TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= QAE20c02.yg.2.1
(696 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library... 260 5e-069
gb|CN519340.1|CN519340 GQ0102.B3_M07 GQ010 Populus trichoca... 248 2e-065
gb|CF230144.1|CF230144 PtaC0004D11E0909 Poplar cDNA library... 181 2e-060
gb|CN519836.1|CN519836 GQ0105.B3_D21 GQ010 Populus trichoca... 180 3e-051
gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated wit... 200 8e-051
gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Po... 188 2e-047
gb|BU896443.1|BU896443 X040G03 Populus wood cDNA library Po... 150 3e-045
gb|CX169141.1|CX169141 C08_69-94_06.ab1 leaf inoculated wit... 100 4e-045
gb|CX658670.1|CX658670 PO01020G08 Poplar SC cDNA library Po... 148 1e-042
gb|CX659990.1|CX659990 PO01016F08 Poplar SC cDNA library Po... 148 1e-042
gb|CX654964.1|CX654964 PO01003C04 Poplar SC cDNA library Po... 148 1e-042
gb|CX657957.1|CX657957 PO01007D11 Poplar SC cDNA library Po... 148 1e-042
gb|CX654585.1|CX654585 PO02016G03 Poplar SC cDNA library Po... 144 1e-042
gb|BU880689.1|BU880689 UM53TC06 Populus flower cDNA library... 161 3e-039
gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid lib... 154 1e-038
gb|CX653687.1|CX653687 PO02005E10 Poplar SC cDNA library Po... 133 4e-037
gb|CX658849.1|CX658849 PO01023B01 Poplar SC cDNA library Po... 126 4e-036
gb|AI162064.1|AI162064 A011P60U Hybrid aspen plasmid librar... 131 3e-033
gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Popu... 140 1e-032
gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA li... 122 6e-031
gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDN... 122 7e-031
gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Po... 108 2e-030
gb|BU897065.1|BU897065 X050E06 Populus wood cDNA library Po... 104 4e-030
gb|CX657290.1|CX657290 PO02039B10 Poplar SC cDNA library Po... 101 8e-029
gb|CK097994.1|CK097994 A001P37.5pR Hybrid aspen plasmid lib... 126 1e-028
gb|DT476275.1|DT476275 WS01228.B21_P13 PT-GT-FL-A-3 Populus... 84 7e-027
gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library... 118 4e-026
gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA librar... 97 1e-024
gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Popul... 111 3e-024
gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Popu... 111 3e-024
gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus... 111 7e-024
gb|DT473223.1|DT473223 WS01228.BR_P13 PT-GT-FL-A-3 Populus ... 57 7e-024
gb|DT509401.1|DT509401 WS02423.BR_K04 PTxD-ICC-N-A-14 Popul... 110 1e-023
gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated wit... 75 3e-021
gb|AI161473.1|AI161473 A001P37U Hybrid aspen plasmid librar... 74 5e-021
>gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 591
Score = 260 bits (563), Expect = 5e-069
Identities = 102/175 (58%), Positives = 129/175 (73%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+S+TEPYIV H+++LSHA AV RYR KYQ QKG++GI+LDF +YEP T+S D AAQR
Sbjct: 17 DSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGILLDFVYYEPLTSSKADNLAAQR 196
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
ARDFHIGWF+ P++ G+YPK MQ+IV +RLP FT E+ K+VKGS D+ GINQYTT+Y+ D
Sbjct: 197 ARDFHIGWFIHPIVYGEYPKTMQNIVGNRLPQFTKEEVKMVKGSMDFVGINQYTTFYMYD 376
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
P Y DW V + +++NGV IG A S WLY VP GMY V Y+KE+Y
Sbjct: 377 PHQPKPKYLGYQQDWNVGFAYKKNGVPIGPRATSNWLYNVPWGMYKAVMYIKERY 541
Score = 104 bits (221), Expect(2) = 1e-027
Identities = 62/119 (52%), Positives = 73/119 (61%)
Frame = +3 / -1
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VVY L+P S EP T L S V GS T+ CI+FGY P+ G N P+ KSLA
Sbjct: 375 SYM*KVVYWLMPTKSIEPFTILTSSFVNWGSLFPTIFCIVFGYSPYTIGWINHPM*KSLA 196
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDE 539
L AA S+ E V+GS KS+ IP LPF + Y RYL TA A*D+ * T+*GSV E
Sbjct: 195 L*AAKLSAFELVRGS**TKSKRIPILPFCFS*YFSRYL*TAAA*DKIK**ATI*GSVAE 19
Score = 39.1 bits (79), Expect(2) = 1e-027
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3 / -1
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTPF 113
SF T Y+P GT+*SQ+E A+ PI TPF
Sbjct: 534 SFMYITALYIPHGTL*SQLEVALGPIGTPF 445
>gb|CN519340.1|CN519340 GQ0102.B3_M07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_M07 5', mRNA sequence
Length = 620
Score = 248 bits (537), Expect = 2e-065
Identities = 99/175 (56%), Positives = 127/175 (72%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
+S+TEPYIV H+++LSHA AV RYR KYQ QKG++GI+LDF +YEP T+S D AAQR
Sbjct: 55 DSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGILLDFVYYEPLTSSKADNLAAQR 234
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
ARDFHIGWF+ P++ G+YPK MQ+IV +RLP FT E+ K+VKGS D+ GINQYTT+Y+ D
Sbjct: 235 ARDFHIGWFIHPIVYGEYPKTMQNIVGNRLPQFTKEEVKMVKGSMDFVGINQYTTFYMYD 414
Query: 181 QQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
P Y V + +++NGV IG A+S WLY V GMY V Y+KE+Y
Sbjct: 415 PHQPKPKYLGYQQXXNVGFAYKKNGVPIGPRANSNWLYNVXWGMYXXVMYIKERY 579
Score = 104 bits (221), Expect(2) = 9e-027
Identities = 62/119 (52%), Positives = 73/119 (61%)
Frame = +3 / -1
Query: 183 SAM*YVVY*LIPK*SDEPLTSLACSGVKLGSRSFTMSCIIFGYCPFINGSRNQPIWKSLA 362
S M* VVY L+P S EP T L S V GS T+ CI+FGY P+ G N P+ KSLA
Sbjct: 413 SYM*KVVYWLMPTKSIEPFTILTSSFVNWGSLFPTIFCIVFGYSPYTIGWINHPM*KSLA 234
Query: 363 LCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRYLATAVA*DRRML*TTM*GSVDE 539
L AA S+ E V+GS KS+ IP LPF + Y RYL TA A*D+ * T+*GSV E
Sbjct: 233 L*AAKLSAFELVRGS**TKSKRIPILPFCFS*YFSRYL*TAAA*DKIK**ATI*GSVAE 57
Score = 35.9 bits (72), Expect(2) = 9e-027
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +3 / -1
Query: 24 SFR*FTTPYMPDGTM*SQIECAICPICTPF 113
SF T Y+P T+*SQ+E A+ PI TPF
Sbjct: 572 SFMYITXXYIPHXTL*SQLEFALGPIGTPF 483
>gb|CF230144.1|CF230144 PtaC0004D11E0909 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 181 bits (389), Expect(3) = 2e-060
Identities = 73/117 (62%), Positives = 88/117 (75%)
Frame = -3 / +1
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+ EPYIV HN+LLSH TA YR KY+A Q+G VGI LD W+EP TNST+D +AAQR
Sbjct: 154 NSAAEPYIVAHNMLLSHGTAADIYRKKYEAKQQGSVGISLDVIWFEPATNSTKDIEAAQR 333
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
A+DF +GWF++PLI G YP M++ V DRLP FT A LVKGS D+ GIN YTT+Y
Sbjct: 334 AQDFQLGWFIEPLILGDYPISMRNRVGDRLPKFTENDAALVKGSLDFVGINHYTTFY 504
Score = 45.5 bits (93), Expect(3) = 2e-060
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = -3 / +1
Query: 121 FQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEK 20
F N IG A+SIWLY+VP GM ++N++++K
Sbjct: 592 FGENKKPIGDRANSIWLYVVPQGMRSLMNHIRQK 693
Score = 45.1 bits (92), Expect(3) = 2e-060
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -3 / +1
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+T RVK W EP VA GYD GL P C+
Sbjct: 1 FADTCFQTYGDRVKNWITFNEPHTVAIQGYDVGLQAPGRCS 123
>gb|CN519836.1|CN519836 GQ0105.B3_D21 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0105_D21 5', mRNA sequence
Length = 833
Score = 180 bits (388), Expect(2) = 3e-051
Identities = 73/117 (62%), Positives = 88/117 (75%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV HN+LLSH A YR KY+A Q+G VGI LD W+EP TNST+D +AAQR
Sbjct: 398 NSATEPYIVAHNMLLSHGAAADIYRKKYKAKQQGSVGISLDVIWFEPATNSTKDIEAAQR 577
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
A+DF +GWF++PLI G YP M++ V DRLP FT A LVKGS D+ GIN YTT+Y
Sbjct: 578 AQDFQLGWFIEPLILGDYPISMRNRVGDRLPKFTENDAALVKGSLDFVGINHYTTFY 748
Score = 41.4 bits (84), Expect(2) = 3e-051
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = -3 / +2
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+A F+ RVK W EP V+ GYD GL P C+
Sbjct: 245 FAETCFQNYGDRVKNWITFNEPHTVSIQGYDVGLQAPGRCS 367
>gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 643
Score = 200 bits (431), Expect = 8e-051
Identities = 76/143 (53%), Positives = 99/143 (69%)
Frame = -3 / +2
Query: 445 KGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPS 266
+G++GI+LDF +YEP T S D AAQRARDFH+GWF+ P++ G+YPK MQ+IV RLP
Sbjct: 23 EGRIGILLDFVYYEPLTRSKADNLAAQRARDFHVGWFIHPIVYGEYPKTMQNIVGSRLPK 202
Query: 265 FTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMA 86
FT E+ K+VKGS D+ GIN YTTYY+ D Y DW + +++ GV+IG A
Sbjct: 203 FTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGPRA 382
Query: 85 HSIWLYIVPSGMYGVVNYLKEKY 17
+S WLY VP GMY V Y+KE+Y
Sbjct: 383 NSYWLYNVPWGMYKAVMYIKERY 451
>gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 484
Score = 188 bits (406), Expect = 2e-047
Identities = 73/132 (55%), Positives = 93/132 (70%)
Frame = -3 / +2
Query: 412 WYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKG 233
+YEP T+S D AAQRARDFHIGWF+ P++ G+YPK MQ+IV +RLP FT E+ K+VKG
Sbjct: 2 YYEPLTSSKADNLAAQRARDFHIGWFIHPIVYGEYPKTMQNIVGNRLPQFTKEEVKMVKG 181
Query: 232 SSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSG 53
S D+ GINQYTT+Y+ D P Y DW V + +++NGV IG +S WLY VP G
Sbjct: 182 SMDFVGINQYTTFYMYDPHQPKPKYLGYQQDWNVGFAYKKNGVPIGPRENSNWLYNVPWG 361
Query: 52 MYGVVNYLKEKY 17
MY V Y+KE+Y
Sbjct: 362 MYKAVMYIKERY 397
>gb|BU896443.1|BU896443 X040G03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 729
Score = 150 bits (322), Expect(2) = 3e-045
Identities = 55/96 (57%), Positives = 77/96 (80%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NSSTEPYIV H++LLSHA AV Y+ KYQA+Q GK+GI L+ W+EP++NST+D AA+R
Sbjct: 68 NSSTEPYIVAHHLLLSHAAAVKTYKEKYQASQNGKIGITLNTPWFEPYSNSTDDYDAAKR 247
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPE 254
+ DF +GWFL+P+ G YP M+++VK+RLP+F+ +
Sbjct: 248 SLDFSLGWFLNPITYGDYPTSMRELVKERLPTFSSQ 355
Score = 51.5 bits (106), Expect(2) = 3e-045
Identities = 21/70 (30%), Positives = 34/70 (48%)
Frame = -3 / +2
Query: 226 DYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMY 47
D+ G+N YT YY A+ Y +D +R+G +G A + W Y+ P G+
Sbjct: 377 DFVGLNYYTAYYAANANPADPDHLRYQTDSNAIIKAKRDGNPLGPQAGATWQYVYPEGIK 556
Query: 46 GVVNYLKEKY 17
++N+ K Y
Sbjct: 557 YLLNHTKYNY 586
>gb|CX169141.1|CX169141 C08_69-94_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 617
Score = 100 bits (213), Expect(3) = 4e-045
Identities = 44/84 (52%), Positives = 53/84 (63%)
Frame = -3 / +3
Query: 391 STEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGI 212
S ED KAA R DF GWF +PL G YP+ M+ IV RLP FT E++ LVKGS D+ G+
Sbjct: 342 SEEDIKAAYRELDFLFGWFANPLTYGDYPETMKAIVGHRLPKFTKEESALVKGSIDFLGV 521
Query: 211 NQYTTYYIADQQTPPQGPPSYSSD 140
N YTT Y A+ P + SYS D
Sbjct: 522 NYYTTNYAANNPAPNKINFSYSGD 593
Score = 81.3 bits (171), Expect(3) = 4e-045
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTED 380
NS TEPY+V HN++L HA AV YR KYQA+QKGK+GI + NW+ P + +E+
Sbjct: 189 NSGTEPYMVAHNLILGHAAAVKLYREKYQASQKGKIGITIVTNWFIPKSPKSEE 350
Score = 38.2 bits (77), Expect(3) = 4e-045
Identities = 16/41 (39%), Positives = 19/41 (46%)
Frame = -3 / +3
Query: 682 YAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
YA FKT RVK W EP + GY+ G P C+
Sbjct: 39 YAEFCFKTFGDRVKHWCTFNEPYSFSNNGYNGGTFAPGRCS 161
>gb|CX658670.1|CX658670 PO01020G08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01020G08 5', mRNA sequence
Length = 709
Score = 148 bits (317), Expect(2) = 1e-042
Identities = 56/117 (47%), Positives = 79/117 (67%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+ EPY+ HN++LSH AV Y++KYQA Q+G++GI + +W+ P N+T D+ A R
Sbjct: 59 NSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGITIVSHWFLPKFNTTADRIAVSR 238
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
A DF GWF P+ G YP M+ +V +RLP FT EQ+ ++KGS D+ G+N YT Y
Sbjct: 239 ALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSLDFLGLNYYTANY 409
Score = 45.1 bits (92), Expect(2) = 1e-042
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3 / +2
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY+ D V ++NGV IG WLY+ P G+ V+ Y+K+ Y
Sbjct: 449 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNY 586
>gb|CX659990.1|CX659990 PO01016F08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01016F08 5', mRNA sequence
Length = 653
Score = 148 bits (317), Expect(2) = 1e-042
Identities = 56/117 (47%), Positives = 79/117 (67%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+ EPY+ HN++LSH AV Y++KYQA Q+G++GI + +W+ P N+T D+ A R
Sbjct: 59 NSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGITIVSHWFLPKFNTTADRIAVSR 238
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
A DF GWF P+ G YP M+ +V +RLP FT EQ+ ++KGS D+ G+N YT Y
Sbjct: 239 ALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSLDFLGLNYYTANY 409
Score = 45.1 bits (92), Expect(2) = 1e-042
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3 / +2
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY+ D V ++NGV IG WLY+ P G+ V+ Y+K+ Y
Sbjct: 449 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNY 586
>gb|CX654964.1|CX654964 PO01003C04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01003C04 5', mRNA sequence
Length = 638
Score = 148 bits (317), Expect(2) = 1e-042
Identities = 56/117 (47%), Positives = 79/117 (67%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+ EPY+ HN++LSH AV Y++KYQA Q+G++GI + +W+ P N+T D+ A R
Sbjct: 59 NSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGITIVSHWFLPKFNTTADRIAVSR 238
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
A DF GWF P+ G YP M+ +V +RLP FT EQ+ ++KGS D+ G+N YT Y
Sbjct: 239 ALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSLDFLGLNYYTANY 409
Score = 45.1 bits (92), Expect(2) = 1e-042
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3 / +2
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY+ D V ++NGV IG WLY+ P G+ V+ Y+K+ Y
Sbjct: 449 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNY 586
>gb|CX657957.1|CX657957 PO01007D11 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01007D11 5', mRNA sequence
Length = 638
Score = 148 bits (317), Expect(2) = 1e-042
Identities = 56/117 (47%), Positives = 79/117 (67%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+ EPY+ HN++LSH AV Y++KYQA Q+G++GI + +W+ P N+T D+ A R
Sbjct: 59 NSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGITIVSHWFLPKFNTTADRIAVSR 238
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
A DF GWF P+ G YP M+ +V +RLP FT EQ+ ++KGS D+ G+N YT Y
Sbjct: 239 ALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSLDFLGLNYYTANY 409
Score = 45.1 bits (92), Expect(2) = 1e-042
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3 / +2
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY+ D V ++NGV IG WLY+ P G+ V+ Y+K+ Y
Sbjct: 449 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNY 586
>gb|CX654585.1|CX654585 PO02016G03 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02016G03 5', mRNA sequence
Length = 476
Score = 144 bits (309), Expect(2) = 1e-042
Identities = 53/83 (63%), Positives = 67/83 (80%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+TEPYIV H+++LSHA AV RYR KYQ QKG++GI+LDF +Y+P T S D AAQR
Sbjct: 227 NSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGILLDFVYYQPLTRSKADNLAAQR 406
Query: 361 ARDFHIGWFLDPLINGQYPKIMQ 293
ARDFH+GWF+ P++ G+YPK MQ
Sbjct: 407 ARDFHVGWFIHPIVYGEYPKTMQ 475
Score = 84.5 bits (178), Expect(2) = 1e-021
Identities = 44/83 (53%), Positives = 53/83 (63%)
Frame = +3 / -3
Query: 294 CIIFGYCPFINGSRNQPIWKSLALCAAF*SSVEFVKGSYQLKSRTIPTLPF*VAWYLLRY 473
CI+FGY P+ G N P WKSLAL AA S+ + V+G KS+ IP LPF + Y RY
Sbjct: 474 CIVFGYSPYTIGWINHPTWKSLAL*AAKLSAFDLVRGW**TKSKRIPILPFCFS*YFSRY 295
Query: 474 LATAVA*DRRML*TTM*GSVDEF 542
L TA A*D+ * T+*GSV EF
Sbjct: 294 L*TAAA*DKIK**ATI*GSVAEF 226
Score = 48.7 bits (100), Expect(2) = 1e-042
Identities = 19/43 (44%), Positives = 22/43 (51%)
Frame = -3 / +2
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQ 557
DYA FKT RVK W R+VA GYD G P C++
Sbjct: 74 DYADFCFKTFGDRVKNWMTFNXTRVVAALGYDNGFFAPGRCSK 202
Score = 38.2 bits (77), Expect(2) = 1e-021
Identities = 21/41 (51%), Positives = 21/41 (51%)
Frame = +3 / -3
Query: 564 HXXGGXSPLS*PXNATILGSXNXXQXLTRXXXVLKXXSA*S 686
H G PLS P AT L S N Q TR VLK SA*S
Sbjct: 195 HLPGAKKPLSYPSAATTLVSLNVIQFFTRSPKVLKQKSA*S 73
>gb|BU880689.1|BU880689 UM53TC06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 570
Score = 161 bits (347), Expect = 3e-039
Identities = 65/160 (40%), Positives = 99/160 (61%)
Frame = -3 / +2
Query: 496 SHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLIN 317
+HA AV+ YRNKY+ Q G++G+VLD W E +N TED+ AA R +F +GW+L+PL
Sbjct: 2 AHAAAVSIYRNKYKDKQGGQIGLVLDCEWAETGSNKTEDKVAASRRLEFQLGWYLNPLYY 181
Query: 316 GQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDW 137
G YP++M++I+ ++LP FT E +L++ D+ G+N YT+ +I P+ Y +
Sbjct: 182 GDYPEVMREILGEQLPKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQL 361
Query: 136 GVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+ G IG+ A S WLY+ P G+ V+NYL +KY
Sbjct: 362 MERRVEFEGGEPIGEKAASEWLYVCPWGLRKVLNYLAQKY 481
>gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 3', mRNA sequence
Length = 816
Score = 154 bits (330), Expect(2) = 1e-038
Identities = 57/112 (50%), Positives = 75/112 (66%)
Frame = -3 / -2
Query: 352 FHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQT 173
FH+GWF+ P++ G+YPK MQ+IV RLP FT E+ K+VKGS D+ GIN YTTYY+ D
Sbjct: 737 FHVGWFIHPIVYGEYPKTMQNIVGSRLPKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQ 558
Query: 172 PPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
Y DW + +++ GV+IG A+S WLY VP GMY V Y+KE+Y
Sbjct: 557 SKPKNLGYQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERY 402
Score = 25.8 bits (50), Expect(2) = 1e-038
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -3 / -1
Query: 397 TNSTEDQKAAQRARDF 350
T S D AAQRARDF
Sbjct: 783 TRSKADNLAAQRARDF 736
>gb|CX653687.1|CX653687 PO02005E10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02005E10 5', mRNA sequence
Length = 523
Score = 133 bits (284), Expect(2) = 4e-037
Identities = 51/106 (48%), Positives = 72/106 (67%)
Frame = -3 / +2
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQR 362
NS+ EPY+ HN++LSH AV Y++KYQA Q+G++GI + +W+ P N+T D+ A R
Sbjct: 206 NSAVEPYVAAHNMILSHGAAVKVYKDKYQAIQRGQIGITIVSHWFLPKFNTTADRIAVSR 385
Query: 361 ARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSD 224
A DF GWF P+ G YP M+ +V +RLP FT EQ+ ++KGS D
Sbjct: 386 ALDFMFGWFARPITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSLD 523
Score = 41.8 bits (85), Expect(2) = 4e-037
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = -3 / +2
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCT 560
+YA FKT RVK W + EP +A GY+ G P C+
Sbjct: 56 EYADFCFKTFGDRVKYWITMNEPNGLAINGYNFGSFAPGRCS 181
>gb|CX658849.1|CX658849 PO01023B01 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01023B01 5', mRNA sequence
Length = 577
Score = 126 bits (270), Expect(2) = 4e-036
Identities = 49/105 (46%), Positives = 70/105 (66%)
Frame = -3 / +1
Query: 505 ILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDP 326
++LSH AV Y++KYQA Q+G++GI + +W+ P N+T D+ A RA DF GWF P
Sbjct: 1 MILSHGAAVKVYKDKYQAIQRGQIGITIVSHWFLPKFNTTADRIAVSRALDFMFGWFARP 180
Query: 325 LINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
+ G YP M+ +V +RLP FT EQ+ ++KGS D+ G+N YT Y
Sbjct: 181 ITFGDYPDSMRTLVGNRLPKFTKEQSAMLKGSLDFLGLNYYTANY 315
Score = 45.1 bits (92), Expect(2) = 4e-036
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3 / +1
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY+ D V ++NGV IG WLY+ P G+ V+ Y+K+ Y
Sbjct: 355 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNY 492
>gb|AI162064.1|AI162064 A011P60U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 471
Score = 131 bits (281), Expect(3) = 3e-033
Identities = 53/88 (60%), Positives = 64/88 (72%)
Frame = -3 / +1
Query: 445 KGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPS 266
KGK GI LD E T S D AAQRARDFHIGWF+ P++ G+YP MQ+IV +RLP
Sbjct: 55 KGKDGIXLDLFITETXTRSKXDNLAAQRARDFHIGWFIHPIVYGEYPXTMQNIVGNRLPQ 234
Query: 265 FTPEQAKLVKGSSDYFGINQYTTYYIAD 182
FT E+ K+VKGS D+ GINQYTT+Y+ D
Sbjct: 235 FTKEEVKMVKGSMDFVGINQYTTFYLYD 318
Score = 24.9 bits (48), Expect(3) = 3e-033
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -3 / +3
Query: 151 YSSDWGVQYYFQRNGVQIGQMAHSIWL 71
Y DW V + +NGV S WL
Sbjct: 351 YQQDWNVGXAY*KNGVPNXSKRKSNWL 431
Score = 23.5 bits (45), Expect(3) = 3e-033
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -3 / +2
Query: 469 RNKYQATQKGKVG 431
R KYQ QKG++G
Sbjct: 32 REKYQEKQKGRMG 70
>gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 3', mRNA sequence
Length = 910
Score = 140 bits (300), Expect = 1e-032
Identities = 56/144 (38%), Positives = 87/144 (60%)
Frame = -3 / -3
Query: 448 QKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLP 269
Q G++G+VLD W E +N TED+ AA R +F +GW+L+PL G YP++M++I+ ++LP
Sbjct: 908 QGGQIGLVLDCEWAETGSNKTEDKVAASRRLEFQLGWYLNPLYYGDYPEVMREILGEQLP 729
Query: 268 SFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQM 89
FT E +L++ D+ G+N YT+ +I P+ Y + + G IG+
Sbjct: 728 KFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQLMERRVEFEGGEPIGEK 549
Query: 88 AHSIWLYIVPSGMYGVVNYLKEKY 17
A S WLY+ P G+ V+NYL +KY
Sbjct: 548 AASEWLYVCPWGLRKVLNYLAQKY 477
>gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 745
Score = 122 bits (260), Expect(2) = 6e-031
Identities = 47/92 (51%), Positives = 64/92 (69%)
Frame = -3 / +2
Query: 448 QKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLP 269
Q G++GI LD WYEP +++ ED+ AAQRA DF IGWFLDPL G+YP M+ +V +RLP
Sbjct: 17 QGGQIGITLDSKWYEPISDAEEDKDAAQRAMDFGIGWFLDPLFLGKYPLSMKKLVGERLP 196
Query: 268 SFTPEQAKLVKGSSDYFGINQYTTYYIADQQT 173
+ +KL+ GS D+ GIN YT Y+ + +T
Sbjct: 197 EISQGMSKLLVGSLDFVGINHYTALYVRNDRT 292
Score = 34.1 bits (68), Expect(2) = 6e-031
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -3 / +3
Query: 88 AHSIWLYIVPSGMYGVVNYLKEKY 17
A S WL+IVP G++ ++ Y+K+KY
Sbjct: 471 AASRWLHIVPWGIHKLLKYVKDKY 542
>gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 5', mRNA sequence
Length = 774
Score = 122 bits (260), Expect(2) = 7e-031
Identities = 47/92 (51%), Positives = 64/92 (69%)
Frame = -3 / +2
Query: 448 QKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLP 269
Q G++GI LD WYEP +++ ED+ AAQRA DF IGWFLDPL G+YP M+ +V +RLP
Sbjct: 38 QGGQIGITLDSKWYEPISDAEEDKDAAQRAMDFGIGWFLDPLFLGKYPLSMKKLVGERLP 217
Query: 268 SFTPEQAKLVKGSSDYFGINQYTTYYIADQQT 173
+ +KL+ GS D+ GIN YT Y+ + +T
Sbjct: 218 EISQGMSKLLVGSLDFVGINHYTALYVRNDRT 313
Score = 34.1 bits (68), Expect(2) = 7e-031
Identities = 12/24 (50%), Positives = 19/24 (79%)
Frame = -3 / +3
Query: 88 AHSIWLYIVPSGMYGVVNYLKEKY 17
A S WL+IVP G++ ++ Y+K+KY
Sbjct: 492 AASRWLHIVPWGIHKLLKYVKDKY 563
>gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02042F10 5', mRNA sequence
Length = 646
Score = 108 bits (231), Expect(2) = 2e-030
Identities = 42/90 (46%), Positives = 58/90 (64%)
Frame = -3 / +1
Query: 460 YQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVK 281
YQA Q+G++GI + +W+ P N T D+ A RA DF GWF P+ G YP M+ +V
Sbjct: 1 YQAIQRGQIGITIVSHWFLPKFNKTADRIAVSRALDFMFGWFARPITFGDYPDSMRTLVG 180
Query: 280 DRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
+RLP FT EQ+ ++KGS D+ G+N YT Y
Sbjct: 181 NRLPKFTKEQSAMLKGSLDFLGLNYYTANY 270
Score = 43.7 bits (89), Expect(2) = 2e-030
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = -3 / +1
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY+ D V ++NGV IG W+Y+ P G+ V+ Y+K+ Y
Sbjct: 310 SYTDDRRVSQTTEKNGVPIGTPTDLNWVYVYPRGIQDVLLYIKDNY 447
>gb|BU897065.1|BU897065 X050E06 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 394
Score = 104 bits (222), Expect(2) = 4e-030
Identities = 37/68 (54%), Positives = 54/68 (79%)
Frame = -3 / +3
Query: 463 KYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIV 284
KYQA+Q GK+GI L+ W+EP++NST+D AA+R+ DF +GWFL+P+ G YP M+++V
Sbjct: 3 KYQASQNGKIGITLNTPWFEPYSNSTDDYDAAKRSLDFTLGWFLNPITYGDYPTSMRELV 182
Query: 283 KDRLPSFT 260
K+RLP F+
Sbjct: 183 KERLPPFS 206
Score = 46.9 bits (96), Expect(2) = 4e-030
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = -3 / +1
Query: 241 VKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLY 68
VKG+ D+ G+N YT YY A+ T Y +D +R + IG A + W Y
Sbjct: 220 VKGTYDFVGLNYYTAYYAANANTSDPDHLRYQTDSNANITGERGRIPIGPKAGASWQY 393
>gb|CX657290.1|CX657290 PO02039B10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02039B10 5', mRNA sequence
Length = 628
Score = 101 bits (216), Expect(2) = 8e-029
Identities = 40/90 (44%), Positives = 57/90 (63%)
Frame = -3 / +1
Query: 460 YQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVK 281
YQA Q+G++GI + +W+ P N+T D+ A RA DF GWF P+ G P M+ +V
Sbjct: 1 YQAIQRGQIGITIVSHWFLPKFNTTADRIAVSRALDFMFGWFARPITFGD*PDSMRTLVG 180
Query: 280 DRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
+R P FT EQ+ ++KGS D+ G+N YT Y
Sbjct: 181 NRXPKFTKEQSAMLKGSLDFLGLNYYTANY 270
Score = 45.1 bits (92), Expect(2) = 8e-029
Identities = 18/46 (39%), Positives = 26/46 (56%)
Frame = -3 / +1
Query: 154 SYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
SY+ D V ++NGV IG WLY+ P G+ V+ Y+K+ Y
Sbjct: 310 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNY 447
>gb|CK097994.1|CK097994 A001P37.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 5', mRNA sequence
Length = 528
Score = 126 bits (270), Expect = 1e-028
Identities = 49/111 (44%), Positives = 69/111 (62%)
Frame = -3 / +3
Query: 379 QKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYT 200
Q ++ +++ F + P++ G+YPK MQ+IV RLP FT E+ K+VKGS D+ GIN YT
Sbjct: 96 QLSSSKSKRFSCWMVIHPIVYGEYPKTMQNIVGSRLPKFTEEEVKMVKGSMDFVGINHYT 275
Query: 199 TYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMY 47
TYY+ D Y DW + +++ GV+IG A+S WLY VP GMY
Sbjct: 276 TYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMY 428
Score = 83.5 bits (176), Expect(2) = 8e-028
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -3 / +1
Query: 475 RYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGW 338
RYR KYQ QKG++GI+LDF +YEP T S D AAQRARDFH+GW
Sbjct: 1 RYREKYQEKQKGRIGILLDFVYYEPLTRSKADNLAAQRARDFHVGW 138
Score = 60.2 bits (125), Expect(2) = 8e-028
Identities = 32/90 (35%), Positives = 46/90 (51%)
Frame = -2 / +2
Query: 317 WAISKDNARHCERPATKFHT*TGQASQGLIRLFRDQSIYYILHCRSTNSSAGTTELLVRL 138
W IS++NA++C AT+ + Q +GL +Q +YY+LH RST L RL
Sbjct: 158 W*ISENNAKYCREQATQVYRRRSQDGEGLNGFCGNQPLYYLLHVRSTPVQTKELGLPARL 337
Query: 137 GRPILLSKEWRANWTDGALNLALHRPIGHV 48
I L +E NW+ LAL +G+V
Sbjct: 338 ECWICL*EEGSGNWSKSKFLLAL*CTMGYV 427
>gb|DT476275.1|DT476275 WS01228.B21_P13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_P13 3', mRNA sequence
Length = 936
Score = 83.5 bits (176), Expect(2) = 7e-027
Identities = 31/47 (65%), Positives = 40/47 (85%)
Frame = -3 / -3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEP 401
+S+TEPYIV H+++LSHA AV RYR KYQ QKG++GI+LDF +YEP
Sbjct: 415 DSATEPYIVAHHLILSHAAAVQRYREKYQEKQKGRIGILLDFVYYEP 275
Score = 57.0 bits (118), Expect(2) = 7e-027
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = -3 / -3
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQ 557
DYA FKT RVK W EPR+VA GYD GL P C++
Sbjct: 568 DYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGLFAPGRCSK 440
>gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 617
Score = 118 bits (252), Expect = 4e-026
Identities = 47/94 (50%), Positives = 63/94 (67%)
Frame = -3 / +3
Query: 298 MQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYF 119
M +IV ++LP FT ++ K+VKGS D+ GINQYTT+Y+ D P Y DW V + +
Sbjct: 3 MLNIVGNKLPQFTKKKVKMVKGSMDFVGINQYTTFYMYDPHQPKPKYLGYQQDWNVGFAY 182
Query: 118 QRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
++NGV IG A+S WLY VP GMY V Y+KE+Y
Sbjct: 183 KKNGVPIGPRANSNWLYNVPWGMYKAVMYIKERY 284
>gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041F03 3', mRNA sequence
Length = 842
Score = 96.8 bits (205), Expect(2) = 1e-024
Identities = 34/85 (40%), Positives = 56/85 (65%)
Frame = -3 / -1
Query: 436 VGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTP 257
+GIV+ W+EP +NST ++ A +RA+ F + WFLDP+I G+YP+ M+ ++ LP F+
Sbjct: 839 IGIVMHCMWFEPISNSTANKLAVERAQAFFLRWFLDPIIFGRYPEEMKKVLGSTLPEFSR 660
Query: 256 EQAKLVKGSSDYFGINQYTTYYIAD 182
++ D+ G+N YT+YY+ D
Sbjct: 659 NDMNKLRKGLDFIGMNHYTSYYVQD 585
Score = 36.3 bits (73), Expect(2) = 1e-024
Identities = 12/34 (35%), Positives = 23/34 (67%)
Frame = -3 / -1
Query: 118 QRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
+++GV IG+ + W+++ GM +V Y+KE+Y
Sbjct: 515 EKDGVPIGKPSEVDWIHVYSRGMEKMVTYVKERY 414
>gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 5', mRNA sequence
Length = 673
Score = 111 bits (238), Expect = 3e-024
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = -3 / +2
Query: 286 VKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNG 107
V RLP FT E+ K+VKGS D+ GIN YTTYY+ D Y DW + +++ G
Sbjct: 2 VGSRLPKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKG 181
Query: 106 VQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
V+IG A+S WLY VP GMY V Y+KE+Y
Sbjct: 182 VEIGPRANSYWLYNVPWGMYKAVMYIKERY 271
>gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 3', mRNA sequence
Length = 673
Score = 111 bits (238), Expect = 3e-024
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = -3 / -2
Query: 286 VKDRLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNG 107
V RLP FT E+ K+VKGS D+ GIN YTTYY+ D Y DW + +++ G
Sbjct: 672 VGSRLPKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKG 493
Query: 106 VQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
V+IG A+S WLY VP GMY V Y+KE+Y
Sbjct: 492 VEIGPRANSYWLYNVPWGMYKAVMYIKERY 403
>gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_P11 3', mRNA sequence
Length = 667
Score = 111 bits (236), Expect = 7e-024
Identities = 43/87 (49%), Positives = 55/87 (63%)
Frame = -3 / -2
Query: 277 RLPSFTPEQAKLVKGSSDYFGINQYTTYYIADQQTPPQGPPSYSSDWGVQYYFQRNGVQI 98
RLP FT E+ K+VKGS D+ GIN YTTYY+ D Y DW + +++ GV+I
Sbjct: 660 RLPKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEI 481
Query: 97 GQMAHSIWLYIVPSGMYGVVNYLKEKY 17
G A+S WLY VP GMY V Y+KE+Y
Sbjct: 480 GPRANSYWLYNVPWGMYKAVMYIKERY 400
>gb|DT473223.1|DT473223 WS01228.BR_P13 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_P13 5', mRNA sequence
Length = 908
Score = 57.0 bits (118), Expect(3) = 7e-024
Identities = 22/43 (51%), Positives = 25/43 (58%)
Frame = -3 / +3
Query: 685 DYAXXXFKTXXXRVKXWXXLXEPRIVAXXGYDKGLXPPXXCTQ 557
DYA FKT RVK W EPR+VA GYD GL P C++
Sbjct: 609 DYADFCFKTFGDRVKNWMTFNEPRVVAALGYDNGLFAPGRCSK 737
Score = 56.5 bits (117), Expect(3) = 7e-024
Identities = 21/37 (56%), Positives = 29/37 (78%)
Frame = -3 / +3
Query: 541 NSSTEPYIVVHNILLSHATAVARYRNKYQATQKGKVG 431
+S+TEPYIV H+++LSHA AV RYR KYQ ++ +G
Sbjct: 762 DSATEPYIVAHHLILSHAAAVQRYREKYQENKREGLG 872
Score = 34.5 bits (69), Expect(3) = 7e-024
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = -3 / +2
Query: 448 QKGKVGIVLDFNWYEPFT 395
QKG++GI+LDF +YE FT
Sbjct: 854 QKGRIGILLDFVYYETFT 907
>gb|DT509401.1|DT509401 WS02423.BR_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 5', mRNA sequence
Length = 869
Score = 110 bits (234), Expect = 1e-023
Identities = 41/83 (49%), Positives = 60/83 (72%)
Frame = -3 / +1
Query: 535 STEPYIVVHNILLSHATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRAR 356
STEPY+ H+ +L+HA AV+ YR KY+ Q G++G+VLD W E +N TED+ AA R
Sbjct: 619 STEPYLASHHQILAHAAAVSIYRXKYKDKQGGQIGLVLDCEWAETGSNKTEDKVAASRRL 798
Query: 355 DFHIGWFLDPLINGQYPKIMQDI 287
+F +GW+L+PL G YP++M++I
Sbjct: 799 EFQLGWYLNPLYYGDYPEVMREI 867
>gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 634
Score = 75.3 bits (158), Expect(2) = 3e-021
Identities = 28/59 (47%), Positives = 39/59 (66%)
Frame = -3 / +2
Query: 367 QRARDFHIGWFLDPLINGQYPKIMQDIVKDRLPSFTPEQAKLVKGSSDYFGINQYTTYY 191
QR DF++GW L P+ G YP+ M+ +V DRLP+FT ++ ++GS D GIN Y YY
Sbjct: 11 QRILDFNLGWHLSPITYGDYPRSMRSLVGDRLPNFTAQEILDLRGSYDILGINYYGAYY 187
Score = 46.4 bits (95), Expect(2) = 3e-021
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = -3 / +2
Query: 151 YSSDWGVQYYFQRNGVQIGQMAHSIWLYIVPSGMYGVVNYLKEKY 17
Y++D V ++NG IG A S WLY+ P G+ ++NY K++Y
Sbjct: 233 YATDSHVNLTGEKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRY 367
>gb|AI161473.1|AI161473 A001P37U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 320
Score = 73.9 bits (155), Expect(2) = 5e-021
Identities = 26/58 (44%), Positives = 38/58 (65%)
Frame = -3 / +1
Query: 493 HATAVARYRNKYQATQKGKVGIVLDFNWYEPFTNSTEDQKAAQRARDFHIGWFLDPLI 320
+A AV RYR KYQ QKG++GI+LDF +YEP T S D ++ + ++ GW P++
Sbjct: 1 NAAAVQRYREKYQEKQKGRIGILLDFVYYEPLTRSKADNXSSSKEQEISFGWLFHPIV 174
Score = 46.4 bits (95), Expect(2) = 5e-021
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = -3 / +1
Query: 280 DRLPSFTPEQAKLVKGSSDYFGINQYTTYYIAD 182
++ P F E+ +VKGS D+ GI+ YTTYY+ D
Sbjct: 214 EQXPKFXEEEVXMVKGSMDFVGIHXYTTYYLYD 312
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 319,925,679
Number of Sequences: 369679
Number of extensions: 4486679
Number of successful extensions: 35191
Number of sequences better than 1.0e-020: 45
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8695744820
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)