TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QCK30g08.yg.2.1
(164 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
***** No hits found ******
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.317 0.142 0.459
Matrix: BLOSUM62
Number of Hits to DB: 84,755,091
Number of Sequences: 369679
Number of extensions: 838557
Number of successful extensions: 128856
Number of sequences better than 1.0e-020: 0
length of database: 67,802,888
effective HSP length: 40
effective length of database: 53,015,728
effective search space used: 742220192
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)