TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QBJ7h03.xg.2.1
(487 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV254823.1|CV254823 WS02411.B21_E17 PTxD-ICC-N-A-14 Popu... 120 5e-041
gb|CV226522.1|CV226522 WS0164.B21_I06 PT-DX-A-7 Populus tri... 120 5e-041
gb|CV281115.1|CV281115 WS0181.B21_A24 PTxD-IL-N-A-9 Populus... 117 2e-039
gb|DT492725.1|DT492725 WS02552.C21_C02 PT-MB-N-A-15 Populus... 117 2e-039
gb|CX175356.1|CX175356 E12_69-113_10.ab1 leaf inoculated wi... 117 2e-039
gb|CX170255.1|CX170255 A05_69-67_01.ab1 leaf inoculated wit... 117 2e-039
gb|DT499690.1|DT499690 WS9991.BR_B03 PT-P-FL-A-2 Populus tr... 120 7e-038
gb|CA824881.1|CA824881 R49G12 two-month-old roots from clon... 110 3e-037
gb|CX183497.1|CX183497 G02_45-45_14.ab1 leaf inoculated wit... 120 1e-036
gb|DT516153.1|DT516153 WS02430.B21_I23 PTxD-ICC-N-A-14 Popu... 120 3e-033
gb|AI163170.1|AI163170 A034p39u Hybrid aspen plasmid librar... 120 4e-033
gb|DT499621.1|DT499621 WS0118.BR_N06 PT-P-FL-A-2 Populus tr... 104 3e-032
gb|CV245577.1|CV245577 WS0257.B21_M23 PT-MB-N-A-15 Populus ... 100 4e-032
gb|DT496208.1|DT496208 WS01122.BR_L21 PT-P-FL-A-2 Populus t... 104 4e-032
gb|CV227011.1|CV227011 WS0165.B21_O23 PT-DX-A-7 Populus tri... 100 4e-032
gb|DT498959.1|DT498959 WS0116.BR_N13 PT-P-FL-A-2 Populus tr... 104 4e-032
gb|BI128433.1|BI128433 G075P84Y Populus cambium cDNA librar... 91 1e-031
gb|DT509779.1|DT509779 WS02424.BR_L04 PTxD-ICC-N-A-14 Popul... 96 5e-031
gb|CV275792.1|CV275792 WS0177.B21_K03 PTxD-NR-A-8 Populus t... 99 1e-030
gb|CF230497.1|CF230497 PtaC0009B11B1103 Poplar cDNA library... 99 1e-030
gb|CF234885.1|CF234885 PtaJXT0016C7C0705 Poplar cDNA librar... 99 1e-030
gb|CF236473.1|CF236473 PtaJXT3C2C0206 Poplar cDNA library f... 99 1e-030
gb|CF237157.1|CF237157 Ptajxtjxt2G2G0214 Poplar cDNA librar... 99 1e-030
gb|CF227807.1|CF227807 PtaXM0004H3H0315 Poplar cDNA library... 99 1e-030
gb|BU895202.1|BU895202 X020F05 Populus wood cDNA library Po... 96 6e-030
gb|BI129316.1|BI129316 G089P01Y Populus cambium cDNA librar... 96 8e-030
gb|BU895327.1|BU895327 X022E11 Populus wood cDNA library Po... 96 8e-030
gb|CF235176.1|CF235176 PtaJXT0019G11G1113 Poplar cDNA libra... 96 1e-029
gb|CF228514.1|CF228514 PtaXM0013H9H0915 Poplar cDNA library... 96 1e-029
gb|BU896291.1|BU896291 X038E03 Populus wood cDNA library Po... 96 1e-029
gb|CF236101.1|CF236101 PtaJXT0030F3F0311 Poplar cDNA librar... 96 1e-029
gb|BU898117.1|BU898117 X075A09 Populus wood cDNA library Po... 96 1e-029
gb|BI130965.1|BI130965 G113P33Y Populus cambium cDNA librar... 120 1e-029
gb|DT496684.1|DT496684 WS01124.BR_C10 PT-P-FL-A-2 Populus t... 95 2e-029
gb|DT495708.1|DT495708 WS01121.BR_E05 PT-P-FL-A-2 Populus t... 95 2e-029
gb|DT497463.1|DT497463 WS01126.BR_I20 PT-P-FL-A-2 Populus t... 95 2e-029
gb|CV225965.1|CV225965 WS0162.B21_O08 PT-DX-A-7 Populus tri... 95 2e-029
gb|CF228458.1|CF228458 PtaXM0013C1C0105 Poplar cDNA library... 96 2e-029
gb|CF234834.1|CF234834 PtaJXT0015F8F0812 Poplar cDNA librar... 96 2e-029
gb|DT471943.1|DT471943 WS0122.BR_J06 PT-GT-FL-A-3 Populus t... 95 2e-029
gb|CF228743.1|CF228743 PtaXM0016H2H0216 Poplar cDNA library... 96 2e-029
gb|CF236106.1|CF236106 PtaJXT0030F8F0812 Poplar cDNA librar... 96 2e-029
gb|DT470104.1|DT470104 WS01919.C21_O05 PT-DX-N-A-10 Populus... 94 4e-029
gb|CV232744.1|CV232744 WS0198.B21_I13 PT-DX-N-A-10 Populus ... 82 5e-029
gb|CF235233.1|CF235233 PtaJXT0020D1D0107 Poplar cDNA librar... 93 7e-029
gb|CF228523.1|CF228523 PtaXM0014B11B1103 Poplar cDNA librar... 92 1e-028
gb|BU895812.1|BU895812 X031D06 Populus wood cDNA library Po... 92 2e-028
gb|BI127782.1|BI127782 G065P93Y Populus cambium cDNA librar... 77 3e-028
gb|DT475955.1|DT475955 WS0128.BR_M11 PT-GT-FL-A-3 Populus t... 120 4e-028
gb|CF234221.1|CF234221 PtaJXO4A11A1101 Poplar cDNA library ... 91 5e-028
gb|BU837295.1|BU837295 T097B06 Populus apical shoot cDNA li... 115 5e-028
gb|AI166618.1|AI166618 xylem.est.432 Poplar xylem Lambda ZA... 67 5e-028
gb|CK102140.1|CK102140 G065P93.5pR Populus tension wood cDN... 78 9e-028
gb|BI127701.1|BI127701 G064P56Y Populus cambium cDNA librar... 96 9e-028
gb|DT496662.1|DT496662 WS01124.BR_B03 PT-P-FL-A-2 Populus t... 94 3e-027
gb|CN519236.1|CN519236 GQ0104.B3_D02 GQ010 Populus trichoca... 94 3e-027
dbj|AB079510.1| Populus kitakamiensis Pklim1 mRNA for trans... 95 6e-027
gb|CF936757.1|CF936757 PO3009H07 Populus tomentiglandulosa ... 95 6e-027
gb|CF936681.1|CF936681 PO3008H11 Populus tomentiglandulosa ... 95 6e-027
gb|CV265606.1|CV265606 WS02027.B21_L22 PTxN-IB-N-A-11 Popul... 95 6e-027
gb|CF237292.1|CF237292 Ptajxtjxt4D10D1008 Poplar cDNA libra... 95 6e-027
gb|CF237302.1|CF237302 Ptajxtjxt4D9D0907 Poplar cDNA librar... 95 6e-027
gb|CK318742.1|CK318742 X9P02h02 Populus stem seasonal libra... 95 6e-027
gb|AJ773700.1|AJ773700 AJ773700 Populus euphratica shoot 3-... 95 6e-027
gb|DT498550.1|DT498550 WS0115.BR_K17 PT-P-FL-A-2 Populus tr... 95 6e-027
gb|AJ773699.1|AJ773699 AJ773699 Populus euphratica shoot 3-... 95 6e-027
gb|CX171108.1|CX171108 C10_69-40_06.ab1 leaf inoculated wit... 95 6e-027
gb|CX178269.1|CX178269 F02_45-106_12.ab1 leaf inoculated wi... 95 6e-027
gb|AJ777272.1|AJ777272 AJ777272 Populus euphratica root 3-6... 95 6e-027
gb|DT499153.1|DT499153 WS0117.BR_H10 PT-P-FL-A-2 Populus tr... 95 6e-027
gb|AI165319.1|AI165319 A081P18U Hybrid aspen plasmid librar... 119 1e-026
gb|DT496851.1|DT496851 WS01124.BR_L17 PT-P-FL-A-2 Populus t... 94 1e-026
gb|CF235212.1|CF235212 PtaJXT0020B2B0204 Poplar cDNA librar... 94 2e-026
gb|CF235346.1|CF235346 PtaJXT0021G2G0214 Poplar cDNA librar... 94 2e-026
gb|BU885608.1|BU885608 R033F04 Populus root cDNA library Po... 94 2e-026
gb|BI129342.1|BI129342 G089P41Y Populus cambium cDNA librar... 94 2e-026
gb|CF231514.1|CF231514 PtaC0022D12D1208 Poplar cDNA library... 94 2e-026
gb|CF235760.1|CF235760 PtaJXT0026F6F0612 Poplar cDNA librar... 99 2e-026
gb|CF227630.1|CF227630 PtaXM0002E2E0210 Poplar cDNA library... 99 3e-026
gb|BI129071.1|BI129071 G085P54Y Populus cambium cDNA librar... 94 5e-026
gb|CK099458.1|CK099458 A068P58.5pR Hybrid aspen plasmid lib... 94 1e-025
gb|BI131598.1|BI131598 G123P10Y Populus cambium cDNA librar... 96 1e-025
gb|CF235467.1|CF235467 PtaJXT0023B6B0604 Poplar cDNA librar... 116 1e-025
gb|CF234358.1|CF234358 Ptajxojxo1F12F1212 Poplar cDNA libra... 95 1e-025
gb|CK102633.1|CK102633 G085P54.5pR Populus tension wood cDN... 54 2e-025
gb|DT514395.1|DT514395 WS02424.B21_L04 PTxD-ICC-N-A-14 Popu... 77 3e-025
gb|DT494830.1|DT494830 WS01119.BR_J02 PT-P-FL-A-2 Populus t... 91 3e-025
gb|CF229799.1|CF229799 PtaXM0029H12H1216 Poplar cDNA librar... 56 5e-025
gb|CF236568.1|CF236568 PtaJXT4D4D0408 Poplar cDNA library f... 88 7e-025
gb|CV254810.1|CV254810 WS02411.B21_D24 PTxD-ICC-N-A-14 Popu... 87 1e-024
gb|BI130487.1|BI130487 G106P31Y Populus cambium cDNA librar... 60 2e-024
gb|CK108340.1|CK108340 GO85P54 Populus tension wood cDNA li... 96 2e-024
gb|CK096811.1|CK096811 UB27CPH02.3pR Populus active cambium... 88 3e-024
gb|AJ775148.1|AJ775148 AJ775148 Populus euphratica shoot 3-... 88 2e-023
gb|CF232794.1|CF232794 PtaJXO0015H5H0515 Poplar cDNA librar... 74 4e-023
gb|CF228385.1|CF228385 PtaXM0012D11D1107 Poplar cDNA librar... 72 2e-022
gb|CF231651.1|CF231651 PtaC0024A8A0802 Poplar cDNA library ... 95 5e-022
gb|CF230725.1|CF230725 PtaC0012C12C1206 Poplar cDNA library... 79 5e-022
gb|CN549899.1|CN549899 GQ0242.B3_K05 GQ024 Populus trichoca... 69 9e-022
gb|CF235707.1|CF235707 PtaJXT0026B11B1103 Poplar cDNA libra... 77 1e-021
gb|AJ776231.1|AJ776231 AJ776231 Populus euphratica root 3-6... 100 6e-021
>gb|CV254823.1|CV254823 WS02411.B21_E17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_E17 3', mRNA sequence
Length = 942
Score = 120 bits (257), Expect(2) = 5e-041
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / -2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 827 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 648
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 647 FEQLFKETGNFNKNFQSPAKSAEK 576
Score = 66.6 bits (139), Expect(2) = 5e-041
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +2 / -2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK +S FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 563 LTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 414
>gb|CV226522.1|CV226522 WS0164.B21_I06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0164_I06
3', mRNA sequence
Length = 862
Score = 120 bits (257), Expect(2) = 5e-041
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / -1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 814 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 635
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 634 FEQLFKETGNFNKNFQSPAKSAEK 563
Score = 66.6 bits (139), Expect(2) = 5e-041
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +2 / -1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK +S FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 550 LTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 401
>gb|CV281115.1|CV281115 WS0181.B21_A24 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0181_A24 3', mRNA sequence
Length = 912
Score = 117 bits (250), Expect(2) = 2e-039
Identities = 45/84 (53%), Positives = 55/84 (65%)
Frame = +2 / -1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHK+CF HCKG L +YSSM LYCK H
Sbjct: 852 SFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPH 673
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
F+QLFKETG+F+KNF KS++K
Sbjct: 672 FDQLFKETGNFNKNFQSPAKSAEK 601
Score = 64.8 bits (135), Expect(2) = 2e-039
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / -1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 588 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 439
>gb|DT492725.1|DT492725 WS02552.C21_C02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02552_C02 3', mRNA sequence
Length = 890
Score = 117 bits (250), Expect(2) = 2e-039
Identities = 45/84 (53%), Positives = 55/84 (65%)
Frame = +2 / -2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHK+CF HCKG L +YSSM LYCK H
Sbjct: 838 SFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPH 659
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
F+QLFKETG+F+KNF KS++K
Sbjct: 658 FDQLFKETGNFNKNFQSPAKSAEK 587
Score = 64.8 bits (135), Expect(2) = 2e-039
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / -2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 574 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 425
>gb|CX175356.1|CX175356 E12_69-113_10.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 712
Score = 117 bits (250), Expect(2) = 2e-039
Identities = 45/84 (53%), Positives = 55/84 (65%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHK+CF HCKG L +YSSM LYCK H
Sbjct: 170 SFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPH 349
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
F+QLFKETG+F+KNF KS++K
Sbjct: 350 FDQLFKETGNFNKNFQSPAKSAEK 421
Score = 64.8 bits (135), Expect(2) = 2e-039
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 434 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 583
>gb|CX170255.1|CX170255 A05_69-67_01.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 681
Score = 117 bits (250), Expect(2) = 2e-039
Identities = 45/84 (53%), Positives = 55/84 (65%)
Frame = +2 / +1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHK+CF HCKG L +YSSM LYCK H
Sbjct: 166 SFTGTQQKCKACEKTVYPMELLSADGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPH 345
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
F+QLFKETG+F+KNF KS++K
Sbjct: 346 FDQLFKETGNFNKNFQSPAKSAEK 417
Score = 64.8 bits (135), Expect(2) = 2e-039
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 430 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 579
>gb|DT499690.1|DT499690 WS9991.BR_B03 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01110_H14 5', mRNA sequence
Length = 535
Score = 120 bits (257), Expect(2) = 7e-038
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 152 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 331
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 332 FEQLFKETGNFNKNFQSPAKSAEK 403
Score = 56.1 bits (116), Expect(2) = 7e-038
Identities = 23/40 (57%), Positives = 28/40 (70%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYH 448
LTR+PSK +S FSGT C KT YPLE +T+E +YH
Sbjct: 416 LTRSPSKAASMFSGTQXKCATCGKTAYPLEKVTVESQAYH 535
>gb|CA824881.1|CA824881 R49G12 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 662
Score = 110 bits (235), Expect(2) = 3e-037
Identities = 42/75 (56%), Positives = 48/75 (64%)
Frame = +2 / +3
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
+FTGT C CDK +D++ YHK+CF HCKG L +YSSM LYCKTH
Sbjct: 147 AFTGTLDKCKACDKTVYFVDMMSLEGVPYHKSCFKCSHCKGTLVMSNYSSMDGVLYCKTH 326
Query: 251 FEQLFKETGSFSKNF 295
FEQLFKE G FSKNF
Sbjct: 327 FEQLFKEGGDFSKNF 371
Score = 63.8 bits (133), Expect(2) = 3e-037
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
L+R PSKLSS F GT AC KTVYPLE +T+E YHK ++GG
Sbjct: 402 LSRIPSKLSSVFCGTQDKCSACGKTVYPLEKVTMEGECYHKTCFRCAYGG 551
>gb|CX183497.1|CX183497 G02_45-45_14.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 626
Score = 120 bits (257), Expect(2) = 1e-036
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / +3
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 246 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 425
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 426 FEQLFKETGNFNKNFQSPAKSAEK 497
Score = 51.9 bits (107), Expect(2) = 1e-036
Identities = 22/39 (56%), Positives = 26/39 (66%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSY 445
LTR+PSK +S FSGT AC KT YPLE T+E +Y
Sbjct: 510 LTRSPSKAASMFSGTQEKCAACGKTAYPLEKGTVESQAY 626
>gb|DT516153.1|DT516153 WS02430.B21_I23 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02430_I23 3', mRNA sequence
Length = 420
Score = 120 bits (257), Expect(2) = 3e-033
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / -1
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 348 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 169
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 168 FEQLFKETGNFNKNFQSPAKSAEK 97
Score = 40.0 bits (81), Expect(2) = 3e-033
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2 / -1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYP 412
LTR+PSK +S FSGT C KT YP
Sbjct: 84 LTRSPSKAASMFSGTQEKCATCGKTAYP 1
>gb|AI163170.1|AI163170 A034p39u Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 497
Score = 120 bits (257), Expect(2) = 4e-033
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 107 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 286
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 287 FEQLFKETGNFNKNFQSPAKSAEK 358
Score = 40.0 bits (81), Expect(2) = 4e-033
Identities = 16/28 (57%), Positives = 18/28 (64%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYP 412
LTR+PSK +S FSGT C KT YP
Sbjct: 371 LTRSPSKAASMFSGTQEKCATCGKTAYP 454
>gb|DT499621.1|DT499621 WS0118.BR_N06 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0118_N06
5', mRNA sequence
Length = 655
Score = 104 bits (221), Expect(2) = 3e-032
Identities = 39/88 (44%), Positives = 49/88 (55%)
Frame = +2 / +3
Query: 32 ACSHRQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXS 211
+CS G M++F GTQ C CDK +D L YHK CF HC+G L +
Sbjct: 75 SCSSSLRGEKNMAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSN 254
Query: 212 YSSMXXXLYCKTHFEQLFKETGSFSKNF 295
YSS LYC+ H++QLFK TGS K+F
Sbjct: 255 YSSFEGVLYCRPHYDQLFKRTGSLDKSF 338
Score = 53.8 bits (111), Expect(2) = 3e-032
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 345 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTQYHRSCFKCTHG 524
Query: 476 G 478
G
Sbjct: 525 G 527
>gb|CV245577.1|CV245577 WS0257.B21_M23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0257_M23 3', mRNA sequence
Length = 956
Score = 99.6 bits (211), Expect(2) = 4e-032
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +2 / -3
Query: 62 TMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYC 241
+M++F GT C CDK +D L YHK CF HCKG L +YSS LYC
Sbjct: 870 SMATFAGTTQKCKACDKTVYLVDQLTVDNKFYHKACFRCHHCKGTLKLSNYSSFEGVLYC 691
Query: 242 KTHFEQLFKETGSFSKNFTPXXKS 313
K HF+QLFK TGS K+F K+
Sbjct: 690 KPHFDQLFKMTGSLDKSFEGTPKT 619
Score = 57.9 bits (120), Expect(2) = 4e-032
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +2 / -3
Query: 344 SKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
SK+SS F+GT AC KTVYPLE + ++ SYHK +HGG
Sbjct: 579 SKVSSMFAGTQEKCVACNKTVYPLEKVAVDGTSYHKACFRCAHGG 445
>gb|DT496208.1|DT496208 WS01122.BR_L21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01122_L21 5', mRNA sequence
Length = 926
Score = 104 bits (221), Expect(2) = 4e-032
Identities = 39/88 (44%), Positives = 49/88 (55%)
Frame = +2 / +3
Query: 32 ACSHRQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXS 211
+CS G M++F GTQ C CDK +D L YHK CF HC+G L +
Sbjct: 75 SCSSSLRGEKNMAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSN 254
Query: 212 YSSMXXXLYCKTHFEQLFKETGSFSKNF 295
YSS LYC+ H++QLFK TGS K+F
Sbjct: 255 YSSFEGVLYCRPHYDQLFKRTGSLDKSF 338
Score = 53.3 bits (110), Expect(2) = 4e-032
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 345 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCTHG 524
Query: 476 G 478
G
Sbjct: 525 G 527
>gb|CV227011.1|CV227011 WS0165.B21_O23 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_O23
3', mRNA sequence
Length = 889
Score = 99.6 bits (211), Expect(2) = 4e-032
Identities = 39/84 (46%), Positives = 47/84 (55%)
Frame = +2 / -1
Query: 62 TMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYC 241
+M++F GT C CDK +D L YHK CF HCKG L +YSS LYC
Sbjct: 766 SMATFAGTTQKCKACDKTVYLVDQLTVDNKFYHKACFRCHHCKGTLKLSNYSSFEGVLYC 587
Query: 242 KTHFEQLFKETGSFSKNFTPXXKS 313
K HF+QLFK TGS K+F K+
Sbjct: 586 KPHFDQLFKMTGSLDKSFEGTPKT 515
Score = 57.9 bits (120), Expect(2) = 4e-032
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +2 / -1
Query: 344 SKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
SK+SS F+GT AC KTVYPLE + ++ SYHK +HGG
Sbjct: 475 SKVSSMFAGTQEKCVACNKTVYPLEKVAVDGTSYHKACFRCAHGG 341
>gb|DT498959.1|DT498959 WS0116.BR_N13 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_N13
5', mRNA sequence
Length = 642
Score = 104 bits (221), Expect(2) = 4e-032
Identities = 39/88 (44%), Positives = 49/88 (55%)
Frame = +2 / +3
Query: 32 ACSHRQAGVGTMSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXS 211
+CS G M++F GTQ C CDK +D L YHK CF HC+G L +
Sbjct: 75 SCSSSLRGEKNMAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSN 254
Query: 212 YSSMXXXLYCKTHFEQLFKETGSFSKNF 295
YSS LYC+ H++QLFK TGS K+F
Sbjct: 255 YSSFEGVLYCRPHYDQLFKRTGSLDKSF 338
Score = 53.3 bits (110), Expect(2) = 4e-032
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 345 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCTHG 524
Query: 476 G 478
G
Sbjct: 525 G 527
>gb|BI128433.1|BI128433 G075P84Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 563
Score = 91.3 bits (193), Expect(2) = 1e-031
Identities = 33/56 (58%), Positives = 41/56 (73%)
Frame = +2 / +3
Query: 155 YHKTCFXXXHCKGILSXXSYSSMXXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
YHK+CF HCKG L +YSSM LYCK HF+QLFKETG+F+KNF +S++K
Sbjct: 36 YHKSCFKCFHCKGTLKLSNYSSMEGVLYCKPHFDQLFKETGNFNKNFQSAARSAEK 203
Score = 64.8 bits (135), Expect(2) = 1e-031
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 216 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 365
>gb|DT509779.1|DT509779 WS02424.BR_L04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_L04 5', mRNA sequence
Length = 909
Score = 96.4 bits (204), Expect(2) = 5e-031
Identities = 37/83 (44%), Positives = 44/83 (53%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M+ F GT C C+K +D L YHK CF HCKG L +YSS LYCK
Sbjct: 237 MAPFAGTTQKCKSCEKTVYFVDQLTADDKVYHKACFRCHHCKGTLKLSNYSSFEGVLYCK 416
Query: 245 THFEQLFKETGSFSKNFTPXXKS 313
HF+QL K TGS K+F K+
Sbjct: 417 PHFDQLLKMTGSLDKSFKGTSKT 485
Score = 57.4 bits (119), Expect(2) = 5e-031
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +2 / +3
Query: 344 SKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
SK+SS F+GT AC+KTVYP+E + ++ SYHK +HGG
Sbjct: 525 SKVSSMFAGTQEKCVACKKTVYPIERVAVDGTSYHKACFRCAHGG 659
>gb|CV275792.1|CV275792 WS0177.B21_K03 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0177_K03 3', mRNA sequence
Length = 875
Score = 99.1 bits (210), Expect(2) = 1e-030
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L YHK CF HC+G L +YSS LYC+
Sbjct: 97 MAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCR 276
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 277 PHYDQLFKRTGSLDKSF 327
Score = 53.3 bits (110), Expect(2) = 1e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 334 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCTHG 513
Query: 476 G 478
G
Sbjct: 514 G 516
>gb|CF230497.1|CF230497 PtaC0009B11B1103 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 99.1 bits (210), Expect(2) = 1e-030
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L YHK CF HC+G L +YSS LYC+
Sbjct: 116 MAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCR 295
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 296 PHYDQLFKRTGSLDKSF 346
Score = 53.3 bits (110), Expect(2) = 1e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 353 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRRCFKCTHG 532
Query: 476 G 478
G
Sbjct: 533 G 535
>gb|CF234885.1|CF234885 PtaJXT0016C7C0705 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 99.1 bits (210), Expect(2) = 1e-030
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L YHK CF HC+G L +YSS LYC+
Sbjct: 118 MAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCR 297
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 298 PHYDQLFKRTGSLDKSF 348
Score = 53.3 bits (110), Expect(2) = 1e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 355 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRSCFKCTHG 534
Query: 476 G 478
G
Sbjct: 535 G 537
>gb|CF236473.1|CF236473 PtaJXT3C2C0206 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 99.1 bits (210), Expect(2) = 1e-030
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L YHK CF HC+G L +YSS LYC+
Sbjct: 119 MAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCR 298
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 299 PHYDQLFKRTGSLDKSF 349
Score = 53.3 bits (110), Expect(2) = 1e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 356 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRRCFKCTHG 535
Query: 476 G 478
G
Sbjct: 536 G 538
>gb|CF237157.1|CF237157 Ptajxtjxt2G2G0214 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 681
Score = 99.1 bits (210), Expect(2) = 1e-030
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L YHK CF HC+G L +YSS LYC+
Sbjct: 121 MAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCR 300
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 301 PHYDQLFKRTGSLDKSF 351
Score = 53.3 bits (110), Expect(2) = 1e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 358 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEKVTVNGTPYHRRCFKCTHG 537
Query: 476 G 478
G
Sbjct: 538 G 540
>gb|CF227807.1|CF227807 PtaXM0004H3H0315 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 606
Score = 99.1 bits (210), Expect(2) = 1e-030
Identities = 36/77 (46%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L YHK CF HC+G L +YSS LYC+
Sbjct: 121 MAAFAGTQQKCMACDKTVYLVDKLTADNRIYHKACFRCHHCRGTLKLSNYSSFEGVLYCR 300
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 301 PHYDQLFKRTGSLDKSF 351
Score = 53.3 bits (110), Expect(2) = 1e-030
Identities = 23/61 (37%), Positives = 32/61 (52%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 358 TPKIAKPEKPVDNENASKVSNLFAGTREKCVGCNKTVYPIEXVTVNGTPYHRRCFKCTHG 537
Query: 476 G 478
G
Sbjct: 538 G 540
>gb|BU895202.1|BU895202 X020F05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 673
Score = 95.9 bits (203), Expect(2) = 6e-030
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 82 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 261
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 262 PHYDQLFKRTGSLDKSF 312
Score = 54.2 bits (112), Expect(2) = 6e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 319 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKSTHG 498
Query: 476 G 478
G
Sbjct: 499 G 501
>gb|BI129316.1|BI129316 G089P01Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 442
Score = 95.9 bits (203), Expect(2) = 8e-030
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 11 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 190
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 191 PHYDQLFKRTGSLDKSF 241
Score = 53.3 bits (110), Expect(2) = 8e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 248 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 427
Query: 476 G 478
G
Sbjct: 428 G 430
>gb|BU895327.1|BU895327 X022E11 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 616
Score = 96.4 bits (204), Expect(2) = 8e-030
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 99 MAAFSGTQQKCMACDKTAYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 278
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 279 PHYDQLFKRTGSLDKSF 329
Score = 53.3 bits (110), Expect(2) = 8e-030
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 336 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 515
Query: 476 G 478
G
Sbjct: 516 G 518
>gb|CF235176.1|CF235176 PtaJXT0019G11G1113 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 95.9 bits (203), Expect(2) = 1e-029
Identities = 35/77 (45%), Positives = 46/77 (59%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 89 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFXCHHCRGTLKLSNYCSFEGVLYCR 268
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 269 PHYDQLFKRTGSLDKSF 319
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 326 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 505
Query: 476 G 478
G
Sbjct: 506 G 508
>gb|CF228514.1|CF228514 PtaXM0013H9H0915 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 751
Score = 95.9 bits (203), Expect(2) = 1e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 92 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 271
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 272 PHYDQLFKRTGSLDKSF 322
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 508
Query: 476 G 478
G
Sbjct: 509 G 511
>gb|BU896291.1|BU896291 X038E03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 723
Score = 95.9 bits (203), Expect(2) = 1e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 92 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 271
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 272 PHYDQLFKRTGSLDKSF 322
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 508
Query: 476 G 478
G
Sbjct: 509 G 511
>gb|CF236101.1|CF236101 PtaJXT0030F3F0311 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 622
Score = 95.9 bits (203), Expect(2) = 1e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 88 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 267
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 268 PHYDQLFKRTGSLDKSF 318
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 325 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 504
Query: 476 G 478
G
Sbjct: 505 G 507
>gb|BU898117.1|BU898117 X075A09 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 578
Score = 95.9 bits (203), Expect(2) = 1e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 96 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 275
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 276 PHYDQLFKRTGSLDKSF 326
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 333 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 512
Query: 476 G 478
G
Sbjct: 513 G 515
>gb|BI130965.1|BI130965 G113P33Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 565
Score = 120 bits (257), Expect(2) = 1e-029
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / +3
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 234 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 413
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 414 FEQLFKETGNFNKNFQSPAKSAEK 485
Score = 28.6 bits (56), Expect(2) = 1e-029
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2 / +3
Query: 329 LTRAPSKLSSXFSGTXXXXXAC 394
LTR+PS+ +S FSGT C
Sbjct: 498 LTRSPSRAASMFSGTQEKCATC 563
>gb|DT496684.1|DT496684 WS01124.BR_C10 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01124_C10 5', mRNA sequence
Length = 888
Score = 95.5 bits (202), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 182 MAAFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 361
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 362 PHYDQLFKRTGSLDKSF 412
Score = 53.3 bits (110), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 419 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 598
Query: 476 G 478
G
Sbjct: 599 G 601
>gb|DT495708.1|DT495708 WS01121.BR_E05 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01121_E05 5', mRNA sequence
Length = 865
Score = 95.5 bits (202), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 91 MAAFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 270
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 271 PHYDQLFKRTGSLDKSF 321
Score = 53.3 bits (110), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 328 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 507
Query: 476 G 478
G
Sbjct: 508 G 510
>gb|DT497463.1|DT497463 WS01126.BR_I20 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01126_I20 5', mRNA sequence
Length = 810
Score = 95.5 bits (202), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 93 MAAFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 272
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 273 PHYDQLFKRTGSLDKSF 323
Score = 53.3 bits (110), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 330 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 509
Query: 476 G 478
G
Sbjct: 510 G 512
>gb|CV225965.1|CV225965 WS0162.B21_O08 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_O08
3', mRNA sequence
Length = 797
Score = 95.5 bits (202), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 66 MAAFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 245
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 246 PHYDQLFKRTGSLDKSF 296
Score = 53.3 bits (110), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 303 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 482
Query: 476 G 478
G
Sbjct: 483 G 485
>gb|CF228458.1|CF228458 PtaXM0013C1C0105 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 92 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 271
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 272 PHYDQLFKRTGSLDKSF 322
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F GT C KTVYP+E +T+ YH+ +HG
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 508
Query: 476 G 478
G
Sbjct: 509 G 511
>gb|CF234834.1|CF234834 PtaJXT0015F8F0812 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 66 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 245
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 246 PHYDQLFKRTGSLDKSF 296
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F GT C KTVYP+E +T+ YH+ +HG
Sbjct: 303 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 482
Query: 476 G 478
G
Sbjct: 483 G 485
>gb|DT471943.1|DT471943 WS0122.BR_J06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_J06 5', mRNA sequence
Length = 696
Score = 95.5 bits (202), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 44/77 (57%)
Frame = +2 / +2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 92 MAAFAGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 271
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 272 PHYDQLFKRTGSLDKSF 322
Score = 53.3 bits (110), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 329 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 508
Query: 476 G 478
G
Sbjct: 509 G 511
>gb|CF228743.1|CF228743 PtaXM0016H2H0216 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 684
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 94 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 273
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 274 PHYDQLFKRTGSLDKSF 324
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F GT C KTVYP+E +T+ YH+ +HG
Sbjct: 331 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 510
Query: 476 G 478
G
Sbjct: 511 G 513
>gb|CF236106.1|CF236106 PtaJXT0030F8F0812 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 685
Score = 95.9 bits (203), Expect(2) = 2e-029
Identities = 34/77 (44%), Positives = 45/77 (58%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 99 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 278
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 279 PHYDQLFKRTGSLDKSF 329
Score = 52.8 bits (109), Expect(2) = 2e-029
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F GT C KTVYP+E +T+ YH+ +HG
Sbjct: 336 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 515
Query: 476 G 478
G
Sbjct: 516 G 518
>gb|DT470104.1|DT470104 WS01919.C21_O05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01919_O05 3', mRNA sequence
Length = 856
Score = 94.1 bits (199), Expect(2) = 4e-029
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2 / -2
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F GTQ C CD+ +D L +HK CF HC+G L +Y S LYC+
Sbjct: 846 MAAFAGTQQKCMACDRTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 667
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 666 PHYDQLFKRTGSLDKSF 616
Score = 53.3 bits (110), Expect(2) = 4e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / -2
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 609 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 430
Query: 476 G 478
G
Sbjct: 429 G 427
>gb|CV232744.1|CV232744 WS0198.B21_I13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0198_I13 3', mRNA sequence
Length = 730
Score = 82.2 bits (173), Expect(2) = 5e-029
Identities = 31/52 (59%), Positives = 37/52 (71%)
Frame = +2 / -1
Query: 167 CFXXXHCKGILSXXSYSSMXXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
CF HCKG L +YSSM LYCK HF+QLFKETG+F+KNF KS++K
Sbjct: 730 CFKCFHCKGTLKLSNYSSMEGVLYCKPHFDQLFKETGNFNKNFQSPAKSAEK 575
Score = 64.8 bits (135), Expect(2) = 5e-029
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / -1
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 562 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 413
>gb|CF235233.1|CF235233 PtaJXT0020D1D0107 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 93.2 bits (197), Expect(2) = 7e-029
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GT C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 19 MAAFSGTXQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 198
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 199 PHYDQLFKRTGSLDKSF 249
Score = 53.3 bits (110), Expect(2) = 7e-029
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 256 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 435
Query: 476 G 478
G
Sbjct: 436 G 438
>gb|CF228523.1|CF228523 PtaXM0014B11B1103 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 763
Score = 92.3 bits (195), Expect(2) = 1e-028
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L +Y S LYC+
Sbjct: 19 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNYCSFEGVLYCR 198
Query: 245 THFEQLFKETGSFSKNF 295
+++QLFK TGS K+F
Sbjct: 199 PYYDQLFKGTGSLDKSF 249
Score = 53.3 bits (110), Expect(2) = 1e-028
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 256 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 435
Query: 476 G 478
G
Sbjct: 436 G 438
>gb|BU895812.1|BU895812 X031D06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 627
Score = 91.8 bits (194), Expect(2) = 2e-028
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2 / +1
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF HC+G L + S LYC+
Sbjct: 97 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHCRGTLKLSNNCSFEGVLYCR 276
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 277 PHYDQLFKRTGSLDKSF 327
Score = 53.3 bits (110), Expect(2) = 2e-028
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2 / +1
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F+GT C KTVYP+E +T+ YH+ +HG
Sbjct: 334 TPKIVKPEKPVDNENASKVSNLFAGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 513
Query: 476 G 478
G
Sbjct: 514 G 516
>gb|BI127782.1|BI127782 G065P93Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 564
Score = 76.7 bits (161), Expect(3) = 3e-028
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2 / +2
Query: 182 HCKGILSXXSYSSMXXXLYCKTHFEQLFKETGSFSKNFTPXXKSSDK 322
HCKG L +YSSM LYCK HF+QLFKETG+F+KNF +S++K
Sbjct: 62 HCKGTLKLSNYSSMEGVLYCKPHFDQLFKETGNFNKNFQSAARSAEK 202
Score = 64.8 bits (135), Expect(3) = 3e-028
Identities = 26/50 (52%), Positives = 31/50 (62%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHGG 478
LTR+PSK + FSGT C KT YPLE +T+E +YHK SHGG
Sbjct: 215 LTRSPSKAAGMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGG 364
Score = 21.7 bits (41), Expect(3) = 3e-028
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2 / +3
Query: 131 LLXXXXXTYHKTCF 172
LL YHK+CF
Sbjct: 12 LLSADGVAYHKSCF 53
>gb|DT475955.1|DT475955 WS0128.BR_M11 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_M11 5', mRNA sequence
Length = 454
Score = 120 bits (257), Expect(2) = 4e-028
Identities = 47/84 (55%), Positives = 55/84 (65%)
Frame = +2 / +2
Query: 71 SFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCKTH 250
SFTGTQ C C+K ++LL YHKTCF HCKG L +YSSM LYCK H
Sbjct: 152 SFTGTQQKCKACEKTVYPMELLSADGVAYHKTCFKCFHCKGTLKLSNYSSMEGVLYCKPH 331
Query: 251 FEQLFKETGSFSKNFTPXXKSSDK 322
FEQLFKETG+F+KNF KS++K
Sbjct: 332 FEQLFKETGNFNKNFQSPAKSAEK 403
Score = 23.1 bits (44), Expect(2) = 4e-028
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 329 LTRAPSKLSSXFS 367
LTR+PSK +S FS
Sbjct: 416 LTRSPSKAASMFS 454
>gb|CF234221.1|CF234221 PtaJXO4A11A1101 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 697
Score = 90.9 bits (192), Expect(2) = 5e-028
Identities = 33/77 (42%), Positives = 44/77 (57%)
Frame = +2 / +3
Query: 65 MSSFTGTQXXCAECDKXXXXIDLLXXXXXTYHKTCFXXXHCKGILSXXSYSSMXXXLYCK 244
M++F+GTQ C CDK +D L +HK CF H +G L +Y S LYC+
Sbjct: 90 MAAFSGTQQKCMACDKTVYLVDKLTADNRVFHKACFRCHHXRGTLKLSNYCSFEGVLYCR 269
Query: 245 THFEQLFKETGSFSKNF 295
H++QLFK TGS K+F
Sbjct: 270 PHYDQLFKRTGSLDKSF 320
Score = 52.8 bits (109), Expect(2) = 5e-028
Identities = 22/61 (36%), Positives = 30/61 (49%)
Frame = +2 / +3
Query: 296 TPXXKSSDKXXLTRAPSKLSSXFSGTXXXXXACQKTVYPLEXLTLEXXSYHKXXXXXSHG 475
TP +K SK+S+ F GT C KTVYP+E +T+ YH+ +HG
Sbjct: 327 TPKIVKPEKPVDNENASKVSNLFGGTREKCVGCDKTVYPIEKVTVNGTPYHRSCFKCTHG 506
Query: 476 G 478
G
Sbjct: 507 G 509
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 150,811,779
Number of Sequences: 369679
Number of extensions: 1128217
Number of successful extensions: 19881
Number of sequences better than 1.0e-020: 142
length of database: 67,802,888
effective HSP length: 50
effective length of database: 49,318,938
effective search space used: 5474402118
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)