TBLASTX 2.2.10 [Oct-19-2004]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= QAZ2b01.yg.2.1
         (541 letters)

Database: Populus_nucl_with_EST.fasta 
           369,679 sequences; 203,408,664 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|CX182279.1|CX182279  G09_45-117_13.ab1 leaf inoculated wi...   146   1e-034
>gb|CX182279.1|CX182279 G09_45-117_13.ab1 leaf inoculated with Marssonia pathogen of
           Populus euramericana Populus x canadensis cDNA, mRNA
           sequence
          Length = 685

 Score =  146 bits (313), Expect = 1e-034
 Identities = 57/90 (63%), Positives = 79/90 (87%)
 Frame = +3 / +1

                                                                       
Query: 12  LXNDVLDRAKIEAGKLELEAVPFDLRSLMDDVISLFSSKSREKCIELAVFVCDNVPKDVL 191
           L N+VLD+AKIE+GK+ELE + FDLR++MDDV++LFS K+ EK IELAV+V D VP+ ++
Sbjct: 85  LINEVLDQAKIESGKIELEEMQFDLRAIMDDVLALFSGKAHEKGIELAVYVSDGVPEMLI 264

                                         
Query: 192 GDPWRFRQILTNLVGNAVKFTERGHVFVRV 281
           GDP RFRQI+TNL+GN++KFT++GH+F+ V
Sbjct: 265 GDPGRFRQIITNLMGNSIKFTKKGHIFLTV 354
  Database: Populus_nucl_with_EST.fasta
    Posted date:  Feb 7, 2006  2:49 PM
  Number of letters in database: 203,408,664
  Number of sequences in database:  369,679
  
Lambda     K      H
   0.318    0.134    0.401 


Matrix: BLOSUM62
Number of Hits to DB: 229,110,534
Number of Sequences: 369679
Number of extensions: 3114381
Number of successful extensions: 46600
Number of sequences better than 1.0e-020: 1
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 6265505152
frameshift window, decay const: 40,  0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)