TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBS5e09.xg.2.1
(723 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-... 130 6e-047
gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA libr... 120 2e-043
gb|DT477027.1|DT477027 WS01231.B21_L09 PT-GT-FL-A-3 Populus... 108 7e-038
gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambiu... 125 5e-036
gb|DT516411.1|DT516411 WS02431.B21_E19 PTxD-ICC-N-A-14 Popu... 98 2e-035
gb|CV257201.1|CV257201 WS0245.B21_P10 PTxD-ICC-N-A-14 Popul... 98 3e-035
gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Popu... 100 8e-035
gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDN... 101 2e-034
gb|DT510522.1|DT510522 WS02426.BR_M15 PTxD-ICC-N-A-14 Popul... 93 7e-034
gb|CV271864.1|CV271864 WS0155.B21_O06 PTxN-IB-A-6 Populus t... 143 1e-033
gb|DN500518.1|DN500518 UL60PB12.5pR Populus cold stressed l... 100 2e-033
gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated wi... 94 2e-033
gb|CV229269.1|CV229269 WS01912.B21_M05 PT-DX-N-A-10 Populus... 93 5e-033
gb|CX178016.1|CX178016 G09_45-81_13.ab1 leaf inoculated wit... 94 7e-033
gb|CX183741.1|CX183741 A09_45-83_01.ab1 leaf inoculated wit... 94 7e-033
gb|CX180397.1|CX180397 C08_45-107_06.ab1 leaf inoculated wi... 94 7e-033
gb|CX180523.1|CX180523 A03_45-107_01.ab1 leaf inoculated wi... 94 7e-033
gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus ... 96 2e-032
gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populu... 100 3e-032
gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus t... 100 3e-032
gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populu... 100 3e-032
gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Popul... 100 3e-032
gb|BP934618.1|BP934618 BP934618 full-length enriched poplar... 112 6e-032
gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremonti... 96 2e-031
gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Popu... 93 2e-030
gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus... 98 4e-030
gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus ... 98 4e-030
gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus... 98 4e-030
gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus ... 98 4e-030
gb|CV235889.1|CV235889 WS01221.B21_P24 PT-GT-FL-A-3 Populus... 94 4e-030
gb|AJ772854.1|AJ772854 AJ772854 Populus euphratica leaf 3-6... 82 5e-030
gb|BP931106.1|BP931106 BP931106 full-length enriched poplar... 130 1e-029
gb|BP935319.1|BP935319 BP935319 full-length enriched poplar... 130 1e-029
gb|CN520132.1|CN520132 GQ0106.B3_K07 GQ010 Populus trichoca... 94 2e-029
gb|CV234524.1|CV234524 WS01215.B21.1_D13 PT-GT-FL-A-3 Popul... 94 2e-029
gb|BP932015.1|BP932015 BP932015 full-length enriched poplar... 129 3e-029
gb|DT476162.1|DT476162 WS01228.B21_I22 PT-GT-FL-A-3 Populus... 94 3e-029
gb|CV236193.1|CV236193 WS01223.B21_D08 PT-GT-FL-A-3 Populus... 94 3e-029
gb|CV233333.1|CV233333 WS0121.B21_P12 PT-GT-FL-A-3 Populus ... 94 3e-029
gb|CV233345.1|CV233345 WS01210.B21_A08 PT-GT-FL-A-3 Populus... 94 3e-029
gb|CV236341.1|CV236341 WS01223.B21_M04 PT-GT-FL-A-3 Populus... 94 6e-029
gb|CK091588.1|CK091588 F109P71.3pR Populus flower cDNA libr... 91 3e-028
gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed l... 100 3e-028
gb|DN489285.1|DN489285 T020F04.3pR Populus shoot meristem c... 82 4e-028
gb|CV282585.1|CV282585 WS0185.B21_A14 PTxD-IL-N-A-9 Populus... 94 7e-028
gb|DT483477.1|DT483477 WS02522.B21_L06 PT-MB-N-A-15 Populus... 83 1e-027
gb|DN485267.1|DN485267 M123B10.3pR Populus female catkins c... 83 1e-027
gb|CV255664.1|CV255664 WS02414.B21_K19 PTxD-ICC-N-A-14 Popu... 98 1e-027
gb|BI122417.1|BI122417 I006P43P Populus leaf cDNA library P... 76 2e-027
gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus... 93 1e-026
gb|BU809640.1|BU809640 UL60PB12 Populus leaf cDNA library P... 75 8e-026
gb|BI129088.1|BI129088 G085P75Y Populus cambium cDNA librar... 71 2e-025
gb|CA927209.1|CA927209 MTU6CR.P6.C10 Aspen root cDNA Librar... 96 3e-025
gb|CV283880.1|CV283880 WS0188.B21_I18 PTxD-IL-N-A-9 Populus... 90 3e-025
gb|CV236386.1|CV236386 WS01223.B21_O16 PT-GT-FL-A-3 Populus... 89 4e-025
gb|DT515153.1|DT515153 WS02426.B21_M15 PTxD-ICC-N-A-14 Popu... 81 1e-024
gb|CK108357.1|CK108357 GO85P75 Populus tension wood cDNA li... 67 1e-024
gb|DT488662.1|DT488662 WS02537.B21_B03 PT-MB-N-A-15 Populus... 93 1e-024
gb|CV244554.1|CV244554 WS0254.B21_P16 PT-MB-N-A-15 Populus ... 93 1e-024
gb|CV243415.1|CV243415 WS02518.B21_N01 PT-MB-N-A-15 Populus... 80 6e-024
gb|CV257070.1|CV257070 WS0245.B21_J10 PTxD-ICC-N-A-14 Popul... 89 9e-024
gb|DT486941.1|DT486941 WS02532.B21_F17 PT-MB-N-A-15 Populus... 83 1e-023
gb|CV239371.1|CV239371 WS0232.B21_D04 PT-MB-A-13 Populus tr... 83 1e-023
gb|DV463551.1|DV463551 MTUNUL1.P17.D07 NUL Populus fremonti... 90 1e-023
gb|CV240216.1|CV240216 WS0234.B21_M06 PT-MB-A-13 Populus tr... 83 1e-023
gb|AJ767578.1|AJ767578 AJ767578 Populus euphratica leaf adu... 75 2e-023
gb|DT505915.1|DT505915 WS01812.C21_D06 PTxD-IL-N-A-9 Populu... 90 4e-023
gb|DT487275.1|DT487275 WS02533.B21_E03 PT-MB-N-A-15 Populus... 82 6e-023
gb|CV254866.1|CV254866 WS02411.B21_G17 PTxD-ICC-N-A-14 Popu... 90 6e-023
gb|CV243556.1|CV243556 WS0252.B21_D08 PT-MB-N-A-15 Populus ... 82 6e-023
gb|CV240272.1|CV240272 WS0234.B21_P01 PT-MB-A-13 Populus tr... 87 6e-023
gb|CV258292.1|CV258292 WS0249.B21_B21 PTxD-ICC-N-A-14 Popul... 96 6e-023
gb|CF119195.1|CF119195 MTU10CS.P14.F09 Aspen stem cDNA Libr... 71 7e-023
gb|CV243458.1|CV243458 WS02518.B21_O24 PT-MB-N-A-15 Populus... 87 8e-023
gb|CV256857.1|CV256857 WS0244.B21_P21 PTxD-ICC-N-A-14 Popul... 70 8e-023
gb|DN492164.1|DN492164 V051F01.3pR Populus male catkins cDN... 83 1e-022
gb|CK110405.1|CK110405 N056F06 Populus bark cDNA library Po... 82 1e-022
gb|CA923539.1|CA923539 MTU7CL.P11.G02 Aspen leaf cDNA Libra... 83 1e-022
gb|AJ774684.1|AJ774684 AJ774684 Populus euphratica shoot 3-... 81 1e-022
gb|CX172393.1|CX172393 D04_69-43_08.ab1 leaf inoculated wit... 70 1e-022
gb|CV243768.1|CV243768 WS0252.B21_M19 PT-MB-N-A-15 Populus ... 90 1e-022
gb|DT476446.1|DT476446 WS01229.B21_J24 PT-GT-FL-A-3 Populus... 97 2e-022
gb|CV245243.1|CV245243 WS0256.B21_N22 PT-MB-N-A-15 Populus ... 86 3e-022
gb|CV280250.1|CV280250 WS0135.B21_I11 PTxD-IL-FL-A-4 Populu... 85 3e-022
gb|DT504462.1|DT504462 WS01313.B21_H10 PTxD-IL-FL-A-4 Popul... 76 3e-022
gb|CV283278.1|CV283278 WS0186.B21_O12 PTxD-IL-N-A-9 Populus... 87 4e-022
gb|CK103946.1|CK103946 I006P43.5pR Populus senescing leaves... 73 7e-022
gb|DN485934.1|DN485934 N054A04.3pR Populus bark cDNA librar... 81 9e-022
gb|CF119424.1|CF119424 MTU10CS.P1.F09 Aspen stem cDNA Libra... 66 1e-021
gb|DT515014.1|DT515014 WS02426.B21_G13 PTxD-ICC-N-A-14 Popu... 70 2e-021
gb|DT488279.1|DT488279 WS02535.B21_P22 PT-MB-N-A-15 Populus... 68 2e-021
gb|CV245251.1|CV245251 WS0256.B21_O06 PT-MB-N-A-15 Populus ... 68 2e-021
gb|DT488152.1|DT488152 WS02535.B21_K09 PT-MB-N-A-15 Populus... 80 2e-021
gb|DT512168.1|DT512168 WS02418.B21_I18 PTxD-ICC-N-A-14 Popu... 68 2e-021
gb|CF119369.1|CF119369 MTU10CS.P16.H11 Aspen stem cDNA Libr... 95 2e-021
gb|BU894803.1|BU894803 X015C04 Populus wood cDNA library Po... 64 4e-021
gb|CV254856.1|CV254856 WS02411.B21_G05 PTxD-ICC-N-A-14 Popu... 82 4e-021
gb|DT513869.1|DT513869 WS02423.B21_D17 PTxD-ICC-N-A-14 Popu... 82 4e-021
gb|CV267405.1|CV267405 WS02031.B21_K13 PTxN-IB-N-A-11 Popul... 70 6e-021
gb|DT504670.1|DT504670 WS01314.B21_E18 PTxD-IL-FL-A-4 Popul... 87 6e-021
gb|DN488227.1|DN488227 R042F04.3pR Populus root cDNA librar... 91 8e-021
gb|BU891342.1|BU891342 P048H10 Populus petioles cDNA librar... 100 9e-021
>gb|AJ774738.1|AJ774738 AJ774738 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300023G03F1, mRNA sequence
Length = 670
Score = 130 bits (279), Expect(2) = 6e-047
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = +1 / +2
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LPDGF+ V RG +++WAPQQEVLAHPA GG THNGWNSTLESI EGVPM+ +P F
Sbjct: 200 ESLPDGFLEMVGKRGYIVKWAPQQEVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFF 379
Query: 580 GDQXPTXXYVCDVWXI 627
GDQ YV DVW I
Sbjct: 380 GDQRVNARYVSDVWKI 427
Score = 77.4 bits (163), Expect(2) = 6e-047
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +1 / +2
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
SLL+QD+ C+ WLD + P SVLYVSFGS+ V E +EIAWGL +S PF
Sbjct: 2 SLLTQDQSCISWLDTQTPNSVLYVSFGSIAAVNETEFLEIAWGLLHSNQPF 154
>gb|CK091254.1|CK091254 F066P42.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F066P42 3', mRNA sequence
Length = 782
Score = 120 bits (258), Expect(2) = 2e-043
Identities = 46/80 (57%), Positives = 56/80 (70%)
Frame = +1 / -1
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LP+GF+ + GR +++WAPQ EVLAHPAVG THNGWNSTLESI EGVPM+ P F
Sbjct: 506 EPLPNGFLEDLNGRAHIVKWAPQSEVLAHPAVGAFWTHNGWNSTLESICEGVPMICMPCF 327
Query: 580 GDQXPTXXYVCDVWXIXVLL 639
DQ YV DVW + + L
Sbjct: 326 TDQMANARYVSDVWRVGMQL 267
Score = 95.7 bits (203), Expect(2) = 1e-029
Identities = 44/73 (60%), Positives = 49/73 (67%)
Frame = -2 / +1
Query: 623 LHTSHTXXXVGXWSPKMGLDSIGTPS*ILSSVEFHPL*VXXPPTAG*ASTSCCGAHSITL 444
LHTS T + WS K G+ IGTPS ILS+VEFHPL*V PTAG*ASTS CGAH
Sbjct: 283 LHTSLTYLALAIWSVKQGIHIIGTPSQILSNVEFHPL*VQNAPTAG*ASTSDCGAHFTMC 462
Query: 443 PLPSTAAMNPSGS 405
LP ++ NP GS
Sbjct: 463 ALPFKSSRNPLGS 501
Score = 75.1 bits (158), Expect(2) = 2e-043
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = +1 / -1
Query: 193 ADETSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+ +SLL+QD+ + WLD +AP SV+YVSFGSV + E +E+AWGLANS PF
Sbjct: 716 SSSSSLLTQDQSSISWLDKQAPKSVVYVSFGSVAALNETEFLEVAWGLANSKQPF 552
Score = 53.6 bits (111), Expect(2) = 1e-029
Identities = 25/48 (52%), Positives = 30/48 (62%)
Frame = -2 / +1
Query: 344 LFAKPHAISTNSSGVT*TTLPKLTYSTDPGARASSHSMQTRSWLRRLV 201
L AKP A S NS TLPKLTY+TD GA SS ++ SW+ RL+
Sbjct: 565 LLAKPQATSKNSVSFNAATLPKLTYTTDFGACLSSQEIEL*SWVSRLL 708
>gb|DT477027.1|DT477027 WS01231.B21_L09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_L09 3', mRNA sequence
Length = 925
Score = 108 bits (232), Expect(3) = 7e-038
Identities = 44/80 (55%), Positives = 54/80 (67%)
Frame = +1 / -3
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LP+ F V RG +++WAPQ+EVLAH AVGG +H GWNSTLESI EGVPM+ +P F
Sbjct: 551 ESLPEDFREIVGERGCIVKWAPQKEVLAHSAVGGFWSHCGWNSTLESISEGVPMICKPCF 372
Query: 580 GDQXPTXXYVCDVWXIXVLL 639
GDQ Y VW I + L
Sbjct: 371 GDQRVNARYASYVWGIGLQL 312
Score = 59.1 bits (123), Expect(3) = 7e-038
Identities = 22/48 (45%), Positives = 34/48 (70%)
Frame = +1 / -3
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANS 345
+SLL++D C+ WL+ + SVLY+S GS+ + E+ E+AWGLA+S
Sbjct: 752 SSLLNEDTSCITWLEKQPCNSVLYISLGSLASIDETEVAEMAWGLASS 609
Score = 27.6 bits (54), Expect(3) = 7e-038
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1 / -3
Query: 136 IPPFAVGPLHKLTAVSN 186
IP F +GPLHK VS+
Sbjct: 803 IPIFPIGPLHKFAPVSS 753
>gb|CK095578.1|CK095578 UA14CPH12.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA14CPH12 3', mRNA sequence
Length = 574
Score = 125 bits (269), Expect(2) = 5e-036
Identities = 49/80 (61%), Positives = 58/80 (72%)
Frame = +1 / -3
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LPDGF+ V RG +++WAPQQEVLAHPA GG TH+GWNSTLESI EGVPM+ +P
Sbjct: 410 ESLPDGFLEMVGRRGYIVKWAPQQEVLAHPATGGFWTHSGWNSTLESICEGVPMICQPFS 231
Query: 580 GDQXPTXXYVCDVWXIXVLL 639
GDQ YV DVW I + L
Sbjct: 230 GDQRVNARYVSDVWKIGIHL 171
Score = 45.4 bits (93), Expect(2) = 5e-036
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +1 / -1
Query: 238 WLDARAPGSVLYVSFGSVVHVTPDELVEIAWG 333
WLD + P SVLYVSFGS+ V E +E+A G
Sbjct: 574 WLDTQTPNSVLYVSFGSLAAVNETEFLEMAGG 479
>gb|DT516411.1|DT516411 WS02431.B21_E19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02431_E19 3', mRNA sequence
Length = 802
Score = 98.5 bits (209), Expect(2) = 2e-035
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = +1 / -3
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F++A + RG W Q++VL+HP++GG THNGWNST+ESI GVPM+ P
Sbjct: 602 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPMICWP 423
Query: 574 IFGDQXPTXXYVCDVWXI 627
F +Q Y C W I
Sbjct: 422 FFAEQQTNCRYCCTEWGI 369
Score = 70.6 bits (148), Expect(2) = 2e-035
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +1 / -3
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
++L ++ C+EWLD++ P SV+YV+FGS+ +T D+L E AWGLANS F
Sbjct: 791 SNLWIEESGCLEWLDSKEPNSVVYVNFGSITVMTSDQLTEFAWGLANSDQTF 636
>gb|CV257201.1|CV257201 WS0245.B21_P10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0245_P10 3', mRNA sequence
Length = 815
Score = 98.5 bits (209), Expect(2) = 3e-035
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = +1 / -2
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F++A + RG W Q++VL+HP++GG THNGWNST+ESI GVPM+ P
Sbjct: 601 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPMICWP 422
Query: 574 IFGDQXPTXXYVCDVWXI 627
F +Q Y C W I
Sbjct: 421 FFAEQQTNCRYCCTEWGI 368
Score = 70.1 bits (147), Expect(2) = 3e-035
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +1 / -2
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
++L ++ C+EWLD++ P SV+YV+FGS+ +T D+L E AWGLANS F
Sbjct: 790 SNLWIEESGCLEWLDSKDPNSVVYVNFGSITVMTSDQLTEFAWGLANSDQTF 635
>gb|DT512707.1|DT512707 WS02420.B21_A09 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_A09 3', mRNA sequence
Length = 848
Score = 99.8 bits (212), Expect(2) = 8e-035
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = +1 / -1
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP+ F+ ++GRG + W PQ +VLAHP+VG TH GWNS +E+I GVP++ P
Sbjct: 647 DSAILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNSMMETISCGVPVICWP 468
Query: 574 IFGDQXPTXXYVCDVWXIXV 633
F DQ P Y C W I V
Sbjct: 467 FFADQQPNCRYACTKWGIGV 408
Score = 67.4 bits (141), Expect(2) = 8e-035
Identities = 26/52 (50%), Positives = 36/52 (69%)
Frame = +1 / -1
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+SL +D C++WLD R SV+Y+++GSV +T L E AWGLANS +PF
Sbjct: 836 SSLWKEDSNCLDWLDKRGLNSVVYINYGSVTVMTDTHLREFAWGLANSKLPF 681
>gb|CK102642.1|CK102642 G085P75.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G085P75 5', mRNA sequence
Length = 476
Score = 101 bits (216), Expect(2) = 2e-034
Identities = 38/80 (47%), Positives = 49/80 (61%)
Frame = +1 / +3
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP+ F+ ++GRG + W PQ +VLAHP+VG TH GWNS +E+I GVP++ P
Sbjct: 180 DSAILPEEFLEQIDGRGLLASWCPQDQVLAHPSVGVFLTHCGWNSMMETISSGVPVICWP 359
Query: 574 IFGDQXPTXXYVCDVWXIXV 633
F DQ P Y C W I V
Sbjct: 360 FFADQQPNCRYACTKWGIGV 419
Score = 64.2 bits (134), Expect(2) = 2e-034
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +1 / +3
Query: 217 QDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+D C++WLD R SV+Y+++GSV +T L E AWGLANS +PF
Sbjct: 6 EDSNCLDWLDKRGLNSVVYINYGSVTVMTDTHLREFAWGLANSKLPF 146
>gb|DT510522.1|DT510522 WS02426.BR_M15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_M15 5', mRNA sequence
Length = 847
Score = 93.4 bits (198), Expect(2) = 7e-034
Identities = 35/73 (47%), Positives = 46/73 (63%)
Frame = +1 / +3
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F++A + RG W Q++VL+HP++GG THNGWNST+ESI GVPM+ P
Sbjct: 624 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPMICWP 803
Query: 574 IFGDQXPTXXYVC 612
F +Q Y C
Sbjct: 804 FFAEQQTNCRYCC 842
Score = 70.6 bits (148), Expect(2) = 7e-034
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +1 / +3
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
++L ++ C+EWLD++ P SV+YV+FGS+ +T D+L E AWGLANS F
Sbjct: 435 SNLWIEESGCLEWLDSKEPNSVVYVNFGSITVMTSDQLTEFAWGLANSDQTF 590
>gb|CV271864.1|CV271864 WS0155.B21_O06 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0155_O06 3', mRNA sequence
Length = 907
Score = 143 bits (307), Expect = 1e-033
Identities = 65/133 (48%), Positives = 75/133 (56%)
Frame = +1 / +1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPFXXXXXXXXXXXXDKQEL 408
C +WLD + GSVLYVSFGS HV +LVEIA GL+ S V F D L
Sbjct: 400 CTQWLDKKPHGSVLYVSFGSFAHVAKRDLVEIAKGLSLSKVSFVWVLRSDIVSSDDADPL 579
Query: 409 PDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGDQ 588
P GF V R +I W Q+ VLAHPA+GG TH GWNS LESI+ VP+LS P+ DQ
Sbjct: 580 PGGFEEEVADRAMIIPWCSQRAVLAHPAIGGFLTHCGWNSVLESIWCQVPLLSLPLQTDQ 759
Query: 589 XPTXXYVCDVWXI 627
V D W I
Sbjct: 760 FTNRKLVVDDWKI 798
>gb|DN500518.1|DN500518 UL60PB12.5pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL60PB12 5',
mRNA sequence
Length = 733
Score = 100 bits (213), Expect(2) = 2e-033
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +1 / +1
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F + RG + W PQ+EVL HP++GG TH+GWNS ESI GVPML P
Sbjct: 286 DSAILPPEFTDETKDRGFISNWCPQEEVLNHPSIGGFLTHSGWNSIAESISSGVPMLCLP 465
Query: 574 IFGDQXPTXXYVCDVWXI 627
FGDQ Y C+ W I
Sbjct: 466 FFGDQQTNCRYTCNEWGI 519
Score = 62.3 bits (130), Expect(2) = 2e-033
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1 / +1
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+L ++ C++WLD++ P SVLYV+FGSV T +L+E+ GLA S PF
Sbjct: 100 NLWKEEVECLQWLDSKKPNSVLYVNFGSVAVATKQQLIELGMGLAKSVHPF 252
>gb|CX178075.1|CX178075 G12_45-100_14.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 653
Score = 94.4 bits (200), Expect(2) = 2e-033
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F++ + R ++ W PQ++VL HP++GG +H GWNSTLESI GVPM+ P FG+
Sbjct: 214 LPPEFLSETKDRSLLVSWCPQEQVLKHPSIGGFLSHMGWNSTLESICGGVPMVCWPFFGE 393
Query: 586 QXPTXXYVCDVWXI 627
Q + C W I
Sbjct: 394 QQTNCWFACTKWGI 435
Score = 68.3 bits (143), Expect(2) = 2e-033
Identities = 23/42 (54%), Positives = 33/42 (78%)
Frame = +1 / +1
Query: 232 MEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+EWLD++ P SV+YV+FGS+ +T +++E AWGLANS PF
Sbjct: 43 IEWLDSKGPNSVVYVNFGSITVITAQQMIEFAWGLANSNKPF 168
>gb|CV229269.1|CV229269 WS01912.B21_M05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01912_M05 3', mRNA sequence
Length = 759
Score = 93.4 bits (198), Expect(2) = 5e-033
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F E RG + W PQ+EVL HPAVGG TH+GW ST+ES+ G+P+ P F D
Sbjct: 574 LPAEFAEETEKRGFITSWCPQEEVLNHPAVGGFLTHSGWGSTIESLCAGLPLACWPFFAD 395
Query: 586 QXPTXXYVCDVWXI 627
Q Y C+ W +
Sbjct: 394 QAMNCRYSCNEWGV 353
Score = 67.8 bits (142), Expect(2) = 5e-033
Identities = 24/46 (52%), Positives = 34/46 (73%)
Frame = +1 / -3
Query: 220 DRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
D C++WL+ + P SV+YV+FGS+ +T D+LVE A GL NS +PF
Sbjct: 757 DHECLQWLETKEPKSVVYVNFGSITVMTADQLVEFAMGLVNSNIPF 620
>gb|CX178016.1|CX178016 G09_45-81_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 665
Score = 93.9 bits (199), Expect(2) = 7e-033
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F + RG V W PQ+EVL HP+VGG TH GWNS +ES+ GVP++ P+F D
Sbjct: 291 LPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWPLFAD 112
Query: 586 QXPTXXYVCDVWXI 627
Q Y C W +
Sbjct: 111 QPINCSYACIEWGV 70
Score = 66.9 bits (140), Expect(2) = 7e-033
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1 / -3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+L +D C++WLD + P SV+YV+FGS+ +T ++LVE A GLANS + F
Sbjct: 489 NLWKEDSECLQWLDTKEPKSVVYVNFGSIAVMTAEQLVEFAMGLANSEISF 337
>gb|CX183741.1|CX183741 A09_45-83_01.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 666
Score = 93.9 bits (199), Expect(2) = 7e-033
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F + RG V W PQ+EVL HP+VGG TH GWNS +ES+ GVP++ P+F D
Sbjct: 292 LPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWPLFAD 113
Query: 586 QXPTXXYVCDVWXI 627
Q Y C W +
Sbjct: 112 QPINCSYACIEWGV 71
Score = 66.9 bits (140), Expect(2) = 7e-033
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1 / -3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+L +D C++WLD + P SV+YV+FGS+ +T ++LVE A GLANS + F
Sbjct: 490 NLWKEDSECLQWLDTKEPKSVVYVNFGSIAVMTAEQLVEFAMGLANSEISF 338
>gb|CX180397.1|CX180397 C08_45-107_06.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 650
Score = 93.9 bits (199), Expect(2) = 7e-033
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F + RG V W PQ+EVL HP+VGG TH GWNS +ES+ GVP++ P+F D
Sbjct: 273 LPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWPLFAD 94
Query: 586 QXPTXXYVCDVWXI 627
Q Y C W +
Sbjct: 93 QPINCSYACIEWGV 52
Score = 66.9 bits (140), Expect(2) = 7e-033
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1 / -3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+L +D C++WLD + P SV+YV+FGS+ +T ++LVE A GLANS + F
Sbjct: 471 NLWKEDSECLQWLDTKEPKSVVYVNFGSIAVMTAEQLVEFAMGLANSEISF 319
>gb|CX180523.1|CX180523 A03_45-107_01.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 647
Score = 93.9 bits (199), Expect(2) = 7e-033
Identities = 35/74 (47%), Positives = 44/74 (59%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F + RG V W PQ+EVL HP+VGG TH GWNS +ES+ GVP++ P+F D
Sbjct: 273 LPAEFQVETQNRGFVTSWCPQEEVLNHPSVGGFLTHTGWNSIIESLCAGVPVICWPLFAD 94
Query: 586 QXPTXXYVCDVWXI 627
Q Y C W +
Sbjct: 93 QPINCSYACIEWGV 52
Score = 66.9 bits (140), Expect(2) = 7e-033
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +1 / -3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+L +D C++WLD + P SV+YV+FGS+ +T ++LVE A GLANS + F
Sbjct: 471 NLWKEDSECLQWLDTKEPKSVVYVNFGSIAVMTAEQLVEFAMGLANSEISF 319
>gb|CV240642.1|CV240642 WS0251.B21_P03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0251_P03 3', mRNA sequence
Length = 845
Score = 95.7 bits (203), Expect(2) = 2e-032
Identities = 39/78 (50%), Positives = 45/78 (57%)
Frame = +1 / -2
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F + R + W PQ+EVL HP+VGG TH GW ST+ESI GVPML P
Sbjct: 658 DSAILPPEFTEETKDRCFISSWCPQEEVLDHPSVGGFLTHCGWGSTIESISSGVPMLCWP 479
Query: 574 IFGDQXPTXXYVCDVWXI 627
FGDQ Y C+ W I
Sbjct: 478 SFGDQQTNCRYACNEWAI 425
Score = 63.3 bits (132), Expect(2) = 2e-032
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1 / -2
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+L ++ C++WLD++ P SV+YV+FGSV T +L+E GLA SG PF
Sbjct: 844 NLWKEEVECLQWLDSQKPNSVVYVNFGSVAVATKQQLIEFGTGLAKSGHPF 692
>gb|CV280804.1|CV280804 WS0137.B21_M10 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_M10 3', mRNA sequence
Length = 887
Score = 100 bits (213), Expect(2) = 3e-032
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +1 / -1
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D P FM + RG + W PQ+EVL+HP++GG TH GW ST+ESI GVPML P
Sbjct: 653 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 474
Query: 574 IFGDQXPTXXYVCDVWXI 627
FGDQ Y C W I
Sbjct: 473 SFGDQQTNCRYTCTEWGI 420
Score = 58.2 bits (121), Expect(2) = 3e-032
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1 / -1
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
+L ++ C++WLD++ P SV+YV+FGS+ ++ + +E GLA SG
Sbjct: 839 NLWKEESECLQWLDSKEPNSVIYVNFGSIAVISKQQFIEFGMGLAKSG 696
>gb|CV277009.1|CV277009 WS0142.B21_G13 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_G13 3', mRNA sequence
Length = 883
Score = 100 bits (213), Expect(2) = 3e-032
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +1 / -3
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D P FM + RG + W PQ+EVL+HP++GG TH GW ST+ESI GVPML P
Sbjct: 635 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 456
Query: 574 IFGDQXPTXXYVCDVWXI 627
FGDQ Y C W I
Sbjct: 455 SFGDQQTNCRYTCTEWGI 402
Score = 58.2 bits (121), Expect(2) = 3e-032
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1 / -3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
+L ++ C++WLD++ P SV+YV+FGS+ ++ + +E GLA SG
Sbjct: 821 NLWKEESECLQWLDSKEPNSVIYVNFGSIAVISKQQFIEFGMGLAKSG 678
>gb|CV280613.1|CV280613 WS0137.B21_A16 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0137_A16 3', mRNA sequence
Length = 879
Score = 100 bits (213), Expect(2) = 3e-032
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +1 / -2
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D P FM + RG + W PQ+EVL+HP++GG TH GW ST+ESI GVPML P
Sbjct: 653 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 474
Query: 574 IFGDQXPTXXYVCDVWXI 627
FGDQ Y C W I
Sbjct: 473 SFGDQQTNCRYTCTEWGI 420
Score = 58.2 bits (121), Expect(2) = 3e-032
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1 / -2
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
+L ++ C++WLD++ P SV+YV+FGS+ ++ + +E GLA SG
Sbjct: 839 NLWKEESECLQWLDSKEPNSVIYVNFGSIAVISKQQFIEFGMGLAKSG 696
>gb|DT504436.1|DT504436 WS01313.B21_F21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS01313_F21 3', mRNA sequence
Length = 844
Score = 100 bits (213), Expect(2) = 3e-032
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +1 / -3
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D P FM + RG + W PQ+EVL+HP++GG TH GW ST+ESI GVPML P
Sbjct: 653 DSPIFPPEFMKETKERGFIASWCPQEEVLSHPSIGGFITHCGWGSTIESISSGVPMLCWP 474
Query: 574 IFGDQXPTXXYVCDVWXI 627
FGDQ Y C W I
Sbjct: 473 SFGDQQTNCRYTCTEWGI 420
Score = 58.2 bits (121), Expect(2) = 3e-032
Identities = 19/48 (39%), Positives = 33/48 (68%)
Frame = +1 / -3
Query: 205 SLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSG 348
+L ++ C++WLD++ P SV+YV+FGS+ ++ + +E GLA SG
Sbjct: 839 NLWKEESECLQWLDSKEPNSVIYVNFGSIAVISKQQFIEFGMGLAKSG 696
>gb|BP934618.1|BP934618 BP934618 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-067_H11.r 3', mRNA sequence
Length = 656
Score = 112 bits (239), Expect(2) = 6e-032
Identities = 45/80 (56%), Positives = 55/80 (68%)
Frame = +1 / -3
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LP+GF V RG +++WAPQ+EVLAH AVGG +H GWNSTLESI EGVPM+ +P F
Sbjct: 486 ESLPEGFREIVGERGCIVKWAPQKEVLAHAAVGGFWSHCGWNSTLESISEGVPMICKPCF 307
Query: 580 GDQXPTXXYVCDVWXIXVLL 639
GDQ Y VW I + L
Sbjct: 306 GDQRVNARYASYVWGIGLQL 247
Score = 45.4 bits (93), Expect(2) = 6e-032
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +1 / -3
Query: 238 WLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANS 345
WLD + SVLY+S GS+ + E+ E+AW LANS
Sbjct: 651 WLDKQPCNSVLYISLGSLASIDETEVPEMAWVLANS 544
>gb|DV465400.1|DV465400 MTUNUL1.P39.B04 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 903
Score = 95.7 bits (203), Expect(2) = 2e-031
Identities = 34/76 (44%), Positives = 53/76 (69%)
Frame = +1 / +2
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LPDGF+ RGKV++W+PQ++VLAHP+V TH GWNS++E++ G+P+++ P +GD
Sbjct: 488 LPDGFLEKAGDRGKVVQWSPQEKVLAHPSVACFVTHCGWNSSMEALTSGMPVVAFPQWGD 667
Query: 586 QXPTXXYVCDVWXIXV 633
Q Y+ D+ + V
Sbjct: 668 QVTNAKYLVDILKVGV 715
Score = 60.5 bits (126), Expect(2) = 2e-031
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1 / +2
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+EWLD + P SV+YVSFGSVV + D+ EI GL NS V F
Sbjct: 308 CIEWLDTKPPSSVVYVSFGSVVQLKQDQWNEITHGLLNSVVSF 436
>gb|DT513643.1|DT513643 WS02422.B21_J17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02422_J17 3', mRNA sequence
Length = 777
Score = 92.5 bits (196), Expect(2) = 2e-030
Identities = 37/74 (50%), Positives = 42/74 (56%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F + RG + W PQ+EVL HP+VGG TH GW S +ESI GVPML P GD
Sbjct: 544 LPPEFTEETKDRGFICSWCPQEEVLNHPSVGGFLTHCGWTSIIESISSGVPMLCWPFAGD 365
Query: 586 QXPTXXYVCDVWXI 627
Q Y C W I
Sbjct: 364 QQTNCRYTCTEWGI 323
Score = 60.1 bits (125), Expect(2) = 2e-030
Identities = 23/52 (44%), Positives = 35/52 (67%)
Frame = +1 / -3
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
++L ++ C++WLD++ SV+YV+FGSV T +L+E GLA SG PF
Sbjct: 745 SNLWKEEVQCVQWLDSQKSNSVVYVNFGSVAVATKQQLIEFGMGLAKSGHPF 590
>gb|DT489381.1|DT489381 WS02542.B21_B04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02542_B04 3', mRNA sequence
Length = 937
Score = 98.5 bits (209), Expect(2) = 4e-030
Identities = 41/77 (53%), Positives = 47/77 (61%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K LP+GF+ +G ++ W PQ EVLAH AVG TH GWNS LESI GVPM+ RP
Sbjct: 503 KVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPF 324
Query: 577 FGDQXPTXXYVCDVWXI 627
FGDQ V D W I
Sbjct: 323 FGDQRLNGRMVEDAWKI 273
Score = 53.2 bits (110), Expect(2) = 4e-030
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+ WLD + SV Y+SFGS+ P ELV +A L SGVPF
Sbjct: 656 CITWLDRQKLASVAYLSFGSITTPPPHELVALAEALETSGVPF 528
>gb|CV244301.1|CV244301 WS0254.B21_E14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_E14 3', mRNA sequence
Length = 862
Score = 98.5 bits (209), Expect(2) = 4e-030
Identities = 41/77 (53%), Positives = 47/77 (61%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K LP+GF+ +G ++ W PQ EVLAH AVG TH GWNS LESI GVPM+ RP
Sbjct: 503 KVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPF 324
Query: 577 FGDQXPTXXYVCDVWXI 627
FGDQ V D W I
Sbjct: 323 FGDQRLNGRMVEDAWKI 273
Score = 53.2 bits (110), Expect(2) = 4e-030
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+ WLD + SV Y+SFGS+ P ELV +A L SGVPF
Sbjct: 656 CITWLDRQKLASVAYLSFGSITTPPPHELVALAEALETSGVPF 528
>gb|DT492065.1|DT492065 WS02549.C21_J03 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02549_J03 3', mRNA sequence
Length = 844
Score = 98.5 bits (209), Expect(2) = 4e-030
Identities = 41/77 (53%), Positives = 47/77 (61%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K LP+GF+ +G ++ W PQ EVLAH AVG TH GWNS LESI GVPM+ RP
Sbjct: 503 KVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPF 324
Query: 577 FGDQXPTXXYVCDVWXI 627
FGDQ V D W I
Sbjct: 323 FGDQRLNGRMVEDAWKI 273
Score = 53.2 bits (110), Expect(2) = 4e-030
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+ WLD + SV Y+SFGS+ P ELV +A L SGVPF
Sbjct: 656 CITWLDRQKLASVAYLSFGSITTPPPHELVALAEALETSGVPF 528
>gb|CV245380.1|CV245380 WS0257.B21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_E04 3', mRNA sequence
Length = 835
Score = 98.5 bits (209), Expect(2) = 4e-030
Identities = 41/77 (53%), Positives = 47/77 (61%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K LP+GF+ +G ++ W PQ EVLAH AVG TH GWNS LESI GVPM+ RP
Sbjct: 503 KVHLPNGFLDRTTSQGLLVPWTPQMEVLAHKAVGVFITHCGWNSLLESIAGGVPMICRPF 324
Query: 577 FGDQXPTXXYVCDVWXI 627
FGDQ V D W I
Sbjct: 323 FGDQRLNGRMVEDAWKI 273
Score = 53.2 bits (110), Expect(2) = 4e-030
Identities = 22/43 (51%), Positives = 27/43 (62%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+ WLD + SV Y+SFGS+ P ELV +A L SGVPF
Sbjct: 656 CITWLDRQKLASVAYLSFGSITTPPPHELVALAEALETSGVPF 528
>gb|CV235889.1|CV235889 WS01221.B21_P24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01221_P24 3', mRNA sequence
Length = 415
Score = 93.9 bits (199), Expect(2) = 4e-030
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -1
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 232 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 53
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 52 FGDQTVNTRTIEAVW 8
Score = 57.8 bits (120), Expect(2) = 4e-030
Identities = 22/49 (44%), Positives = 31/49 (63%)
Frame = +1 / -1
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S VC+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 403 MSDPHVCLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 257
>gb|AJ772854.1|AJ772854 AJ772854 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000200001D04F1, mRNA sequence
Length = 671
Score = 82.5 bits (174), Expect(2) = 5e-030
Identities = 31/78 (39%), Positives = 41/78 (52%)
Frame = +1 / +3
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F RG W Q++VL H ++GG +H GWNST+ES+ GVPML P
Sbjct: 318 DSAVLPPEFREETRERGLTASWCAQEKVLKHSSIGGFLSHMGWNSTIESLSNGVPMLCWP 497
Query: 574 IFGDQXPTXXYVCDVWXI 627
F +Q + C W +
Sbjct: 498 FFSEQQTNCKFACTDWDV 551
Score = 68.7 bits (144), Expect(2) = 5e-030
Identities = 24/48 (50%), Positives = 36/48 (75%)
Frame = +1 / +3
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANS 345
+SL ++ C+ WLD++ P SV+YV+FGS+ + P +LVE +WGLANS
Sbjct: 129 SSLWKEETECLHWLDSKDPNSVVYVNFGSITVMNPQQLVEFSWGLANS 272
>gb|BP931106.1|BP931106 BP931106 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-018_K10.r 3', mRNA sequence
Length = 608
Score = 130 bits (279), Expect = 1e-029
Identities = 50/80 (62%), Positives = 59/80 (73%)
Frame = +1 / -3
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LPDGF+ V RG +++WAPQQ+VLAHPA GG THNGWNSTLESI EGVPM+ +P F
Sbjct: 573 ESLPDGFLEMVGKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFF 394
Query: 580 GDQXPTXXYVCDVWXIXVLL 639
GDQ YV DVW I + L
Sbjct: 393 GDQRVNARYVSDVWKIGIHL 334
>gb|BP935319.1|BP935319 BP935319 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-076_B15.r 3', mRNA sequence
Length = 640
Score = 130 bits (279), Expect = 1e-029
Identities = 50/80 (62%), Positives = 59/80 (73%)
Frame = +1 / -3
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LPDGF+ V RG +++WAPQQ+VLAHPA GG THNGWNSTLESI EGVPM+ +P F
Sbjct: 578 ESLPDGFLEMVGKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFF 399
Query: 580 GDQXPTXXYVCDVWXIXVLL 639
GDQ YV DVW I + L
Sbjct: 398 GDQRVNARYVSDVWKIGIHL 339
>gb|CN520132.1|CN520132 GQ0106.B3_K07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0106_K07 5', mRNA sequence
Length = 817
Score = 93.9 bits (199), Expect(2) = 2e-029
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / +3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 306 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 485
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 486 FGDQTVNTRTIEAVW 530
Score = 55.0 bits (114), Expect(2) = 2e-029
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1 / +3
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 135 MSDPHGCLEWLDKQKQESVVYISFGSVISLPPQELAELVEALKECKLPF 281
>gb|CV234524.1|CV234524 WS01215.B21.1_D13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_D13 3', mRNA sequence
Length = 728
Score = 94.4 bits (200), Expect(2) = 2e-029
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -2
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 232 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMIGRPF 53
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 52 FGDQTVNTKKIEAVW 8
Score = 54.6 bits (113), Expect(2) = 2e-029
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1 / -2
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 403 MSDPHGCLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 257
>gb|BP932015.1|BP932015 BP932015 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-030_L18.r 3', mRNA sequence
Length = 574
Score = 129 bits (276), Expect = 3e-029
Identities = 49/80 (61%), Positives = 59/80 (73%)
Frame = +1 / -2
Query: 400 QELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIF 579
+ LPDGF+ + RG +++WAPQQ+VLAHPA GG THNGWNSTLESI EGVPM+ +P F
Sbjct: 570 ESLPDGFLEMLVKRGYIVKWAPQQQVLAHPATGGFWTHNGWNSTLESICEGVPMICQPFF 391
Query: 580 GDQXPTXXYVCDVWXIXVLL 639
GDQ YV DVW I + L
Sbjct: 390 GDQRVNARYVSDVWKIGIHL 331
>gb|DT476162.1|DT476162 WS01228.B21_I22 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_I22 3', mRNA sequence
Length = 962
Score = 93.9 bits (199), Expect(2) = 3e-029
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -2
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 232 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 53
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 52 FGDQTVNTRTIEAVW 8
Score = 54.6 bits (113), Expect(2) = 3e-029
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1 / -2
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 403 MSDPHGCLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 257
>gb|CV236193.1|CV236193 WS01223.B21_D08 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_D08 3', mRNA sequence
Length = 883
Score = 93.9 bits (199), Expect(2) = 3e-029
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -1
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 232 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 53
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 52 FGDQTVNTRTIEAVW 8
Score = 54.6 bits (113), Expect(2) = 3e-029
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1 / -1
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 403 MSDPHGCLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 257
>gb|CV233333.1|CV233333 WS0121.B21_P12 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0121_P12 3', mRNA sequence
Length = 601
Score = 93.9 bits (199), Expect(2) = 3e-029
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -1
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 232 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 53
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 52 FGDQTVNTRTIEAVW 8
Score = 54.6 bits (113), Expect(2) = 3e-029
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1 / -1
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 403 MSDPHGCLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 257
>gb|CV233345.1|CV233345 WS01210.B21_A08 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01210_A08 3', mRNA sequence
Length = 564
Score = 93.9 bits (199), Expect(2) = 3e-029
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 232 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 53
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 52 FGDQTVNTRTIEAVW 8
Score = 54.6 bits (113), Expect(2) = 3e-029
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1 / -3
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 403 MSDPHGCLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 257
>gb|CV236341.1|CV236341 WS01223.B21_M04 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_M04 3', mRNA sequence
Length = 838
Score = 93.9 bits (199), Expect(2) = 6e-029
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -1
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 682 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 503
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 502 FGDQTVNTRTIEAVW 458
Score = 53.6 bits (111), Expect(2) = 6e-029
Identities = 20/43 (46%), Positives = 28/43 (65%)
Frame = +1 / -1
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 835 CLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 707
>gb|CK091588.1|CK091588 F109P71.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F109P71 3', mRNA sequence
Length = 619
Score = 90.7 bits (192), Expect(2) = 3e-028
Identities = 34/64 (53%), Positives = 45/64 (70%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 233 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 54
Query: 577 FGDQ 588
FGDQ
Sbjct: 53 FGDQ 42
Score = 54.6 bits (113), Expect(2) = 3e-028
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +1 / -3
Query: 211 LSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+S C+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 404 MSDPHGCLEWLDKQKQESVVYISFGSVITLPPQELAELVEALKECKLPF 258
>gb|DN490532.1|DN490532 UL60PB12.3pR Populus cold stressed leaves cDNA library Populus
tremula x Populus tremuloides cDNA clone UL60PB12 3',
mRNA sequence
Length = 612
Score = 100 bits (213), Expect(2) = 3e-028
Identities = 39/78 (50%), Positives = 46/78 (58%)
Frame = +1 / -3
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F + RG + W PQ+EVL HP++GG TH+GWNS ESI GVPML P
Sbjct: 466 DSAILPPEFTDETKDRGFISNWCPQEEVLNHPSIGGFLTHSGWNSIAESISSGVPMLCLP 287
Query: 574 IFGDQXPTXXYVCDVWXI 627
FGDQ Y C+ W I
Sbjct: 286 FFGDQQTNCRYTCNEWGI 233
Score = 45.0 bits (92), Expect(2) = 3e-028
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1 / -3
Query: 247 ARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
++ P SVLYV+FGSV T L+E+ GLA S PF
Sbjct: 610 SKKPNSVLYVNFGSVAVATKQHLIELGMGLAKSVHPF 500
>gb|DN489285.1|DN489285 T020F04.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T020F04 3', mRNA sequence
Length = 657
Score = 82.0 bits (173), Expect(2) = 4e-028
Identities = 30/74 (40%), Positives = 42/74 (56%)
Frame = +1 / -3
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ RG + W Q++VL H ++GG +H GWNST+ES+ GVPML P F +
Sbjct: 463 LPPEFLEETRERGLMASWCAQEKVLKHSSIGGFLSHMGWNSTIESLSNGVPMLCWPFFSE 284
Query: 586 QXPTXXYVCDVWXI 627
Q + C W +
Sbjct: 283 QQTNCKFACVDWGV 242
Score = 62.8 bits (131), Expect(2) = 4e-028
Identities = 21/43 (48%), Positives = 32/43 (74%)
Frame = +1 / -3
Query: 217 QDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANS 345
++ C+ WLD++ P SV+YV+FGS+ + P +L E +WGLANS
Sbjct: 649 EETECLHWLDSKDPNSVVYVNFGSITVMNPQQLEEFSWGLANS 521
>gb|CV282585.1|CV282585 WS0185.B21_A14 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0185_A14 3', mRNA sequence
Length = 848
Score = 93.9 bits (199), Expect(2) = 7e-028
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +1 / -1
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
K+ELP+ F+ + +GKV+ W PQ +VL H A+G TH+GWNS L+SI VPM+ RP
Sbjct: 689 KEELPEEFLERTKEKGKVVSWTPQLKVLRHKAIGVFVTHSGWNSVLDSIAGCVPMICRPF 510
Query: 577 FGDQXPTXXYVCDVW 621
FGDQ + VW
Sbjct: 509 FGDQTVNTRTIEAVW 465
Score = 50.0 bits (103), Expect(2) = 7e-028
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1 / -1
Query: 232 MEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+EWLD + SV+Y+SFGSV+ + P EL E+ L +PF
Sbjct: 839 LEWLDKQKQESVVYISFGSVISLPPQELAELVEALKECKLPF 714
>gb|DT483477.1|DT483477 WS02522.B21_L06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_L06 3', mRNA sequence
Length = 897
Score = 82.9 bits (175), Expect(2) = 1e-027
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
+++LP GF+ +V G V+ W Q EVLAH A+G TH GWNSTLE + GVPM+
Sbjct: 529 EKKLPTGFLNSVGETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTE 350
Query: 577 FGDQXPTXXYVCDVWXIXV 633
DQ +V DVW + V
Sbjct: 349 RSDQPMNAKFVEDVWKVGV 293
Score = 60.5 bits (126), Expect(2) = 1e-027
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD + P SV+YVSFGS+ +++ +++ EIAWGL S PF
Sbjct: 679 CFTWLDTKPPRSVIYVSFGSMGNISAEQVEEIAWGLKASNRPF 551
>gb|DN485267.1|DN485267 M123B10.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M123B10 3', mRNA sequence
Length = 785
Score = 82.9 bits (175), Expect(2) = 1e-027
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +1 / -3
Query: 397 KQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPI 576
+++LP GF+ +V G V+ W Q EVLAH A+G TH GWNSTLE + GVPM+
Sbjct: 495 EKKLPTGFLNSVGETGMVVSWCNQLEVLAHQAIGCFVTHCGWNSTLEGLGLGVPMVCVTE 316
Query: 577 FGDQXPTXXYVCDVWXIXV 633
DQ +V DVW + V
Sbjct: 315 RSDQPMNAKFVEDVWKVGV 259
Score = 60.5 bits (126), Expect(2) = 1e-027
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +1 / -3
Query: 229 CMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
C WLD + P SV+YVSFGS+ +++ +++ EIAWGL S PF
Sbjct: 645 CFTWLDTKPPRSVIYVSFGSMGNISAEQVEEIAWGLKASNRPF 517
>gb|CV255664.1|CV255664 WS02414.B21_K19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02414_K19 3', mRNA sequence
Length = 723
Score = 98.5 bits (209), Expect(2) = 1e-027
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = +1 / -1
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
D LP F++A + RG W Q++VL+HP++GG THNGWNST+ESI GVPM+ P
Sbjct: 603 DSAMLPPEFVSATKERGLFASWCSQEQVLSHPSIGGFLTHNGWNSTIESICGGVPMICWP 424
Query: 574 IFGDQXPTXXYVCDVWXI 627
F +Q Y C W I
Sbjct: 423 FFAEQQTNCRYCCTEWGI 370
Score = 44.5 bits (91), Expect(2) = 1e-027
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = +1 / -1
Query: 271 YVSFGSVVHVTPDELVEIAWGLANSGVPF 357
YV+FGS+ +T D+L E AWGLANS F
Sbjct: 723 YVNFGSITVMTSDQLTEFAWGLANSDQTF 637
>gb|BI122417.1|BI122417 I006P43P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 502
Score = 75.6 bits (159), Expect(2) = 2e-027
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +1 / +1
Query: 406 LPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRPIFGD 585
LP F+ RG + W Q++VL H ++GG +H GWNST+ES+ GVPML P F +
Sbjct: 298 LPPEFLEETRERGLMASWCAQEKVLKHSSIGGFLSHMGWNSTIESLSNGVPMLCWPFFSE 477
Query: 586 Q 588
Q
Sbjct: 478 Q 480
Score = 66.9 bits (140), Expect(2) = 2e-027
Identities = 23/48 (47%), Positives = 36/48 (75%)
Frame = +1 / +1
Query: 202 TSLLSQDRVCMEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANS 345
+SL ++ C++WLD++ P SV+YV+FGS+ + P +L E +WGLANS
Sbjct: 97 SSLWKEETECLQWLDSKDPNSVVYVNFGSITVMNPQQLEEFSWGLANS 240
>gb|DT483393.1|DT483393 WS02522.B21_H12 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02522_H12 3', mRNA sequence
Length = 887
Score = 93.0 bits (197), Expect(2) = 1e-026
Identities = 36/80 (45%), Positives = 53/80 (66%)
Frame = +1 / -1
Query: 394 DKQELPDGFMAAVEGRGKVIEWAPQQEVLAHPAVGGXXTHNGWNSTLESIYEGVPMLSRP 573
+K ++P+GF+ VE +G V+ W+PQ +VLA+ AVG TH GWNST+E++ GVPM++ P
Sbjct: 590 EKGKIPEGFVEEVENKGLVVNWSPQVKVLANEAVGCFFTHCGWNSTIEALSLGVPMVTMP 411
Query: 574 IFGDQXPTXXYVCDVWXIXV 633
+ DQ V D W + V
Sbjct: 410 GWSDQQTNSKLVEDAWKVGV 351
Score = 46.8 bits (96), Expect(2) = 1e-026
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1 / -1
Query: 232 MEWLDARAPGSVLYVSFGSVVHVTPDELVEIAWGLANSGVPF 357
+ WL ++ SV+YVSFGS ++ ++ EIAWGL S F
Sbjct: 737 INWLSSKPTASVVYVSFGSCATLSSKQMKEIAWGLKRSNFHF 612
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.317 0.136 0.413
Matrix: BLOSUM62
Number of Hits to DB: 267,756,687
Number of Sequences: 369679
Number of extensions: 3105244
Number of successful extensions: 35097
Number of sequences better than 1.0e-020: 104
length of database: 67,802,888
effective HSP length: 50
effective length of database: 49,318,938
effective search space used: 9370598220
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.6 bits)