TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAF36h01.yg.2.1
(689 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase ... 215 e-110
gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A ... 215 e-110
gb|BU896715.1|BU896715 X044F08 Populus wood cDNA library Po... 214 1e-093
gb|BU836626.1|BU836626 T088H07 Populus apical shoot cDNA li... 209 3e-083
gb|BU896208.1|BU896208 X037C05 Populus wood cDNA library Po... 204 3e-081
gb|CK115022.1|CK115022 Y002F04 Populus infected leaf substr... 215 4e-071
gb|CK107894.1|CK107894 G058P86 Populus tension wood cDNA li... 215 7e-069
gb|BI127343.1|BI127343 G058P86Y Populus cambium cDNA librar... 215 7e-069
gb|BI131594.1|BI131594 G123P05Y Populus cambium cDNA librar... 213 1e-066
gb|CV256150.1|CV256150 WS0243.B21_B03 PTxD-ICC-N-A-14 Popul... 204 7e-066
gb|CX175703.1|CX175703 C06_69-40_06.ab1 leaf inoculated wit... 215 2e-060
gb|CK107886.1|CK107886 G058P78 Populus tension wood cDNA li... 215 2e-055
gb|BI127335.1|BI127335 G058P78Y Populus cambium cDNA librar... 215 3e-055
gb|BU828319.1|BU828319 K020P84P Populus apical shoot cDNA l... 148 8e-054
gb|BI130933.1|BI130933 G112P89Y Populus cambium cDNA librar... 177 7e-053
gb|BI128862.1|BI128862 G082P55Y Populus cambium cDNA librar... 190 6e-048
gb|CA927064.1|CA927064 MTU6CR.P4.E04 Aspen root cDNA Librar... 181 4e-045
gb|CV266155.1|CV266155 WS02029.B21_E02 PTxN-IB-N-A-11 Popul... 171 4e-042
gb|BI128164.1|BI128164 G071P89Y Populus cambium cDNA librar... 163 9e-040
gb|CV130556.1|CV130556 B9SP04b08 Populus stem seasonal libr... 156 1e-037
gb|BP924653.1|BP924653 BP924653 full-length enriched poplar... 142 2e-033
gb|DT516843.1|DT516843 WS02432.B21_J05 PTxD-ICC-N-A-14 Popu... 138 3e-032
gb|BU821516.1|BU821516 UB24CPB10 Populus tremula cambium cD... 135 3e-031
gb|CA933005.1|CA933005 MTU5CS.P2.C06 Aspen stem cDNA Librar... 130 1e-029
gb|DN496569.1|DN496569 P078B11.5pR Populus petioles cDNA li... 122 6e-029
gb|CF236393.1|CF236393 PtaJXT2C3C0305 Poplar cDNA library f... 126 2e-028
gb|DT510953.1|DT510953 WS02429.BR_C15 PTxD-ICC-N-A-14 Popul... 90 4e-027
gb|BI130837.1|BI130837 G111P47Y Populus cambium cDNA librar... 119 2e-026
gb|BU897184.1|BU897184 X052G04 Populus wood cDNA library Po... 100 7e-021
>gb|AY535003.1| Populus tremuloides endo-1,4-beta-glucanase (Kor1) mRNA, complete cds
Length = 2562
Score = 215 bits (465), Expect(2) = e-110
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = -2 / +2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 1352 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 1531
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 1532 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 1663
Score = 202 bits (435), Expect(2) = e-110
Identities = 79/116 (68%), Positives = 88/116 (75%)
Frame = -2 / +2
Query: 652 EXIDYXXXXXECHSCSDLAXXXXAXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGR 473
E IDY EC SCSDLA A ASIVFKD+K YS KLV GAK L+KF R QRGR
Sbjct: 1016 EDIDYDRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGR 1195
Query: 472 YSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
YS GS+ A FYNSTSYWDEF+WGGAW+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 1196 YSAGGSEAATFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGG 1363
Score = 130 bits (278), Expect(3) = 6e-057
Identities = 62/102 (60%), Positives = 70/102 (68%)
Frame = +3 / -1
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 1662 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 1483
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 1482 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 1357
Score = 98.2 bits (208), Expect(3) = 6e-057
Identities = 48/71 (67%), Positives = 51/71 (71%)
Frame = +3 / -1
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGLYRPRC 485
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*K+A S+P LY PR
Sbjct: 1362 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KVAASEPPALYLPRW 1183
Query: 486 SLPNLYRALAP 518
SL NL R LAP
Sbjct: 1182 SLANLKRVLAP 1150
Score = 94.1 bits (199), Expect(2) = 3e-028
Identities = 47/102 (46%), Positives = 63/102 (61%)
Frame = +2 / -3
Query: 2 PPRRVSRFKIVAV*RSKESCVDSVLKRLRPSMVELY*SSFGEVE*IEYR*IRAHDVVGLV 181
P R +S FKI+ * E +D +LK LRPSMV L +SF ++ E I AHD GLV
Sbjct: 1663 PSRCISSFKIITK*GC*EGSIDDILKGLRPSMV*LDQASFCSIKLCENWQI*AHDYTGLV 1484
Query: 182 VECPQYFFVRVPWT*EESQPAEKNLSSWKFVIPGKHSVVWTS 307
V+C Q FF+ + E+S A+K LS+ K V+P KH++VW S
Sbjct: 1483 VKCTQNFFIWITRAQEQS*AAQK*LSTSKLVVPAKHAIVWPS 1358
Score = 51.0 bits (105), Expect(2) = 3e-028
Identities = 21/83 (25%), Positives = 44/83 (53%)
Frame = +2 / -3
Query: 311 PVCSSVLRHSRGCGDGEVRVVPRGEVHPRTAPHELVPVAGGVVEDGLVRSVGAVSPTLQP 490
P C+S+L +R C ++ ++ + P + P++ +PV ++E G + VS L P
Sbjct: 1357 PKCTSMLG*ARHCSKLKIGIISSCII*PSSTPNKFIPVTS*IIESGGF*TTCTVSTPLVP 1178
Query: 491 AELVQGLGALDELVGVGLAVLEH 559
+ + G +++ + VGL + E+
Sbjct: 1177 CKFKESFGTMNKFLRVGLVIFEN 1109
Score = 31.3 bits (62), Expect(3) = 6e-057
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3 / -1
Query: 558 TMEAXXXXAXXXXARSEQEWHSXXXXX*SMXS 653
T++A A ARSEQE HS *SM S
Sbjct: 1110 TIDAEAKAAAISAARSEQELHSVTGLS*SMSS 1015
>gb|AY660967.1| Populus tremula x Populus tremuloides Cel9A mRNA, complete cds
Length = 1860
Score = 215 bits (465), Expect(2) = e-110
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = -2 / +1
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 1090 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 1269
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 1270 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 1401
Score = 201 bits (434), Expect(2) = e-110
Identities = 79/116 (68%), Positives = 88/116 (75%)
Frame = -2 / +1
Query: 652 EXIDYXXXXXECHSCSDLAXXXXAXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGR 473
E IDY EC SCSDLA A ASIVFKD+K YS KLV GAK L+KF R QRGR
Sbjct: 754 EDIDYDRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGR 933
Query: 472 YSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
YS S+ AIFYNSTSYWDEF+WGGAW+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 934 YSAGSSEAAIFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGG 1101
Score = 130 bits (278), Expect(3) = 4e-056
Identities = 62/102 (60%), Positives = 70/102 (68%)
Frame = +3 / -2
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 1400 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 1221
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 1220 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 1095
Score = 95.5 bits (202), Expect(3) = 4e-056
Identities = 48/71 (67%), Positives = 50/71 (70%)
Frame = +3 / -2
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGLYRPRC 485
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*KMA S+ LY PR
Sbjct: 1100 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KMAASELPALYLPRW 921
Query: 486 SLPNLYRALAP 518
SL NL R LAP
Sbjct: 920 SLANLKRVLAP 888
Score = 94.1 bits (199), Expect(2) = 6e-029
Identities = 47/102 (46%), Positives = 63/102 (61%)
Frame = +2 / -1
Query: 2 PPRRVSRFKIVAV*RSKESCVDSVLKRLRPSMVELY*SSFGEVE*IEYR*IRAHDVVGLV 181
P R +S FKI+ * E +D +LK LRPSMV L +SF ++ E I AHD GLV
Sbjct: 1401 PSRCISSFKIITK*GC*EGSIDDILKGLRPSMV*LDQASFCSIKLCENWQI*AHDYTGLV 1222
Query: 182 VECPQYFFVRVPWT*EESQPAEKNLSSWKFVIPGKHSVVWTS 307
V+C Q FF+ + E+S A+K LS+ K V+P KH++VW S
Sbjct: 1221 VKCTQNFFIWITRAQEQS*AAQK*LSTSKLVVPAKHAIVWPS 1096
Score = 53.3 bits (110), Expect(2) = 6e-029
Identities = 21/83 (25%), Positives = 45/83 (54%)
Frame = +2 / -1
Query: 311 PVCSSVLRHSRGCGDGEVRVVPRGEVHPRTAPHELVPVAGGVVEDGLVRSVGAVSPTLQP 490
P C+S+L +R C ++ ++ + P + P++ +PV ++E+G + VS L P
Sbjct: 1095 PKCTSMLG*ARHCSKLKIGIISSCIIQPSSTPNKFIPVTS*IIENGGF*TTCTVSTPLVP 916
Query: 491 AELVQGLGALDELVGVGLAVLEH 559
+ + G +++ + VGL + E+
Sbjct: 915 CKFKESFGTMNKFLRVGLVIFEN 847
Score = 31.3 bits (62), Expect(3) = 4e-056
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3 / -2
Query: 558 TMEAXXXXAXXXXARSEQEWHSXXXXX*SMXS 653
T++A A ARSEQE HS *SM S
Sbjct: 848 TIDAEAKAAAISAARSEQELHSVTGLS*SMSS 753
>gb|BU896715.1|BU896715 X044F08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 652
Score = 214 bits (461), Expect(2) = 1e-093
Identities = 82/104 (78%), Positives = 93/104 (89%)
Frame = -2 / +2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEE L TFHNQT +MCSYLP+F
Sbjct: 209 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEFLSTFHNQTSIIMCSYLPIFTK 388
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 389 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 520
Score = 149 bits (320), Expect(2) = 1e-093
Identities = 55/73 (75%), Positives = 63/73 (86%)
Frame = -2 / +2
Query: 523 VKGAKALYKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATA 344
V GAK L+KF R QRGRYS GS+ AIFYNSTSYWDEF+WGGAW+Y+ATGNNSYL +AT
Sbjct: 2 VHGAKTLFKFARDQRGRYSAGGSEAAIFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATM 181
Query: 343 PGMAKHAGAYWFG 305
PG+AKHAGA+W G
Sbjct: 182 PGLAKHAGAFWGG 220
Score = 127 bits (271), Expect(2) = 1e-052
Identities = 61/102 (59%), Positives = 69/102 (67%)
Frame = +3 / -2
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 519 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 340
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL SS G PG +*AP SL SQ++TP* G P
Sbjct: 339 *NVLRNSSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 214
Score = 100 bits (212), Expect(2) = 1e-052
Identities = 49/71 (69%), Positives = 51/71 (71%)
Frame = +3 / -2
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGLYRPRC 485
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*KMA S+P LY PR
Sbjct: 219 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KMAASEPPALYLPRW 40
Query: 486 SLPNLYRALAP 518
SL NL R LAP
Sbjct: 39 SLANLKRVLAP 7
Score = 94.1 bits (199), Expect(2) = 3e-025
Identities = 47/102 (46%), Positives = 63/102 (61%)
Frame = +2 / -1
Query: 2 PPRRVSRFKIVAV*RSKESCVDSVLKRLRPSMVELY*SSFGEVE*IEYR*IRAHDVVGLV 181
P R +S FKI+ * E +D +LK LRPSMV L +SF ++ E I AHD GLV
Sbjct: 520 PSRCISSFKIITK*GC*EGSIDDILKGLRPSMV*LDQASFCSIKLCENWQI*AHDYTGLV 341
Query: 182 VECPQYFFVRVPWT*EESQPAEKNLSSWKFVIPGKHSVVWTS 307
V+C Q FF+ + E+S A+K LS+ K V+P KH++VW S
Sbjct: 340 VKCTQKFFIWITRAQEQS*AAQK*LSTSKLVVPAKHAIVWPS 215
Score = 40.9 bits (83), Expect(2) = 3e-025
Identities = 17/71 (23%), Positives = 37/71 (52%)
Frame = +2 / -1
Query: 311 PVCSSVLRHSRGCGDGEVRVVPRGEVHPRTAPHELVPVAGGVVEDGLVRSVGAVSPTLQP 490
P C+S+L +R C ++ ++ + P + P++ +PV ++E+G + VS L P
Sbjct: 214 PKCTSMLG*ARHCSKLKIGIISSCII*PSSTPNKFIPVTS*IIENGGF*ATCTVSTPLVP 35
Query: 491 AELVQGLGALD 523
+ + G ++
Sbjct: 34 CKFKESFGTMN 2
>gb|BU836626.1|BU836626 T088H07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 757
Score = 209 bits (451), Expect(2) = 3e-083
Identities = 81/104 (77%), Positives = 92/104 (88%)
Frame = -2 / +2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+
Sbjct: 155 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPILTK 334
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
N TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 335 SNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 466
Score = 127 bits (273), Expect(2) = 4e-046
Identities = 61/102 (59%), Positives = 70/102 (68%)
Frame = +3 / -2
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V L+ + G+YEHM + VWL
Sbjct: 465 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLDFVRIGRYEHMIILVWL 286
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 285 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 160
Score = 119 bits (255), Expect(2) = 3e-083
Identities = 42/55 (76%), Positives = 49/55 (89%)
Frame = -2 / +2
Query: 469 SPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
S GS+ AIFYNSTSYWDEF+WGGAW+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 2 SAGGSEAAIFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGG 166
Score = 93.6 bits (198), Expect(2) = 3e-023
Identities = 47/102 (46%), Positives = 62/102 (60%)
Frame = +2 / -1
Query: 2 PPRRVSRFKIVAV*RSKESCVDSVLKRLRPSMVELY*SSFGEVE*IEYR*IRAHDVVGLV 181
P R +S FKI+ * E +D +LK LRPSMV L +SF + E I AHD GLV
Sbjct: 466 PSRCISSFKIITK*GC*EGSIDDILKGLRPSMV*LDQASFCSIRLCENWQI*AHDYTGLV 287
Query: 182 VECPQYFFVRVPWT*EESQPAEKNLSSWKFVIPGKHSVVWTS 307
V+C Q FF+ + E+S A+K LS+ K V+P KH++VW S
Sbjct: 286 VKCTQNFFIWITRAQEQS*AAQK*LSTSKLVVPAKHAIVWPS 161
Score = 77.1 bits (162), Expect(2) = 4e-046
Identities = 38/55 (69%), Positives = 40/55 (72%)
Frame = +3 / -2
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGL 470
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*KMA S+P L
Sbjct: 165 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KMAASEPPAL 1
Score = 34.5 bits (69), Expect(2) = 3e-023
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2 / -1
Query: 311 PVCSSVLRHSRGCGDGEVRVVPRGEVHPRTAPHELVPVAGGVVEDG 448
P C+S+L +R C ++ ++ + P + P++ +PV ++E+G
Sbjct: 160 PKCTSMLG*ARHCSKLKIGIISSCII*PSSTPNKFIPVTS*IIENG 23
>gb|BU896208.1|BU896208 X037C05 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 549
Score = 204 bits (440), Expect(2) = 3e-081
Identities = 80/116 (68%), Positives = 89/116 (76%)
Frame = -2 / +2
Query: 652 EXIDYXXXXXECHSCSDLAXXXXAXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGR 473
E IDY EC SCSDLA A ASIVFKD+K YS KLV GAK L+KF R QRGR
Sbjct: 35 EDIDYDRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGR 214
Query: 472 YSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
YS GS+ AIFYNSTSYWDEF+WGGAW+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 215 YSAGGSEAAIFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGG 382
Score = 117 bits (251), Expect(2) = 3e-081
Identities = 44/58 (75%), Positives = 52/58 (89%)
Frame = -2 / +2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVF 140
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 371 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIF 544
Score = 100 bits (212), Expect(3) = 6e-037
Identities = 49/71 (69%), Positives = 51/71 (71%)
Frame = +3 / -1
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGLYRPRC 485
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*KMA S+P LY PR
Sbjct: 381 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KMAASEPPALYLPRW 202
Query: 486 SLPNLYRALAP 518
SL NL R LAP
Sbjct: 201 SLANLKRVLAP 169
Score = 61.1 bits (127), Expect(3) = 6e-037
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +2 / -3
Query: 158 AHDVVGLVVECPQYFFVRVPWT*EESQPAEKNLSSWKFVIPGKHSVVWTS 307
AHD GLVV+C Q FF+ + E+S A+K LS+ K V+P KH++VW S
Sbjct: 526 AHDYTGLVVKCTQNFFIWITRAQEQS*AAQK*LSTSKLVVPAKHAIVWPS 377
Score = 31.3 bits (62), Expect(3) = 6e-037
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3 / -1
Query: 558 TMEAXXXXAXXXXARSEQEWHSXXXXX*SMXS 653
T++A A ARSEQE HS *SM S
Sbjct: 129 TIDAEAKAAAISAARSEQELHSVTGLS*SMSS 34
>gb|CK115022.1|CK115022 Y002F04 Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y002F04 5', mRNA sequence
Length = 568
Score = 215 bits (465), Expect(2) = 4e-071
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = -2 / +3
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 96 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 275
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 276 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 407
Score = 130 bits (278), Expect(2) = 2e-038
Identities = 62/102 (60%), Positives = 70/102 (68%)
Frame = +3 / -1
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 406 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 227
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 226 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 101
Score = 72.5 bits (152), Expect(2) = 4e-071
Identities = 25/33 (75%), Positives = 30/33 (90%)
Frame = -2 / +3
Query: 403 GGAWMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
GGAW+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 9 GGAWLYYATGNNSYLQLATMPGLAKHAGAFWGG 107
Score = 48.7 bits (100), Expect(2) = 2e-038
Identities = 22/33 (66%), Positives = 23/33 (69%)
Frame = +3 / -1
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPP 404
P Q APAC A PG VA+ R ELFPVA Y APP
Sbjct: 106 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPP 8
>gb|CK107894.1|CK107894 G058P86 Populus tension wood cDNA library Populus tremula x Populus
tremuloides cDNA clone G058P86 5', mRNA sequence
Length = 523
Score = 215 bits (465), Expect(2) = 7e-069
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = -2 / +1
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 79 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 258
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 259 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 390
Score = 130 bits (278), Expect(2) = 4e-036
Identities = 62/102 (60%), Positives = 70/102 (68%)
Frame = +3 / -3
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 389 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 210
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 209 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 84
Score = 65.2 bits (136), Expect(2) = 7e-069
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = -2 / +1
Query: 394 WMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
W+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 1 WLYYATGNNSYLQLATMPGLAKHAGAFWGG 90
Score = 41.4 bits (84), Expect(2) = 4e-036
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +3 / -3
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKY 389
P Q APAC A PG VA+ R ELFPVA Y
Sbjct: 89 PPQNAPACLAKPGIVAS*R*ELFPVA*Y 6
>gb|BI127343.1|BI127343 G058P86Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 455
Score = 215 bits (465), Expect(2) = 7e-069
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = -2 / +1
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 79 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 258
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 259 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 390
Score = 130 bits (278), Expect(2) = 4e-036
Identities = 62/102 (60%), Positives = 70/102 (68%)
Frame = +3 / -1
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 389 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 210
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 209 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 84
Score = 65.2 bits (136), Expect(2) = 7e-069
Identities = 22/30 (73%), Positives = 27/30 (90%)
Frame = -2 / +1
Query: 394 WMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
W+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 1 WLYYATGNNSYLQLATMPGLAKHAGAFWGG 90
Score = 41.4 bits (84), Expect(2) = 4e-036
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +3 / -1
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKY 389
P Q APAC A PG VA+ R ELFPVA Y
Sbjct: 89 PPQNAPACLAKPGIVAS*R*ELFPVA*Y 6
>gb|BI131594.1|BI131594 G123P05Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 436
Score = 213 bits (460), Expect(2) = 1e-066
Identities = 82/104 (78%), Positives = 94/104 (90%)
Frame = -2 / +2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 98 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 277
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+L+HGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 278 FNRTKGGLIELSHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 409
Score = 132 bits (282), Expect(2) = 1e-036
Identities = 63/102 (61%), Positives = 71/102 (69%)
Frame = +3 / -2
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPWL+ I PP V LN + G+YEHM + VWL
Sbjct: 408 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWLNSIKPPFVLLNFVKIGRYEHMIILVWL 229
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 228 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 103
Score = 59.7 bits (124), Expect(2) = 1e-066
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = -2 / +2
Query: 391 MYFATGNNSYLTVATAPGMAKHAGAYWFG 305
+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 23 VYYATGNNSYLQLATMPGLAKHAGAFWGG 109
Score = 41.4 bits (84), Expect(2) = 1e-036
Identities = 19/28 (67%), Positives = 20/28 (71%)
Frame = +3 / -2
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKY 389
P Q APAC A PG VA+ R ELFPVA Y
Sbjct: 108 PPQNAPACLAKPGIVAS*R*ELFPVA*Y 25
>gb|CV256150.1|CV256150 WS0243.B21_B03 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_B03 3', mRNA sequence
Length = 500
Score = 204 bits (441), Expect(2) = 7e-066
Identities = 80/116 (68%), Positives = 90/116 (77%)
Frame = -2 / -2
Query: 652 EXIDYXXXXXECHSCSDLAXXXXAXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGR 473
E IDY EC SCSDLA A ASIVFKD+K YS KLV GAK L+KF R QRGR
Sbjct: 457 EDIDYVRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGR 278
Query: 472 YSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
YS +GS+ AIFYNSTSYWDEF+WGGAW+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 277 YSASGSEAAIFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATMPGLAKHAGAFWGG 110
Score = 103 bits (219), Expect(3) = 1e-031
Identities = 50/71 (70%), Positives = 52/71 (73%)
Frame = +3 / +3
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGLYRPRC 485
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*KMA S+PL LY PR
Sbjct: 111 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KMAASEPLALYLPRW 290
Query: 486 SLPNLYRALAP 518
SL NL R LAP
Sbjct: 291 SLANLKRVLAP 323
Score = 66.1 bits (138), Expect(2) = 7e-066
Identities = 25/35 (71%), Positives = 31/35 (88%)
Frame = -2 / -2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYP 209
++G P+YGV +WD+KL GAQ+LLSRLRLFLS GYP
Sbjct: 121 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSHGYP 17
Score = 40.0 bits (81), Expect(3) = 1e-031
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2 / +2
Query: 197 YFFVRVPWT*EESQPAEKNLSSWKFVIPGKHSVVWTS 307
+FF + E+S A+K LS+ K V+P KH++VW S
Sbjct: 5 FFFFWITMAQEQS*AAQK*LSTSKLVVPAKHTIVWPS 115
Score = 31.3 bits (62), Expect(3) = 1e-031
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3 / +3
Query: 558 TMEAXXXXAXXXXARSEQEWHSXXXXX*SMXS 653
T++A A ARSEQE HS *SM S
Sbjct: 363 TIDAEAKAAAISAARSEQELHSVTGLT*SMSS 458
>gb|CX175703.1|CX175703 C06_69-40_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 679
Score = 215 bits (465), Expect(2) = 2e-060
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = -2 / +2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 47 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 226
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 227 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 358
Score = 132 bits (283), Expect(2) = 7e-033
Identities = 63/102 (61%), Positives = 71/102 (69%)
Frame = +3 / -2
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 357 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 178
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVLSISS G PG +*AP SL SQ++TP* G P
Sbjct: 177 *NVLSISSYG*PGLKNNLRRLRSS*APASLLSQLSTP*SGPP 52
Score = 37.3 bits (75), Expect(2) = 2e-060
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -2 / +2
Query: 361 LTVATAPGMAKHAGAYWFG 305
L +AT PG+AKHAGA+W G
Sbjct: 2 LQLATMPGLAKHAGAFWGG 58
Score = 28.1 bits (55), Expect(2) = 7e-033
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +3 / -2
Query: 306 PNQYAPACFAIPGAVATVR 362
P Q APAC A PG VA+ R
Sbjct: 57 PPQNAPACLAKPGIVAS*R 1
>gb|CK107886.1|CK107886 G058P78 Populus tension wood cDNA library Populus tremula x Populus
tremuloides cDNA clone G058P78 5', mRNA sequence
Length = 515
Score = 215 bits (465), Expect = 2e-055
Identities = 83/104 (79%), Positives = 94/104 (90%)
Frame = -2 / +1
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNS 134
++G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F
Sbjct: 1 FWGGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTK 180
Query: 133 FNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 181 FNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 312
Score = 130 bits (278), Expect = 1e-029
Identities = 62/102 (60%), Positives = 70/102 (68%)
Frame = +3 / -1
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 311 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 132
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FGLP 308
NVL ISS G PG +*AP SL SQ++TP* G P
Sbjct: 131 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SGPP 6
>gb|BI127335.1|BI127335 G058P78Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 537
Score = 215 bits (463), Expect = 3e-055
Identities = 83/102 (81%), Positives = 92/102 (90%)
Frame = -2 / +1
Query: 307 GSPNYGVFTWDDKLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFN 128
G P+YGV +WD+KL GAQ+LLSRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F FN
Sbjct: 1 GGPDYGVLSWDNKLAGAQLLLSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTKFN 180
Query: 127 FTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 181 RTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 306
Score = 128 bits (274), Expect = 4e-029
Identities = 61/100 (61%), Positives = 69/100 (69%)
Frame = +3 / -2
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 305 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 126
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSLSSQVNTP*FG 302
NVL ISS G PG +*AP SL SQ++TP* G
Sbjct: 125 *NVLRISSYG*PGLKNNLRRLKSS*APASLLSQLSTP*SG 6
>gb|BU828319.1|BU828319 K020P84P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 603
Score = 148 bits (317), Expect(3) = 8e-054
Identities = 54/71 (76%), Positives = 62/71 (87%)
Frame = -2 / +2
Query: 517 GAKALYKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSYLTVATAPG 338
GAK L+KF R QRGRYS GS+ AIFYNSTSYWDEF+WGGAW+Y+ATGNNSYL +AT PG
Sbjct: 332 GAKTLFKFARDQRGRYSAGGSEAAIFYNSTSYWDEFIWGGAWLYYATGNNSYLQLATMPG 511
Query: 337 MAKHAGAYWFG 305
+AKHAGA+W G
Sbjct: 512 LAKHAGAFWGG 544
Score = 100 bits (212), Expect(3) = 2e-028
Identities = 49/71 (69%), Positives = 51/71 (71%)
Frame = +3 / -1
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGLYRPRC 485
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*KMA S+P LY PR
Sbjct: 543 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KMAASEPPALYLPRW 364
Query: 486 SLPNLYRALAP 518
SL NL R LAP
Sbjct: 363 SLANLKRVLAP 331
Score = 59.7 bits (124), Expect(3) = 8e-054
Identities = 26/44 (59%), Positives = 27/44 (61%)
Frame = -2 / +3
Query: 652 EXIDYXXXXXECHSCSDLAXXXXAXXXXASIVFKDSKTYSDKLV 521
E IDY EC SCSDLA A ASIVFKD+K YS KLV
Sbjct: 198 EDIDYDRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLV 329
Score = 41.4 bits (84), Expect(3) = 8e-054
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = -2 / +2
Query: 313 WFGSPNYGVFTWDDKLPGAQVLL 245
++G P+YGV +WD+KL GAQ+LL
Sbjct: 533 FWGGPDYGVLSWDNKLAGAQLLL 601
Score = 31.8 bits (63), Expect(3) = 2e-028
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +2 / -3
Query: 245 EKNLSSWKFVIPGKHSVVWTS 307
+K LS+ K V+P KH++VW S
Sbjct: 601 QK*LSTSKLVVPAKHAIVWPS 539
Score = 31.3 bits (62), Expect(3) = 2e-028
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3 / -3
Query: 558 TMEAXXXXAXXXXARSEQEWHSXXXXX*SMXS 653
T++A A ARSEQE HS *SM S
Sbjct: 292 TIDAEAKAAAISAARSEQELHSVTGLS*SMSS 197
>gb|BI130933.1|BI130933 G112P89Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 361
Score = 177 bits (382), Expect(2) = 7e-053
Identities = 68/93 (73%), Positives = 77/93 (82%)
Frame = -2 / +1
Query: 583 AXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVW 404
A ASIVFKD+K YS KLV GAK L+KF R QRGRYS GS+ AIFYNSTSYWDEF+W
Sbjct: 13 AALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGRYSAGGSEAAIFYNSTSYWDEFIW 192
Query: 403 GGAWMYFATGNNSYLTVATAPGMAKHAGAYWFG 305
GGAW+Y+ATGNNSYL +AT PG+AKHAGA+W G
Sbjct: 193 GGAWLYYATGNNSYLQLATMPGLAKHAGAFWGG 291
Score = 100 bits (212), Expect(2) = 8e-026
Identities = 49/71 (69%), Positives = 51/71 (71%)
Frame = +3 / -3
Query: 306 PNQYAPACFAIPGAVATVRYELFPVAKYIHAPPHTNSSQ*LVEL*KMAWSDPLGLYRPRC 485
P Q APAC A PG VA+ R ELFPVA Y APP NSSQ*LVEL*KMA S+P LY PR
Sbjct: 290 PPQNAPACLAKPGIVAS*R*ELFPVA*YSQAPPQINSSQ*LVEL*KMAASEPPALYLPRW 111
Query: 486 SLPNLYRALAP 518
SL NL R LAP
Sbjct: 110 SLANLKRVLAP 78
Score = 49.6 bits (102), Expect(2) = 7e-053
Identities = 18/27 (66%), Positives = 24/27 (88%)
Frame = -2 / +1
Query: 313 WFGSPNYGVFTWDDKLPGAQVLLSRLR 233
++G P+YGV +WD+KL GAQ+LLSRLR
Sbjct: 280 FWGGPDYGVLSWDNKLAGAQLLLSRLR 360
Score = 36.8 bits (74), Expect(2) = 8e-026
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +2 / -2
Query: 239 PAEKNLSSWKFVIPGKHSVVWTS 307
PA+K LS+ K V+P KH++VW S
Sbjct: 354 PAQK*LSTSKLVVPAKHAIVWPS 286
>gb|BI128862.1|BI128862 G082P55Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 428
Score = 190 bits (410), Expect = 6e-048
Identities = 75/90 (83%), Positives = 82/90 (91%)
Frame = -2 / +2
Query: 271 KLPGAQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHG 92
KL GAQ+L+SRLRLFLSPGYPYEEIL TFHNQT +MCSYLP+F FN TKGGLI+LNHG
Sbjct: 2 KLAGAQLLVSRLRLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTKFNRTKGGLIELNHG 181
Query: 91 RPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
RPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 182 RPQPLQYVVNAAFLATLFSDYLEAADTPGW 271
Score = 116 bits (249), Expect = 1e-025
Identities = 55/90 (61%), Positives = 61/90 (67%)
Frame = +3 / -3
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 270 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 91
Query: 183 WNVLSISS*GYPGXXXXXXXXXXT*APGSL 272
NVL ISS G PG +*AP SL
Sbjct: 90 *NVLRISSYG*PGLKNNLRRLTSS*APASL 1
>gb|CA927064.1|CA927064 MTU6CR.P4.E04 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 254
Score = 181 bits (390), Expect = 4e-045
Identities = 72/84 (85%), Positives = 78/84 (92%)
Frame = -2 / +2
Query: 256 QVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGRPQPL 77
Q+LLSRLRLFLSPGYPYEEILRTFHNQT +MCSYLP+F FN TKGGLI+LNHGRPQPL
Sbjct: 2 QLLLSRLRLFLSPGYPYEEILRTFHNQTSIIMCSYLPIFTKFNRTKGGLIELNHGRPQPL 181
Query: 76 QYAVNAAFLASLYSDYLEAADTPG 5
QY VNAAFLA+L+SDYLEAADTPG
Sbjct: 182 QYVVNAAFLATLFSDYLEAADTPG 253
Score = 109 bits (233), Expect = 2e-023
Identities = 50/72 (69%), Positives = 55/72 (76%)
Frame = +3 / -3
Query: 6 PGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWLW 185
PGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 252 PGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL* 73
Query: 186 NVLSISS*GYPG 221
NVLSISS G PG
Sbjct: 72 NVLSISSYG*PG 37
>gb|CV266155.1|CV266155 WS02029.B21_E02 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_E02 3', mRNA sequence
Length = 807
Score = 171 bits (368), Expect = 4e-042
Identities = 66/78 (84%), Positives = 71/78 (91%)
Frame = -2 / +2
Query: 235 RLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGRPQPLQYAVNAA 56
RLFLSPGYPYEEIL TFHNQT +MCSYLP+F FN TKGGLI+LNHGRPQPLQY VNAA
Sbjct: 2 RLFLSPGYPYEEILSTFHNQTSIIMCSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAA 181
Query: 55 FLASLYSDYLEAADTPGW 2
FLA+L+SDYLEAADTPGW
Sbjct: 182 FLATLFSDYLEAADTPGW 235
Score = 113 bits (241), Expect = 1e-024
Identities = 51/73 (69%), Positives = 56/73 (76%)
Frame = +3 / -1
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + ARKAALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 234 HPGVSAASR*SLNRVARKAALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 55
Query: 183 WNVLSISS*GYPG 221
NVLSISS G PG
Sbjct: 54 *NVLSISSYG*PG 16
>gb|BI128164.1|BI128164 G071P89Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 467
Score = 163 bits (351), Expect = 9e-040
Identities = 65/97 (67%), Positives = 71/97 (73%)
Frame = -2 / +2
Query: 652 EXIDYXXXXXECHSCSDLAXXXXAXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGR 473
E IDY EC SCSDLA A ASIVFKD+K YS KLV GAK L+KF R QRGR
Sbjct: 176 EDIDYDRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGR 355
Query: 472 YSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNSY 362
YS S+ AI YNSTSYWDEF+WGGAW+Y+ATGNNSY
Sbjct: 356 YSAGSSEAAICYNSTSYWDEFIWGGAWLYYATGNNSY 466
>gb|CV130556.1|CV130556 B9SP04b08 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 860
Score = 156 bits (335), Expect = 1e-037
Identities = 59/72 (81%), Positives = 65/72 (90%)
Frame = -2 / +3
Query: 217 GYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLY 38
GYPYEEIL TFHNQT +MCSYLP+F FN TKGGLI+LNHGRPQPLQY VNAA+LA+L+
Sbjct: 42 GYPYEEILSTFHNQTSIIMCSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAAYLATLF 221
Query: 37 SDYLEAADTPGW 2
SDYLEAADTPGW
Sbjct: 222 SDYLEAADTPGW 257
Score = 106 bits (226), Expect = 2e-022
Identities = 49/72 (68%), Positives = 54/72 (75%)
Frame = +3 / -2
Query: 3 HPGVSAASR*SLYKEARKAALTAY*SG*GLPWLSCINPPLVKLNELNTGKYEHMTLSVWL 182
HPGVSAASR*SL + AR AALT Y* G*GLPW + I PP V LN + G+YEHM + VWL
Sbjct: 256 HPGVSAASR*SLNRVAR*AALTTY*RG*GLPWFNSIKPPFVLLNFVKIGRYEHMIILVWL 77
Query: 183 WNVLSISS*GYP 218
NVLSISS G P
Sbjct: 76 *NVLSISSYG*P 41
>gb|BP924653.1|BP924653 BP924653 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-034_O04.f 5', mRNA sequence
Length = 553
Score = 142 bits (305), Expect = 2e-033
Identities = 58/86 (67%), Positives = 63/86 (73%)
Frame = -2 / +3
Query: 652 EXIDYXXXXXECHSCSDLAXXXXAXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGR 473
E IDY EC SCSDLA A ASIVFKD+K YS KLV GAK L+KF R QRGR
Sbjct: 294 EDIDYDRPVTECSSCSDLAAEMAAALASASIVFKDNKAYSQKLVHGAKTLFKFARDQRGR 473
Query: 472 YSPNGSDQAIFYNSTSYWDEFVWGGA 395
YS +GS+ AIFYNSTSYWDEF+WGGA
Sbjct: 474 YSASGSEAAIFYNSTSYWDEFIWGGA 551
>gb|DT516843.1|DT516843 WS02432.B21_J05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02432_J05 3', mRNA sequence
Length = 898
Score = 138 bits (296), Expect = 3e-032
Identities = 54/86 (62%), Positives = 68/86 (79%)
Frame = -2 / -2
Query: 259 AQVLLSRLRLFLSPGYPYEEILRTFHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGRPQP 80
A +LL+R R+FL+PG+PYEE+L +HN+T+ MCSYL FN FN+TKGG+IQL+ GRPQP
Sbjct: 894 AMLLLTRCRIFLNPGHPYEEMLHMYHNKTELNMCSYLQQFNVFNWTKGGMIQLSSGRPQP 715
Query: 79 LQYAVNAAFLASLYSDYLEAADTPGW 2
LQY N AFLASL+ DYL A PG+
Sbjct: 714 LQYVANTAFLASLFVDYLNATRVPGF 637
>gb|BU821516.1|BU821516 UB24CPB10 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 449
Score = 135 bits (289), Expect = 3e-031
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = -2 / +1
Query: 187 FHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTP 8
FHNQT +MCSYLP+F FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTP
Sbjct: 4 FHNQTSIIMCSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTP 183
Query: 7 GW 2
GW
Sbjct: 184 GW 189
>gb|CA933005.1|CA933005 MTU5CS.P2.C06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 185
Score = 130 bits (278), Expect = 1e-029
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = -2 / +2
Query: 187 FHNQTDNVMCSYLPVFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTP 8
FHNQT +MCSYLP+F FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTP
Sbjct: 2 FHNQTSIIMCSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTP 181
Query: 7 G 5
G
Sbjct: 182 G 184
>gb|DN496569.1|DN496569 P078B11.5pR Populus petioles cDNA library Populus tremula cDNA
clone P078B11 5', mRNA sequence
Length = 830
Score = 122 bits (262), Expect(2) = 6e-029
Identities = 46/55 (83%), Positives = 51/55 (92%)
Frame = -2 / +3
Query: 166 VMCSYLPVFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
+MCSYLP+F FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 36 IMCSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 200
Score = 24.4 bits (47), Expect(2) = 6e-029
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2 / +1
Query: 202 EILRTFHNQT 173
EIL TFHNQT
Sbjct: 1 EILSTFHNQT 30
>gb|CF236393.1|CF236393 PtaJXT2C3C0305 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 657
Score = 126 bits (269), Expect = 2e-028
Identities = 48/59 (81%), Positives = 53/59 (89%)
Frame = -2 / +3
Query: 178 QTDNVMCSYLPVFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
QT +MCSYLP+F FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 3 QTSIIMCSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 179
>gb|DT510953.1|DT510953 WS02429.BR_C15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_C15 5', mRNA sequence
Length = 872
Score = 90.0 bits (190), Expect(3) = 4e-027
Identities = 36/87 (41%), Positives = 50/87 (57%)
Frame = -2 / +3
Query: 607 SDLAXXXXAXXXXASIVFKDSKTYSDKLVKGAKALYKFGRLQRGRYSPNGSDQAIFYNST 428
+++A A AS+VFK YS L+K AK L+ F RG YS + + + +YNST
Sbjct: 42 TEVAAETAAALASASLVFKSDSRYSSALLKHAKELFTFADKYRGSYSESIPEVSTYYNST 221
Query: 427 SYWDEFVWGGAWMYFATGNNSYLTVAT 347
Y DE +W +W+Y ATG+ SYL T
Sbjct: 222 GYGDELLWAASWLYHATGDKSYLQYVT 302
Score = 36.8 bits (74), Expect(3) = 4e-027
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = -2 / +3
Query: 286 FTWDDKLPGAQVLLSRLRLF 227
F+WD+KL G QVLLSRL F
Sbjct: 348 FSWDNKLAGTQVLLSRLTFF 407
Score = 35.4 bits (71), Expect(3) = 4e-027
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = -2 / +3
Query: 79 LQYAVNAAFLASLYSDYLEAADT 11
LQ+ V +AFLASLYSDY+ ++ T
Sbjct: 552 LQHPVASAFLASLYSDYMRSSGT 620
>gb|BI130837.1|BI130837 G111P47Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 492
Score = 119 bits (254), Expect = 2e-026
Identities = 45/53 (84%), Positives = 49/53 (92%)
Frame = -2 / +2
Query: 160 CSYLPVFNSFNFTKGGLIQLNHGRPQPLQYAVNAAFLASLYSDYLEAADTPGW 2
CSYLP+F FN TKGGLI+LNHGRPQPLQY VNAAFLA+L+SDYLEAADTPGW
Sbjct: 2 CSYLPIFTKFNRTKGGLIELNHGRPQPLQYVVNAAFLATLFSDYLEAADTPGW 160
>gb|BU897184.1|BU897184 X052G04 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 200
Score = 100 bits (214), Expect = 7e-021
Identities = 42/66 (63%), Positives = 47/66 (71%)
Frame = -2 / +2
Query: 544 KTYSDKLVKGAKALYKFGRLQRGRYSPNGSDQAIFYNSTSYWDEFVWGGAWMYFATGNNS 365
K YS KLV GAK L+KF R RG YS S+ AI YN TSYWDEF+ GGA +Y+ATGNN
Sbjct: 2 KAYSHKLVHGAKTLFKFARDHRGTYSACSSEAAISYNLTSYWDEFICGGARLYYATGNNP 181
Query: 364 YLTVAT 347
YL AT
Sbjct: 182 YLQFAT 199
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 280,820,624
Number of Sequences: 369679
Number of extensions: 3626071
Number of successful extensions: 32456
Number of sequences better than 1.0e-020: 33
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8598585660
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)