TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 1716207.2.2
(754 letters)
Database: Sorghum_nucl_with_EST.fasta
832,831 sequences; 491,359,669 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CD432106.1|CD432106 ETH1_26_A06.b1_A002 Ethylene-treated... 231 8e-065
gb|CD432203.1|CD432203 ETH1_26_A06.g1_A002 Ethylene-treated... 231 8e-065
gb|CF484027.1|CF484027 POL1_2_D10.g1_A002 Pollen Sorghum bi... 195 5e-054
gb|AW745353.1|AW745353 WS1_33_E12.b1_A002 Water-stressed 1 ... 192 3e-053
gb|AW679925.1|AW679925 WS1_33_E12.g1_A002 Water-stressed 1 ... 192 3e-053
gb|CN147613.1|CN147613 WOUND1_50_G07.g1_A002 Wounded leaves... 170 1e-043
gb|CN137511.1|CN137511 OX1_57_F09.g1_A002 Oxidatively-stres... 169 2e-043
gb|BG047650.1|BG047650 OV1_26_E03.b1_A002 Ovary 1 (OV1) Sor... 162 3e-041
gb|BG948748.1|BG948748 LG1_330_B09.b1_A002 Light Grown 1 (L... 164 6e-040
gb|BG048004.1|BG048004 OV1_26_E03.g1_A002 Ovary 1 (OV1) Sor... 164 1e-039
gb|CF772686.1|CF772686 DSBF1_38_B07.g1_A010 Drought-stresse... 164 1e-039
gb|BE352878.1|BE352878 LG1_295_E09.g1_A002 Light Grown 1 (L... 163 2e-039
gb|CX608780.1|CX608780 ANR1_40_E04.g1_A002 Anaerobic roots ... 161 5e-039
gb|CX608695.1|CX608695 ANR1_40_E04.b1_A002 Anaerobic roots ... 161 5e-039
gb|BE593343.1|BE593343 WS1_100_F02.g1_A002 Water-stressed 1... 157 1e-037
gb|CN137437.1|CN137437 OX1_57_F09.b1_A002 Oxidatively-stres... 153 4e-036
gb|BF656971.1|BF656971 OV2_19_D04.b1_A002 Ovary 2 (OV2) Sor... 138 3e-035
gb|BE593549.1|BE593549 WS1_100_F02.b1_A002 Water-stressed 1... 139 5e-032
gb|BZ342419.1|BZ342419 ic83d06.b1 WGS-SbicolorF (JM107 adap... 123 3e-027
gb|BZ628144.1|BZ628144 ih58b12.b1 WGS-SbicolorF (DH5a methy... 123 3e-027
gb|CW281247.1|CW281247 104_756_11408071_148_35453_018 Sorgh... 123 3e-027
gb|CW052881.1|CW052881 104_292_10515660_115_30287 Sorghum m... 82 1e-026
gb|CW408461.1|CW408461 fsbb001f102f20f0 Sorghum methylation... 82 1e-026
gb|CW310460.1|CW310460 104_799_11469725_148_35749_021 Sorgh... 82 1e-026
gb|CW321435.1|CW321435 104_814_11475549_148_35938_083 Sorgh... 106 2e-025
gb|CW056425.1|CW056425 104_298_10517676_115_30157 Sorghum m... 115 1e-024
gb|CW058776.1|CW058776 104_301_10518927_114_30160 Sorghum m... 115 1e-024
gb|CW200534.1|CW200534 104_626_11184106_148_36867_045 Sorgh... 115 1e-024
gb|CD211819.1|CD211819 HS1_64_B01.g1_A012 Heat-shocked seed... 88 2e-022
>gb|CD432106.1|CD432106 ETH1_26_A06.b1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_A06_A002 3', mRNA sequence
Length = 611
Score = 231 bits (499), Expect(3) = 8e-065
Identities = 96/114 (84%), Positives = 101/114 (88%)
Frame = +2 / +2
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
RDGPEEGQGPAAVVEA QVR WQA+EEEVEQG AKGEG+QR AVRPG+LRQAAL GAQVQ
Sbjct: 83 RDGPEEGQGPAAVVEARQVRRWQAEEEEVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQ 262
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIRMGK 406
A+HP PLRA EDQ LPCSEGHQG DGAWPH DG PLKPADLHQGNQY+RMGK
Sbjct: 263 ADHPLRPLRALEDQWLPCSEGHQGPDGAWPHPDGRCPLKPADLHQGNQYLRMGK 424
Score = 180 bits (388), Expect(2) = 4e-046
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +3 / +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRMV+VH
Sbjct: 195 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 374
Query: 357 SSQQIYTRATNT*GWGRGLKCIVC 428
SSQQIYTRATNT*GWGR C +C
Sbjct: 375 SSQQIYTRATNT*GWGRACICPLC 446
Score = 160 bits (343), Expect(2) = 3e-039
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = -1 / -2
Query: 427 QTMHFRPLPHPYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVI 248
Q + LPHP VLVALV*ICWLEWT TIRMRPRAI+SLMALRAREPLIL+RSER EGVI
Sbjct: 445 QRGQIQALPHP*VLVALV*ICWLEWTATIRMRPRAIRSLMALRAREPLILKRSERTEGVI 266
Query: 247 CLYLGTSESSLS*VAWSNSTA 185
CLYLGTSESSLS*VAWSNSTA
Sbjct: 265 CLYLGTSESSLS*VAWSNSTA 203
Score = 159 bits (342), Expect(4) = 3e-064
Identities = 66/73 (90%), Positives = 68/73 (93%)
Frame = -3 / -1
Query: 407 SSPSLCIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHL 228
SSPSL IGCPGVDLLA*VD DHP+EATRHQVLDGPPSKGA+DPQ LGEDG GDLLVLGHL
Sbjct: 425 SSPSLGIGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHL 246
Query: 227 REQLVVGSLVEQH 189
REQLVVG LVEQH
Sbjct: 245 REQLVVGGLVEQH 207
Score = 110 bits (234), Expect = 3e-023
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -2 / -3
Query: 408 LFPILMYWLPWCRSAGLSGPRPSE*GHAPSSP*WPSEQGSR*SSDARRGWKG* 250
LFPIL YWLPWCRSAGLSG RPS *GHAPS P*WPSEQGS *SS ARRG +G*
Sbjct: 426 LFPILRYWLPWCRSAGLSGQRPSG*GHAPSGP*WPSEQGSH*SSSARRGRRG* 268
Score = 87.7 bits (185), Expect(4) = 3e-064
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS ACH RTW ASTTAAGPCPSSGPSR
Sbjct: 195 PSPFAYPCSTSSSSACHRRTWRASTTAAGPCPSSGPSR 82
Score = 32.2 bits (64), Expect(3) = 8e-065
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +3 / +3
Query: 402 GRGLKCIVCPLCRRSSSLEQLPSLSRV 482
G G CI R SSSLEQL SLSRV
Sbjct: 414 GWGRACICPLCSRSSSSLEQLSSLSRV 494
Score = 32.2 bits (64), Expect(4) = 3e-064
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1 / -2
Query: 481 TLDKDGNCSKDELLLQRGQTMHFRPLP 401
TLDKD NCSKD+ LL + + P P
Sbjct: 493 TLDKDDNCSKDDELLLQRGQIQALPHP 413
Score = 25.8 bits (50), Expect(2) = 4e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +1
Query: 451 L*NSCHLCQE 480
L*+SCHLCQE
Sbjct: 463 L*SSCHLCQE 492
Score = 24.4 bits (47), Expect(4) = 3e-064
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 544 YSKSLKCCRHLELIT 500
YSKSLKC H +T
Sbjct: 550 YSKSLKCFSHRSQVT 506
Score = 24.0 bits (46), Expect(3) = 8e-065
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +3
Query: 522 QHFRDFEYFY*LVLWFANY 578
+HFRDFEY ++ NY
Sbjct: 528 KHFRDFEY*LCTMVCLINY 584
Score = 23.5 bits (45), Expect(2) = 3e-039
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -2
Query: 469 DGNCSKDELLLQRGQ 425
D DELLLQRGQ
Sbjct: 478 DNCSKDDELLLQRGQ 434
>gb|CD432203.1|CD432203 ETH1_26_A06.g1_A002 Ethylene-treated seedlings Sorghum bicolor cDNA
clone ETH1_26_A06_A002 5', mRNA sequence
Length = 609
Score = 231 bits (499), Expect(3) = 8e-065
Identities = 96/114 (84%), Positives = 101/114 (88%)
Frame = +2 / +1
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
RDGPEEGQGPAAVVEA QVR WQA+EEEVEQG AKGEG+QR AVRPG+LRQAAL GAQVQ
Sbjct: 85 RDGPEEGQGPAAVVEARQVRRWQAEEEEVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQ 264
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIRMGK 406
A+HP PLRA EDQ LPCSEGHQG DGAWPH DG PLKPADLHQGNQY+RMGK
Sbjct: 265 ADHPLRPLRALEDQWLPCSEGHQGPDGAWPHPDGRCPLKPADLHQGNQYLRMGK 426
Score = 180 bits (388), Expect(2) = 4e-046
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +3 / +2
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRMV+VH
Sbjct: 197 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 376
Query: 357 SSQQIYTRATNT*GWGRGLKCIVC 428
SSQQIYTRATNT*GWGR C +C
Sbjct: 377 SSQQIYTRATNT*GWGRACICPLC 448
Score = 160 bits (343), Expect(2) = 3e-039
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = -1 / -1
Query: 427 QTMHFRPLPHPYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVI 248
Q + LPHP VLVALV*ICWLEWT TIRMRPRAI+SLMALRAREPLIL+RSER EGVI
Sbjct: 447 QRGQIQALPHP*VLVALV*ICWLEWTATIRMRPRAIRSLMALRAREPLILKRSERTEGVI 268
Query: 247 CLYLGTSESSLS*VAWSNSTA 185
CLYLGTSESSLS*VAWSNSTA
Sbjct: 267 CLYLGTSESSLS*VAWSNSTA 205
Score = 159 bits (342), Expect(4) = 3e-064
Identities = 66/73 (90%), Positives = 68/73 (93%)
Frame = -3 / -3
Query: 407 SSPSLCIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHL 228
SSPSL IGCPGVDLLA*VD DHP+EATRHQVLDGPPSKGA+DPQ LGEDG GDLLVLGHL
Sbjct: 427 SSPSLGIGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHL 248
Query: 227 REQLVVGSLVEQH 189
REQLVVG LVEQH
Sbjct: 247 REQLVVGGLVEQH 209
Score = 110 bits (234), Expect = 3e-023
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -2 / -2
Query: 408 LFPILMYWLPWCRSAGLSGPRPSE*GHAPSSP*WPSEQGSR*SSDARRGWKG* 250
LFPIL YWLPWCRSAGLSG RPS *GHAPS P*WPSEQGS *SS ARRG +G*
Sbjct: 428 LFPILRYWLPWCRSAGLSGQRPSG*GHAPSGP*WPSEQGSH*SSSARRGRRG* 270
Score = 87.7 bits (185), Expect(4) = 3e-064
Identities = 33/38 (86%), Positives = 34/38 (89%)
Frame = -2 / -2
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS ACH RTW ASTTAAGPCPSSGPSR
Sbjct: 197 PSPFAYPCSTSSSSACHRRTWRASTTAAGPCPSSGPSR 84
Score = 32.2 bits (64), Expect(3) = 8e-065
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +3 / +2
Query: 402 GRGLKCIVCPLCRRSSSLEQLPSLSRV 482
G G CI R SSSLEQL SLSRV
Sbjct: 416 GWGRACICPLCSRSSSSLEQLSSLSRV 496
Score = 32.2 bits (64), Expect(4) = 3e-064
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1 / -1
Query: 481 TLDKDGNCSKDELLLQRGQTMHFRPLP 401
TLDKD NCSKD+ LL + + P P
Sbjct: 495 TLDKDDNCSKDDELLLQRGQIQALPHP 415
Score = 25.8 bits (50), Expect(2) = 4e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +3
Query: 451 L*NSCHLCQE 480
L*+SCHLCQE
Sbjct: 465 L*SSCHLCQE 494
Score = 24.4 bits (47), Expect(4) = 3e-064
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 544 YSKSLKCCRHLELIT 500
YSKSLKC H +T
Sbjct: 552 YSKSLKCFSHRSQVT 508
Score = 24.0 bits (46), Expect(3) = 8e-065
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +2
Query: 522 QHFRDFEYFY*LVLWFANY 578
+HFRDFEY ++ NY
Sbjct: 530 KHFRDFEY*LCTMVCLINY 586
Score = 23.5 bits (45), Expect(2) = 3e-039
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 469 DGNCSKDELLLQRGQ 425
D DELLLQRGQ
Sbjct: 480 DNCSKDDELLLQRGQ 436
>gb|CF484027.1|CF484027 POL1_2_D10.g1_A002 Pollen Sorghum bicolor cDNA clone
POL1_2_D10_A002 5', mRNA sequence
Length = 502
Score = 195 bits (420), Expect(3) = 5e-054
Identities = 81/99 (81%), Positives = 86/99 (86%)
Frame = +2 / -3
Query: 110 AGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQR 289
A QVR WQA+EEEVEQG AKGEG+QR AVRPG+LRQAAL GAQVQA+HP PLRA EDQ
Sbjct: 500 ARQVRRWQAEEEEVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQW 321
Query: 290 LPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIRMGK 406
LPCSEGHQG DGAWPH DG PLKPADLHQGNQY+RMGK
Sbjct: 320 LPCSEGHQGPDGAWPHPDGRCPLKPADLHQGNQYLRMGK 204
Score = 176 bits (379), Expect(2) = 7e-045
Identities = 76/84 (90%), Positives = 79/84 (94%)
Frame = +3 / -1
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQAT DKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRMV+VH
Sbjct: 433 VNNAVLFDQATCDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 254
Query: 357 SSQQIYTRATNT*GWGRGLKCIVC 428
SSQQIYTRATNT*GWGR C +C
Sbjct: 253 SSQQIYTRATNT*GWGRACICPLC 182
Score = 157 bits (338), Expect(4) = 1e-052
Identities = 65/73 (89%), Positives = 67/73 (91%)
Frame = -3 / +2
Query: 407 SSPSLCIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHL 228
SSPSL IGCPGVDLLA*VD DHP+EATRHQVLDGPPSKGA+DPQ LGEDG GDLLVLGHL
Sbjct: 203 SSPSLGIGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHL 382
Query: 227 REQLVVGSLVEQH 189
REQLV G LVEQH
Sbjct: 383 REQLVAGGLVEQH 421
Score = 157 bits (338), Expect(2) = 1e-038
Identities = 69/81 (85%), Positives = 72/81 (88%)
Frame = -1 / +3
Query: 427 QTMHFRPLPHPYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVI 248
Q + LPHP VLVALV*ICWLEWT TIRMRPRAI+SLMALRAREPLIL+RSER EGVI
Sbjct: 183 QRGQIQALPHP*VLVALV*ICWLEWTATIRMRPRAIRSLMALRAREPLILKRSERTEGVI 362
Query: 247 CLYLGTSESSLS*VAWSNSTA 185
CLYLGTSESSLS VAWSNSTA
Sbjct: 363 CLYLGTSESSLSQVAWSNSTA 425
Score = 110 bits (234), Expect = 3e-023
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 408 LFPILMYWLPWCRSAGLSGPRPSE*GHAPSSP*WPSEQGSR*SSDARRGWKG* 250
LFPIL YWLPWCRSAGLSG RPS *GHAPS P*WPSEQGS *SS ARRG +G*
Sbjct: 202 LFPILRYWLPWCRSAGLSGQRPSG*GHAPSGP*WPSEQGSH*SSSARRGRRG* 360
Score = 50.6 bits (104), Expect(4) = 1e-052
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = -2 / +1
Query: 177 PSPLAFPCSTSSSFACHHRTWPA 109
PSP A+PCSTSSS ACH RTW A
Sbjct: 433 PSPFAYPCSTSSSSACHRRTWRA 501
Score = 32.2 bits (64), Expect(3) = 5e-054
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +3 / -1
Query: 402 GRGLKCIVCPLCRRSSSLEQLPSLSRV 482
G G CI R SSSLEQL SLSRV
Sbjct: 214 GWGRACICPLCSRSSSSLEQLSSLSRV 134
Score = 32.2 bits (64), Expect(4) = 1e-052
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1 / +3
Query: 481 TLDKDGNCSKDELLLQRGQTMHFRPLP 401
TLDKD NCSKD+ LL + + P P
Sbjct: 135 TLDKDDNCSKDDELLLQRGQIQALPHP 215
Score = 25.8 bits (50), Expect(2) = 7e-045
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -2
Query: 451 L*NSCHLCQE 480
L*+SCHLCQE
Sbjct: 165 L*SSCHLCQE 136
Score = 24.4 bits (47), Expect(4) = 1e-052
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 544 YSKSLKCCRHLELIT 500
YSKSLKC H +T
Sbjct: 78 YSKSLKCFSHRSQVT 122
Score = 24.0 bits (46), Expect(3) = 5e-054
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / -1
Query: 522 QHFRDFEYFY*LVLWFANY 578
+HFRDFEY ++ NY
Sbjct: 100 KHFRDFEY*LCTMVCLINY 44
Score = 23.5 bits (45), Expect(2) = 1e-038
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 469 DGNCSKDELLLQRGQ 425
D DELLLQRGQ
Sbjct: 150 DNCSKDDELLLQRGQ 194
>gb|AW745353.1|AW745353 WS1_33_E12.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 488
Score = 192 bits (414), Expect(3) = 3e-053
Identities = 79/97 (81%), Positives = 85/97 (87%)
Frame = +2 / +3
Query: 116 QVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQRLP 295
+VR WQA+EEEVEQG AKGEG+QR AVRPG+LRQAAL GAQVQA+HP PLRA EDQ LP
Sbjct: 6 RVRRWQAEEEEVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQWLP 185
Query: 296 CSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIRMGK 406
CSEGHQG DGAWPH DG PLKPADLHQGNQY+RMGK
Sbjct: 186 CSEGHQGPDGAWPHPDGRCPLKPADLHQGNQYLRMGK 296
Score = 180 bits (388), Expect(2) = 4e-046
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +3 / +1
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRMV+VH
Sbjct: 67 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 246
Query: 357 SSQQIYTRATNT*GWGRGLKCIVC 428
SSQQIYTRATNT*GWGR C +C
Sbjct: 247 SSQQIYTRATNT*GWGRACICPLC 318
Score = 160 bits (343), Expect(2) = 3e-039
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = -1 / -1
Query: 427 QTMHFRPLPHPYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVI 248
Q + LPHP VLVALV*ICWLEWT TIRMRPRAI+SLMALRAREPLIL+RSER EGVI
Sbjct: 317 QRGQIQALPHP*VLVALV*ICWLEWTATIRMRPRAIRSLMALRAREPLILKRSERTEGVI 138
Query: 247 CLYLGTSESSLS*VAWSNSTA 185
CLYLGTSESSLS*VAWSNSTA
Sbjct: 137 CLYLGTSESSLS*VAWSNSTA 75
Score = 159 bits (342), Expect(4) = 2e-051
Identities = 66/73 (90%), Positives = 68/73 (93%)
Frame = -3 / -3
Query: 407 SSPSLCIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHL 228
SSPSL IGCPGVDLLA*VD DHP+EATRHQVLDGPPSKGA+DPQ LGEDG GDLLVLGHL
Sbjct: 297 SSPSLGIGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHL 118
Query: 227 REQLVVGSLVEQH 189
REQLVVG LVEQH
Sbjct: 117 REQLVVGGLVEQH 79
Score = 110 bits (234), Expect = 3e-023
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -2 / -2
Query: 408 LFPILMYWLPWCRSAGLSGPRPSE*GHAPSSP*WPSEQGSR*SSDARRGWKG* 250
LFPIL YWLPWCRSAGLSG RPS *GHAPS P*WPSEQGS *SS ARRG +G*
Sbjct: 298 LFPILRYWLPWCRSAGLSGQRPSG*GHAPSGP*WPSEQGSH*SSSARRGRRG* 140
Score = 44.6 bits (91), Expect(4) = 2e-051
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / -2
Query: 177 PSPLAFPCSTSSSFACHHRT 118
PSP A+PCSTSSS ACH RT
Sbjct: 67 PSPFAYPCSTSSSSACHRRT 8
Score = 32.2 bits (64), Expect(3) = 3e-053
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +3 / +1
Query: 402 GRGLKCIVCPLCRRSSSLEQLPSLSRV 482
G G CI R SSSLEQL SLSRV
Sbjct: 286 GWGRACICPLCSRSSSSLEQLSSLSRV 366
Score = 32.2 bits (64), Expect(4) = 2e-051
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1 / -1
Query: 481 TLDKDGNCSKDELLLQRGQTMHFRPLP 401
TLDKD NCSKD+ LL + + P P
Sbjct: 365 TLDKDDNCSKDDELLLQRGQIQALPHP 285
Score = 25.8 bits (50), Expect(2) = 4e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 451 L*NSCHLCQE 480
L*+SCHLCQE
Sbjct: 335 L*SSCHLCQE 364
Score = 24.4 bits (47), Expect(4) = 2e-051
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 544 YSKSLKCCRHLELIT 500
YSKSLKC H +T
Sbjct: 422 YSKSLKCFSHRSQVT 378
Score = 24.0 bits (46), Expect(3) = 3e-053
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 522 QHFRDFEYFY*LVLWFANY 578
+HFRDFEY ++ NY
Sbjct: 400 KHFRDFEY*LCTMVCLINY 456
Score = 23.5 bits (45), Expect(2) = 3e-039
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 469 DGNCSKDELLLQRGQ 425
D DELLLQRGQ
Sbjct: 350 DNCSKDDELLLQRGQ 306
>gb|AW679925.1|AW679925 WS1_33_E12.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 464
Score = 192 bits (414), Expect(3) = 3e-053
Identities = 79/97 (81%), Positives = 85/97 (87%)
Frame = +2 / +3
Query: 116 QVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQRLP 295
+VR WQA+EEEVEQG AKGEG+QR AVRPG+LRQAAL GAQVQA+HP PLRA EDQ LP
Sbjct: 6 RVRRWQAEEEEVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQADHPLRPLRALEDQWLP 185
Query: 296 CSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIRMGK 406
CSEGHQG DGAWPH DG PLKPADLHQGNQY+RMGK
Sbjct: 186 CSEGHQGPDGAWPHPDGRCPLKPADLHQGNQYLRMGK 296
Score = 180 bits (388), Expect(2) = 4e-046
Identities = 77/84 (91%), Positives = 80/84 (95%)
Frame = +3 / +1
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRMV+VH
Sbjct: 67 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVAVH 246
Query: 357 SSQQIYTRATNT*GWGRGLKCIVC 428
SSQQIYTRATNT*GWGR C +C
Sbjct: 247 SSQQIYTRATNT*GWGRACICPLC 318
Score = 160 bits (343), Expect(2) = 3e-039
Identities = 70/81 (86%), Positives = 73/81 (90%)
Frame = -1 / -1
Query: 427 QTMHFRPLPHPYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVI 248
Q + LPHP VLVALV*ICWLEWT TIRMRPRAI+SLMALRAREPLIL+RSER EGVI
Sbjct: 317 QRGQIQALPHP*VLVALV*ICWLEWTATIRMRPRAIRSLMALRAREPLILKRSERTEGVI 138
Query: 247 CLYLGTSESSLS*VAWSNSTA 185
CLYLGTSESSLS*VAWSNSTA
Sbjct: 137 CLYLGTSESSLS*VAWSNSTA 75
Score = 159 bits (342), Expect(4) = 2e-051
Identities = 66/73 (90%), Positives = 68/73 (93%)
Frame = -3 / -3
Query: 407 SSPSLCIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHL 228
SSPSL IGCPGVDLLA*VD DHP+EATRHQVLDGPPSKGA+DPQ LGEDG GDLLVLGHL
Sbjct: 297 SSPSLGIGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGHL 118
Query: 227 REQLVVGSLVEQH 189
REQLVVG LVEQH
Sbjct: 117 REQLVVGGLVEQH 79
Score = 110 bits (234), Expect = 3e-023
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -2 / -2
Query: 408 LFPILMYWLPWCRSAGLSGPRPSE*GHAPSSP*WPSEQGSR*SSDARRGWKG* 250
LFPIL YWLPWCRSAGLSG RPS *GHAPS P*WPSEQGS *SS ARRG +G*
Sbjct: 298 LFPILRYWLPWCRSAGLSGQRPSG*GHAPSGP*WPSEQGSH*SSSARRGRRG* 140
Score = 44.6 bits (91), Expect(4) = 2e-051
Identities = 16/20 (80%), Positives = 17/20 (85%)
Frame = -2 / -2
Query: 177 PSPLAFPCSTSSSFACHHRT 118
PSP A+PCSTSSS ACH RT
Sbjct: 67 PSPFAYPCSTSSSSACHRRT 8
Score = 32.2 bits (64), Expect(3) = 3e-053
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +3 / +1
Query: 402 GRGLKCIVCPLCRRSSSLEQLPSLSRV 482
G G CI R SSSLEQL SLSRV
Sbjct: 286 GWGRACICPLCSRSSSSLEQLSSLSRV 366
Score = 32.2 bits (64), Expect(4) = 2e-051
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1 / -1
Query: 481 TLDKDGNCSKDELLLQRGQTMHFRPLP 401
TLDKD NCSKD+ LL + + P P
Sbjct: 365 TLDKDDNCSKDDELLLQRGQIQALPHP 285
Score = 25.8 bits (50), Expect(2) = 4e-046
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / +2
Query: 451 L*NSCHLCQE 480
L*+SCHLCQE
Sbjct: 335 L*SSCHLCQE 364
Score = 24.4 bits (47), Expect(4) = 2e-051
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 544 YSKSLKCCRHLELIT 500
YSKSLKC H +T
Sbjct: 422 YSKSLKCFSHRSQVT 378
Score = 24.0 bits (46), Expect(3) = 3e-053
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / +1
Query: 522 QHFRDFEYFY*LVLWFANY 578
+HFRDFEY ++ NY
Sbjct: 400 KHFRDFEY*LCTMVCLINY 456
Score = 23.5 bits (45), Expect(2) = 3e-039
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / -1
Query: 469 DGNCSKDELLLQRGQ 425
D DELLLQRGQ
Sbjct: 350 DNCSKDDELLLQRGQ 306
>gb|CN147613.1|CN147613 WOUND1_50_G07.g1_A002 Wounded leaves Sorghum bicolor cDNA clone
WOUND1_50_G07_A002 5', mRNA sequence
Length = 528
Score = 170 bits (366), Expect = 2e-041
Identities = 72/111 (64%), Positives = 88/111 (79%)
Frame = +2 / +2
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
R GPEEG+GPAAVV+AGQVR +A+EEEVEQG A+GEG+Q GA+RPG+LRQ L GAQVQ
Sbjct: 56 RHGPEEGEGPAAVVQAGQVRRREAEEEEVEQG*AEGEGQQLGALRPGHLRQVGLRGAQVQ 235
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
A+HP PLRAS+D + +EGH G DG H DGL +PAD+HQGNQ++R
Sbjct: 236 ADHPIRPLRASQD*WILGTEGH*GSDGKGAHKDGLCSFQPADIHQGNQHMR 388
Score = 163 bits (351), Expect = 2e-039
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +3 / +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN+VLFDQATYDKL+SEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRMVSVH
Sbjct: 168 VNNSVLFDQATYDKLVSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVSVH 347
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 348 SSQQIYTRATNT*G 389
Score = 127 bits (273), Expect(2) = 1e-043
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = -1 / -3
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE TETI M P AI+SLMALRA++PLILRRSER +GVICLYLGTSE++
Sbjct: 388 PHVLVALVYICWLE*TETILMSPLAIRSLMALRAKDPLILRRSERTDGVICLYLGTSETN 209
Query: 217 LS*VAWSNST 188
LS*VAWS ST
Sbjct: 208 LS*VAWSKST 179
Score = 120 bits (257), Expect = 2e-026
Identities = 46/68 (67%), Positives = 58/68 (85%)
Frame = -3 / -2
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++RDHP E HQ+L+GPP +G+++P+TLGEDG GDLLVLGHL +QLV
Sbjct: 383 CVGCPGVYLLAGMNRDHPYEPPCHQILNGPPCQGSINPETLGEDGWGDLLVLGHLGDQLV 204
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 203 VGGLVEEH 180
Score = 70.3 bits (147), Expect(2) = 1e-043
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -2 / -1
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RTWPA TTAAGP PSSGP R
Sbjct: 168 PSPSAYPCSTSSSSASRLRTWPAWTTAAGPSPSSGPWR 55
>gb|CN137511.1|CN137511 OX1_57_F09.g1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_F09_A002 5', mRNA sequence
Length = 573
Score = 169 bits (364), Expect = 4e-041
Identities = 72/111 (64%), Positives = 87/111 (78%)
Frame = +2 / +1
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
R GPEEG+GPAAVV+AGQVR +A+EEEVEQG A+GEG+Q GA+RPG+LRQ L GAQVQ
Sbjct: 34 RHGPEEGEGPAAVVQAGQVRRREAEEEEVEQG*AEGEGQQLGALRPGHLRQVGLRGAQVQ 213
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
A+HP PLRAS D + +EGH G DG H DGL +PAD+HQGNQ++R
Sbjct: 214 ADHPIRPLRASHD*WILGTEGH*GSDGKGAHKDGLCSFQPADIHQGNQHMR 366
Score = 160 bits (345), Expect = 2e-038
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = +3 / +2
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN+VLFDQATYDKL+SEVPKYKQITPS+LSERL INGSLARRAIKDLMARGLIRMVSVH
Sbjct: 146 VNNSVLFDQATYDKLVSEVPKYKQITPSVLSERLMINGSLARRAIKDLMARGLIRMVSVH 325
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 326 SSQQIYTRATNT*G 367
Score = 127 bits (271), Expect(2) = 2e-043
Identities = 55/70 (78%), Positives = 63/70 (90%)
Frame = -1 / -1
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE TETI M P AI+SLMALRA++PLI+RRSER +GVICLYLGTSE++
Sbjct: 366 PHVLVALVYICWLE*TETILMSPLAIRSLMALRAKDPLIMRRSERTDGVICLYLGTSETN 187
Query: 217 LS*VAWSNST 188
LS*VAWS ST
Sbjct: 186 LS*VAWSKST 157
Score = 116 bits (248), Expect = 4e-025
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = -3 / -3
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++RDHP E HQ+L+GPP +G+++ +TLGEDG GDLLVLGHL +QLV
Sbjct: 361 CVGCPGVYLLAGMNRDHPYEPPCHQILNGPPCQGSINHETLGEDGWGDLLVLGHLGDQLV 182
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 181 VGGLVEEH 158
Score = 70.3 bits (147), Expect(2) = 2e-043
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -2 / -2
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RTWPA TTAAGP PSSGP R
Sbjct: 146 PSPSAYPCSTSSSSASRLRTWPAWTTAAGPSPSSGPWR 33
>gb|BG047650.1|BG047650 OV1_26_E03.b1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 430
Score = 162 bits (349), Expect(2) = 3e-041
Identities = 70/73 (95%), Positives = 73/73 (100%)
Frame = +3 / +2
Query: 180 NNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHS 359
NNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRM++VHS
Sbjct: 44 NNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVHS 223
Query: 360 SQQIYTRATNT*G 398
SQQIYTRATNT*G
Sbjct: 224 SQQIYTRATNT*G 262
Score = 122 bits (262), Expect(2) = 8e-031
Identities = 55/71 (77%), Positives = 61/71 (85%)
Frame = -1 / -2
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE T I M P AI+SLMALRA++PLILRRSE +GVICLYLGTSES+
Sbjct: 261 PHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVICLYLGTSESN 82
Query: 217 LS*VAWSNSTA 185
LS*VAWS STA
Sbjct: 81 LS*VAWSKSTA 49
Score = 118 bits (253), Expect = 8e-026
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -3 / -1
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++ DHP E HQ+L+GPP +G++DP+TLGE GRGDLLVLG+L EQLV
Sbjct: 256 CVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLV 77
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 76 VGGLVEEH 53
Score = 32.2 bits (64), Expect(2) = 8e-031
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2 / -2
Query: 180 LPSPLAFPCSTSSS 139
LPSP A+PCSTSSS
Sbjct: 45 LPSPSAYPCSTSSS 4
Score = 27.2 bits (53), Expect(2) = 3e-041
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +2 / +2
Query: 140 EEEVEQGKAKGEG 178
EEEVEQG A+GEG
Sbjct: 5 EEEVEQG*AEGEG 43
>gb|BG948748.1|BG948748 LG1_330_B09.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 572
Score = 164 bits (353), Expect = 1e-039
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +3 / +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRM++VH
Sbjct: 135 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVH 314
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 315 SSQQIYTRATNT*G 356
Score = 161 bits (346), Expect = 1e-038
Identities = 70/111 (63%), Positives = 86/111 (77%)
Frame = +2 / +2
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
R GPEEG GPAAVV+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQ
Sbjct: 23 RHGPEEG*GPAAVVQAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQ 202
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
A+HP LRAS+DQ + +EGH G DG H D +PAD+HQGNQ++R
Sbjct: 203 ADHPVRALRASQDQWILGTEGH*GSDGKGAHKDDRCSFQPADIHQGNQHMR 355
Score = 122 bits (262), Expect(2) = 6e-040
Identities = 55/71 (77%), Positives = 61/71 (85%)
Frame = -1 / -2
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE T I M P AI+SLMALRA++PLILRRSE +GVICLYLGTSES+
Sbjct: 355 PHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVICLYLGTSESN 176
Query: 217 LS*VAWSNSTA 185
LS*VAWS STA
Sbjct: 175 LS*VAWSKSTA 143
Score = 118 bits (253), Expect = 8e-026
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -3 / -1
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++ DHP E HQ+L+GPP +G++DP+TLGE GRGDLLVLG+L EQLV
Sbjct: 350 CVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLV 171
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 170 VGGLVEEH 147
Score = 62.9 bits (131), Expect(2) = 6e-040
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RT PA TTAAGP PSSGP R
Sbjct: 135 PSPSAYPCSTSSSSASRLRT*PAWTTAAGPYPSSGPWR 22
>gb|BG048004.1|BG048004 OV1_26_E03.g1_A002 Ovary 1 (OV1) Sorghum bicolor cDNA, mRNA
sequence
Length = 371
Score = 164 bits (353), Expect = 1e-039
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +3 / +3
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRM++VH
Sbjct: 42 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVH 221
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 222 SSQQIYTRATNT*G 263
Score = 126 bits (270), Expect = 4e-028
Identities = 53/86 (61%), Positives = 66/86 (76%)
Frame = +2 / +2
Query: 140 EEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQRLPCSEGHQGL 319
EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQA+HP LRAS+DQ + +EGH G
Sbjct: 5 EEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQADHPVRALRASQDQWILGTEGH*GS 184
Query: 320 DGAWPHSDGLGPLKPADLHQGNQYIR 397
DG H D +PAD+HQGNQ++R
Sbjct: 185 DGKGAHKDDRCSFQPADIHQGNQHMR 262
Score = 122 bits (262), Expect(2) = 3e-030
Identities = 55/71 (77%), Positives = 61/71 (85%)
Frame = -1 / -2
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE T I M P AI+SLMALRA++PLILRRSE +GVICLYLGTSES+
Sbjct: 262 PHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVICLYLGTSESN 83
Query: 217 LS*VAWSNSTA 185
LS*VAWS STA
Sbjct: 82 LS*VAWSKSTA 50
Score = 118 bits (253), Expect = 8e-026
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -3 / -1
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++ DHP E HQ+L+GPP +G++DP+TLGE GRGDLLVLG+L EQLV
Sbjct: 257 CVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLV 78
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 77 VGGLVEEH 54
Score = 30.4 bits (60), Expect(2) = 3e-030
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSSS 139
PSP A+PCSTSSS
Sbjct: 42 PSPSAYPCSTSSS 4
>gb|CF772686.1|CF772686 DSBF1_38_B07.g1_A010 Drought-stressed before flowering Sorghum
bicolor cDNA clone DSBF1_38_B07_A010 3', mRNA sequence
Length = 462
Score = 164 bits (353), Expect = 1e-039
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +3 / +1
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRM++VH
Sbjct: 73 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVH 252
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 253 SSQQIYTRATNT*G 294
Score = 134 bits (288), Expect = 1e-030
Identities = 58/97 (59%), Positives = 74/97 (76%)
Frame = +2 / +3
Query: 107 EAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQ 286
+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQA+HP LRAS+DQ
Sbjct: 3 QAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQADHPVRALRASQDQ 182
Query: 287 RLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
+ +EGH G DG H D +PAD+HQGNQ++R
Sbjct: 183 WILGTEGH*GSDGKGAHKDDRCSFQPADIHQGNQHMR 293
Score = 122 bits (262), Expect(2) = 3e-032
Identities = 55/71 (77%), Positives = 61/71 (85%)
Frame = -1 / -2
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE T I M P AI+SLMALRA++PLILRRSE +GVICLYLGTSES+
Sbjct: 293 PHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVICLYLGTSESN 114
Query: 217 LS*VAWSNSTA 185
LS*VAWS STA
Sbjct: 113 LS*VAWSKSTA 81
Score = 118 bits (253), Expect = 8e-026
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -3 / -1
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++ DHP E HQ+L+GPP +G++DP+TLGE GRGDLLVLG+L EQLV
Sbjct: 288 CVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLV 109
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 108 VGGLVEEH 85
Score = 37.3 bits (75), Expect(2) = 3e-032
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSSSFACHHRTWPA 109
PSP A+PCSTSSS A RT PA
Sbjct: 73 PSPSAYPCSTSSSSASRLRT*PA 5
>gb|BE352878.1|BE352878 LG1_295_E09.g1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA
sequence
Length = 428
Score = 163 bits (351), Expect = 2e-039
Identities = 71/74 (95%), Positives = 74/74 (100%)
Frame = +3 / +2
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN+VLFDQATYDKL+SEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRMVSVH
Sbjct: 53 VNNSVLFDQATYDKLVSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMVSVH 232
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 233 SSQQIYTRATNT*G 274
Score = 128 bits (274), Expect = 1e-028
Identities = 54/89 (60%), Positives = 68/89 (76%)
Frame = +2 / +1
Query: 131 QAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQRLPCSEGH 310
+A+EEEVEQG A+GEG+Q GA+R G+LRQ L GAQVQA+HP PLRAS+D + +EGH
Sbjct: 7 EAEEEEVEQG*AEGEGQQLGALRSGHLRQVGLRGAQVQADHPIRPLRASQD*WILGTEGH 186
Query: 311 QGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
G DG H DGL +PAD+HQGNQ++R
Sbjct: 187 *GSDGKGAHKDGLCSFQPADIHQGNQHMR 273
Score = 121 bits (258), Expect(2) = 5e-030
Identities = 55/70 (78%), Positives = 62/70 (88%)
Frame = -1 / -3
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE TETI M P AI+SLMALRA++PLILRRSER +GVICLYLGTSE++
Sbjct: 273 PHVLVALVYICWLE*TETILMSPLAIRSLMALRAKDPLILRRSERTDGVICLYLGTSETN 94
Query: 217 LS*VAWSNST 188
LS*VA S ST
Sbjct: 93 LS*VA*SKST 64
Score = 120 bits (256), Expect = 3e-026
Identities = 45/68 (66%), Positives = 58/68 (85%)
Frame = -3 / -2
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++RDHP E HQ+L+GPP +G+++P+TLGEDG GDLLVLGHL +QLV
Sbjct: 268 CVGCPGVYLLAGMNRDHPYEPPCHQILNGPPCQGSINPETLGEDGWGDLLVLGHLGDQLV 89
Query: 212 VGSLVEQH 189
VG L+E+H
Sbjct: 88 VGGLIEEH 65
Score = 31.3 bits (62), Expect(2) = 5e-030
Identities = 12/15 (80%), Positives = 13/15 (86%)
Frame = -2 / -1
Query: 177 PSPLAFPCSTSSSFA 133
PSP A+PCSTSSS A
Sbjct: 53 PSPSAYPCSTSSSSA 9
>gb|CX608780.1|CX608780 ANR1_40_E04.g1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_40_E04_A002 5', mRNA sequence
Length = 535
Score = 161 bits (346), Expect = 1e-038
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = +3 / +1
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLAR AIKDLMARGLIRM++VH
Sbjct: 148 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARGAIKDLMARGLIRMIAVH 327
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 328 SSQQIYTRATNT*G 369
Score = 158 bits (339), Expect = 1e-037
Identities = 69/111 (62%), Positives = 85/111 (76%)
Frame = +2 / +3
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
R GPEEG GPAAVV+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQ
Sbjct: 36 RHGPEEG*GPAAVVQAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQ 215
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
A+HP LRAS+DQ + + GH G DG H D +PAD+HQGNQ++R
Sbjct: 216 ADHPVRALRASQDQWILGTGGH*GSDGKGAHKDDRCSFQPADIHQGNQHMR 368
Score = 119 bits (255), Expect(2) = 5e-039
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = -1 / -3
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE T I M P AI+SLMA RA++PLILRRSE +GVICLYLGTSES+
Sbjct: 368 PHVLVALVYICWLE*TAIILMSPLAIRSLMAPRAKDPLILRRSESTDGVICLYLGTSESN 189
Query: 217 LS*VAWSNSTA 185
LS*VAWS STA
Sbjct: 188 LS*VAWSKSTA 156
Score = 118 bits (253), Expect = 8e-026
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -3 / -2
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++ DHP E HQ+L+GPP +G++DP+TLGE GRGDLLVLG+L EQLV
Sbjct: 363 CVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLV 184
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 183 VGGLVEEH 160
Score = 62.9 bits (131), Expect(2) = 5e-039
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RT PA TTAAGP PSSGP R
Sbjct: 148 PSPSAYPCSTSSSSASRLRT*PAWTTAAGPYPSSGPWR 35
>gb|CX608695.1|CX608695 ANR1_40_E04.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone
ANR1_40_E04_A002 3', mRNA sequence
Length = 515
Score = 161 bits (346), Expect = 1e-038
Identities = 70/74 (94%), Positives = 73/74 (98%)
Frame = +3 / +2
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLAR AIKDLMARGLIRM++VH
Sbjct: 125 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARGAIKDLMARGLIRMIAVH 304
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 305 SSQQIYTRATNT*G 346
Score = 158 bits (339), Expect = 1e-037
Identities = 69/111 (62%), Positives = 85/111 (76%)
Frame = +2 / +1
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
R GPEEG GPAAVV+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQ
Sbjct: 13 RHGPEEG*GPAAVVQAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQ 192
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
A+HP LRAS+DQ + + GH G DG H D +PAD+HQGNQ++R
Sbjct: 193 ADHPVRALRASQDQWILGTGGH*GSDGKGAHKDDRCSFQPADIHQGNQHMR 345
Score = 119 bits (255), Expect(2) = 5e-039
Identities = 54/71 (76%), Positives = 60/71 (84%)
Frame = -1 / -3
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE T I M P AI+SLMA RA++PLILRRSE +GVICLYLGTSES+
Sbjct: 345 PHVLVALVYICWLE*TAIILMSPLAIRSLMAPRAKDPLILRRSESTDGVICLYLGTSESN 166
Query: 217 LS*VAWSNSTA 185
LS*VAWS STA
Sbjct: 165 LS*VAWSKSTA 133
Score = 118 bits (253), Expect = 8e-026
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -3 / -2
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++ DHP E HQ+L+GPP +G++DP+TLGE GRGDLLVLG+L EQLV
Sbjct: 340 CVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLV 161
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 160 VGGLVEEH 137
Score = 62.9 bits (131), Expect(2) = 5e-039
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RT PA TTAAGP PSSGP R
Sbjct: 125 PSPSAYPCSTSSSSASRLRT*PAWTTAAGPYPSSGPWR 12
>gb|BE593343.1|BE593343 WS1_100_F02.g1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 329
Score = 157 bits (338), Expect = 1e-037
Identities = 68/72 (94%), Positives = 71/72 (98%)
Frame = +3 / +2
Query: 183 NAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSS 362
N VLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRAIKDLMARGLIRM++VHSS
Sbjct: 2 NPVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAIKDLMARGLIRMIAVHSS 181
Query: 363 QQIYTRATNT*G 398
QQIYTRATNT*G
Sbjct: 182 QQIYTRATNT*G 217
Score = 121 bits (258), Expect = 2e-026
Identities = 54/70 (77%), Positives = 60/70 (85%)
Frame = -1 / -3
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE T I M P AI+SLMALRA++PLILRRSE +GVICLYLGTSES+
Sbjct: 216 PHVLVALVYICWLE*TAIILMSPLAIRSLMALRAKDPLILRRSESTDGVICLYLGTSESN 37
Query: 217 LS*VAWSNST 188
LS*VAWS ST
Sbjct: 36 LS*VAWSKST 7
Score = 118 bits (253), Expect = 8e-026
Identities = 46/68 (67%), Positives = 57/68 (83%)
Frame = -3 / -2
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++ DHP E HQ+L+GPP +G++DP+TLGE GRGDLLVLG+L EQLV
Sbjct: 211 CVGCPGVYLLAGMNSDHPYEPPCHQILNGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLV 32
Query: 212 VGSLVEQH 189
VG LVE+H
Sbjct: 31 VGGLVEEH 8
>gb|CN137437.1|CN137437 OX1_57_F09.b1_A002 Oxidatively-stressed leaves and roots Sorghum
bicolor cDNA clone OX1_57_F09_A002 3', mRNA sequence
Length = 471
Score = 153 bits (328), Expect = 4e-036
Identities = 67/74 (90%), Positives = 70/74 (94%)
Frame = +3 / +2
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVH 356
VNN VLFDQ T+DKL+SEVPKYKQITPS+LSERLRINGS ARRAIKDL ARGLIRMVSVH
Sbjct: 71 VNNLVLFDQPTFDKLVSEVPKYKQITPSVLSERLRINGSSARRAIKDLTARGLIRMVSVH 250
Query: 357 SSQQIYTRATNT*G 398
SSQQIYTRATNT*G
Sbjct: 251 SSQQIYTRATNT*G 292
Score = 138 bits (296), Expect = 9e-032
Identities = 59/97 (60%), Positives = 74/97 (76%)
Frame = +2 / +1
Query: 107 EAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASEDQ 286
+AGQVR +A+EEEVEQG A+GEG+Q GA+RP +LRQ L GAQVQA+HP PLRAS+D
Sbjct: 1 QAGQVRRREAEEEEVEQG*AEGEGQQLGALRPAHLRQVGLRGAQVQADHPIRPLRASQD* 180
Query: 287 RLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIR 397
+ +EGH G DG H DGL +PAD+HQGNQ++R
Sbjct: 181 WILGTEGH*GSDGKGAHKDGLCSFQPADIHQGNQHMR 291
Score = 122 bits (261), Expect(2) = 3e-034
Identities = 53/70 (75%), Positives = 60/70 (85%)
Frame = -1 / -1
Query: 397 PYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVICLYLGTSESS 218
P+VLVALV ICWLE TETI M P A++SLMALRA +PLILRRSER +GVICLYLGTSE++
Sbjct: 291 PHVLVALVYICWLE*TETILMSPLAVRSLMALRAEDPLILRRSERTDGVICLYLGTSETN 112
Query: 217 LS*VAWSNST 188
LS V WS ST
Sbjct: 111 LSKVGWSKST 82
Score = 114 bits (244), Expect = 1e-024
Identities = 44/68 (64%), Positives = 56/68 (82%)
Frame = -3 / -3
Query: 392 CIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLV 213
C+GCPGV LLA ++RDHP E Q+L+GPP +G+++P+TLGEDG GDLLVLGHL +QLV
Sbjct: 286 CVGCPGVYLLAGMNRDHPYEPPCRQILNGPPCRGSINPETLGEDGWGDLLVLGHLGDQLV 107
Query: 212 VGSLVEQH 189
G LVE+H
Sbjct: 106 EGGLVEEH 83
Score = 44.1 bits (90), Expect(2) = 3e-034
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = -2 / -2
Query: 177 PSPLAFPCSTSSSFACHHRTWPA 109
PSP A+PCSTSSS A RTWPA
Sbjct: 71 PSPSAYPCSTSSSSASRLRTWPA 3
>gb|BF656971.1|BF656971 OV2_19_D04.b1_A002 Ovary 2 (OV2) Sorghum bicolor cDNA, mRNA
sequence
Length = 360
Score = 138 bits (295), Expect(3) = 3e-035
Identities = 58/66 (87%), Positives = 61/66 (92%)
Frame = +3 / -3
Query: 231 VPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSVHSSQQIYTRATNT*GWGRG 410
VPKYKQITPS+LSERLRINGSLARRAIKDLMARG IRMV+VHSSQQIYTRATNT*GWGR
Sbjct: 358 VPKYKQITPSVLSERLRINGSLARRAIKDLMARGFIRMVAVHSSQQIYTRATNT*GWGRA 179
Query: 411 LKCIVC 428
C +C
Sbjct: 178 CICPLC 161
Score = 130 bits (279), Expect(3) = 5e-035
Identities = 53/59 (89%), Positives = 55/59 (93%)
Frame = -3 / +2
Query: 407 SSPSLCIGCPGVDLLA*VDRDHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGH 231
SSPSL IGCPGVDLLA*VD DHP+EATRHQVLDGPPSKGA+DPQ LGEDG GDLLVLGH
Sbjct: 182 SSPSLGIGCPGVDLLA*VDSDHPDEATRHQVLDGPPSKGAIDPQALGEDGGGDLLVLGH 358
Score = 128 bits (275), Expect(2) = 5e-030
Identities = 55/66 (83%), Positives = 58/66 (87%)
Frame = -1 / +3
Query: 427 QTMHFRPLPHPYVLVALV*ICWLEWTETIRMRPRAIKSLMALRAREPLILRRSERMEGVI 248
Q + LPHP VLVALV*ICWLEWT TIRM+PRAIKSLMALRAREPLIL+RSER EGVI
Sbjct: 162 QRGQIQALPHP*VLVALV*ICWLEWTATIRMKPRAIKSLMALRAREPLILKRSERTEGVI 341
Query: 247 CLYLGT 230
CLYLGT
Sbjct: 342 CLYLGT 359
Score = 125 bits (268), Expect(2) = 1e-031
Identities = 49/59 (83%), Positives = 51/59 (86%)
Frame = +2 / -2
Query: 230 GAQVQANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSDGLGPLKPADLHQGNQYIRMGK 406
GAQVQA+HP PLRA EDQ LPCSEGHQGLDGAW H DG PLKPADLHQGNQY+RMGK
Sbjct: 359 GAQVQADHPLRPLRALEDQWLPCSEGHQGLDGAWLHPDGRCPLKPADLHQGNQYLRMGK 183
Score = 109 bits (232), Expect = 6e-023
Identities = 45/53 (84%), Positives = 46/53 (86%)
Frame = -2 / +1
Query: 408 LFPILMYWLPWCRSAGLSGPRPSE*GHAPSSP*WPSEQGSR*SSDARRGWKG* 250
LFPIL YWLPWCRSAGLSG RPS * HAPSSP*WPSEQGS *SS ARRG +G*
Sbjct: 181 LFPILRYWLPWCRSAGLSGQRPSG*SHAPSSP*WPSEQGSH*SSSARRGRRG* 339
Score = 32.2 bits (64), Expect(2) = 1e-031
Identities = 17/27 (62%), Positives = 17/27 (62%)
Frame = +3 / -3
Query: 402 GRGLKCIVCPLCRRSSSLEQLPSLSRV 482
G G CI R SSSLEQL SLSRV
Sbjct: 193 GWGRACICPLCSRSSSSLEQLSSLSRV 113
Score = 32.2 bits (64), Expect(3) = 5e-035
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1 / +3
Query: 481 TLDKDGNCSKDELLLQRGQTMHFRPLP 401
TLDKD NCSKD+ LL + + P P
Sbjct: 114 TLDKDDNCSKDDELLLQRGQIQALPHP 194
Score = 25.8 bits (50), Expect(3) = 3e-035
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1 / -1
Query: 451 L*NSCHLCQE 480
L*+SCHLCQE
Sbjct: 144 L*SSCHLCQE 115
Score = 24.4 bits (47), Expect(3) = 5e-035
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 544 YSKSLKCCRHLELIT 500
YSKSLKC H +T
Sbjct: 57 YSKSLKCFSHRSQVT 101
Score = 24.0 bits (46), Expect(3) = 3e-035
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3 / -3
Query: 522 QHFRDFEYFY*LVLWFANY 578
+HFRDFEY ++ NY
Sbjct: 79 KHFRDFEY*LCTMVCLINY 23
Score = 23.5 bits (45), Expect(2) = 5e-030
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -1 / +3
Query: 469 DGNCSKDELLLQRGQ 425
D DELLLQRGQ
Sbjct: 129 DNCSKDDELLLQRGQ 173
>gb|BE593549.1|BE593549 WS1_100_F02.b1_A002 Water-stressed 1 (WS1) Sorghum bicolor cDNA,
mRNA sequence
Length = 325
Score = 139 bits (298), Expect = 5e-032
Identities = 61/93 (65%), Positives = 73/93 (78%)
Frame = +2 / +1
Query: 65 RDGPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQ 244
R GPEEG GPAAVV+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQ
Sbjct: 37 RHGPEEG*GPAAVVQAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQ 216
Query: 245 ANHPFHPLRASEDQRLPCSEGHQGLDGAWPHSD 343
A+HP LRAS+DQ + +EGH G DG H D
Sbjct: 217 ADHPVRALRASQDQWILGTEGHXGSDGKGAHKD 315
Score = 125 bits (268), Expect = 7e-028
Identities = 54/59 (91%), Positives = 57/59 (96%)
Frame = +3 / +2
Query: 177 VNNAVLFDQATYDKLLSEVPKYKQITPSILSERLRINGSLARRAIKDLMARGLIRMVSV 353
VNNAVLFDQATYDKLLSEVPKYKQITPS+LSERLRINGSLARRA DLMARGLIRM++V
Sbjct: 149 VNNAVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAXXDLMARGLIRMIAV 325
Score = 95.0 bits (201), Expect(2) = 1e-031
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = -3 / -1
Query: 347 DHPNEATRHQVLDGPPSKGAVDPQTLGEDGRGDLLVLGHLREQLVVGSLVEQH 189
DHP E HQ+L GPP +G++DP+TLGE GRGDLLVLG+L EQLVVG LVE+H
Sbjct: 319 DHPYEPPCHQILXGPPCQGSIDPETLGEHGRGDLLVLGNLGEQLVVGGLVEEH 161
Score = 62.9 bits (131), Expect(2) = 1e-031
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RT PA TTAAGP PSSGP R
Sbjct: 149 PSPSAYPCSTSSSSASRLRT*PAWTTAAGPYPSSGPWR 36
>gb|BZ342419.1|BZ342419 ic83d06.b1 WGS-SbicolorF (JM107 adapted methyl filtered) Sorghum
bicolor genomic clone ic83d06 5', DNA sequence
Length = 694
Score = 123 bits (263), Expect = 3e-027
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +2 / +1
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
GPEEG+GPAAVV+AGQVR +A+EEEVEQG A+GEG+Q GA+RPG+LRQ L GAQVQA+
Sbjct: 412 GPEEGEGPAAVVQAGQVRRREAEEEEVEQG*AEGEGQQLGALRPGHLRQVGLRGAQVQAD 591
Query: 251 HPFHPLRASEDQRLPCSEGH 310
HP PLRAS+ S+ H
Sbjct: 592 HPIRPLRASQGNVTSYSQLH 651
Score = 71.6 bits (150), Expect(2) = 1e-024
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RTWPA TTAAGP PSSGP R
Sbjct: 518 PSPSAYPCSTSSSSASRLRTWPAWTTAAGPSPSSGPER 405
Score = 62.9 bits (131), Expect(2) = 1e-024
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -1 / -2
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNST 188
+ LRRSER +GVICLYLGTSE++LS*VAWS ST
Sbjct: 627 ITLRRSERTDGVICLYLGTSETNLS*VAWSKST 529
>gb|BZ628144.1|BZ628144 ih58b12.b1 WGS-SbicolorF (DH5a methyl filtered) Sorghum bicolor
genomic clone ih58b12 5', DNA sequence
Length = 828
Score = 123 bits (263), Expect = 3e-027
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +2 / -1
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
GPEEG+GPAAVV+AGQVR +A+EEEVEQG A+GEG+Q GA+RPG+LRQ L GAQVQA+
Sbjct: 582 GPEEGEGPAAVVQAGQVRRREAEEEEVEQG*AEGEGQQLGALRPGHLRQVGLRGAQVQAD 403
Query: 251 HPFHPLRASEDQRLPCSEGH 310
HP PLRAS+ S+ H
Sbjct: 402 HPIRPLRASQGNVTSYSQLH 343
Score = 71.6 bits (150), Expect(2) = 1e-024
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -2 / +2
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RTWPA TTAAGP PSSGP R
Sbjct: 476 PSPSAYPCSTSSSSASRLRTWPAWTTAAGPSPSSGPER 589
Score = 62.9 bits (131), Expect(2) = 1e-024
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -1 / +1
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNST 188
+ LRRSER +GVICLYLGTSE++LS*VAWS ST
Sbjct: 367 ITLRRSERTDGVICLYLGTSETNLS*VAWSKST 465
>gb|CW281247.1|CW281247 104_756_11408071_148_35453_018 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11408071, DNA
sequence
Length = 607
Score = 123 bits (263), Expect = 3e-027
Identities = 53/80 (66%), Positives = 64/80 (80%)
Frame = +2 / -2
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
GPEEG+GPAAVV+AGQVR +A+EEEVEQG A+GEG+Q GA+RPG+LRQ L GAQVQA+
Sbjct: 504 GPEEGEGPAAVVQAGQVRRREAEEEEVEQG*AEGEGQQLGALRPGHLRQVGLRGAQVQAD 325
Query: 251 HPFHPLRASEDQRLPCSEGH 310
HP PLRAS+ S+ H
Sbjct: 324 HPIRPLRASQGNVTSYSQLH 265
Score = 71.6 bits (150), Expect(2) = 1e-024
Identities = 29/38 (76%), Positives = 30/38 (78%)
Frame = -2 / +2
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RTWPA TTAAGP PSSGP R
Sbjct: 398 PSPSAYPCSTSSSSASRLRTWPAWTTAAGPSPSSGPER 511
Score = 62.9 bits (131), Expect(2) = 1e-024
Identities = 26/33 (78%), Positives = 30/33 (90%)
Frame = -1 / +1
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNST 188
+ LRRSER +GVICLYLGTSE++LS*VAWS ST
Sbjct: 289 ITLRRSERTDGVICLYLGTSETNLS*VAWSKST 387
>gb|CW052881.1|CW052881 104_292_10515660_115_30287 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10515660, DNA
sequence
Length = 742
Score = 81.7 bits (172), Expect(2) = 4e-025
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +2 / -2
Query: 146 EVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASE 280
EVEQG AKGEG+QR AVRPG+LRQAAL GAQVQA+HP PLRA E
Sbjct: 402 EVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQADHPLRPLRALE 268
Score = 70.3 bits (147), Expect(3) = 1e-026
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1 / +1
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNSTA 185
+ L+RSER EGVICLYLGTSESSLS*VAWSNSTA
Sbjct: 262 ITLKRSERTEGVICLYLGTSESSLS*VAWSNSTA 363
Score = 60.2 bits (125), Expect(3) = 1e-026
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / +1
Query: 144 SSFACHHRTWPASTTAAGPCPSSGPSR 64
SS ACH RTW ASTTAAGPCPSSGP R
Sbjct: 499 SSSACHRRTWRASTTAAGPCPSSGPVR 579
Score = 54.2 bits (112), Expect(2) = 4e-025
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2 / -3
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEE 145
GPEEGQGPAAVVEA QVR WQA+EE
Sbjct: 572 GPEEGQGPAAVVEARQVRRWQAEEE 498
Score = 28.1 bits (55), Expect(3) = 1e-026
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / +2
Query: 177 PSPLAFPCSTSS 142
PSP A+PCSTS+
Sbjct: 371 PSPFAYPCSTSA 406
>gb|CW408461.1|CW408461 fsbb001f102f20f0 Sorghum methylation filtered library (LibID: 104)
Sorghum bicolor genomic clone fsbb001f102f20, DNA
sequence
Length = 698
Score = 81.7 bits (172), Expect(2) = 4e-025
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +2 / +2
Query: 146 EVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASE 280
EVEQG AKGEG+QR AVRPG+LRQAAL GAQVQA+HP PLRA E
Sbjct: 227 EVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQADHPLRPLRALE 361
Score = 70.3 bits (147), Expect(3) = 1e-026
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1 / -2
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNSTA 185
+ L+RSER EGVICLYLGTSESSLS*VAWSNSTA
Sbjct: 367 ITLKRSERTEGVICLYLGTSESSLS*VAWSNSTA 266
Score = 60.2 bits (125), Expect(3) = 1e-026
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / -2
Query: 144 SSFACHHRTWPASTTAAGPCPSSGPSR 64
SS ACH RTW ASTTAAGPCPSSGP R
Sbjct: 130 SSSACHRRTWRASTTAAGPCPSSGPVR 50
Score = 54.2 bits (112), Expect(2) = 4e-025
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2 / +3
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEE 145
GPEEGQGPAAVVEA QVR WQA+EE
Sbjct: 57 GPEEGQGPAAVVEARQVRRWQAEEE 131
Score = 28.1 bits (55), Expect(3) = 1e-026
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSS 142
PSP A+PCSTS+
Sbjct: 258 PSPFAYPCSTSA 223
>gb|CW310460.1|CW310460 104_799_11469725_148_35749_021 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11469725, DNA
sequence
Length = 655
Score = 81.7 bits (172), Expect(2) = 4e-025
Identities = 36/45 (80%), Positives = 39/45 (86%)
Frame = +2 / +2
Query: 146 EVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASE 280
EVEQG AKGEG+QR AVRPG+LRQAAL GAQVQA+HP PLRA E
Sbjct: 224 EVEQG*AKGEGEQRCAVRPGHLRQAAL*GAQVQADHPLRPLRALE 358
Score = 70.3 bits (147), Expect(3) = 1e-026
Identities = 30/34 (88%), Positives = 32/34 (94%)
Frame = -1 / -1
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNSTA 185
+ L+RSER EGVICLYLGTSESSLS*VAWSNSTA
Sbjct: 364 ITLKRSERTEGVICLYLGTSESSLS*VAWSNSTA 263
Score = 60.2 bits (125), Expect(3) = 1e-026
Identities = 23/27 (85%), Positives = 23/27 (85%)
Frame = -2 / -1
Query: 144 SSFACHHRTWPASTTAAGPCPSSGPSR 64
SS ACH RTW ASTTAAGPCPSSGP R
Sbjct: 127 SSSACHRRTWRASTTAAGPCPSSGPVR 47
Score = 54.2 bits (112), Expect(2) = 4e-025
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2 / +3
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEE 145
GPEEGQGPAAVVEA QVR WQA+EE
Sbjct: 54 GPEEGQGPAAVVEARQVRRWQAEEE 128
Score = 28.1 bits (55), Expect(3) = 1e-026
Identities = 9/12 (75%), Positives = 11/12 (91%)
Frame = -2 / -2
Query: 177 PSPLAFPCSTSS 142
PSP A+PCSTS+
Sbjct: 255 PSPFAYPCSTSA 220
>gb|CW321435.1|CW321435 104_814_11475549_148_35938_083 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11475549, DNA
sequence
Length = 664
Score = 106 bits (227), Expect(2) = 2e-025
Identities = 45/62 (72%), Positives = 53/62 (85%)
Frame = +2 / +3
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
GPEEG+GPAAVV+AGQVR +A+EEEVEQG A+GEG+Q GA+RPG+LRQ L GAQVQA
Sbjct: 18 GPEEGEGPAAVVQAGQVRRREAEEEEVEQGYAEGEGQQLGALRPGHLRQVGLRGAQVQAE 197
Query: 251 HP 256
P
Sbjct: 198 SP 203
Score = 69.3 bits (145), Expect(3) = 1e-021
Identities = 28/36 (77%), Positives = 29/36 (80%)
Frame = -2 / -1
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGP 70
PSP A+PCSTSSS A RTWPA TTAAGP PSSGP
Sbjct: 124 PSPSAYPCSTSSSSASRLRTWPAWTTAAGPSPSSGP 17
Score = 43.7 bits (89), Expect(3) = 1e-021
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = -1 / -3
Query: 256 GVICLYLGTSESSLS*VAWSNST 188
G CLYLGTSE++LS*VAWS ST
Sbjct: 203 G*FCLYLGTSETNLS*VAWSKST 135
Score = 29.9 bits (59), Expect(2) = 2e-025
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +3 / +2
Query: 234 PKYKQITPSILSERLRI 284
P +ITPS+LSERLR+
Sbjct: 182 PSTSRITPSVLSERLRV 232
Score = 28.6 bits (56), Expect(3) = 1e-021
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1 / -2
Query: 286 LILRRSERMEGVICLYLG 233
+ LRRSER +GVI L LG
Sbjct: 234 ITLRRSERTDGVILLVLG 181
>gb|CW056425.1|CW056425 104_298_10517676_115_30157 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10517676, DNA
sequence
Length = 414
Score = 115 bits (245), Expect = 1e-024
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +2 / -3
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
GPEEG GPAAVV+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQA+
Sbjct: 412 GPEEG*GPAAVVQAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQAD 233
Query: 251 HPFHPLRASE 280
HP LRAS+
Sbjct: 232 HPVRALRASQ 203
Score = 63.4 bits (132), Expect(2) = 6e-022
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = -1 / +2
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNSTA 185
+ LRRSE +GVICLYLGTSES+LS*VAWS STA
Sbjct: 197 ITLRRSESTDGVICLYLGTSESNLS*VAWSKSTA 298
Score = 62.0 bits (129), Expect(2) = 6e-022
Identities = 27/36 (75%), Positives = 28/36 (77%)
Frame = -2 / +3
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGP 70
PSP A+PCSTSSS A RT PA TTAAGP PSSGP
Sbjct: 306 PSPSAYPCSTSSSSASRLRT*PAWTTAAGPYPSSGP 413
>gb|CW058776.1|CW058776 104_301_10518927_114_30160 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 10518927, DNA
sequence
Length = 609
Score = 115 bits (245), Expect = 1e-024
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +2 / -1
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
GPEEG GPAAVV+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQA+
Sbjct: 240 GPEEG*GPAAVVQAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQAD 61
Query: 251 HPFHPLRASE 280
HP LRAS+
Sbjct: 60 HPVRALRASQ 31
Score = 64.3 bits (134), Expect(2) = 1e-022
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / +2
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RT PA TTAAGP PSSGP R
Sbjct: 134 PSPSAYPCSTSSSSASRLRT*PAWTTAAGPYPSSGPER 247
Score = 63.4 bits (132), Expect(2) = 1e-022
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = -1 / +1
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNSTA 185
+ LRRSE +GVICLYLGTSES+LS*VAWS STA
Sbjct: 25 ITLRRSESTDGVICLYLGTSESNLS*VAWSKSTA 126
>gb|CW200534.1|CW200534 104_626_11184106_148_36867_045 Sorghum methylation filtered library
(LibID: 104) Sorghum bicolor genomic clone 11184106, DNA
sequence
Length = 714
Score = 115 bits (245), Expect = 1e-024
Identities = 50/70 (71%), Positives = 60/70 (85%)
Frame = +2 / +3
Query: 71 GPEEGQGPAAVVEAGQVRWWQAKEEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQAN 250
GPEEG GPAAVV+AG VR +A+EEEVEQG A+GEG+QRGA+RPG+LRQ AL G+QVQA+
Sbjct: 30 GPEEG*GPAAVVQAG*VRRREAEEEEVEQG*AEGEGQQRGALRPGHLRQVALRGSQVQAD 209
Query: 251 HPFHPLRASE 280
HP LRAS+
Sbjct: 210 HPVRALRASQ 239
Score = 64.3 bits (134), Expect(2) = 1e-022
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 177 PSPLAFPCSTSSSFACHHRTWPASTTAAGPCPSSGPSR 64
PSP A+PCSTSSS A RT PA TTAAGP PSSGP R
Sbjct: 136 PSPSAYPCSTSSSSASRLRT*PAWTTAAGPYPSSGPER 23
Score = 63.4 bits (132), Expect(2) = 1e-022
Identities = 27/34 (79%), Positives = 30/34 (88%)
Frame = -1 / -2
Query: 286 LILRRSERMEGVICLYLGTSESSLS*VAWSNSTA 185
+ LRRSE +GVICLYLGTSES+LS*VAWS STA
Sbjct: 245 ITLRRSESTDGVICLYLGTSESNLS*VAWSKSTA 144
>gb|CD211819.1|CD211819 HS1_64_B01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA
clone HS1_64_B01_A012 5', mRNA sequence
Length = 551
Score = 88.1 bits (186), Expect(3) = 2e-022
Identities = 36/47 (76%), Positives = 42/47 (89%)
Frame = +2 / +2
Query: 140 EEEVEQGKAKGEGKQRGAVRPGYLRQAALGGAQVQANHPFHPLRASE 280
EEEVEQG AKGEG++RGAVRPG+LRQA+L GAQVQA+HP P+RA E
Sbjct: 155 EEEVEQG*AKGEGEERGAVRPGHLRQASLSGAQVQADHPLRPVRALE 295
Score = 29.5 bits (58), Expect(3) = 2e-022
Identities = 10/10 (100%), Positives = 10/10 (100%)
Frame = +2 / +1
Query: 65 RDGPEEGQGP 94
RDGPEEGQGP
Sbjct: 85 RDGPEEGQGP 114
Score = 27.2 bits (53), Expect(3) = 2e-022
Identities = 11/15 (73%), Positives = 12/15 (80%)
Frame = +2 / +2
Query: 101 VVEAGQVRWWQAKEE 145
VVEA QVR WQ +EE
Sbjct: 119 VVEARQVRRWQVEEE 163
Database: Sorghum_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:54 PM
Number of letters in database: 491,359,669
Number of sequences in database: 832,831
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 755,304,058
Number of Sequences: 832831
Number of extensions: 10947880
Number of successful extensions: 106497
Number of sequences better than 1.0e-020: 31
length of database: 163,786,556
effective HSP length: 54
effective length of database: 118,813,682
effective search space used: 23287481672
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)