TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1805013.2.1
(712 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BE355359.1|BE355359 DG1_114_A04.b1_A002 Dark Grown 1 (DG... 364 e-101
gb|AW681129.1|AW681129 WS1_9_A12.b1_A002 Water-stressed 1 (... 364 e-101
gb|CD224035.1|CD224035 CCC1_31_A02.g1_A007 Callus culture/c... 364 e-100
gb|AW745346.1|AW745346 WS1_33_G08.b1_A002 Water-stressed 1 ... 361 6e-099
gb|CD223928.1|CD223928 CCC1_31_A02.b1_A007 Callus culture/c... 343 1e-098
gb|BE355440.1|BE355440 DG1_114_A04.b2_A002 Dark Grown 1 (DG... 347 1e-094
gb|BE125232.1|BE125232 DG1_16_A11.b1_A002 Dark Grown 1 (DG1... 328 5e-089
gb|BE125917.1|BE125917 DG1_59_E12.b1_A002 Dark Grown 1 (DG1... 299 3e-080
gb|CF759327.1|CF759327 DSAF1_43_G09.b1_A011 Drought-stresse... 294 1e-078
gb|AW679953.1|AW679953 WS1_33_A07.g1_A002 Water-stressed 1 ... 244 5e-069
gb|BE355521.1|BE355521 DG1_114_A04.g1_A002 Dark Grown 1 (DG... 239 1e-067
gb|CW447469.1|CW447469 fsbb001f180j18f0 Sorghum methylation... 149 5e-067
gb|AW679913.1|AW679913 WS1_33_G08.g1_A002 Water-stressed 1 ... 230 1e-064
gb|CW075941.1|CW075941 104_363_10809839_114_31800_287 Sorgh... 145 3e-055
gb|AW746704.1|AW746704 WS1_54_B05.g1_A002 Water-stressed 1 ... 180 6e-049
gb|AW746635.1|AW746635 WS1_54_B05.b1_A002 Water-stressed 1 ... 180 6e-049
gb|CW447470.1|CW447470 fsbb001f180j18k0 Sorghum methylation... 149 1e-046
gb|CW075942.1|CW075942 104_363_10809839_116_31801_287 Sorgh... 157 4e-046
gb|AW923785.1|AW923785 DG1_59_E12.g1_A002 Dark Grown 1 (DG1... 150 3e-040
>gb|BE355359.1|BE355359 DG1_114_A04.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 609
Score = 364 bits (790), Expect(2) = e-101
Identities = 153/157 (97%), Positives = 154/157 (98%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 39 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 218
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 219 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 398
Query: 433 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFM*LVCE 543
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 399 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYE 509
Score = 313 bits (677), Expect(2) = 4e-085
Identities = 138/154 (89%), Positives = 140/154 (90%)
Frame = -3 / -3
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 499 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 320
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXX 174
EMCSLPMTISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRRTEGETKTSLRIMVSF
Sbjct: 319 EMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*L 140
Query: 173 XXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
LPSGR+SNSRNSCPNLPL PT* RR*N
Sbjct: 139 ELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 38
Score = 139 bits (298), Expect(2) = 9e-036
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -2
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 515 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 336
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 335 LGSGE*N 315
Score = 87.7 bits (185), Expect(5) = 7e-037
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +2
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 149 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 256
Score = 56.5 bits (117), Expect(5) = 7e-037
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +2
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 410 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 508
Score = 36.8 bits (74), Expect(5) = 7e-037
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 305 QRAHFIHHFQDRL 343
Score = 32.2 bits (64), Expect(2) = 9e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 231 EDGGRDEDLLADH 193
EDGG DEDLLADH
Sbjct: 197 EDGGGDEDLLADH 159
Score = 26.7 bits (52), Expect(2) = e-101
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 563 ALGXVWNTGWEWN 601
Score = 24.4 bits (47), Expect(5) = 7e-037
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 38 VLPAVLRGSQG 70
Score = 23.5 bits (45), Expect(2) = 4e-085
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1 / -3
Query: 649 VPLPLSAPHRADR 611
VPLP S PH A R
Sbjct: 601 VPLPPSVPHXAKR 563
Score = 22.6 bits (43), Expect(5) = 7e-037
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3 / +3
Query: 618 ALCGALSGSGT 650
A CG L GSGT
Sbjct: 570 AXCGTLGGSGT 602
>gb|AW681129.1|AW681129 WS1_9_A12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA, mRNA
sequence
Length = 641
Score = 364 bits (790), Expect(2) = e-101
Identities = 153/157 (97%), Positives = 154/157 (98%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 59 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 238
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 239 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 418
Query: 433 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFM*LVCE 543
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 419 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYE 529
Score = 313 bits (677), Expect(2) = 1e-085
Identities = 138/154 (89%), Positives = 140/154 (90%)
Frame = -3 / -3
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 519 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 340
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXX 174
EMCSLPMTISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRRTEGETKTSLRIMVSF
Sbjct: 339 EMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*L 160
Query: 173 XXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
LPSGR+SNSRNSCPNLPL PT* RR*N
Sbjct: 159 ELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 58
Score = 139 bits (298), Expect(3) = 4e-036
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -2
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 535 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 356
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 355 LGSGE*N 335
Score = 87.7 bits (185), Expect(5) = 2e-037
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +1
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 169 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 276
Score = 56.5 bits (117), Expect(5) = 2e-037
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +1
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 430 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 528
Score = 36.8 bits (74), Expect(5) = 2e-037
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 325 QRAHFIHHFQDRL 363
Score = 32.2 bits (64), Expect(3) = 4e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 231 EDGGRDEDLLADH 193
EDGG DEDLLADH
Sbjct: 217 EDGGGDEDLLADH 179
Score = 25.8 bits (50), Expect(2) = e-101
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 583 ALGFVWNTAWEWN 621
Score = 25.4 bits (49), Expect(2) = 1e-085
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 621 VPLPRSVPHKAKR 583
Score = 24.4 bits (47), Expect(5) = 2e-037
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 618 ALCGALSGSGT 650
ALCG L GSGT
Sbjct: 590 ALCGTLRGSGT 622
Score = 24.4 bits (47), Expect(5) = 2e-037
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 58 VLPAVLRGSQG 90
Score = 21.7 bits (41), Expect(3) = 4e-036
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 622 GSTPTQCSTQSQ 587
>gb|CD224035.1|CD224035 CCC1_31_A02.g1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_A02_A007 5', mRNA sequence
Length = 651
Score = 364 bits (790), Expect = e-100
Identities = 153/157 (97%), Positives = 154/157 (98%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 110 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 289
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 290 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 469
Query: 433 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFM*LVCE 543
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 470 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYE 580
Score = 313 bits (677), Expect(2) = 2e-086
Identities = 138/154 (89%), Positives = 140/154 (90%)
Frame = -3 / -1
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 570 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 391
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXX 174
EMCSLPMTISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRRTEGETKTSLRIMVSF
Sbjct: 390 EMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*L 211
Query: 173 XXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
LPSGR+SNSRNSCPNLPL PT* RR*N
Sbjct: 210 ELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 109
Score = 139 bits (298), Expect(2) = 9e-036
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -3
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 586 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 407
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 406 LGSGE*N 386
Score = 87.7 bits (185), Expect(4) = 3e-035
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +1
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 220 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 327
Score = 56.5 bits (117), Expect(4) = 3e-035
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +1
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 481 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 579
Score = 36.8 bits (74), Expect(4) = 3e-035
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 376 QRAHFIHHFQDRL 414
Score = 32.2 bits (64), Expect(2) = 9e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 231 EDGGRDEDLLADH 193
EDGG DEDLLADH
Sbjct: 268 EDGGGDEDLLADH 230
Score = 27.6 bits (54), Expect(2) = 2e-086
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 33 GRRHRFPFFF 4
GRRHRFPF F
Sbjct: 76 GRRHRFPFLF 47
Score = 24.4 bits (47), Expect(4) = 3e-035
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 109 VLPAVLRGSQG 141
>gb|AW745346.1|AW745346 WS1_33_G08.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 601
Score = 361 bits (783), Expect = 6e-099
Identities = 152/157 (96%), Positives = 153/157 (97%)
Frame = +1 / +1
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVF SPSVLREARRII
Sbjct: 46 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFGSPSVLREARRII 225
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 226 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 405
Query: 433 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFM*LVCE 543
LVQDLKCFVFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 406 LVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYE 516
Score = 310 bits (671), Expect = 2e-083
Identities = 137/154 (88%), Positives = 139/154 (90%)
Frame = -3 / -3
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 506 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 327
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXX 174
EMCSLPMTISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRRTEGE KTSLRIMVSF
Sbjct: 326 EMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGEPKTSLRIMVSFL*L 147
Query: 173 XXXXXXXLPSGRSSNSRNSCPNLPLCPT**RR*N 72
LPSGR+SNSRNSCPNLPL PT* RR*N
Sbjct: 146 ELLA*RSLPSGRNSNSRNSCPNLPL*PT*YRR*N 45
Score = 139 bits (298), Expect(2) = 1e-034
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -2
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 522 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 343
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 342 LGSGE*N 322
Score = 87.7 bits (185), Expect(4) = 3e-035
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +3
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 156 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 263
Score = 56.5 bits (117), Expect(4) = 3e-035
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +3
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 417 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 515
Score = 36.8 bits (74), Expect(4) = 3e-035
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +3
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 312 QRAHFIHHFQDRL 350
Score = 28.6 bits (56), Expect(2) = 1e-034
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 231 EDGGRDEDLLADH 193
EDGG EDLLADH
Sbjct: 204 EDGGGAEDLLADH 166
Score = 24.4 bits (47), Expect(4) = 3e-035
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +3
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 45 VLPAVLRGSQG 77
>gb|CD223928.1|CD223928 CCC1_31_A02.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_31_A02_A007 3', mRNA sequence
Length = 608
Score = 343 bits (744), Expect(3) = 1e-098
Identities = 145/149 (97%), Positives = 146/149 (97%)
Frame = +1 / +2
Query: 97 HKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKE 276
HKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKE
Sbjct: 2 HKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKE 181
Query: 277 DDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCF 456
DDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCF
Sbjct: 182 DDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCF 361
Query: 457 VFSLINLHFKIKPIQS*APSQAFM*LVCE 543
VFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 362 VFSLINLHFKIKPIQS*APSQAFV*LFYE 448
Score = 303 bits (655), Expect(3) = 2e-085
Identities = 131/145 (90%), Positives = 133/145 (91%)
Frame = -3 / -3
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 438 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 259
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXX 174
EMCSLPMTISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRRTEGETKTSLRIMVSF
Sbjct: 258 EMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*L 79
Query: 173 XXXXXXXLPSGRSSNSRNSCPNLPL 99
LPSGR+SNSRNSCPNLPL
Sbjct: 78 ELLA*RSLPSGRNSNSRNSCPNLPL 4
Score = 139 bits (298), Expect(4) = 2e-039
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -2
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 454 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 275
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 274 LGSGE*N 254
Score = 87.7 bits (185), Expect(5) = 5e-038
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +1
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 88 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 195
Score = 56.5 bits (117), Expect(5) = 5e-038
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +1
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 349 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 447
Score = 36.8 bits (74), Expect(5) = 5e-038
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 244 QRAHFIHHFQDRL 282
Score = 32.2 bits (64), Expect(4) = 2e-039
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 231 EDGGRDEDLLADH 193
EDGG DEDLLADH
Sbjct: 136 EDGGGDEDLLADH 98
Score = 31.8 bits (63), Expect(3) = 1e-098
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 652 PFAFVLCKLLSSSE 693
PFAF LCKLLSSSE
Sbjct: 540 PFAFGLCKLLSSSE 581
Score = 29.0 bits (57), Expect(3) = 2e-085
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 692 SLLLSSLHKTNAKGGS 645
SLLLSSLH NAKG +
Sbjct: 580 SLLLSSLHNPNAKGST 533
Score = 28.6 bits (56), Expect(4) = 2e-039
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 699 ITFTTTQQFAQNKCK 655
+ T TQQFAQ+KCK
Sbjct: 587 LQLTATQQFAQSKCK 543
Score = 26.3 bits (51), Expect(5) = 5e-038
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 656 LHLFCANC*VVVN 694
LHL CANC*V V+
Sbjct: 544 LHLDCANC*VAVS 582
Score = 25.8 bits (50), Expect(3) = 1e-098
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 502 ALGFVWNTGWEWN 540
Score = 24.9 bits (48), Expect(5) = 5e-038
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 618 ALCGALSGSGT 650
ALCG L GSGT
Sbjct: 509 ALCGTLGGSGT 541
Score = 24.9 bits (48), Expect(3) = 2e-085
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 540 VPLPPSVPHKAKR 502
Score = 21.7 bits (41), Expect(4) = 2e-039
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 541 GSTPTQCSTQSQ 506
>gb|BE355440.1|BE355440 DG1_114_A04.b2_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 475
Score = 347 bits (752), Expect = 1e-094
Identities = 144/145 (99%), Positives = 144/145 (99%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 39 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 218
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 219 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 398
Query: 433 LVQDLKCFVFSLINLHFKIKPIQS* 507
LVQDLKCFVFSLINLHFKIKPIQS*
Sbjct: 399 LVQDLKCFVFSLINLHFKIKPIQS* 473
Score = 293 bits (635), Expect = 1e-078
Identities = 131/146 (89%), Positives = 133/146 (91%)
Frame = -3 / -1
Query: 509 AQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMT 330
AQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMT
Sbjct: 475 AQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMT 296
Query: 329 ISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXL 150
ISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRRTEGETKTSLRIMVSF L
Sbjct: 295 ISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSL 116
Query: 149 PSGRSSNSRNSCPNLPLCPT**RR*N 72
PSGR+SNSRNSCPNLPL PT* RR*N
Sbjct: 115 PSGRNSNSRNSCPNLPL*PT*YRR*N 38
Score = 112 bits (239), Expect(2) = 1e-027
Identities = 48/53 (90%), Positives = 52/53 (98%)
Frame = -2 / -3
Query: 507 SRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGADLGSGE*N 349
SRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGADLGSGE*N
Sbjct: 473 SRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGADLGSGE*N 315
Score = 87.7 bits (185), Expect(4) = 2e-031
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +2
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 149 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 256
Score = 43.2 bits (88), Expect(4) = 2e-031
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3 / +2
Query: 444 SEVFRVLAHQPSLQDQANPVLS 509
SEVF V HQP LQDQANPVLS
Sbjct: 410 SEVFCVFTHQPPLQDQANPVLS 475
Score = 36.8 bits (74), Expect(4) = 2e-031
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 305 QRAHFIHHFQDRL 343
Score = 32.2 bits (64), Expect(2) = 1e-027
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 231 EDGGRDEDLLADH 193
EDGG DEDLLADH
Sbjct: 197 EDGGGDEDLLADH 159
Score = 24.4 bits (47), Expect(4) = 2e-031
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 38 VLPAVLRGSQG 70
>gb|BE125232.1|BE125232 DG1_16_A11.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 503
Score = 328 bits (711), Expect = 5e-089
Identities = 135/136 (99%), Positives = 135/136 (99%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 95 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 274
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 275 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 454
Query: 433 LVQDLKCFVFSLINLH 480
LVQDLKCFVFSLINLH
Sbjct: 455 LVQDLKCFVFSLINLH 502
Score = 271 bits (586), Expect(2) = 8e-074
Identities = 121/135 (89%), Positives = 123/135 (91%)
Frame = -3 / -3
Query: 476 RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSG 297
RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSG
Sbjct: 498 RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSG 319
Query: 296 SGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNS 117
SGQLLSSSFM+SDSWMILLASRRTEGETKTSLRIMVSF LPSGR+SNSRNS
Sbjct: 318 SGQLLSSSFMISDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRNS 139
Query: 116 CPNLPLCPT**RR*N 72
CPNLPL PT* RR*N
Sbjct: 138 CPNLPL*PT*YRR*N 94
Score = 90.0 bits (190), Expect(2) = 5e-021
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = -2 / -2
Query: 480 VKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGADLGSGE*N 349
V+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGADLGSGE*N
Sbjct: 502 VEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGADLGSGE*N 371
Score = 87.7 bits (185), Expect(3) = 9e-024
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +1
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 205 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 312
Score = 36.8 bits (74), Expect(3) = 9e-024
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 361 QRAHFIHHFQDRL 399
Score = 32.2 bits (64), Expect(2) = 5e-021
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / -2
Query: 231 EDGGRDEDLLADH 193
EDGG DEDLLADH
Sbjct: 253 EDGGGDEDLLADH 215
Score = 27.6 bits (54), Expect(2) = 8e-074
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 33 GRRHRFPFFF 4
GRRHRFPF F
Sbjct: 61 GRRHRFPFLF 32
Score = 24.4 bits (47), Expect(3) = 9e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +1
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 94 VLPAVLRGSQG 126
>gb|BE125917.1|BE125917 DG1_59_E12.b1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 492
Score = 299 bits (647), Expect = 3e-080
Identities = 123/124 (99%), Positives = 123/124 (99%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 120 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 299
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 300 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 479
Query: 433 LVQD 444
LVQD
Sbjct: 480 LVQD 491
Score = 244 bits (528), Expect(2) = 7e-066
Identities = 110/124 (88%), Positives = 112/124 (90%)
Frame = -3 / -3
Query: 443 SWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMM 264
SWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFM+
Sbjct: 490 SWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMI 311
Query: 263 SDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCPNLPLCPT** 84
SDSWMILLASRRTEGETKTSLRIMVSF LPSGR+SNSRNSCPNLPL PT*
Sbjct: 310 SDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*Y 131
Query: 83 RR*N 72
RR*N
Sbjct: 130 RR*N 119
Score = 87.7 bits (185), Expect(3) = 9e-024
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +2
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 230 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 337
Score = 36.8 bits (74), Expect(3) = 9e-024
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 386 QRAHFIHHFQDRL 424
Score = 27.6 bits (54), Expect(2) = 7e-066
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -2
Query: 33 GRRHRFPFFF 4
GRRHRFPF F
Sbjct: 86 GRRHRFPFLF 57
Score = 24.4 bits (47), Expect(3) = 9e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 119 VLPAVLRGSQG 151
>gb|CF759327.1|CF759327 DSAF1_43_G09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_43_G09_A011 5', mRNA sequence
Length = 388
Score = 294 bits (636), Expect = 1e-078
Identities = 121/122 (99%), Positives = 121/122 (99%)
Frame = +1 / +3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 21 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 200
Query: 253 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 432
QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY
Sbjct: 201 QESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYY 380
Query: 433 LV 438
LV
Sbjct: 381 LV 386
Score = 243 bits (524), Expect = 3e-063
Identities = 109/123 (88%), Positives = 111/123 (90%)
Frame = -3 / -1
Query: 440 WTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMMS 261
WTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFM+S
Sbjct: 388 WTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFMIS 209
Query: 260 DSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCPNLPLCPT**R 81
DSWMILLASRRTEGETKTSLRIMVSF LPSGR+SNSRNSCPNLPL PT* R
Sbjct: 208 DSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*YR 29
Query: 80 R*N 72
R*N
Sbjct: 28 R*N 20
Score = 87.7 bits (185), Expect(3) = 9e-024
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +3 / +2
Query: 183 ERHHDPQGGLRLALRPPRGQEDHPGVRHHEGGRQQL 290
ERHHDPQGGLRL LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 131 ERHHDPQGGLRLPLRPPRGQEDHPGVRYHEGGR*QL 238
Score = 36.8 bits (74), Expect(3) = 9e-024
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +2
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 287 QRAHFIHHFQDRL 325
Score = 24.4 bits (47), Expect(3) = 9e-024
Identities = 9/11 (81%), Positives = 11/11 (100%)
Frame = +3 / +2
Query: 72 VLPALLRGTQG 104
VLPA+LRG+QG
Sbjct: 20 VLPAVLRGSQG 52
>gb|AW679953.1|AW679953 WS1_33_A07.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 612
Score = 244 bits (527), Expect(3) = 5e-069
Identities = 105/108 (97%), Positives = 106/108 (98%)
Frame = +1 / +1
Query: 220 PSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSS 399
PSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSS
Sbjct: 1 PSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSS 180
Query: 400 KDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFM*LVCE 543
KDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 181 KDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYE 324
Score = 240 bits (519), Expect(3) = 7e-067
Identities = 101/104 (97%), Positives = 102/104 (98%)
Frame = -3 / -2
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 314 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 135
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRRTE 222
EMCSLPMTISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRRTE
Sbjct: 134 EMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRRTE 3
Score = 139 bits (298), Expect(3) = 5e-035
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -1
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 330 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 151
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 150 LGSGE*N 130
Score = 56.5 bits (117), Expect(5) = 5e-029
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +3
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 225 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 323
Score = 56.5 bits (117), Expect(5) = 5e-029
Identities = 21/23 (91%), Positives = 22/23 (95%)
Frame = +3 / +3
Query: 222 LRPPRGQEDHPGVRHHEGGRQQL 290
LRPPRGQEDHPGVR+HEGGR QL
Sbjct: 3 LRPPRGQEDHPGVRYHEGGR*QL 71
Score = 36.8 bits (74), Expect(5) = 5e-029
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +3
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 120 QRAHFIHHFQDRL 158
Score = 31.8 bits (63), Expect(3) = 5e-069
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 652 PFAFVLCKLLSSSE 693
PFAF LCKLLSSSE
Sbjct: 416 PFAFGLCKLLSSSE 457
Score = 29.0 bits (57), Expect(3) = 7e-067
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 692 SLLLSSLHKTNAKGGS 645
SLLLSSLH NAKG +
Sbjct: 456 SLLLSSLHNPNAKGST 409
Score = 28.6 bits (56), Expect(3) = 5e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 699 ITFTTTQQFAQNKCK 655
+ T TQQFAQ+KCK
Sbjct: 463 LQLTATQQFAQSKCK 419
Score = 26.3 bits (51), Expect(5) = 5e-029
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 656 LHLFCANC*VVVN 694
LHL CANC*V V+
Sbjct: 420 LHLDCANC*VAVS 458
Score = 25.8 bits (50), Expect(3) = 5e-069
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 378 ALGFVWNTGWEWN 416
Score = 24.9 bits (48), Expect(5) = 5e-029
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 618 ALCGALSGSGT 650
ALCG L GSGT
Sbjct: 385 ALCGTLGGSGT 417
Score = 24.9 bits (48), Expect(3) = 7e-067
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 416 VPLPPSVPHKAKR 378
Score = 21.7 bits (41), Expect(3) = 5e-035
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 417 GSTPTQCSTQSQ 382
>gb|BE355521.1|BE355521 DG1_114_A04.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 544
Score = 239 bits (516), Expect(3) = 1e-067
Identities = 103/106 (97%), Positives = 104/106 (98%)
Frame = +1 / +1
Query: 226 VLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD 405
VLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
Sbjct: 1 VLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD 180
Query: 406 PEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFM*LVCE 543
PEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 181 PEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYE 318
Score = 236 bits (509), Expect(3) = 2e-065
Identities = 99/102 (97%), Positives = 100/102 (98%)
Frame = -3 / -3
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 308 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 129
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLASRR 228
EMCSLPMTISSSWRPMRSGSGQLLSSSFM+SDSWMILLASRR
Sbjct: 128 EMCSLPMTISSSWRPMRSGSGQLLSSSFMISDSWMILLASRR 3
Score = 139 bits (298), Expect(3) = 3e-035
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -2
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 324 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 145
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 144 LGSGE*N 124
Score = 56.5 bits (117), Expect(5) = 8e-028
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +3
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 219 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 317
Score = 52.4 bits (108), Expect(5) = 8e-028
Identities = 19/21 (90%), Positives = 20/21 (95%)
Frame = +3 / +3
Query: 228 PPRGQEDHPGVRHHEGGRQQL 290
PPRGQEDHPGVR+HEGGR QL
Sbjct: 3 PPRGQEDHPGVRYHEGGR*QL 65
Score = 36.8 bits (74), Expect(5) = 8e-028
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +3
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 114 QRAHFIHHFQDRL 152
Score = 31.8 bits (63), Expect(3) = 1e-067
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 652 PFAFVLCKLLSSSE 693
PFAF LCKLLSSSE
Sbjct: 410 PFAFGLCKLLSSSE 451
Score = 29.0 bits (57), Expect(3) = 2e-065
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 692 SLLLSSLHKTNAKGGS 645
SLLLSSLH NAKG +
Sbjct: 450 SLLLSSLHNPNAKGST 403
Score = 28.6 bits (56), Expect(3) = 3e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 699 ITFTTTQQFAQNKCK 655
+ T TQQFAQ+KCK
Sbjct: 457 LQLTATQQFAQSKCK 413
Score = 26.3 bits (51), Expect(5) = 8e-028
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 656 LHLFCANC*VVVN 694
LHL CANC*V V+
Sbjct: 414 LHLDCANC*VAVS 452
Score = 25.8 bits (50), Expect(3) = 1e-067
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 372 ALGFVWNTGWEWN 410
Score = 24.9 bits (48), Expect(5) = 8e-028
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +1
Query: 618 ALCGALSGSGT 650
ALCG L GSGT
Sbjct: 379 ALCGTLGGSGT 411
Score = 24.9 bits (48), Expect(3) = 2e-065
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -3
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 410 VPLPPSVPHKAKR 372
Score = 21.7 bits (41), Expect(3) = 3e-035
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -2
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 411 GSTPTQCSTQSQ 376
>gb|CW447469.1|CW447469 fsbb001f180j18f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f180j18, DNA
sequence
Length = 714
Score = 149 bits (321), Expect(2) = 5e-067
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1 / -3
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVS S LREARRII
Sbjct: 673 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSRSALREARRII 494
Query: 253 QESDI 267
Q+SD+
Sbjct: 493 QQSDV 479
Score = 128 bits (274), Expect(2) = 5e-067
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +1 / -2
Query: 259 SDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV 438
S IM+EDD NWPEP+ IGRQELEIVMGNEHISFTTSKIGSLVDV S+DP+GLRIFYYLV
Sbjct: 350 SQIMREDDRNWPEPNYIGRQELEIVMGNEHISFTTSKIGSLVDVVGSRDPDGLRIFYYLV 171
Query: 439 Q 441
Q
Sbjct: 170 Q 168
Score = 107 bits (228), Expect(2) = 7e-023
Identities = 48/73 (65%), Positives = 58/73 (79%)
Frame = -3 / +1
Query: 446 RSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFM 267
++WT+**K+RRPSGSLL TSTR+PILEVVNEMCSLP+TISSS PM GSGQ LSSS +
Sbjct: 163 KTWTK**KMRRPSGSLLPTTSTRDPILEVVNEMCSLPITISSSCLPM*LGSGQFLSSSLI 342
Query: 266 MSDSWMILLASRR 228
+ D + S+R
Sbjct: 343 ICDGCQAINQSKR 381
Score = 100 bits (212), Expect(2) = 3e-024
Identities = 49/79 (62%), Positives = 54/79 (68%)
Frame = -3 / +3
Query: 308 MRSGSGQLLSSSFMMSDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSN 129
+R+ S + + SD WMILLASRR E ET TSLRIMVSF LPSGR+SN
Sbjct: 438 LRTESTRSTRRGELTSDCWMILLASRRAERETNTSLRIMVSFL*LELLAYRSLPSGRNSN 617
Query: 128 SRNSCPNLPLCPT**RR*N 72
SRNS PNLPLCPT* RR*N
Sbjct: 618 SRNSWPNLPLCPT*YRR*N 674
Score = 35.0 bits (70), Expect(2) = 3e-024
Identities = 16/31 (51%), Positives = 24/31 (77%)
Frame = -2 / +3
Query: 441 LDKVVEDPEALRVLAGLDIDEGADLGSGE*N 349
LD+VV+D A+ V A +ID+G++LG GE*+
Sbjct: 168 LDQVVKDA*AIWVSASHNIDKGSNLGGGE*D 260
Score = 23.1 bits (44), Expect(2) = 7e-023
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2 / +2
Query: 231 EDGGRDEDLLADH 193
E G DE LLADH
Sbjct: 515 EGGAGDEHLLADH 553
>gb|AW679913.1|AW679913 WS1_33_G08.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 582
Score = 230 bits (496), Expect(3) = 9e-064
Identities = 96/100 (96%), Positives = 98/100 (98%)
Frame = -3 / -1
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 300 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 121
Query: 353 EMCSLPMTISSSWRPMRSGSGQLLSSSFMMSDSWMILLAS 234
EMCSLPMTISSSWRPMRSGSGQLLS+SFM+SDSWMILLAS
Sbjct: 120 EMCSLPMTISSSWRPMRSGSGQLLSTSFMISDSWMILLAS 1
Score = 229 bits (494), Expect(3) = 1e-064
Identities = 99/103 (96%), Positives = 100/103 (97%)
Frame = +1 / +2
Query: 235 EARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEG 414
EARRIIQESDIMKE DSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEG
Sbjct: 2 EARRIIQESDIMKEVDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEG 181
Query: 415 LRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFM*LVCE 543
LRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAF+*L E
Sbjct: 182 LRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQAFV*LFYE 310
Score = 139 bits (298), Expect(3) = 4e-035
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -3
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 316 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 137
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 136 LGSGE*N 116
Score = 56.5 bits (117), Expect(5) = 5e-026
Identities = 26/33 (78%), Positives = 26/33 (78%)
Frame = +3 / +1
Query: 444 SEVFRVLAHQPSLQDQANPVLSSIPSLHVAGL* 542
SEVF V HQP LQDQANPVLSSIPSL V L*
Sbjct: 211 SEVFCVFTHQPPLQDQANPVLSSIPSLRVTVL* 309
Score = 46.0 bits (94), Expect(5) = 5e-026
Identities = 17/19 (89%), Positives = 18/19 (94%)
Frame = +3 / +1
Query: 234 RGQEDHPGVRHHEGGRQQL 290
RGQEDHPGVR+HEGGR QL
Sbjct: 1 RGQEDHPGVRYHEGGR*QL 57
Score = 36.8 bits (74), Expect(5) = 5e-026
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3 / +1
Query: 339 QRAHFIHHFQDRL 377
QRAHFIHHFQDRL
Sbjct: 106 QRAHFIHHFQDRL 144
Score = 31.8 bits (63), Expect(3) = 1e-064
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +3
Query: 652 PFAFVLCKLLSSSE 693
PFAF LCKLLSSSE
Sbjct: 402 PFAFGLCKLLSSSE 443
Score = 29.0 bits (57), Expect(3) = 9e-064
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 692 SLLLSSLHKTNAKGGS 645
SLLLSSLH NAKG +
Sbjct: 442 SLLLSSLHNPNAKGST 395
Score = 28.6 bits (56), Expect(3) = 4e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -2
Query: 699 ITFTTTQQFAQNKCK 655
+ T TQQFAQ+KCK
Sbjct: 449 LQLTATQQFAQSKCK 405
Score = 26.3 bits (51), Expect(5) = 5e-026
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +2 / +1
Query: 656 LHLFCANC*VVVN 694
LHL CANC*V V+
Sbjct: 406 LHLDCANC*VAVS 444
Score = 25.8 bits (50), Expect(3) = 1e-064
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +1
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 364 ALGFVWNTGWEWN 402
Score = 24.9 bits (48), Expect(5) = 5e-026
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +3 / +2
Query: 618 ALCGALSGSGT 650
ALCG L GSGT
Sbjct: 371 ALCGTLGGSGT 403
Score = 24.9 bits (48), Expect(3) = 9e-064
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -1
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 402 VPLPPSVPHKAKR 364
Score = 21.7 bits (41), Expect(3) = 4e-035
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -3
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 403 GSTPTQCSTQSQ 368
>gb|CW075941.1|CW075941 104_363_10809839_114_31800_287 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809839, DNA
sequence
Length = 705
Score = 145 bits (311), Expect(2) = 3e-055
Identities = 60/61 (98%), Positives = 60/61 (98%)
Frame = +1 / -1
Query: 259 SDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV 438
S IMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV
Sbjct: 444 SQIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLV 265
Query: 439 Q 441
Q
Sbjct: 264 Q 262
Score = 144 bits (308), Expect(2) = 2e-036
Identities = 62/73 (84%), Positives = 66/73 (90%)
Frame = -3 / +2
Query: 446 RSWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFM 267
R+WTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFM
Sbjct: 257 RTWTR**KIRRPSGSLLDWTSTREPILEVVNEMCSLPMTISSSWRPMRSGSGQLLSSSFM 436
Query: 266 MSDSWMILLASRR 228
+ D + + S R
Sbjct: 437 ICDGGVGVNQSNR 475
Score = 93.6 bits (198), Expect(2) = 3e-055
Identities = 39/40 (97%), Positives = 40/40 (100%)
Frame = +1 / -3
Query: 148 GKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDI 267
GKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESD+
Sbjct: 703 GKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDV 584
Score = 69.8 bits (146), Expect(2) = 1e-023
Identities = 30/31 (96%), Positives = 31/31 (100%)
Frame = -2 / +1
Query: 441 LDKVVEDPEALRVLAGLDIDEGADLGSGE*N 349
LD+VVEDPEALRVLAGLDIDEGADLGSGE*N
Sbjct: 262 LDEVVEDPEALRVLAGLDIDEGADLGSGE*N 354
Score = 63.4 bits (132), Expect(2) = 1e-023
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = -3 / +3
Query: 263 SDSWMILLASRRTEGETKTSLRIMVSF 183
SDSWMILLASRRTEGETKTSLRIMVSF
Sbjct: 588 SDSWMILLASRRTEGETKTSLRIMVSF 668
Score = 32.2 bits (64), Expect(2) = 2e-036
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = -2 / +2
Query: 231 EDGGRDEDLLADH 193
EDGG DEDLLADH
Sbjct: 620 EDGGGDEDLLADH 658
>gb|AW746704.1|AW746704 WS1_54_B05.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 513
Score = 180 bits (387), Expect(3) = 6e-049
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = -3 / -2
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 230 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 51
Query: 353 EMCSLPMTISSSWRPM 306
EMCSLPMTISSSWRPM
Sbjct: 50 EMCSLPMTISSSWRPM 3
Score = 176 bits (379), Expect(3) = 6e-049
Identities = 77/80 (96%), Positives = 78/80 (97%)
Frame = +1 / +1
Query: 304 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 483
RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF
Sbjct: 1 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 180
Query: 484 KIKPIQS*APSQAFM*LVCE 543
KIKPIQS*APSQAF+*L E
Sbjct: 181 KIKPIQS*APSQAFV*LFYE 240
Score = 139 bits (298), Expect(3) = 3e-035
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -1
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 246 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 67
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 66 LGSGE*N 46
Score = 31.8 bits (63), Expect(3) = 6e-049
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 652 PFAFVLCKLLSSSE 693
PFAF LCKLLSSSE
Sbjct: 332 PFAFGLCKLLSSSE 373
Score = 29.0 bits (57), Expect(3) = 6e-049
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 692 SLLLSSLHKTNAKGGS 645
SLLLSSLH NAKG +
Sbjct: 372 SLLLSSLHNPNAKGST 325
Score = 28.6 bits (56), Expect(3) = 3e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 699 ITFTTTQQFAQNKCK 655
+ T TQQFAQ+KCK
Sbjct: 379 LQLTATQQFAQSKCK 335
Score = 25.8 bits (50), Expect(3) = 6e-049
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 294 ALGFVWNTGWEWN 332
Score = 24.9 bits (48), Expect(3) = 6e-049
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 332 VPLPPSVPHKAKR 294
Score = 21.7 bits (41), Expect(3) = 3e-035
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 333 GSTPTQCSTQSQ 298
>gb|AW746635.1|AW746635 WS1_54_B05.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 459
Score = 180 bits (387), Expect(3) = 6e-049
Identities = 74/76 (97%), Positives = 74/76 (97%)
Frame = -3 / -2
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 230 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 51
Query: 353 EMCSLPMTISSSWRPM 306
EMCSLPMTISSSWRPM
Sbjct: 50 EMCSLPMTISSSWRPM 3
Score = 176 bits (379), Expect(3) = 6e-049
Identities = 77/80 (96%), Positives = 78/80 (97%)
Frame = +1 / +1
Query: 304 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 483
RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF
Sbjct: 1 RIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHF 180
Query: 484 KIKPIQS*APSQAFM*LVCE 543
KIKPIQS*APSQAF+*L E
Sbjct: 181 KIKPIQS*APSQAFV*LFYE 240
Score = 139 bits (298), Expect(3) = 2e-035
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -1
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 246 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 67
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 66 LGSGE*N 46
Score = 31.8 bits (63), Expect(3) = 6e-049
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +2
Query: 652 PFAFVLCKLLSSSE 693
PFAF LCKLLSSSE
Sbjct: 332 PFAFGLCKLLSSSE 373
Score = 29.0 bits (57), Expect(3) = 6e-049
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 692 SLLLSSLHKTNAKGGS 645
SLLLSSLH NAKG +
Sbjct: 372 SLLLSSLHNPNAKGST 325
Score = 28.6 bits (56), Expect(3) = 2e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 699 ITFTTTQQFAQNKCK 655
+ T TQQFAQ+KCK
Sbjct: 379 LQLTATQQFAQSKCK 335
Score = 25.8 bits (50), Expect(3) = 6e-049
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +3
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 294 ALGFVWNTGWEWN 332
Score = 24.9 bits (48), Expect(3) = 6e-049
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 332 VPLPPSVPHKAKR 294
Score = 21.7 bits (41), Expect(3) = 2e-035
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 333 GSTPTQCSTQSQ 298
>gb|CW447470.1|CW447470 fsbb001f180j18k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f180j18, DNA
sequence
Length = 715
Score = 149 bits (321), Expect(2) = 1e-046
Identities = 60/65 (92%), Positives = 62/65 (95%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVS S LREARRII
Sbjct: 308 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSRSALREARRII 487
Query: 253 QESDI 267
Q+SD+
Sbjct: 488 QQSDV 502
Score = 60.2 bits (125), Expect(2) = 1e-046
Identities = 23/28 (82%), Positives = 25/28 (89%)
Frame = +1 / +1
Query: 259 SDIMKEDDSNWPEPDRIGRQELEIVMGN 342
S IM+EDD NWPEP+ IGRQELEIVMGN
Sbjct: 631 SQIMREDDRNWPEPNYIGRQELEIVMGN 714
>gb|CW075942.1|CW075942 104_363_10809839_116_31801_287 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10809839, DNA
sequence
Length = 681
Score = 157 bits (337), Expect(2) = 4e-046
Identities = 63/65 (96%), Positives = 64/65 (98%)
Frame = +1 / +2
Query: 73 FYLRYYVGHKGKFGHEFLEFELRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 252
FYLRYYVGHKGKFGHEFLEFE RPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII
Sbjct: 287 FYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRII 466
Query: 253 QESDI 267
QESD+
Sbjct: 467 QESDV 481
Score = 107 bits (228), Expect(2) = 7e-025
Identities = 51/64 (79%), Positives = 52/64 (81%)
Frame = -3 / -1
Query: 263 SDSWMILLASRRTEGETKTSLRIMVSFXXXXXXXXXXLPSGRSSNSRNSCPNLPLCPT** 84
SDSWMILLASRRTEGETKTSLRIMVSF LPSGR+SNSRNSCPNLPL PT*
Sbjct: 477 SDSWMILLASRRTEGETKTSLRIMVSFL*LELLA*RSLPSGRNSNSRNSCPNLPL*PT*Y 298
Query: 83 RR*N 72
RR*N
Sbjct: 297 RR*N 286
Score = 51.0 bits (105), Expect(2) = 4e-046
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +1 / +3
Query: 259 SDIMKEDDSNWPEPDRIGRQ 318
S IMKEDDSNWPEPDRIGRQ
Sbjct: 621 SHIMKEDDSNWPEPDRIGRQ 680
Score = 27.6 bits (54), Expect(2) = 7e-025
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / -3
Query: 33 GRRHRFPFFF 4
GRRHRFPF F
Sbjct: 253 GRRHRFPFLF 224
>gb|AW923785.1|AW923785 DG1_59_E12.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 350
Score = 150 bits (322), Expect(3) = 4e-040
Identities = 62/64 (96%), Positives = 62/64 (96%)
Frame = -3 / -2
Query: 533 SYMKAWDGAQDWIGLILK*RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 354
SY KAWDGAQDWIGLILK RLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN
Sbjct: 193 SYTKAWDGAQDWIGLILKWRLMSENTKHFRSWTR**KIRRPSGSLLDWTSTREPILEVVN 14
Query: 353 EMCS 342
EMCS
Sbjct: 13 EMCS 2
Score = 147 bits (315), Expect(3) = 3e-040
Identities = 64/67 (95%), Positives = 65/67 (97%)
Frame = +1 / +3
Query: 343 EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQA 522
EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQA
Sbjct: 3 EHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKIKPIQS*APSQA 182
Query: 523 FM*LVCE 543
F+*L E
Sbjct: 183 FV*LFYE 203
Score = 139 bits (298), Expect(3) = 1e-035
Identities = 58/67 (86%), Positives = 64/67 (95%)
Frame = -2 / -1
Query: 549 RSLTNQLHEGLGWSSRLDWLDLEVKVDEREHETLQILDKVVEDPEALRVLAGLDIDEGAD 370
++L QLHEGLGWSSRLDWLDLEV+VDE +H+TLQILD+VVEDPEALRVLAGLDIDEGAD
Sbjct: 209 KTLIKQLHEGLGWSSRLDWLDLEVEVDE*KHKTLQILDEVVEDPEALRVLAGLDIDEGAD 30
Query: 369 LGSGE*N 349
LGSGE*N
Sbjct: 29 LGSGE*N 9
Score = 31.8 bits (63), Expect(3) = 3e-040
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1 / +1
Query: 652 PFAFVLCKLLSSSE 693
PFAF LCKLLSSSE
Sbjct: 295 PFAFGLCKLLSSSE 336
Score = 29.0 bits (57), Expect(3) = 4e-040
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -3 / -1
Query: 692 SLLLSSLHKTNAKGGS 645
SLLLSSLH NAKG +
Sbjct: 335 SLLLSSLHNPNAKGST 288
Score = 28.6 bits (56), Expect(3) = 1e-035
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 699 ITFTTTQQFAQNKCK 655
+ T TQQFAQ+KCK
Sbjct: 342 LQLTATQQFAQSKCK 298
Score = 25.8 bits (50), Expect(3) = 3e-040
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2 / +2
Query: 611 AIGPVWCT*WKWN 649
A+G VW T W+WN
Sbjct: 257 ALGFVWNTGWEWN 295
Score = 24.9 bits (48), Expect(3) = 4e-040
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1 / -2
Query: 649 VPLPLSAPHRADR 611
VPLP S PH+A R
Sbjct: 295 VPLPPSVPHKAKR 257
Score = 21.7 bits (41), Expect(3) = 1e-035
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -3 / -1
Query: 650 GSTSTKCTTQGR 615
GST T+C+TQ +
Sbjct: 296 GSTPTQCSTQSQ 261
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 605,144,874
Number of Sequences: 832831
Number of extensions: 7346664
Number of successful extensions: 65655
Number of sequences better than 1.0e-020: 21
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 21624090124
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)