TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716323.2.2
(764 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stres... 347 9e-095
gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stresse... 313 2e-084
gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkal... 255 6e-067
gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkal... 229 3e-059
gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adap... 117 5e-057
gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinol... 212 6e-054
gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots S... 171 1e-053
gb|CF758077.1|CF758077 DSAF1_27_A03.g1_A011 Drought-stresse... 203 2e-051
gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorgh... 142 4e-051
gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves... 200 2e-050
gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkal... 137 4e-050
gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/c... 137 4e-050
gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1... 198 1e-049
gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methy... 135 5e-049
gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorgh... 101 4e-047
gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle... 187 2e-046
gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced ... 135 7e-045
gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated ... 111 3e-042
gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorgh... 110 1e-041
gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1... 166 5e-040
gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorgh... 110 5e-039
gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-defic... 149 6e-035
gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seed... 148 1e-034
gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorgh... 97 6e-034
gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorgh... 116 6e-034
gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorgh... 116 6e-034
gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorgh... 115 4e-033
gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation... 143 4e-033
gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed see... 136 3e-031
gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum m... 116 6e-031
gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorgh... 116 6e-031
gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorgh... 116 6e-031
gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation... 84 7e-031
gb|CW380206.1|CW380206 fsbb001f059o07f0 Sorghum methylation... 81 1e-030
gb|CF757766.1|CF757766 DSAF1_22_A08.g1_A011 Drought-stresse... 133 3e-030
gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stres... 98 3e-028
gb|CW327532.1|CW327532 104_823_11478800_116_35982_028 Sorgh... 63 3e-027
gb|CW029877.1|CW029877 104_257_10499927_116_30402 Sorghum m... 63 4e-027
gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves... 122 5e-027
gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation... 68 7e-027
gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorgh... 103 8e-027
gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-tre... 119 6e-026
gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorgh... 81 7e-026
gb|CW090128.1|CW090128 104_435_10949104_114_32612_050 Sorgh... 101 5e-024
gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorgh... 55 5e-023
gb|CW304120.1|CW304120 104_788_11465610_148_35698_065 Sorgh... 69 5e-023
gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum m... 81 9e-023
gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorgh... 55 1e-022
gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorgh... 55 1e-022
gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorgh... 55 1e-022
gb|CW030917.1|CW030917 104_259_10500498_116_30398 Sorghum m... 92 2e-022
gb|CW416941.1|CW416941 fsbb001f117l12f0 Sorghum methylation... 92 2e-022
gb|CW432107.1|CW432107 fsbb001f146k07k0 Sorghum methylation... 95 3e-022
gb|CL190994.1|CL190994 104_409_10906471_116_32496_022 Sorgh... 106 3e-022
gb|CF432526.1|CF432526 NIT1_17_E08.b1_A002 Nitrogen-deficie... 105 6e-022
gb|CW271687.1|CW271687 104_744_11403133_116_35346_063 Sorgh... 50 3e-021
gb|CW090129.1|CW090129 104_435_10949104_116_32613_050 Sorgh... 103 3e-021
gb|CW215264.1|CW215264 104_647_11194448_148_37463_024 Sorgh... 92 4e-021
gb|CX613072.1|CX613072 GABR1_6_C10.b1_A002 GA- or brassinol... 103 4e-021
gb|BZ329364.1|BZ329364 hv85d06.b1 WGS-SbicolorF (JM107 adap... 102 5e-021
gb|CW327563.1|CW327563 104_823_11478815_148_35980_092 Sorgh... 63 6e-021
gb|CW086531.1|CW086531 104_430_10947042_116_33018_071 Sorgh... 63 6e-021
gb|CW327562.1|CW327562 104_823_11478815_116_35979_092 Sorgh... 63 6e-021
>gb|CN134916.1|CN134916 OX1_29_H04.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_29_H04_A002 3', mRNA sequence
Length = 737
Score = 347 bits (753), Expect = 9e-095
Identities = 148/155 (95%), Positives = 149/155 (96%)
Frame = +3 / +1
Query: 105 PVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAEL 284
PVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDG LYIVDRLKELIKYKGYQVPPAEL
Sbjct: 1 PVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAEL 180
Query: 285 EHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRR 464
HILNSHPDIMDAAVIPYPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQVAPYKKVRR
Sbjct: 181 GHILNSHPDIMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRR 360
Query: 465 VAFVSAIPKSPAGKILRRELVEXAVSMGTXKL*SL 569
VAFVSAIPKSPAGKILRRELVE AVSM T KL*SL
Sbjct: 361 VAFVSAIPKSPAGKILRRELVEQAVSMVTSKL*SL 465
Score = 342 bits (742), Expect = 3e-093
Identities = 134/154 (87%), Positives = 141/154 (91%)
Frame = -1 / -3
Query: 566 TSKLXGTHGHGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 387
TSKL G HGHG LYKLPPQDLPSRRFGNCRNKGHST+FLV CDLFSHEIHDLLLGKV* W
Sbjct: 462 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGKV*AW 283
Query: 386 FPHYKSHWELPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PI 207
FPHYKSHW LP +FVW+RNNCC+HDIRMRIQDM QFG RYLISLV YQLFQPINNVE PI
Sbjct: 282 FPHYKSHW*LPDIFVWVRNNCCIHDIRMRIQDMPQFGWRYLISLVFYQLFQPINNVEKPI 103
Query: 206 LVEVA*VTGFQPAF*IHCCCSSLVVTDITFHDDW 105
L+EVA*VT FQPAF*I+CCCSSLVVT ITFHD+W
Sbjct: 102 LIEVA*VTSFQPAF*INCCCSSLVVTHITFHDNW 1
Score = 259 bits (559), Expect = 5e-068
Identities = 117/160 (73%), Positives = 120/160 (75%)
Frame = -2 / -1
Query: 586 DVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 407
D ++ KLQSL V MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 482 DFQVSNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 303
Query: 406 SVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRS 227
VRF+PGFLTIKAIGSCP G*EFRIC SSAGGT*YPLYFINSFNRS
Sbjct: 302 LVRFEPGFLTIKAIGSCPTSSSGYGITAASMISG*EFRICPSSAGGT*YPLYFINSFNRS 123
Query: 226 TM*SNPSSLK*HRSPVFNQXXXXXXXXXXXXXXXXPFMTT 107
TM* NPSSLK*HRSPVFNQ PFMTT
Sbjct: 122 TM*RNPSSLK*HRSPVFNQPSESTVAAVASSSPT*PFMTT 3
Score = 221 bits (478), Expect = 7e-057
Identities = 99/125 (79%), Positives = 101/125 (80%)
Frame = +1 / +2
Query: 118 KVMSVTTRLLQQQWIQKAG*KPVTYATSTRMGYSTLLIG*KS**STRDIRYLLPNWXXXX 297
KVM VTTRLLQQQ IQKAG*K VTYATS RMG+STLLIG*KS**+TRDIRYL PNW
Sbjct: 14 KVMWVTTRLLQQQLIQKAG*KLVTYATSMRMGFSTLLIG*KS**NTRDIRYLQPNWGIS* 193
Query: 298 XXXXXXWTQQLFLIQTKTPGNSQWLL**GNQGQTLPSNKSWISWLNRSHPTRKFVEWPLF 477
W QQLF QTK GN QWLL**GNQ QTLPSNKSWISWLNRSH TRK VEWPLF
Sbjct: 194 ILILISWMQQLFRTQTKMSGNYQWLL**GNQAQTLPSNKSWISWLNRSHRTRKSVEWPLF 373
Query: 478 LQFPN 492
LQFPN
Sbjct: 374 LQFPN 388
Score = 163 bits (351), Expect(2) = 3e-073
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +3
Query: 356 ATPNGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGACRAX 535
AT NGFYSEETR+KPY+ATSHGFRG*TGRT+QES SSGLCFCNSQIACWEDLAAGACRA
Sbjct: 252 ATTNGFYSEETRLKPYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAG 431
Query: 536 RVHGYLQALKF 568
RVHGYLQALKF
Sbjct: 432 RVHGYLQALKF 464
Score = 133 bits (285), Expect(2) = 3e-073
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = +2 / +3
Query: 107 SRHERLCR*RRGYCSNSGFRRLVENR*PMLLQRGWVTLHC*SVERVDKVQGISGTSCRTG 286
S HERLC *RRGYCSNS FRRLVEN *PMLLQ GWV+LHC*SVERVDK+QGISGTS RTG
Sbjct: 3 SCHERLCG*RRGYCSNS*FRRLVENW*PMLLQ*GWVSLHC*SVERVDKIQGISGTSSRTG 182
Query: 287 AYPEF 301
AYPEF
Sbjct: 183 AYPEF 197
Score = 128 bits (275), Expect(2) = 1e-048
Identities = 60/80 (75%), Positives = 62/80 (77%)
Frame = -3 / -2
Query: 408 AR*GLTLVSSL*KPLGVAXXXXXXXXXXXRP*YQDENSGYAPVRQEVPDIPCTLSTLSTD 229
A *GL+LVSSL*KPL VA P*YQDENSGYAPVR EVPDIPC LSTLSTD
Sbjct: 304 AW*GLSLVSSL*KPLVVARHLRLGTE*LLHP*YQDENSGYAPVRLEVPDIPCILSTLSTD 125
Query: 228 QQCRVTHPR*SSIGHRFSTS 169
QQCR THP *SSIGH+FSTS
Sbjct: 124 QQCRETHPH*SSIGHQFSTS 65
Score = 85.8 bits (181), Expect(2) = 1e-048
Identities = 36/40 (90%), Positives = 36/40 (90%)
Frame = -3 / -2
Query: 567 NFKAXRYPWTRXALQAPAARSSQQAIWELQKQRPLDELSC 448
NFKA R PWTR ALQAPAARSSQQAIWELQKQRPLD LSC
Sbjct: 463 NFKAWR*PWTRPALQAPAARSSQQAIWELQKQRPLDGLSC 344
>gb|CF760165.1|CF760165 DSAF1_56_C09.b1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_56_C09_A011 5', mRNA sequence
Length = 564
Score = 313 bits (678), Expect = 2e-084
Identities = 133/139 (95%), Positives = 134/139 (96%)
Frame = +3 / +1
Query: 153 TVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 332
TVDSEGWLKTGDLCYFNEDG LYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI
Sbjct: 1 TVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 180
Query: 333 PYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL 512
PYPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL
Sbjct: 181 PYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKIL 360
Query: 513 RRELVEXAVSMGTXKL*SL 569
RRELVE AVSM T KL*SL
Sbjct: 361 RRELVEQAVSMVTSKL*SL 417
Score = 308 bits (666), Expect = 9e-083
Identities = 121/138 (87%), Positives = 127/138 (92%)
Frame = -1 / -1
Query: 566 TSKLXGTHGHGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 387
TSKL G HGHG LYKLPPQDLPSRRFGNCRNKGHST+FLV CDLFSHEIHDLLLGKV* W
Sbjct: 414 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGKV*AW 235
Query: 386 FPHYKSHWELPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PI 207
FPHYKSHW LP +FVW+RNNCC+HDIRMRIQDMLQFG RYLISLV YQLFQPINNVE PI
Sbjct: 234 FPHYKSHW*LPDIFVWVRNNCCIHDIRMRIQDMLQFGWRYLISLVFYQLFQPINNVEKPI 55
Query: 206 LVEVA*VTGFQPAF*IHC 153
L+EVA*VT FQPAF*I+C
Sbjct: 54 LIEVA*VTSFQPAF*INC 1
Score = 255 bits (552), Expect = 5e-067
Identities = 113/139 (81%), Positives = 115/139 (82%)
Frame = -2 / -2
Query: 586 DVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 407
D + KLQSL V MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 434 DFQASNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 255
Query: 406 SVRFDPGFLTIKAIGSCPXXXXXXXXXXXXXXXG*EFRICSSSAGGT*YPLYFINSFNRS 227
VRF+PGFLTIKAIGSCP G*EFRICSSSAGGT*YPLYFINSFNRS
Sbjct: 254 LVRFEPGFLTIKAIGSCPTSSSGYGITAASMISG*EFRICSSSAGGT*YPLYFINSFNRS 75
Query: 226 TM*SNPSSLK*HRSPVFNQ 170
TM* NPSSLK*HRSPVFNQ
Sbjct: 74 TM*RNPSSLK*HRSPVFNQ 18
Score = 200 bits (431), Expect = 2e-050
Identities = 88/113 (77%), Positives = 90/113 (79%)
Frame = +1 / +2
Query: 154 QWIQKAG*KPVTYATSTRMGYSTLLIG*KS**STRDIRYLLPNWXXXXXXXXXXWTQQLF 333
Q IQKAG*K VTYATS RMG+STLLIG*KS**+TRDIRYL PNW W QQLF
Sbjct: 2 QLIQKAG*KLVTYATSMRMGFSTLLIG*KS**NTRDIRYLQPNWSIS*ILILISWMQQLF 181
Query: 334 LIQTKTPGNSQWLL**GNQGQTLPSNKSWISWLNRSHPTRKFVEWPLFLQFPN 492
QTK GN QWLL**GNQ QTLPSNKSWISWLNRSH TRK VEWPLFLQFPN
Sbjct: 182 RTQTKMSGNYQWLL**GNQAQTLPSNKSWISWLNRSHRTRKSVEWPLFLQFPN 340
Score = 163 bits (351), Expect(2) = 3e-063
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +3
Query: 356 ATPNGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGACRAX 535
AT NGFYSEETR+KPY+ATSHGFRG*TGRT+QES SSGLCFCNSQIACWEDLAAGACRA
Sbjct: 204 ATTNGFYSEETRLKPYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAG 383
Query: 536 RVHGYLQALKF 568
RVHGYLQALKF
Sbjct: 384 RVHGYLQALKF 416
Score = 128 bits (275), Expect(2) = 1e-048
Identities = 60/80 (75%), Positives = 62/80 (77%)
Frame = -3 / -3
Query: 408 AR*GLTLVSSL*KPLGVAXXXXXXXXXXXRP*YQDENSGYAPVRQEVPDIPCTLSTLSTD 229
A *GL+LVSSL*KPL VA P*YQDENSGYAPVR EVPDIPC LSTLSTD
Sbjct: 256 AW*GLSLVSSL*KPLVVARHLRLGTE*LLHP*YQDENSGYAPVRLEVPDIPCILSTLSTD 77
Query: 228 QQCRVTHPR*SSIGHRFSTS 169
QQCR THP *SSIGH+FSTS
Sbjct: 76 QQCRETHPH*SSIGHQFSTS 17
Score = 100 bits (212), Expect(2) = 3e-063
Identities = 42/47 (89%), Positives = 44/47 (93%)
Frame = +2 / +3
Query: 161 FRRLVENR*PMLLQRGWVTLHC*SVERVDKVQGISGTSCRTGAYPEF 301
FRRLVEN *PMLLQ GWV+LHC*SVERVDK+QGISGTS RTGAYPEF
Sbjct: 9 FRRLVENW*PMLLQ*GWVSLHC*SVERVDKIQGISGTSSRTGAYPEF 149
Score = 85.8 bits (181), Expect(2) = 1e-048
Identities = 36/40 (90%), Positives = 36/40 (90%)
Frame = -3 / -3
Query: 567 NFKAXRYPWTRXALQAPAARSSQQAIWELQKQRPLDELSC 448
NFKA R PWTR ALQAPAARSSQQAIWELQKQRPLD LSC
Sbjct: 415 NFKAWR*PWTRPALQAPAARSSQQAIWELQKQRPLDGLSC 296
>gb|CN127673.1|CN127673 RHOH1_24_H12.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_24_H12_A002 3', mRNA sequence
Length = 759
Score = 255 bits (551), Expect = 6e-067
Identities = 100/149 (67%), Positives = 127/149 (85%)
Frame = +3 / +2
Query: 96 VRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPP 275
+RGP VMKGY + EAT +T+ +GWLKTGDLCY +EDG L++VDRLKELIKYKGYQVPP
Sbjct: 2 IRGPYVMKGYFKNTEATQSTLTPDGWLKTGDLCYIDEDGYLFVVDRLKELIKYKGYQVPP 181
Query: 276 AELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKK 455
AELE +L +H +I D AVIP+PD + GQ PMA++VRK GSNL+E++VM+FVAKQVAPYKK
Sbjct: 182 AELEALLLTHSEIQDVAVIPFPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQVAPYKK 361
Query: 456 VRRVAFVSAIPKSPAGKILRRELVEXAVS 542
VR+VAFV+ IPK+ +GKILR++L++ A S
Sbjct: 362 VRKVAFVTEIPKNASGKILRKDLIKLATS 448
Score = 108 bits (231), Expect = 9e-023
Identities = 57/149 (38%), Positives = 77/149 (51%)
Frame = -1 / -3
Query: 542 GHGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PWFPHYKSHW 363
G G L ++ PQ L R GN +K H +N L+ LF H++H L L ++ P PHY HW
Sbjct: 448 GCGELDEILPQYLAGRVLGNFCHKRHLSNLLIRRYLFGHKLHHLAL*QIAPLLPHYVGHW 269
Query: 362 ELPGVFVWIRNNCCVHDIRMRIQDMLQFGRRYLISLVLYQLFQPINNVE*PILVEVA*VT 183
EL + + R N + D + Q Q RR+LI V QL Q I++ E PI V VA +
Sbjct: 268 ELADLPIRKRYNGDILDF*VC*QKSFQLCRRHLIPFVFDQLLQTIHHKEIPIFVYVAEIP 89
Query: 182 GFQPAF*IHCCCSSLVVTDITFHDDWSSD 96
+P+ C L V +I FHD W D
Sbjct: 88 SLEPSIRCQC*LCCLRVLEIPFHDVWPPD 2
>gb|CN129079.1|CN129079 RHOH1_33_H09.b3_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_33_H09_A002 3', mRNA sequence
Length = 733
Score = 229 bits (495), Expect = 3e-059
Identities = 93/172 (54%), Positives = 126/172 (73%)
Frame = +3 / +2
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G + + E KIVDP TG L Q GE+ +RG +MKGY+ + EATA T+D EGWL TGD
Sbjct: 95 GTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKGYLNNPEATAKTIDDEGWLDTGD 274
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPM 368
+ Y ++D ++IVDRLKELIKYKG+QV PAELE +L +HP I DAAV+P D+ G++P+
Sbjct: 275 IGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIADAAVVPMKDDSCGEIPV 454
Query: 369 AFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
AF+V G +TE ++ +VAKQV YK++ +V FV AIPK+P+GKILR++L
Sbjct: 455 AFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKDL 610
>gb|BZ350862.1|BZ350862 ht61f07.g1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ht61f07 5', DNA sequence
Length = 714
Score = 117 bits (251), Expect(3) = 5e-057
Identities = 47/48 (97%), Positives = 47/48 (97%)
Frame = +3 / +3
Query: 126 VGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
VGDDEATAATVDSEGWLKTGDLCYFNEDG LYIVDRLKELIKYKGYQV
Sbjct: 3 VGDDEATAATVDSEGWLKTGDLCYFNEDGFLYIVDRLKELIKYKGYQV 146
Score = 99.1 bits (210), Expect(3) = 6e-039
Identities = 42/50 (84%), Positives = 45/50 (90%)
Frame = +2 / +2
Query: 125 CR*RRGYCSNSGFRRLVENR*PMLLQRGWVTLHC*SVERVDKVQGISGTS 274
C *RRGYCSNS FRRLVEN *PMLLQ GWV+LHC*SVERVDK+QGISG +
Sbjct: 2 CG*RRGYCSNS*FRRLVENW*PMLLQ*GWVSLHC*SVERVDKIQGISGAA 151
Score = 96.8 bits (205), Expect(3) = 6e-051
Identities = 41/48 (85%), Positives = 45/48 (93%)
Frame = -1 / -2
Query: 272 RYLISLVLYQLFQPINNVE*PILVEVA*VTGFQPAF*IHCCCSSLVVT 129
++LISLV YQLFQPINNVE PIL+EVA*VT FQPAF*I+CCCSSLVVT
Sbjct: 149 QHLISLVFYQLFQPINNVEKPILIEVA*VTSFQPAF*INCCCSSLVVT 6
Score = 85.8 bits (181), Expect(3) = 6e-032
Identities = 42/48 (87%), Positives = 44/48 (91%)
Frame = +1 / +1
Query: 124 MSVTTRLLQQQWIQKAG*KPVTYATSTRMGYSTLLIG*KS**STRDIR 267
M VTTRLLQQQ IQKAG*K VTYATS RMG+STLLIG*KS**+TRDIR
Sbjct: 1 MWVTTRLLQQQLIQKAG*KLVTYATSMRMGFSTLLIG*KS**NTRDIR 144
Score = 82.6 bits (174), Expect(3) = 5e-057
Identities = 34/39 (87%), Positives = 36/39 (92%)
Frame = +3 / +1
Query: 324 AVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
A+ YPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQV
Sbjct: 415 ALCRYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQV 531
Score = 82.2 bits (173), Expect(3) = 6e-051
Identities = 30/38 (78%), Positives = 32/38 (84%)
Frame = -1 / -1
Query: 437 LFSHEIHDLLLGKV*PWFPHYKSHWELPGVFVWIRNNC 324
LFSHEIHDLLLGKV* WFPHYKSHW LP +FVW+ C
Sbjct: 528 LFSHEIHDLLLGKV*AWFPHYKSHW*LPDIFVWVPA*C 415
Score = 75.3 bits (158), Expect(3) = 2e-035
Identities = 32/33 (96%), Positives = 32/33 (96%)
Frame = -2 / -3
Query: 268 T*YPLYFINSFNRSTM*SNPSSLK*HRSPVFNQ 170
T*YPLYFINSFNRSTM* NPSSLK*HRSPVFNQ
Sbjct: 145 T*YPLYFINSFNRSTM*RNPSSLK*HRSPVFNQ 47
Score = 73.0 bits (153), Expect(3) = 2e-035
Identities = 29/37 (78%), Positives = 31/37 (83%)
Frame = -2 / -2
Query: 463 RRTFL*GATCLATKSMTCCSVRFDPGFLTIKAIGSCP 353
+ T * TCLATKSMTCC VRF+PGFLTIKAIGSCP
Sbjct: 554 QNTIK*QCTCLATKSMTCCLVRFEPGFLTIKAIGSCP 444
Score = 72.1 bits (151), Expect(3) = 6e-039
Identities = 29/33 (87%), Positives = 29/33 (87%)
Frame = +1 / +2
Query: 340 QTKTPGNSQWLL**GNQGQTLPSNKSWISWLNR 438
QTK GN QWLL**GNQ QTLPSNKSWISWLNR
Sbjct: 431 QTKMSGNYQWLL**GNQAQTLPSNKSWISWLNR 529
Score = 64.3 bits (134), Expect(3) = 6e-032
Identities = 25/28 (89%), Positives = 27/28 (96%)
Frame = +2 / +3
Query: 356 ATPNGFYSEETRVKPYRATSHGFRG*TG 439
AT NGFYSEETR+KPY+ATSHGFRG*TG
Sbjct: 447 ATTNGFYSEETRLKPYQATSHGFRG*TG 530
Score = 62.0 bits (129), Expect(3) = 6e-051
Identities = 22/26 (84%), Positives = 25/26 (96%)
Frame = -1 / -1
Query: 341 WIRNNCCVHDIRMRIQDMLQFGRRYL 264
++RNNCC+HDIRMRIQDMLQFG RYL
Sbjct: 321 YLRNNCCIHDIRMRIQDMLQFGWRYL 244
Score = 61.1 bits (127), Expect(3) = 5e-057
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +3 / +1
Query: 243 LIKYKGYQVPPAELEHILNSHPDIMDAAVIP 335
++ Y QVPPAELEHILNSHPDIMDAAVIP
Sbjct: 223 VLTYILLQVPPAELEHILNSHPDIMDAAVIP 315
Score = 43.2 bits (88), Expect(3) = 2e-035
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = -3 / -3
Query: 318 P*YQDENSGYAPVRQEVP 265
P*YQDENSGYAPVR EVP
Sbjct: 298 P*YQDENSGYAPVRLEVP 245
Score = 29.9 bits (59), Expect(3) = 6e-032
Identities = 11/12 (91%), Positives = 11/12 (91%)
Frame = +2 / +3
Query: 266 GTSCRTGAYPEF 301
GTS RTGAYPEF
Sbjct: 246 GTSSRTGAYPEF 281
Score = 29.5 bits (58), Expect(3) = 6e-039
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1 / +2
Query: 265 RYLLPNWXXXXXXXXXXWTQQLF 333
RYL PNW W QQLF
Sbjct: 245 RYLQPNWSIS*ILILISWMQQLF 313
>gb|CX613435.1|CX613435 GABR1_8_D10.b1_A002 GA- or brassinolide-treated seedlings Sorghum
bicolor cDNA clone GABR1_8_D10_A002 3', mRNA sequence
Length = 693
Score = 212 bits (457), Expect = 6e-054
Identities = 83/149 (55%), Positives = 116/149 (77%)
Frame = +3 / +3
Query: 78 QRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYK 257
Q GE+ +RG +MKGY+ D E+T T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYK
Sbjct: 9 QPGEICIRGEQIMKGYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYK 188
Query: 258 GYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQ 437
G+QVPPAELE +L +HP+I DAAV+ D+ AG++P+AFIVR GS +TE ++ FVAK+
Sbjct: 189 GFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKE 368
Query: 438 VAPYKKVRRVAFVSAIPKSPAGKILRREL 524
V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 369 VVFYKKIHKVFFTESIPKNPSGKILRKDL 455
>gb|CX606247.1|CX606247 ANR1_2_A04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_2_A04_A002 3', mRNA sequence
Length = 632
Score = 171 bits (369), Expect(2) = 1e-053
Identities = 68/111 (61%), Positives = 87/111 (78%)
Frame = +3 / +3
Query: 63 VLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKE 242
+LGP + GEL++RGP VM GY + EAT T+D++GWL+TGD+ Y++ +G YIVDRLKE
Sbjct: 72 LLGPMETGELYIRGPQVMAGYHNNPEATRETIDADGWLRTGDIAYYDREGYFYIVDRLKE 251
Query: 243 LIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGS 395
LIK KG+QV PAELE IL +HP I DAAVIP PDE AG++P AF+V KP +
Sbjct: 252 LIKTKGFQVAPAELEAILLTHPKIADAAVIPSPDERAGEVPKAFVVAKPNA 404
Score = 59.7 bits (124), Expect(2) = 1e-053
Identities = 26/44 (59%), Positives = 34/44 (77%)
Frame = +3 / +3
Query: 399 LTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE 530
L E +VMDFVA +VA +K++ V FV AIPK+ +GKILRR+L E
Sbjct: 411 LAEAEVMDFVAGKVAHFKRLHFVEFVEAIPKTSSGKILRRDLKE 542
>gb|CF758077.1|CF758077 DSAF1_27_A03.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_27_A03_A011 3', mRNA sequence
Length = 532
Score = 203 bits (438), Expect = 2e-051
Identities = 74/85 (87%), Positives = 78/85 (91%)
Frame = -1 / -3
Query: 566 TSKLXGTHGHGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 387
TSKL G HGHG LYKLPPQDLPSRRFGNCRNKGHST+FLV CDLFSHEIHDLLLGKV* W
Sbjct: 257 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGKV*AW 78
Query: 386 FPHYKSHWELPGVFVWIRNNCCVHD 312
FPHYKSHW LP +FVW+RNNCC+HD
Sbjct: 77 FPHYKSHW*LPDIFVWVRNNCCIHD 3
Score = 182 bits (392), Expect = 5e-045
Identities = 81/86 (94%), Positives = 82/86 (95%)
Frame = +3 / +3
Query: 312 IMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPK 491
IMDAAVIPYPDED GQLPMAFIVRKPGSNLT+QQVMDFVAKQVAPYKKVRRVAFVSAIPK
Sbjct: 3 IMDAAVIPYPDEDVGQLPMAFIVRKPGSNLTKQQVMDFVAKQVAPYKKVRRVAFVSAIPK 182
Query: 492 SPAGKILRRELVEXAVSMGTXKL*SL 569
SPAGKILRRELVE AVSM T KL*SL
Sbjct: 183 SPAGKILRRELVEQAVSMVTSKL*SL 260
Score = 163 bits (351), Expect = 2e-039
Identities = 65/71 (91%), Positives = 68/71 (95%)
Frame = +2 / +2
Query: 356 ATPNGFYSEETRVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGACRAX 535
AT NGFYSEETR+KPY+ATSHGFRG*TGRT+QES SSGLCFCNSQIACWEDLAAGACRA
Sbjct: 47 ATTNGFYSEETRLKPYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAG 226
Query: 536 RVHGYLQALKF 568
RVHGYLQALKF
Sbjct: 227 RVHGYLQALKF 259
Score = 160 bits (343), Expect = 3e-038
Identities = 68/78 (87%), Positives = 70/78 (89%)
Frame = -2 / -1
Query: 586 DVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 407
D + KLQSL V MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 277 DFQASNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 98
Query: 406 SVRFDPGFLTIKAIGSCP 353
VRF+PGFLTIKAIGSCP
Sbjct: 97 LVRFEPGFLTIKAIGSCP 44
Score = 124 bits (266), Expect = 1e-027
Identities = 50/59 (84%), Positives = 50/59 (84%)
Frame = +1 / +1
Query: 316 WTQQLFLIQTKTPGNSQWLL**GNQGQTLPSNKSWISWLNRSHPTRKFVEWPLFLQFPN 492
W QQLF QTK GN QWLL**GNQ QTLPSNKSWISWLNRSH TRK VEWPLFLQFPN
Sbjct: 7 WMQQLFRTQTKMSGNYQWLL**GNQAQTLPSNKSWISWLNRSHRTRKSVEWPLFLQFPN 183
>gb|CW078695.1|CW078695 104_396_10898313_114_31923_153 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10898313, DNA
sequence
Length = 767
Score = 142 bits (305), Expect(2) = 4e-051
Identities = 61/109 (55%), Positives = 76/109 (69%)
Frame = +3 / +3
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG + +LE K VDP TG L GE+ VR VM+GY E T +T+D+ GWL T
Sbjct: 132 SVGFILPNLEVKFVDPDTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGWLHT 311
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAV 329
GD+ Y ++DG ++IVDR+KELIKYKG+QV PAELE IL SHP + DAAV
Sbjct: 312 GDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 458
Score = 80.8 bits (170), Expect(2) = 4e-051
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3 / +2
Query: 339 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRR 518
PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R + FV AIPKS +GKILRR
Sbjct: 545 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 724
Query: 519 EL 524
+L
Sbjct: 725 QL 730
>gb|CN145355.1|CN145355 WOUND1_28_A03.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_28_A03_A002 5', mRNA sequence
Length = 682
Score = 200 bits (431), Expect = 2e-050
Identities = 78/144 (54%), Positives = 109/144 (75%)
Frame = +3 / +3
Query: 27 LEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNE 206
+E KIVDP T E LG Q GE+ +RG +MKGY+ D EAT T+D +GWL TGD+ Y ++
Sbjct: 249 VELKIVDPDTSESLGRNQPGEICIRGEQIMKGYLNDPEATKNTIDKDGWLHTGDIGYVDD 428
Query: 207 DGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRK 386
D ++IVDRLKE+IKYKG+QVPPAE+E +L +HP+I DAAV+ DE AG++P+AFI++
Sbjct: 429 DDEIFIVDRLKEIIKYKGFQVPPAEVEALLITHPEIRDAAVVSMKDELAGEVPVAFIIQS 608
Query: 387 PGSNLTEQQVMDFVAKQVAPYKKV 458
GS ++E ++ FVAK+V YK++
Sbjct: 609 EGSEISENEIKQFVAKEVVFYKRI 680
>gb|CN129749.1|CN129749 RHOH1_37_E03.b1_A002 Acid- and alkaline-treated roots Sorghum
bicolor cDNA clone RHOH1_37_E03_A002 3', mRNA sequence
Length = 850
Score = 137 bits (293), Expect(2) = 4e-050
Identities = 54/108 (50%), Positives = 78/108 (72%)
Frame = +3 / +2
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G + + E KIVDP TG+ L GE+ +RG +MKGY+ + +AT ++D++GWL TGD
Sbjct: 305 GTVVRNAELKIVDPDTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHTGD 484
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 332
+ + ++D ++IVDRLKE+IKYKG QV PAE+E +L +HP I DAAV+
Sbjct: 485 VGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 628
Score = 82.6 bits (174), Expect(2) = 4e-050
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +3 / +2
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 521
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P+GKILR+E
Sbjct: 641 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 820
Query: 522 L 524
L
Sbjct: 821 L 823
>gb|CD229384.1|CD229384 CCC1_15_E01.b1_A007 Callus culture/cell suspension Sorghum bicolor
cDNA clone CCC1_15_E01_A007 3', mRNA sequence
Length = 613
Score = 137 bits (293), Expect(2) = 4e-050
Identities = 54/108 (50%), Positives = 78/108 (72%)
Frame = +3 / +1
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G + + E KIVDP TG+ L GE+ +RG +MKGY+ + +AT ++D++GWL TGD
Sbjct: 73 GTVVRNAELKIVDPDTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHTGD 252
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 332
+ + ++D ++IVDRLKE+IKYKG QV PAE+E +L +HP I DAAV+
Sbjct: 253 VGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADAAVV 396
Score = 82.6 bits (174), Expect(2) = 4e-050
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +3 / +1
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 521
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P+GKILR+E
Sbjct: 409 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 588
Query: 522 L 524
L
Sbjct: 589 L 591
>gb|BE362940.2|BE362940 DG1_91_B11.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 440
Score = 198 bits (426), Expect = 1e-049
Identities = 78/121 (64%), Positives = 101/121 (83%)
Frame = +3 / +1
Query: 165 EGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPD 344
+GWL TGDL YF+E G L++VDRLKELIKYKG+Q+ PAELE +L SHP+I+DAAVIPYPD
Sbjct: 34 QGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQIAPAELEGLLLSHPEILDAAVIPYPD 213
Query: 345 EDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
+AG++P+A++VR P S+L E V F+ KQVA YK++R+V FV ++PKS AGKILRREL
Sbjct: 214 PEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQVAHYKRLRKVKFVDSVPKSAAGKILRREL 393
Query: 525 V 527
+
Sbjct: 394 I 396
>gb|BZ629316.1|BZ629316 ih65e07.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih65e07 5', DNA sequence
Length = 668
Score = 135 bits (289), Expect(2) = 5e-049
Identities = 57/100 (57%), Positives = 70/100 (70%)
Frame = +3 / +2
Query: 30 EAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNED 209
E K VDP TG L GE+ VR VM+GY E T +T+D+ GWL TGD+ Y ++D
Sbjct: 2 EVKFVDPDTGRSLPKNTPGEICVRSQAVMQGYYRRKEETESTIDAAGWLHTGDVGYIDDD 181
Query: 210 GLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAV 329
G ++IVDR+KELIKYKG+QV PAELE IL SHP + DAAV
Sbjct: 182 GDVFIVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 301
Score = 80.8 bits (170), Expect(2) = 5e-049
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3 / +1
Query: 339 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRR 518
PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R + FV AIPKS +GKILRR
Sbjct: 388 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 567
Query: 519 EL 524
+L
Sbjct: 568 QL 573
>gb|CW146571.1|CW146571 104_539_11139064_116_34991_056 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11139064, DNA
sequence
Length = 696
Score = 101 bits (215), Expect(3) = 4e-047
Identities = 37/50 (74%), Positives = 45/50 (90%)
Frame = +3 / -1
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
GYV D+EA A++ DSEGWL+TGDLCY ++DG L++VDRLKELIKYKGYQV
Sbjct: 582 GYVADEEANASSFDSEGWLRTGDLCYIDQDGFLFVVDRLKELIKYKGYQV 433
Score = 83.1 bits (175), Expect(3) = 4e-047
Identities = 32/52 (61%), Positives = 43/52 (82%)
Frame = +3 / -2
Query: 327 VIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSA 482
V YP E+AGQ+P+A +VR+PGS +TE QV+D VAK+VAPYKK+R+V FV +
Sbjct: 158 VYRYPHEEAGQIPVALVVRQPGSKVTEAQVIDHVAKRVAPYKKIRKVLFVDS 3
Score = 43.7 bits (89), Expect(3) = 4e-047
Identities = 17/28 (60%), Positives = 22/28 (78%)
Frame = +3 / -2
Query: 252 YKGYQVPPAELEHILNSHPDIMDAAVIP 335
Y QVPPAELE +L S P+++DAAV+P
Sbjct: 335 YLSLQVPPAELELVLQSLPEVIDAAVMP 252
>gb|BI211898.1|BI211898 IP1_62_G05.g1_A002 Immature pannicle 1 (IP1) Sorghum bicolor cDNA,
mRNA sequence
Length = 679
Score = 187 bits (403), Expect = 2e-046
Identities = 78/138 (56%), Positives = 106/138 (76%)
Frame = +3 / +1
Query: 111 VMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEH 290
VM+GY E T +T+D+ GWL TGD+ Y ++DG ++IVDR+KELIKYKG+QV PAELE
Sbjct: 10 VMQGYYRRKEETESTIDAAGWLHTGDVGYIDDDGDVFIVDRIKELIKYKGFQVAPAELEA 189
Query: 291 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 470
IL SHP + DAAV PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R +
Sbjct: 190 ILLSHPSVEDAAVFGLPDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLR 369
Query: 471 FVSAIPKSPAGKILRREL 524
FV AIPKS +GKILRR+L
Sbjct: 370 FVDAIPKSVSGKILRRQL 423
>gb|BE597274.1|BE597274 PI1_70_C05.g1_A002 Pathogen induced 1 (PI1) Sorghum bicolor cDNA,
mRNA sequence
Length = 644
Score = 135 bits (290), Expect(2) = 7e-045
Identities = 53/108 (49%), Positives = 78/108 (72%)
Frame = +3 / +3
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGD 188
G + + E KIVDP TG+ L GE+ +RG +MKGY+ + +AT ++D++GWL TGD
Sbjct: 111 GTVVRNAELKIVDPDTGKSLARNLPGEICIRGQQIMKGYLNNPDATKNSIDADGWLHTGD 290
Query: 189 LCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 332
+ + ++D ++IVDRLKE+IKYKG QV PAE+E +L +HP I DA+V+
Sbjct: 291 VGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIADASVV 434
Score = 66.6 bits (139), Expect(2) = 7e-045
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +3 / +3
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGK 506
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P +
Sbjct: 447 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPRAR 611
>gb|CD429206.1|CD429206 ETH1_3_C09.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_3_C09_A002 3', mRNA sequence
Length = 652
Score = 111 bits (236), Expect(2) = 3e-042
Identities = 42/78 (53%), Positives = 61/78 (78%)
Frame = +3 / +2
Query: 99 RGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPA 278
RG +MKGY+ + +AT ++D++GWL TGD+ + ++D ++IVDRLKE+IKYKG QV PA
Sbjct: 2 RGQQIMKGYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPA 181
Query: 279 ELEHILNSHPDIMDAAVI 332
E+E +L +HP I DAAV+
Sbjct: 182 EIEALLITHPSIADAAVV 235
Score = 82.6 bits (174), Expect(2) = 3e-042
Identities = 32/61 (52%), Positives = 45/61 (73%)
Frame = +3 / +2
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 521
+ + G++P+AF+ + GS L+E V FVAK+V YKKVR V F+ IPK+P+GKILR+E
Sbjct: 248 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEVIYYKKVREVIFIDKIPKAPSGKILRKE 427
Query: 522 L 524
L
Sbjct: 428 L 430
>gb|CW128046.1|CW128046 104_509_11113781_116_34744_023 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11113781, DNA
sequence
Length = 650
Score = 110 bits (235), Expect(2) = 1e-041
Identities = 44/66 (66%), Positives = 54/66 (81%)
Frame = +3 / -1
Query: 138 EATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIM 317
EATA T+D EGWL TGD+ Y ++D ++IVDRLKELIKYKG+QV PAELE +L +HP I
Sbjct: 632 EATAKTIDDEGWLHTGDMGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHPSIA 453
Query: 318 DAAVIP 335
DAAV+P
Sbjct: 452 DAAVVP 435
Score = 81.3 bits (171), Expect(2) = 1e-041
Identities = 30/61 (49%), Positives = 46/61 (75%)
Frame = +3 / -3
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRE 521
D+ G++P+AF+V G +TE ++ +VAKQV YK++ +V FV AIPK+P+GKILR++
Sbjct: 318 DDSCGEIPVAFVVTSGGYEMTEDEIKQYVAKQVVFYKRLHKVFFVEAIPKAPSGKILRKD 139
Query: 522 L 524
L
Sbjct: 138 L 136
>gb|BE359084.1|BE359084 DG1_38_H02.g1_A002 Dark Grown 1 (DG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 384
Score = 166 bits (356), Expect = 5e-040
Identities = 67/117 (57%), Positives = 92/117 (78%)
Frame = +3 / +3
Query: 174 LKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDA 353
L TGD+ Y ++D ++IVDRLKE+IKYKG QVPPAELE +L +HP+I DAAV+ D+ A
Sbjct: 3 LHTGDIGYVDDDDEIFIVDRLKEIIKYKGLQVPPAELEALLITHPEIKDAAVVSMKDDLA 182
Query: 354 GQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
G++P+AFIVR GS +TE ++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 183 GEIPVAFIVRTEGSEVTEDEIKQFVAKEVVFYKKIHKVFFSESIPKNPSGKILRKDL 353
>gb|CW194292.1|CW194292 104_617_11180020_148_36790_008 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180020, DNA
sequence
Length = 721
Score = 110 bits (235), Expect(3) = 5e-039
Identities = 42/70 (60%), Positives = 57/70 (81%)
Frame = +3 / +2
Query: 123 YVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNS 302
Y+ D E+T T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L +
Sbjct: 2 YLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLIT 181
Query: 303 HPDIMDAAVI 332
HP+I DAAV+
Sbjct: 182 HPEIKDAAVV 211
Score = 47.3 bits (97), Expect(3) = 5e-039
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3 / +2
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
D+ AG++P+AFIVR GS +TE ++ FVAK+V
Sbjct: 317 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 415
Score = 46.0 bits (94), Expect(3) = 5e-039
Identities = 18/33 (54%), Positives = 25/33 (75%)
Frame = +3 / +2
Query: 426 VAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
V QV YKK+ +V F +IPK+P+GKILR++L
Sbjct: 575 VMLQVVFYKKIHKVFFTESIPKNPSGKILRKDL 673
>gb|CF429879.1|CF429879 PH1_25_E11.b1_A002 Phosphorous-deficient seedlings Sorghum bicolor
cDNA clone PH1_25_E11_A002 3', mRNA sequence
Length = 591
Score = 149 bits (319), Expect = 6e-035
Identities = 59/99 (59%), Positives = 80/99 (80%)
Frame = +3 / +2
Query: 228 DRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTE 407
DRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+ D+ AG++P+AFIVR GS +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 408 QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 182 DEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 298
>gb|CD232716.1|CD232716 SS1_1_H12.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_1_H12_A012 3', mRNA sequence
Length = 559
Score = 148 bits (317), Expect = 1e-034
Identities = 59/99 (59%), Positives = 80/99 (80%)
Frame = +3 / +2
Query: 228 DRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTE 407
DRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+ D+ AG++P+AFIVR GS +TE
Sbjct: 2 DRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVVSMKDDLAGEIPVAFIVRTEGSEVTE 181
Query: 408 QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
++ FVAK+V YKK+ +V F +IPK+P+GKILR++L
Sbjct: 182 GEIKQFVAKEVVFYKKIHKVFFTESIPKNPSGKILRKDL 298
>gb|CW073480.1|CW073480 104_335_10779929_114_31363_329 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10779929, DNA
sequence
Length = 743
Score = 97.3 bits (206), Expect(3) = 6e-034
Identities = 37/67 (55%), Positives = 53/67 (79%)
Frame = +3 / +3
Query: 138 EATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIM 317
+AT ++D++GWL TGD+ + ++D ++IVDRLKE+IKYKG QV PAE+E +L +HP I
Sbjct: 12 DATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLITHPSIA 191
Query: 318 DAAVIPY 338
DAAV+ Y
Sbjct: 192 DAAVVGY 212
Score = 49.6 bits (102), Expect(3) = 6e-034
Identities = 20/30 (66%), Positives = 24/30 (80%)
Frame = +3 / +3
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
QV YKKVR V F+ IPK+P+GKILR+EL
Sbjct: 570 QVIYYKKVREVIFIDKIPKAPSGKILRKEL 659
Score = 40.0 bits (81), Expect(3) = 6e-034
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3 / +3
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+ + G++P+AF+ + GS L+E V FVAK+V
Sbjct: 336 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEV 434
>gb|CL190993.1|CL190993 104_409_10906471_114_32488_022 Sorghum methylation-filtered library
(LibID: 104) Sorghum bicolor genomic clone 10906471, DNA
sequence
Length = 759
Score = 116 bits (247), Expect(2) = 6e-034
Identities = 44/71 (61%), Positives = 58/71 (81%)
Frame = +3 / -3
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GY+ D EAT T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L
Sbjct: 568 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 389
Query: 300 SHPDIMDAAVI 332
+HP+I DAAV+
Sbjct: 388 THPEIKDAAVV 356
Score = 49.6 bits (102), Expect(2) = 6e-034
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3 / -2
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAP 446
DE AG++P+AFI+R GS ++E ++ FVAK+V P
Sbjct: 242 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEVIP 138
>gb|CW331181.1|CW331181 104_828_11480770_148_36025_041 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11480770, DNA
sequence
Length = 694
Score = 116 bits (247), Expect(2) = 6e-034
Identities = 44/71 (61%), Positives = 58/71 (81%)
Frame = +3 / +3
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GY+ D EAT T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L
Sbjct: 111 GYLNDPEATKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLI 290
Query: 300 SHPDIMDAAVI 332
+HP+I DAAV+
Sbjct: 291 THPEIKDAAVV 323
Score = 49.6 bits (102), Expect(2) = 6e-034
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3 / +2
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAP 446
DE AG++P+AFI+R GS ++E ++ FVAK+V P
Sbjct: 437 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEVIP 541
>gb|CW134050.1|CW134050 104_518_11117099_148_34816_046 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11117099, DNA
sequence
Length = 664
Score = 115 bits (246), Expect(2) = 4e-033
Identities = 44/76 (57%), Positives = 60/76 (78%)
Frame = +3 / -1
Query: 105 PVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAEL 284
P+ GY+ D E+T T+D +GWL TGD+ Y ++D ++IVDRLKE+IKYKG+QVPPAEL
Sbjct: 559 PIDHSGYLNDLESTKNTIDKDGWLHTGDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAEL 380
Query: 285 EHILNSHPDIMDAAVI 332
E +L +HP+I DAAV+
Sbjct: 379 EALLITHPEIKDAAVV 332
Score = 47.3 bits (97), Expect(2) = 4e-033
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3 / -1
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
D+ AG++P+AFIVR GS +TE ++ FVAK+V
Sbjct: 226 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 128
>gb|CW362994.1|CW362994 fsbb001f034f02k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f034f02, DNA
sequence
Length = 687
Score = 143 bits (306), Expect = 4e-033
Identities = 60/109 (55%), Positives = 76/109 (69%)
Frame = +3 / -1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYVGDDEATAATVDSEGWLKT 182
SVG + +LE K VDP TG L GE+ VR VM+GY E T T+D++GWL T
Sbjct: 450 SVGFILPNLEVKFVDPDTGRSLPKNTAGEICVRSQAVMQGYYRKKEETERTIDAKGWLHT 271
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAV 329
GD+ Y ++DG +++VDR+KELIKYKG+QV PAELE IL SHP + DAAV
Sbjct: 270 GDVGYIDDDGDVFVVDRIKELIKYKGFQVAPAELEAILLSHPSVEDAAV 124
>gb|CD235658.1|CD235658 SS1_37_F06.b1_A012 Salt-stressed seedlings Sorghum bicolor cDNA
clone SS1_37_F06_A012 3', mRNA sequence
Length = 515
Score = 136 bits (292), Expect = 3e-031
Identities = 55/96 (57%), Positives = 75/96 (78%)
Frame = +3 / +3
Query: 237 KELIKYKGYQVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQV 416
KELIK+KG+QVPPAELE +L +HP I DAAV+P D+ AG++P+AF+VR S++ E +
Sbjct: 3 KELIKFKGFQVPPAELEALLIAHPSIADAAVVPQKDDAAGEVPVAFVVRAADSDIAEDAI 182
Query: 417 MDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRREL 524
+FV+KQV YK++ +V F +IPKS +GKILRREL
Sbjct: 183 KEFVSKQVVFYKRLHKVYFTPSIPKSASGKILRREL 290
>gb|CW071495.1|CW071495 104_323_10591543_114_30471 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10591543, DNA
sequence
Length = 740
Score = 116 bits (249), Expect(2) = 6e-031
Identities = 46/72 (63%), Positives = 58/72 (80%)
Frame = +3 / +3
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GY+ + EATA T+D EGWL TGD+ Y ++D ++IVDRLKELIKYKG+QV PAELE +L
Sbjct: 420 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 599
Query: 300 SHPDIMDAAVIP 335
+HP I DAAV+P
Sbjct: 600 AHPSIADAAVVP 635
Score = 40.9 bits (83), Expect(2) = 6e-031
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3 / +2
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
G + + E KIVDP TG L Q GE+ +RG +MKG
Sbjct: 182 GTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 295
>gb|CW077966.1|CW077966 104_386_10894698_116_31912_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 739
Score = 116 bits (249), Expect(2) = 6e-031
Identities = 46/72 (63%), Positives = 58/72 (80%)
Frame = +3 / +1
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GY+ + EATA T+D EGWL TGD+ Y ++D ++IVDRLKELIKYKG+QV PAELE +L
Sbjct: 484 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 663
Query: 300 SHPDIMDAAVIP 335
+HP I DAAV+P
Sbjct: 664 AHPSIADAAVVP 699
Score = 40.9 bits (83), Expect(2) = 6e-031
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3 / +3
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
G + + E KIVDP TG L Q GE+ +RG +MKG
Sbjct: 246 GTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 359
>gb|CW077967.1|CW077967 104_386_10894698_148_31911_378 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10894698, DNA
sequence
Length = 748
Score = 116 bits (249), Expect(2) = 6e-031
Identities = 46/72 (63%), Positives = 58/72 (80%)
Frame = +3 / -1
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GY+ + EATA T+D EGWL TGD+ Y ++D ++IVDRLKELIKYKG+QV PAELE +L
Sbjct: 394 GYLNNPEATAKTIDDEGWLHTGDIGYVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLI 215
Query: 300 SHPDIMDAAVIP 335
+HP I DAAV+P
Sbjct: 214 AHPSIADAAVVP 179
Score = 40.9 bits (83), Expect(2) = 6e-031
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3 / -3
Query: 9 GKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKG 122
G + + E KIVDP TG L Q GE+ +RG +MKG
Sbjct: 632 GTVVRNAELKIVDPDTGLSLRRNQPGEICIRGKQLMKG 519
>gb|CW493569.1|CW493569 fsbb001f284g08f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f284g08, DNA
sequence
Length = 724
Score = 83.5 bits (176), Expect(3) = 7e-031
Identities = 32/50 (64%), Positives = 43/50 (86%)
Frame = +3 / -2
Query: 183 GDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 332
GD+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+
Sbjct: 723 GDIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 574
Score = 49.6 bits (102), Expect(3) = 7e-031
Identities = 18/35 (51%), Positives = 27/35 (77%)
Frame = +3 / -1
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAP 446
DE AG++P+AFI+R GS ++E ++ FVAK+V P
Sbjct: 460 DELAGEVPVAFIIRSEGSEISENEIKQFVAKEVIP 356
Score = 43.2 bits (88), Expect(3) = 7e-031
Identities = 15/26 (57%), Positives = 22/26 (84%)
Frame = +3 / -2
Query: 447 YKKVRRVAFVSAIPKSPAGKILRREL 524
YK++ RV F +IPK+P+GKILR++L
Sbjct: 126 YKRINRVFFTDSIPKNPSGKILRKDL 49
>gb|CW380206.1|CW380206 fsbb001f059o07f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f059o07, DNA
sequence
Length = 683
Score = 80.8 bits (170), Expect(3) = 1e-030
Identities = 30/50 (60%), Positives = 41/50 (82%)
Frame = +3 / -1
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
GY+ D EATA T+D +GWL TGD+ Y ++D ++IVDR+KELIK+KG+QV
Sbjct: 344 GYLNDPEATARTIDVDGWLHTGDIGYVDDDDEVFIVDRVKELIKFKGFQV 195
Score = 47.8 bits (98), Expect(3) = 1e-030
Identities = 20/42 (47%), Positives = 26/42 (61%)
Frame = +3 / -1
Query: 3 SVGKLASHLEAKIVDPSTGEVLGPGQRGELWVRGPVVMKGYV 128
S G + + E K+VDP TG LG GE+ +RGP +MKG V
Sbjct: 575 SCGTVVRNAELKVVDPDTGLSLGRNLPGEICIRGPQIMKGTV 450
Score = 43.7 bits (89), Expect(3) = 1e-030
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3 / -3
Query: 264 QVPPAELEHILNSHPDIMDAAVIP 335
QVPPAELE +L +HP I DAAV+P
Sbjct: 87 QVPPAELEALLIAHPSIADAAVVP 16
>gb|CF757766.1|CF757766 DSAF1_22_A08.g1_A011 Drought-stressed after flowering Sorghum
bicolor cDNA clone DSAF1_22_A08_A011 3', mRNA sequence
Length = 461
Score = 133 bits (285), Expect = 3e-030
Identities = 52/61 (85%), Positives = 54/61 (88%)
Frame = -1 / -1
Query: 566 TSKLXGTHGHGXLYKLPPQDLPSRRFGNCRNKGHSTNFLVGCDLFSHEIHDLLLGKV*PW 387
TSKL G HGHG LYKLPPQDLPSRRFGNCRNKGHST+FLV CDLFSHEIHDLLLG+ P
Sbjct: 185 TSKLGGNHGHGLLYKLPPQDLPSRRFGNCRNKGHSTDFLVRCDLFSHEIHDLLLGRFEPG 6
Query: 386 F 384
F
Sbjct: 5 F 3
Score = 132 bits (282), Expect = 8e-030
Identities = 52/60 (86%), Positives = 56/60 (93%)
Frame = +2 / +2
Query: 389 RVKPYRATSHGFRG*TGRTLQESSSSGLCFCNSQIACWEDLAAGACRAXRVHGYLQALKF 568
+ + Y+ATSHGFRG*TGRT+QES SSGLCFCNSQIACWEDLAAGACRA RVHGYLQALKF
Sbjct: 8 QAQTYQATSHGFRG*TGRTVQESPSSGLCFCNSQIACWEDLAAGACRAGRVHGYLQALKF 187
Score = 121 bits (259), Expect = 1e-026
Identities = 53/62 (85%), Positives = 54/62 (87%)
Frame = -2 / -2
Query: 586 DVSINFKLQSLXVPMDTACSTSSRRKIFPAGDLGIAETKATRRTFL*GATCLATKSMTCC 407
D + KLQSL V MDTACSTSSRRKIFPAGDLGIAETKATRRTFL GATCLATKSMTCC
Sbjct: 205 DFQASNKLQSLEVTMDTACSTSSRRKIFPAGDLGIAETKATRRTFLYGATCLATKSMTCC 26
Query: 406 SV 401
V
Sbjct: 25 LV 20
Score = 113 bits (241), Expect = 4e-024
Identities = 52/56 (92%), Positives = 53/56 (94%)
Frame = +3 / +3
Query: 402 TEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVSMGTXKL*SL 569
T+QQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVE AVSM T KL*SL
Sbjct: 21 TKQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEQAVSMVTSKL*SL 188
>gb|CN139882.1|CN139882 OX1_24_E09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_24_E09_A002 5', mRNA sequence
Length = 781
Score = 97.7 bits (207), Expect(2) = 3e-028
Identities = 38/64 (59%), Positives = 52/64 (81%)
Frame = +3 / +3
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILR 515
+PD +AG++P+A++VR P S+LTE V F+ KQVA YKK+RRV FV ++PKS +GKILR
Sbjct: 120 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVTFVDSVPKSASGKILR 299
Query: 516 RELV 527
REL+
Sbjct: 300 RELI 311
Score = 48.7 bits (100), Expect(2) = 3e-028
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3 / +1
Query: 255 KGYQVPPAELEHILNSHPDIMDAAVIPY 338
KG+Q+ P ELE +L SHP+I+DA VIPY
Sbjct: 22 KGFQIAPFELEGLLLSHPEILDAVVIPY 105
>gb|CW327532.1|CW327532 104_823_11478800_116_35982_028 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11478800, DNA
sequence
Length = 686
Score = 63.4 bits (132), Expect(3) = 3e-027
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +3 / +2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PD + GQ PMA++VRK GSNL+E++VM+FVAKQV
Sbjct: 188 FPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQV 292
Score = 60.6 bits (126), Expect(3) = 3e-027
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / +3
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
QVAPYKKVR+VAFV+ IPK+ +GKILR++L++ A S
Sbjct: 444 QVAPYKKVRKVAFVTEIPKNASGKILRKDLIKLATS 551
Score = 40.0 bits (81), Expect(3) = 3e-027
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3 / +1
Query: 264 QVPPAELEHILNSHPDIMDAAVIP 335
QVPPAELE +L +H +I D AVIP
Sbjct: 31 QVPPAELEALLLTHSEIQDVAVIP 102
>gb|CW029877.1|CW029877 104_257_10499927_116_30402 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10499927, DNA
sequence
Length = 812
Score = 63.4 bits (132), Expect(3) = 4e-027
Identities = 23/35 (65%), Positives = 31/35 (88%)
Frame = +3 / -3
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+PD + GQ PMA++VRK GSNL+E++VM+FVAKQV
Sbjct: 573 FPDREVGQFPMAYVVRKKGSNLSEREVMEFVAKQV 469
Score = 60.6 bits (126), Expect(3) = 4e-027
Identities = 24/36 (66%), Positives = 32/36 (88%)
Frame = +3 / -1
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVS 542
QVAPYKKVR+VAFV+ IPK+ +GKILR++L++ A S
Sbjct: 317 QVAPYKKVRKVAFVTEIPKNASGKILRKDLIKLATS 210
Score = 40.0 bits (81), Expect(3) = 4e-027
Identities = 16/24 (66%), Positives = 19/24 (79%)
Frame = +3 / -2
Query: 264 QVPPAELEHILNSHPDIMDAAVIP 335
QVPPAELE +L +H +I D AVIP
Sbjct: 730 QVPPAELEALLLTHSEIQDVAVIP 659
>gb|CN152126.1|CN152126 WOUND1_80_A04.b1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_80_A04_A002 3', mRNA sequence
Length = 681
Score = 122 bits (262), Expect = 5e-027
Identities = 48/79 (60%), Positives = 65/79 (82%)
Frame = +3 / +2
Query: 291 ILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVA 470
+L SHP+I+DA VIP+PD +AG++P+A++VR P S+LTE V F+ KQVA YKK+RRV
Sbjct: 5 LLLSHPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVT 184
Query: 471 FVSAIPKSPAGKILRRELV 527
FV ++PKS +GKILRREL+
Sbjct: 185 FVDSVPKSASGKILRRELI 241
>gb|CW445621.1|CW445621 fsbb001f170n20k0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f170n20, DNA
sequence
Length = 679
Score = 68.0 bits (142), Expect(3) = 7e-027
Identities = 26/35 (74%), Positives = 31/35 (88%)
Frame = +3 / -1
Query: 165 EGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
+GWL TGDL YF+E G L++VDRLKELIKYKG+QV
Sbjct: 634 QGWLHTGDLGYFDERGQLHVVDRLKELIKYKGFQV 530
Score = 50.1 bits (103), Expect(3) = 7e-027
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3 / -2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
YPD +AG++P+A++VR P S+L E V F+ KQV
Sbjct: 207 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 103
Score = 44.6 bits (91), Expect(3) = 7e-027
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3 / -1
Query: 261 YQVPPAELEHILNSHPDIMDAAVIP 335
+Q+ PAELE +L SHP+I+DAAVIP
Sbjct: 361 WQIAPAELEGLLLSHPEILDAAVIP 287
>gb|CW345534.1|CW345534 104_848_11488543_148_36210_022 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11488543, DNA
sequence
Length = 632
Score = 103 bits (220), Expect(2) = 8e-027
Identities = 39/73 (53%), Positives = 57/73 (78%)
Frame = +3 / +3
Query: 120 GYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILN 299
GY+ + +AT ++D++GWL TGD+ + ++D ++IVDRLKE+IKYKG QV PAE+E +L
Sbjct: 15 GYLNNPDATKNSIDADGWLHTGDVGFVDDDDEIFIVDRLKEIIKYKGLQVAPAEIEALLI 194
Query: 300 SHPDIMDAAVIPY 338
+HP I DAAV+ Y
Sbjct: 195 THPSIADAAVVGY 233
Score = 40.0 bits (81), Expect(2) = 8e-027
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +3 / +3
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
+ + G++P+AF+ + GS L+E V FVAK+V
Sbjct: 357 EPEIGEIPVAFVAKAKGSELSEDDVKQFVAKEV 455
>gb|CD424257.1|CD424257 SA1_4_H11.b1_A002 Salicylic acid-treated seedlings Sorghum bicolor
cDNA clone SA1_4_H11_A002 3', mRNA sequence
Length = 584
Score = 119 bits (254), Expect = 6e-026
Identities = 46/75 (61%), Positives = 62/75 (82%)
Frame = +3 / +1
Query: 303 HPDIMDAAVIPYPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSA 482
HP+I+DA VIP+PD +AG++P+A++VR P S+LTE V F+ KQVA YKK+RRV FV +
Sbjct: 1 HPEILDAVVIPFPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVAYYKKLRRVPFVDS 180
Query: 483 IPKSPAGKILRRELV 527
+PKS +GKILRREL+
Sbjct: 181 VPKSASGKILRRELI 225
>gb|CW208270.1|CW208270 104_637_11188585_116_37043_003 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11188585, DNA
sequence
Length = 625
Score = 80.8 bits (170), Expect(2) = 7e-026
Identities = 33/62 (53%), Positives = 49/62 (79%)
Frame = +3 / +3
Query: 339 PDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRR 518
PDE+AG++P + +VR+ G+ +E +M +VA++VA YKK+R + FV AIPKS +GKILRR
Sbjct: 183 PDEEAGEVPASCVVRRRGAPESEADMMAYVAERVASYKKLRLLRFVDAIPKSVSGKILRR 362
Query: 519 EL 524
+L
Sbjct: 363 QL 368
Score = 57.9 bits (120), Expect(2) = 7e-026
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3 / +1
Query: 234 LKELIKYKGYQVPPAELEHILNSHPDIMDAAV 329
+KELIKYKG+QV PAELE IL SHP + DAAV
Sbjct: 1 IKELIKYKGFQVAPAELEAILLSHPSVEDAAV 96
>gb|CW090128.1|CW090128 104_435_10949104_114_32612_050 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10949104, DNA
sequence
Length = 734
Score = 101 bits (215), Expect(2) = 5e-024
Identities = 44/101 (43%), Positives = 60/101 (59%)
Frame = +3 / -1
Query: 84 GELWVRGPVVMKGYVGDDEATAATVDSEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGY 263
GE+ RG VM GY+ DDEAT A + +GW TGD+ + DG L I DR K++I G
Sbjct: 707 GEIVSRGGCVMLGYLNDDEATKAAIREDGWFYTGDVGVMHPDGYLEIRDRSKDVIINAGE 528
Query: 264 QVPPAELEHILNSHPDIMDAAVIPYPDEDAGQLPMAFIVRK 386
+ E+E +L HP + +AAV+ PDE G+ P AF+ K
Sbjct: 527 NISSVEVESVLYDHPAVNEAAVVARPDELRGETPCAFVSLK 405
Score = 30.9 bits (61), Expect(2) = 5e-024
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +3 / -1
Query: 399 LTEQQVMDFVAKQVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVSMG 548
+T V+ + +++ Y R V F + +PK+ GKI + L A+ MG
Sbjct: 386 VTAADVIAWCRERMPQYMVPRTVVFHAELPKTSTGKIQKYVLRNLAMEMG 237
>gb|CW271688.1|CW271688 104_744_11403133_116_36221_063 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11403133, DNA
sequence
Length = 655
Score = 54.7 bits (113), Expect(3) = 5e-023
Identities = 25/48 (52%), Positives = 33/48 (68%)
Frame = +3 / -1
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELVEXAVSMGTXKL*SLKFI 578
QVA YK++R+V FV ++PKS AGKILRREL+ S ++ L FI
Sbjct: 175 QVAHYKRLRKVKFVDSVPKSAAGKILRRELIAQVRSSKL*RIDLLNFI 32
Score = 50.1 bits (103), Expect(3) = 5e-023
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +3 / -3
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
YPD +AG++P+A++VR P S+L E V F+ KQV
Sbjct: 467 YPDPEAGEVPIAYVVRSPKSSLAEVDVQKFIEKQV 363
Score = 44.6 bits (91), Expect(3) = 5e-023
Identities = 17/25 (68%), Positives = 22/25 (88%)
Frame = +3 / -2
Query: 261 YQVPPAELEHILNSHPDIMDAAVIP 335
+Q+ PAELE +L SHP+I+DAAVIP
Sbjct: 621 WQIAPAELEGLLLSHPEILDAAVIP 547
>gb|CW304120.1|CW304120 104_788_11465610_148_35698_065 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11465610, DNA
sequence
Length = 672
Score = 68.9 bits (144), Expect(3) = 5e-023
Identities = 25/36 (69%), Positives = 32/36 (88%)
Frame = +3 / +1
Query: 162 SEGWLKTGDLCYFNEDGLLYIVDRLKELIKYKGYQV 269
++GWL+TGD+ YF+ DG LYIV RLKE+IKYKG+QV
Sbjct: 187 NDGWLRTGDIAYFDFDGYLYIVGRLKEVIKYKGFQV 294
Score = 47.8 bits (98), Expect(3) = 5e-023
Identities = 18/30 (60%), Positives = 26/30 (86%)
Frame = +3 / +3
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVA 431
D++AG++P+AF+VRK GS L+ QVMD+VA
Sbjct: 582 DKEAGEIPVAFVVRKSGSGLSCTQVMDYVA 671
Score = 32.7 bits (65), Expect(3) = 5e-023
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3 / +2
Query: 264 QVPPAELEHILNSHPDIMDAAV 329
Q+ PA+LE IL HP I+D AV
Sbjct: 419 QIAPADLEAILIEHPGIVDVAV 484
>gb|CW034153.1|CW034153 104_264_10502381_115_30380 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10502381, DNA
sequence
Length = 541
Score = 80.8 bits (170), Expect(2) = 9e-023
Identities = 31/49 (63%), Positives = 42/49 (85%)
Frame = +3 / -2
Query: 186 DLCYFNEDGLLYIVDRLKELIKYKGYQVPPAELEHILNSHPDIMDAAVI 332
D+ Y ++D ++IVDRLKE+IKYKG+QVPPAELE +L +HP+I DAAV+
Sbjct: 540 DIGYVDDDDEIFIVDRLKEIIKYKGFQVPPAELEALLITHPEIKDAAVV 394
Score = 47.3 bits (97), Expect(2) = 9e-023
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +3 / -2
Query: 342 DEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQV 440
D+ AG++P+AFIVR GS +TE ++ FVAK+V
Sbjct: 288 DDLAGEIPVAFIVRTEGSEVTEDEIKQFVAKEV 190
>gb|CW220527.1|CW220527 104_655_11197397_116_37153_027 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11197397, DNA
sequence
Length = 664
Score = 54.7 bits (113), Expect(3) = 1e-022
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +3 / +2
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELV 527
QVA YKK+RRV FV ++PKS +GKILRREL+
Sbjct: 473 QVAYYKKLRRVTFVDSVPKSASGKILRRELI 565
Score = 50.6 bits (104), Expect(3) = 1e-022
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3 / +2
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVA 443
+PD +AG++P+A++VR P S+LTE V F+ KQV+
Sbjct: 200 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVS 307
Score = 42.8 bits (87), Expect(3) = 1e-022
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3 / +3
Query: 261 YQVPPAELEHILNSHPDIMDAAVIP 335
+Q+ PAELE +L SHP+I+DA VIP
Sbjct: 18 WQIAPAELEGLLLSHPEILDAVVIP 92
>gb|CW311232.1|CW311232 104_800_11470125_148_35757_085 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11470125, DNA
sequence
Length = 682
Score = 54.7 bits (113), Expect(3) = 1e-022
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +3 / +3
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELV 527
QVA YKK+RRV FV ++PKS +GKILRREL+
Sbjct: 489 QVAYYKKLRRVTFVDSVPKSASGKILRRELI 581
Score = 50.6 bits (104), Expect(3) = 1e-022
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3 / +3
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVA 443
+PD +AG++P+A++VR P S+LTE V F+ KQV+
Sbjct: 216 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVS 323
Score = 42.8 bits (87), Expect(3) = 1e-022
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3 / +1
Query: 261 YQVPPAELEHILNSHPDIMDAAVIP 335
+Q+ PAELE +L SHP+I+DA VIP
Sbjct: 34 WQIAPAELEGLLLSHPEILDAVVIP 108
>gb|CW194265.1|CW194265 104_617_11180005_148_36791_057 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11180005, DNA
sequence
Length = 706
Score = 54.7 bits (113), Expect(3) = 1e-022
Identities = 22/31 (70%), Positives = 27/31 (87%)
Frame = +3 / -1
Query: 435 QVAPYKKVRRVAFVSAIPKSPAGKILRRELV 527
QVA YKK+RRV FV ++PKS +GKILRREL+
Sbjct: 220 QVAYYKKLRRVTFVDSVPKSASGKILRRELI 128
Score = 50.6 bits (104), Expect(3) = 1e-022
Identities = 18/36 (50%), Positives = 28/36 (77%)
Frame = +3 / -1
Query: 336 YPDEDAGQLPMAFIVRKPGSNLTEQQVMDFVAKQVA 443
+PD +AG++P+A++VR P S+LTE V F+ KQV+
Sbjct: 493 FPDAEAGEVPIAYVVRSPVSSLTEVDVQKFIEKQVS 386
Score = 42.8 bits (87), Expect(3) = 1e-022
Identities = 16/25 (64%), Positives = 21/25 (84%)
Frame = +3 / -2
Query: 261 YQVPPAELEHILNSHPDIMDAAVIP 335
+Q+ PAELE +L SHP+I+DA VIP
Sbjct: 675 WQIAPAELEGLLLSHPEILDAVVIP 601
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 827,624,426
Number of Sequences: 832831
Number of extensions: 10493997
Number of successful extensions: 84976
Number of sequences better than 1.0e-020: 67
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 23762736400
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)