 EDHPGVRYHEGGRQQLA*ARPHRPTGARDRHGQRTHFIHHFQDRLPRRCPVQQGPGGTPD 440
+ HP V HEGGR QLA RPHRP GARDRHGQR HFIHHFQDRLPRRCPVQQGPGG PD
Sbjct: 460 DPHPPVADHEGGR*QLARTRPHRPPGARDRHGQRAHFIHHFQDRLPRRCPVQQGPGGPPD 281
Query: 441 LLLPRPGS 464
LLLPRPGS
Sbjct: 280 LLLPRPGS 257
Score = 145 bits (311), Expect(2) = 4e-038
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / -1
Query: 277 SDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV 456
S IMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV
Sbjct: 444 SQIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV 265
Query: 457 Q 459
Q
Sbjct: 264 Q 262
Score = 136 bits (292), Expect = 4e-031
Identities = 61/73 (83%), Positives = 64/73 (87%)
Frame = -3 / +2
Query: 464 RSWTR**KIRSPSGSLLDWTSTREPILEVVNEMCSLPMTISSSCRPMRSGSGQLLSSSFM 285
R+WTR**KIR PSGSLLDWTSTREPILEVVNEMCSLPMTISSS RPMRSGSGQLLSSSFM
Sbjct: 257 RTWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFM 436
Query: 284 ISDSWMILLASRR 246
I D + + S R
Sbjct: 437 ICDGGVGVNQSNR 475
Score = 124 bits (265), Expect(2) = 1e-039
Identities = 53/60 (88%), Positives = 57/60 (95%)
Frame = -2 / +1
Query: 459 LDEVVEDPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADAVGLRPVAVVLLHDI 280
LDEVVEDPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADAVG PVA+VLLHD+
Sbjct: 262 LDEVVEDPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADAVGFGPVAIVLLHDL 441
Score = 109 bits (232), Expect = 8e-023
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -1 / +3
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRCGRAQASCCRPPS*YRT 275
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRCGR +ASC RPPS* T
Sbjct: 303 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRCGRVRASCYRPPS*SAT 446
Score = 93.6 bits (198), Expect(2) = 2e-055
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1 / -3
Query: 166 GKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDI 285
GKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESD+
Sbjct: 703 GKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDV 584
Score = 63.4 bits (132), Expect(2) = 1e-039
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3 / +3
Query: 281 SDSWMILLASRRTEGETKTSLRIMVSF 201
SDSWMILLASRRTEGETKTSLRIMVSF
Sbjct: 588 SDSWMILLASRRTEGETKTSLRIMVSF 668
Score = 37.3 bits (75), Expect(2) = 4e-038
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +3 / -2
Query: 201 ERHHDPQXXXXXXXXXXXXQEDHPGVR 281
ERHHDPQ QEDHPGVR
Sbjct: 668 ERHHDPQGGLRLPLRPPRGQEDHPGVR 588
>gb|AW746704.1|AW746704 WS1_54_B05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 513
Score = 193 bits (415), Expect(3) = 4e-052
Identities = 85/99 (85%), Positives = 88/99 (88%)
Frame = +1 / +1
Query: 322 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 501
RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF
Sbjct: 1 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 180
Query: 502 KIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
KIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 181 KIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 297
Score = 191 bits (412), Expect(3) = 2e-049
Identities = 80/100 (80%), Positives = 81/100 (81%)
Frame = +3 / +3
Query: 324 HRPTGARDRHGQRTHFIHHFQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQ 503
HRP GARDRHGQR HFIHHFQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQ
Sbjct: 3 HRPPGARDRHGQRAHFIHHFQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQ 182
Query: 504 DQANPVLSSISSLHATVLECFKREPCTMLR*C*ACDDAHG 623
DQANPVLSSI SL TVL F +R C*ACDDA G
Sbjct: 183 DQANPVLSSIPSLRVTVL*VF*ERILYHVRCC*ACDDALG 302
Score = 181 bits (389), Expect(3) = 6e-047
Identities = 81/100 (81%), Positives = 85/100 (85%)
Frame = -2 / -1
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 300 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 121
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADA 322
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADA
Sbjct: 120 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADA 1
Score = 170 bits (366), Expect(6) = 6e-052
Identities = 74/82 (90%), Positives = 74/82 (90%)
Frame = -3 / -2
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 248 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 69
Query: 389 ILEVVNEMCSLPMTISSSCRPM 324
ILEVVNEMCSLPMTISSS RPM
Sbjct: 68 ILEVVNEMCSLPMTISSSWRPM 3
Score = 84.9 bits (179), Expect(3) = 1e-025
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / -3
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRC 323
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRC
Sbjct: 97 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRC 2
Score = 45.5 bits (93), Expect(3) = 1e-025
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -3
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 235 KTVTRRLGMELKTGLA*S*SGG**VKT 155
Score = 30.4 bits (60), Expect(6) = 6e-052
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1 / -2
Query: 724 HSTQQETEGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
H TQ +G NI AVCTIQ Q P +P
Sbjct: 413 HPTQN*KKGINITTHCYSAVCTIQMQKVPLPPSVP 309
Score = 29.5 bits (58), Expect(6) = 6e-052
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 271 LTWYKILS*NTHK 233
Score = 28.6 bits (56), Expect(3) = 4e-052
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 646 FAVGLCKLRAVVSVVYLCLQF 708
FA GLCKL + + YLCL F
Sbjct: 335 FAFGLCKLLSSSEL*YLCLFF 397
Score = 28.1 bits (55), Expect(3) = 6e-047
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / -1
Query: 701 RHKYTTLTTARSLHNPTAK 645
RHKY SLHNP AK
Sbjct: 390 RHKYYNSLLLSSLHNPNAK 334
Score = 25.8 bits (50), Expect(3) = 2e-049
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 645 FCGWIVQTASSSECGIFVP 701
FC WIVQTA IF+P
Sbjct: 334 FCIWIVQTAE*Q*VVIFMP 390
Score = 25.4 bits (49), Expect(3) = 1e-025
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 267 HGTKFSLKTL 238
Score = 24.0 bits (46), Expect(3) = 4e-052
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / +3
Query: 750 SILLCYQRSVEG 785
+ILLCYQ S EG
Sbjct: 435 TILLCYQCSAEG 470
Score = 23.1 bits (44), Expect(6) = 6e-052
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 301 PSASSQAQQHL 269
Score = 23.1 bits (44), Expect(6) = 6e-052
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3 / -2
Query: 785 SFNRALITEKNTS 747
SF+ ALITEKN++
Sbjct: 470 SFSGALITEKNSA 432
Score = 22.1 bits (42), Expect(6) = 6e-052
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -2 / -2
Query: 810 PDNLGIHSILQ 778
P+NLGIH +L+
Sbjct: 509 PNNLGIHPLLR 477
Score = 21.7 bits (41), Expect(3) = 2e-049
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = +1 / +1
Query: 751 VFFSVISALLKD 786
+FFSVISA LK+
Sbjct: 436 LFFSVISAPLKE 471
Score = 21.7 bits (41), Expect(3) = 6e-047
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / -3
Query: 796 YPFHPSTER**QRRIL 749
Y PS E **QRRI+
Sbjct: 481 YDVPPSAEH**QRRIV 434
>gb|AW746635.1|AW746635 WS1_54_B05.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 459
Score = 193 bits (415), Expect(2) = 2e-050
Identities = 85/99 (85%), Positives = 88/99 (88%)
Frame = +1 / +1
Query: 322 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 501
RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF
Sbjct: 1 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 180
Query: 502 KIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
KIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 181 KIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 297
Score = 191 bits (412), Expect(2) = 3e-049
Identities = 80/100 (80%), Positives = 81/100 (81%)
Frame = +3 / +3
Query: 324 HRPTGARDRHGQRTHFIHHFQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQ 503
HRP GARDRHGQR HFIHHFQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQ
Sbjct: 3 HRPPGARDRHGQRAHFIHHFQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQ 182
Query: 504 DQANPVLSSISSLHATVLECFKREPCTMLR*C*ACDDAHG 623
DQANPVLSSI SL TVL F +R C*ACDDA G
Sbjct: 183 DQANPVLSSIPSLRVTVL*VF*ERILYHVRCC*ACDDALG 302
Score = 181 bits (389), Expect(2) = 8e-047
Identities = 81/100 (81%), Positives = 85/100 (85%)
Frame = -2 / -1
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 300 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 121
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NVFVAHDDLELLSADA 322
DPE+LRVLAGLDIDEGADLGSGE*NV VAHDDLELL+ADA
Sbjct: 120 DPEALRVLAGLDIDEGADLGSGE*NVLVAHDDLELLAADA 1
Score = 170 bits (366), Expect(4) = 2e-048
Identities = 74/82 (90%), Positives = 74/82 (90%)
Frame = -3 / -2
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 248 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 69
Query: 389 ILEVVNEMCSLPMTISSSCRPM 324
ILEVVNEMCSLPMTISSS RPM
Sbjct: 68 ILEVVNEMCSLPMTISSSWRPM 3
Score = 84.9 bits (179), Expect(3) = 1e-025
Identities = 30/32 (93%), Positives = 30/32 (93%)
Frame = -1 / -3
Query: 418 CWTGHRRGSRSWKW*MKCVRCP*RSRAPVGRC 323
CWTGHRRGSRSWKW*MKC RCP*RSRAP GRC
Sbjct: 97 CWTGHRRGSRSWKW*MKCARCP*RSRAPGGRC 2
Score = 45.5 bits (93), Expect(3) = 1e-025
Identities = 24/27 (88%), Positives = 24/27 (88%)
Frame = -1 / -3
Query: 556 KTVA*RLEMELKTGLA*S*SGG**VKT 476
KTV RL MELKTGLA*S*SGG**VKT
Sbjct: 235 KTVTRRLGMELKTGLA*S*SGG**VKT 155
Score = 30.4 bits (60), Expect(4) = 2e-048
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1 / -2
Query: 724 HSTQQETEGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
H TQ +G NI AVCTIQ Q P +P
Sbjct: 413 HPTQN*KKGINITTHCYSAVCTIQMQKVPLPPSVP 309
Score = 29.5 bits (58), Expect(4) = 2e-048
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 271 LTWYKILS*NTHK 233
Score = 28.6 bits (56), Expect(2) = 2e-050
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / +2
Query: 646 FAVGLCKLRAVVSVVYLCLQF 708
FA GLCKL + + YLCL F
Sbjct: 335 FAFGLCKLLSSSEL*YLCLFF 397
Score = 28.1 bits (55), Expect(2) = 8e-047
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / -1
Query: 701 RHKYTTLTTARSLHNPTAK 645
RHKY SLHNP AK
Sbjct: 390 RHKYYNSLLLSSLHNPNAK 334
Score = 25.8 bits (50), Expect(2) = 3e-049
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 645 FCGWIVQTASSSECGIFVP 701
FC WIVQTA IF+P
Sbjct: 334 FCIWIVQTAE*Q*VVIFMP 390
Score = 25.4 bits (49), Expect(3) = 1e-025
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 587 HGTRFSLKTL 558
HGT+FSLKTL
Sbjct: 267 HGTKFSLKTL 238
Score = 23.1 bits (44), Expect(4) = 2e-048
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 301 PSASSQAQQHL 269
>gb|CW447470.1|CW447470 fsbb001f180j18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f180j18, DNA
sequence
Length = 715
Score = 152 bits (327), Expect(2) = 4e-047
Identities = 61/65 (93%), Positives = 63/65 (96%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVS S LREARRII
Sbjct: 308 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSRSALREARRII 487
Query: 271 QESDI 285
Q+SD+
Sbjct: 488 QQSDV 502
Score = 105 bits (225), Expect = 8e-022
Identities = 51/79 (64%), Positives = 55/79 (69%)
Frame = -3 / -2
Query: 326 MRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRNSN 147
+R+ S + + SD WMILLASRR E ET TSLRIMVSF LPSGRNSN
Sbjct: 543 LRTESTRSTRRGELTSDCWMILLASRRAERETNTSLRIMVSFL*LELLA*RSLPSGRNSN 364
Query: 146 SRNSCPNLPLCPT*YRR*N 90
SRNS PNLPLCPT*YRR*N
Sbjct: 363 SRNSWPNLPLCPT*YRR*N 307
Score = 60.2 bits (125), Expect(2) = 4e-047
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1 / +1
Query: 277 SDIMKEDDSNWPEPDRIGRQELEIVMGN 360
S IM+EDD NWPEP+ IGRQELEIVMGN
Sbjct: 631 SQIMREDDRNWPEPNYIGRQELEIVMGN 714
>gb|CW075942.1|CW075942 104_363_10809839_116_31801_287 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809839, DNA
sequence
Length = 681
Score = 160 bits (343), Expect(2) = 1e-046
Identities = 64/65 (98%), Positives = 65/65 (100%)
Frame = +1 / +2
Query: 91 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 270
FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 287 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 466
Query: 271 QESDI 285
QESD+
Sbjct: 467 QESDV 481
Score = 114 bits (244), Expect(2) = 2e-030
Identities = 53/64 (82%), Positives = 53/64 (82%)
Frame = -3 / -1
Query: 281 SDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRNSNSRNSCPNLPLCPT*Y 102
SDSWMILLASRRTEGETKTSLRIMVSF LPSGRNSNSRNSCPNLPL PT*Y
Sbjct: 477 SDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*Y 298
Query: 101 RR*N 90
RR*N
Sbjct: 297 RR*N 286
Score = 51.0 bits (105), Expect(2) = 1e-046
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 277 SDIMKEDDSNWPEPDRIGRQ 336
S IMKEDDSNWPEPDRIGRQ
Sbjct: 621 SHIMKEDDSNWPEPDRIGRQ 680
Score = 42.3 bits (86), Expect(2) = 2e-030
Identities = 16/21 (76%), Positives = 17/21 (80%)
Frame = -1 / -1
Query: 337 PVGRCGRAQASCCRPPS*YRT 275
P GRCGR +ASC RPPS*Y T
Sbjct: 681 PGGRCGRVRASCYRPPS*YAT 619
>gb|AW923785.1|AW923785 DG1_59_E12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 350
Score = 163 bits (351), Expect(2) = 4e-040
Identities = 72/86 (83%), Positives = 75/86 (87%)
Frame = +1 / +3
Query: 361 EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQA 540
EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQA
Sbjct: 3 EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQA 182
Query: 541 FMRLFWSVLRENLVPC*DDVELVTMR 618
F+ LF+ + *D VELVTMR
Sbjct: 183 FV*LFYECFKREFCTM*DAVELVTMR 260
Score = 162 bits (348), Expect(2) = 2e-039
Identities = 69/88 (78%), Positives = 70/88 (79%)
Frame = +3 / +2
Query: 360 RTHFIHHFQDRLPRRCPVQQGPGGTPDLLLPRPGSEVLRVFTHQPPLQDQANPVLSSISS 539
R HFIHHFQDRLPRRCPVQQGPGG PDLLLPRPGSEV VFTHQPPLQDQANPVLSSI S
Sbjct: 2 RAHFIHHFQDRLPRRCPVQQGPGGPPDLLLPRPGSEVFCVFTHQPPLQDQANPVLSSIPS 181
Query: 540 LHATVLECFKREPCTMLR*C*ACDDAHG 623
L TVL F +R C*ACDDA G
Sbjct: 182 LRVTVL*VF*ERILYHVRCC*ACDDALG 265
Score = 153 bits (329), Expect(2) = 8e-037
Identities = 69/86 (80%), Positives = 72/86 (83%)
Frame = -2 / -1
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQILDEVVE 442
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQILDEVVE
Sbjct: 263 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVE 84
Query: 441 DPESLRVLAGLDIDEGADLGSGE*NV 364
DPE+LRVLAGLDIDEGADLGSGE*NV
Sbjct: 83 DPEALRVLAGLDIDEGADLGSGE*NV 6
Score = 146 bits (314), Expect(4) = 8e-041
Identities = 63/70 (90%), Positives = 63/70 (90%)
Frame = -3 / -2
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRSWTR**KIRSPSGSLLDWTSTREP 390
LK NS KA DGAQDWIGLILKWRLMSENTKHFRSWTR**KIR PSGSLLDWTSTREP
Sbjct: 211 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREP 32
Query: 389 ILEVVNEMCS 360
ILEVVNEMCS
Sbjct: 31 ILEVVNEMCS 2
Score = 29.5 bits (58), Expect(4) = 8e-041
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 234 LTWYKILS*NTHK 196
Score = 25.8 bits (50), Expect(4) = 8e-041
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -3 / -1
Query: 698 HKYTTLTTARSLHNPTAK 645
HKY SLHNP AK
Sbjct: 350 HKYYNSLLLSSLHNPNAK 297
Score = 23.1 bits (44), Expect(2) = 4e-040
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3 / +3
Query: 645 FCGWIVQTA 671
FC WIVQTA
Sbjct: 297 FCIWIVQTA 323
Score = 23.1 bits (44), Expect(4) = 8e-041
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -3
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 264 PSASSQAQQHL 232
Score = 22.1 bits (42), Expect(2) = 2e-039
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / +2
Query: 647 LRLDCANC 670
L LDCANC
Sbjct: 299 LHLDCANC 322
Score = 22.1 bits (42), Expect(2) = 8e-037
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1 / -2
Query: 694 NIPHSLLLAVCTIQPQXXXKVPLLP 620
NI AVCTIQ Q P +P
Sbjct: 346 NITTHCYSAVCTIQMQKVPLPPSVP 272
>gb|CW420516.1|CW420516 fsbb001f126n23k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f126n23, DNA
sequence
Length = 796
Score = 87.7 bits (185), Expect(3) = 5e-021
Identities = 39/53 (73%), Positives = 42/53 (79%)
Frame = +1 / -3
Query: 460 DLKCFVFSLINLHFKIKPIQS*APSQAFMRLFWSVLRENLVPC*DDVELVTMR 618
DLKCFVFSLINLHFKIKPIQS*APSQAF+ LF+ + *D VELVTMR
Sbjct: 794 DLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYECFKREFCTM*DAVELVTMR 636
Score = 84.5 bits (178), Expect(4) = 9e-024
Identities = 38/54 (70%), Positives = 40/54 (74%)
Frame = -2 / +3
Query: 621 RAHRHKLNIILTWYKVLS*NTPKQSHEGLRWSSRLDWLDLEVEVDE*KHEALQI 460
+AHRHKLN IL K KQ HEGL WSSRLDWLDLEVEVDE*KH+ LQI
Sbjct: 633 QAHRHKLNSILHGTKFSLKTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQI 794
Score = 72.1 bits (151), Expect(6) = 5e-022
Identities = 31/37 (83%), Positives = 31/37 (83%)
Frame = -3 / +1
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHFRS 459
LK NS KA DGAQDWIGLILKWRLMSENTKHFRS
Sbjct: 685 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHFRS 795
Score = 30.4 bits (60), Expect(4) = 9e-024
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1 / +1
Query: 724 HSTQQETEGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
H TQ +G NI AVCTIQ Q P +P
Sbjct: 520 HPTQN*KKGINITTHCYSAVCTIQMQKVPLPPSVP 624
Score = 29.5 bits (58), Expect(6) = 5e-022
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 662 LTWYKILS*NTHK 700
Score = 28.6 bits (56), Expect(4) = 9e-024
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1 / +3
Query: 847 ILVTGWICITTSPRQSGYPFHPS 779
++ GWI I T PR++ HPS
Sbjct: 378 VMAIGWIWINTIPRKTKQSGHPS 446
Score = 28.6 bits (56), Expect(3) = 5e-021
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1 / -1
Query: 646 FAVGLCKLRAVVSVVYLCLQF 708
FA GLCKL + + YLCL F
Sbjct: 598 FAFGLCKLLSSSEL*YLCLFF 536
Score = 28.1 bits (55), Expect(6) = 5e-022
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3 / +3
Query: 701 RHKYTTLTTARSLHNPTAK 645
RHKY SLHNP AK
Sbjct: 543 RHKYYNSLLLSSLHNPNAK 599
Score = 24.0 bits (46), Expect(3) = 5e-021
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +3 / -2
Query: 750 SILLCYQRSVEG 785
+ILLCYQ S EG
Sbjct: 498 TILLCYQCSAEG 463
Score = 23.5 bits (45), Expect(6) = 5e-022
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -2 / +1
Query: 819 PQVPDNLGIHSILQ 778
P P+NLGIH +L+
Sbjct: 415 PGKPNNLGIHPLLR 456
Score = 23.1 bits (44), Expect(6) = 5e-022
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / +2
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 632 PSASSQAQQHL 664
Score = 23.1 bits (44), Expect(4) = 9e-024
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3 / +1
Query: 785 SFNRALITEKNTS 747
SF+ ALITEKN++
Sbjct: 463 SFSGALITEKNSA 501
Score = 21.7 bits (41), Expect(6) = 5e-022
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -1 / +2
Query: 796 YPFHPSTER**QRRIL 749
Y PS E **QRRI+
Sbjct: 452 YDVPPSAEH**QRRIV 499
>gb|AW681134.1|AW681134 WS1_9_A12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 371
Score = 68.0 bits (142), Expect(5) = 4e-021
Identities = 29/35 (82%), Positives = 29/35 (82%)
Frame = -3 / -1
Query: 569 LKTLQNSRMKA*DGAQDWIGLILKWRLMSENTKHF 465
LK NS KA DGAQDWIGLILKWRLMSENTKHF
Sbjct: 107 LKHS*NSYTKAWDGAQDWIGLILKWRLMSENTKHF 3
Score = 30.4 bits (60), Expect(5) = 4e-021
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = -1 / -1
Query: 724 HSTQQETEGTNIPHSLLLAVCTIQPQXXXKVPLLP 620
H TQ +G NI AVCTIQ Q P +P
Sbjct: 272 HPTQN*KKGINITTHCYSAVCTIQMQKVPLPPSVP 168
Score = 29.5 bits (58), Expect(5) = 4e-021
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 591 LTWYKVLS*NTPK 553
LTWYK+LS*NT K
Sbjct: 130 LTWYKILS*NTHK 92
Score = 23.1 bits (44), Expect(5) = 4e-021
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = -1 / -2
Query: 622 PCASSQAQHHL 590
P ASSQAQ HL
Sbjct: 160 PSASSQAQQHL 128
Score = 23.1 bits (44), Expect(5) = 4e-021
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -3 / -1
Query: 785 SFNRALITEKNTS 747
SF+ ALITEKN++
Sbjct: 329 SFSGALITEKNSA 291
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 1,018,000,949
Number of Sequences: 832831
Number of extensions: 15256607
Number of successful extensions: 123646
Number of sequences better than 1.0e-020: 23
length of database: 163,786,556
effective HSP length: 55
effective length of database: 117,980,851
effective search space used: 31264925515
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)