TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 8161196.3.1
(825 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CX169048.1|CX169048 A10_69-60_02.ab1 leaf inoculated wit... 218 3e-056
gb|CX176282.1|CX176282 A12_69-27_02.ab1 leaf inoculated wit... 215 3e-055
gb|DT477275.1|DT477275 WS02519.BR_H20 PT-MB-N-A-15 Populus ... 214 5e-055
gb|DV465136.1|DV465136 MTUNUL1.P35.E03 NUL Populus fremonti... 214 5e-055
gb|CX183288.1|CX183288 D01_45-92_07.ab1 leaf inoculated wit... 198 4e-050
gb|CX177639.1|CX177639 F04_45-3_12.ab1 leaf inoculated with... 198 5e-050
gb|CX181538.1|CX181538 G02_45-1_14.ab1 leaf inoculated with... 198 5e-050
gb|CX177723.1|CX177723 G08_45-123_14.ab1 leaf inoculated wi... 196 2e-049
gb|CX181712.1|CX181712 D04_45-66_08.ab1 leaf inoculated wit... 196 2e-049
gb|CX179225.1|CX179225 F05_45-59_11.ab1 leaf inoculated wit... 190 8e-048
gb|DN498256.1|DN498256 S011G05.5pR Populus imbibed seed cDN... 188 4e-047
gb|BU862123.1|BU862123 S011G05 Populus imbibed seed cDNA li... 182 2e-045
gb|CX179157.1|CX179157 H12_45-62_16.ab1 leaf inoculated wit... 133 2e-030
gb|DT509246.1|DT509246 WS02423.BR_D08 PTxD-ICC-N-A-14 Popul... 133 2e-030
gb|CX179161.1|CX179161 A04_45-98_02.ab1 leaf inoculated wit... 130 1e-029
gb|CX180997.1|CX180997 B08_45-5_04.ab1 leaf inoculated with... 123 1e-027
gb|CX186927.1|CX186927 G03_45-87_13.ab1 leaf inoculated wit... 123 1e-027
gb|BP925996.1|BP925996 BP925996 full-length enriched poplar... 120 1e-026
gb|CX175679.1|CX175679 G09_69-119_13.ab1 leaf inoculated wi... 103 4e-026
>gb|CX169048.1|CX169048 A10_69-60_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 724
Score = 218 bits (471), Expect = 3e-056
Identities = 83/126 (65%), Positives = 99/126 (78%)
Frame = +3 / +2
Query: 330 TASGISLILSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLC 509
+A G +S M +C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC
Sbjct: 17 SARGFESAVS*SMGYVCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLC 196
Query: 510 DRCGLQPASVRCLEDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSF 689
+RC PA VRC E+ SLCQNCDW GH ++ AS H+RQ INCYSGCPS++ELS IWSF
Sbjct: 197 ERCNSHPALVRCAEERISLCQNCDWIGHGTSTSASTHRRQTINCYSGCPSASELSSIWSF 376
Query: 690 ITDIPT 707
+ D P+
Sbjct: 377 VLDFPS 394
Score = 70.3 bits (147), Expect(2) = 2e-023
Identities = 32/61 (52%), Positives = 37/61 (60%)
Frame = -3 / -2
Query: 703 GISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGC 524
G S D I ESS DG PE*Q + CLLC EA P QSQF ++LSS H T+AGC
Sbjct: 390 GKSKTKDHIEESSEADGQPE*QLIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGC 211
Query: 523 K 521
+
Sbjct: 210 E 208
Score = 58.8 bits (122), Expect(2) = 2e-023
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -2
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 168 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 49
>gb|CX176282.1|CX176282 A12_69-27_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 664
Score = 215 bits (464), Expect = 3e-055
Identities = 79/111 (71%), Positives = 93/111 (83%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC PA VRC E+
Sbjct: 332 VCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSHPALVRCAEE 511
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPT 707
SLCQNCDW GH ++ AS H+RQ INCYSGCPS++ELS IWSF+ D P+
Sbjct: 512 RISLCQNCDWIGHGTSTSASTHRRQTINCYSGCPSASELSFIWSFVLDFPS 664
Score = 69.3 bits (145), Expect(2) = 4e-023
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = -3 / -2
Query: 703 GISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGC 524
G S D + ESS DG PE*Q + CLLC EA P QSQF ++LSS H T+AGC
Sbjct: 660 GKSKTKDHMKESSEADGQPE*QLIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGC 481
Query: 523 K 521
+
Sbjct: 480 E 478
Score = 58.8 bits (122), Expect(2) = 4e-023
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -2
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 438 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 319
>gb|DT477275.1|DT477275 WS02519.BR_H20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_H20 5', mRNA sequence
Length = 806
Score = 214 bits (462), Expect = 5e-055
Identities = 81/118 (68%), Positives = 96/118 (81%)
Frame = +3 / +1
Query: 354 LSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPA 533
+S M +C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC QPA
Sbjct: 301 VSSSMGYVCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSQPA 480
Query: 534 SVRCLEDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPT 707
VRC E+ SLCQNCDW GH ++ AS H+RQ IN YSGCPS++ELS IWSF+ D P+
Sbjct: 481 LVRCAEERISLCQNCDWIGHGTSTSASTHRRQTINSYSGCPSASELSSIWSFVLDFPS 654
Score = 71.6 bits (150), Expect(2) = 8e-024
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = -3 / -1
Query: 703 GISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGC 524
G S ND I ESS DG PE*+ + CLLC EA P QSQF ++LSS H T+AGC
Sbjct: 650 GKSKTNDHIEESSEADGQPE*ELIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGC 471
Query: 523 K 521
+
Sbjct: 470 E 468
Score = 58.8 bits (122), Expect(2) = 8e-024
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -1
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 428 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 309
>gb|DV465136.1|DV465136 MTUNUL1.P35.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 902
Score = 214 bits (462), Expect = 5e-055
Identities = 81/118 (68%), Positives = 96/118 (81%)
Frame = +3 / +3
Query: 354 LSRIMVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPA 533
+S M +C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC QPA
Sbjct: 291 VSSSMGYVCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSQPA 470
Query: 534 SVRCLEDNTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPT 707
VRC E+ SLCQNCDW GH ++ AS H+RQ IN YSGCPS++ELS IWSF+ D P+
Sbjct: 471 LVRCAEERISLCQNCDWIGHGTSTSASTHRRQTINSYSGCPSASELSSIWSFVLDFPS 644
Score = 71.6 bits (150), Expect(2) = 8e-024
Identities = 32/61 (52%), Positives = 38/61 (62%)
Frame = -3 / -2
Query: 703 GISVINDQILESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGC 524
G S ND I ESS DG PE*+ + CLLC EA P QSQF ++LSS H T+AGC
Sbjct: 640 GKSKTNDHIEESSEADGQPE*ELIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGC 461
Query: 523 K 521
+
Sbjct: 460 E 458
Score = 58.8 bits (122), Expect(2) = 8e-024
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -2
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 418 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 299
>gb|CX183288.1|CX183288 D01_45-92_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 553
Score = 198 bits (427), Expect = 4e-050
Identities = 73/101 (72%), Positives = 86/101 (85%)
Frame = +3 / +1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC PA VRC E+
Sbjct: 241 VCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSHPALVRCAEE 420
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSR 677
SLCQNCDW GH ++ AS H+RQ INCYSGCPS++ELS+
Sbjct: 421 RISLCQNCDWIGHGTSTSASTHRRQTINCYSGCPSASELSQ 543
Score = 65.2 bits (136), Expect(2) = 7e-022
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3 / -3
Query: 673 ESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGCK 521
ESS DG PE*Q + CLLC EA P QSQF ++LSS H T+AGC+
Sbjct: 539 ESSEADGQPE*QLIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGCE 387
Score = 58.8 bits (122), Expect(2) = 7e-022
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -3
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 347 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 228
>gb|CX177639.1|CX177639 F04_45-3_12.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 646
Score = 198 bits (426), Expect = 5e-050
Identities = 73/100 (73%), Positives = 85/100 (85%)
Frame = +3 / +1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC PA VRC E+
Sbjct: 334 VCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSHPALVRCAEE 513
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELS 674
SLCQNCDW GH ++ AS H+RQ INCYSGCPS++ELS
Sbjct: 514 RISLCQNCDWIGHGTSTSASTHRRQTINCYSGCPSASELS 633
Score = 65.2 bits (136), Expect(2) = 7e-022
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3 / -3
Query: 673 ESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGCK 521
ESS DG PE*Q + CLLC EA P QSQF ++LSS H T+AGC+
Sbjct: 632 ESSEADGQPE*QLIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGCE 480
Score = 58.8 bits (122), Expect(2) = 7e-022
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -3
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 440 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 321
>gb|CX181538.1|CX181538 G02_45-1_14.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 638
Score = 198 bits (426), Expect = 5e-050
Identities = 73/100 (73%), Positives = 85/100 (85%)
Frame = +3 / +3
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC PA VRC E+
Sbjct: 312 VCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSHPALVRCAEE 491
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELS 674
SLCQNCDW GH ++ AS H+RQ INCYSGCPS++ELS
Sbjct: 492 RISLCQNCDWIGHGTSTSASTHRRQTINCYSGCPSASELS 611
Score = 65.2 bits (136), Expect(2) = 7e-022
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3 / -2
Query: 673 ESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGCK 521
ESS DG PE*Q + CLLC EA P QSQF ++LSS H T+AGC+
Sbjct: 610 ESSEADGQPE*QLIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGCE 458
Score = 58.8 bits (122), Expect(2) = 7e-022
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -2
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 418 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 299
>gb|CX177723.1|CX177723 G08_45-123_14.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 632
Score = 196 bits (422), Expect = 2e-049
Identities = 72/99 (72%), Positives = 84/99 (84%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC PA VRC E+
Sbjct: 335 VCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSHPALVRCAEE 514
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAEL 671
SLCQNCDW GH ++ AS H+RQ INCYSGCPS++EL
Sbjct: 515 RISLCQNCDWIGHGTSTSASTHRRQTINCYSGCPSASEL 631
Score = 62.9 bits (131), Expect(2) = 3e-021
Identities = 27/50 (54%), Positives = 32/50 (64%)
Frame = -3 / -3
Query: 670 SSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGCK 521
SS DG PE*Q + CLLC EA P QSQF ++LSS H T+AGC+
Sbjct: 630 SSEADGQPE*QLIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGCE 481
Score = 58.8 bits (122), Expect(2) = 3e-021
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -3
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 441 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 322
>gb|CX181712.1|CX181712 D04_45-66_08.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 630
Score = 196 bits (422), Expect = 2e-049
Identities = 72/99 (72%), Positives = 84/99 (84%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC PA VRC E+
Sbjct: 332 VCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSHPALVRCAEE 511
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAEL 671
SLCQNCDW GH ++ AS H+RQ INCYSGCPS++EL
Sbjct: 512 RISLCQNCDWIGHGTSTSASTHRRQTINCYSGCPSASEL 628
Score = 65.2 bits (136), Expect(2) = 7e-022
Identities = 28/51 (54%), Positives = 33/51 (64%)
Frame = -3 / -1
Query: 673 ESSADDGHPE*QFMACLLCPEAPDAASCPFQSQFWQSDVLSSRHRTDAGCK 521
ESS DG PE*Q + CLLC EA P QSQF ++LSS H T+AGC+
Sbjct: 630 ESSEADGQPE*QLIVCLLCVEADVEVPWPIQSQF*HREILSSAHLTNAGCE 478
Score = 58.8 bits (122), Expect(2) = 7e-022
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = -3 / -1
Query: 481 DSALAE*TLRSHDKHNDAASDLQ*IIDLCFPQKPQRGTMI 362
D ALAE*T RSHDKH AASD Q* +DLC PQK Q M+
Sbjct: 438 DKALAE*TFRSHDKHKLAASDRQ*TMDLCSPQKSQT*PML 319
>gb|CX179225.1|CX179225 F05_45-59_11.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 588
Score = 190 bits (410), Expect = 8e-048
Identities = 69/97 (71%), Positives = 82/97 (84%)
Frame = +3 / +1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
+C FCG+QRSM+YCRSDAASLCLSCDR+VHSANALS+RH RTLLC+RC PA VRC E+
Sbjct: 298 VCDFCGEQRSMVYCRSDAASLCLSCDRNVHSANALSKRHSRTLLCERCNSHPALVRCAEE 477
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSA 665
SLCQNCDW GH ++ AS H++Q INCYSGCPS++
Sbjct: 478 RISLCQNCDWIGHGTSTSASTHRKQTINCYSGCPSAS 588
>gb|DN498256.1|DN498256 S011G05.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S011G05 5', mRNA sequence
Length = 715
Score = 188 bits (405), Expect = 4e-047
Identities = 72/104 (69%), Positives = 84/104 (80%)
Frame = +3 / +3
Query: 396 QRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQN 575
+RSM+YCRSDAA LCLSCD+ VHSANALS+RH RTLLC+RC QPA VR E+ SLCQN
Sbjct: 198 RRSMVYCRSDAACLCLSCDQIVHSANALSKRHSRTLLCERCNPQPALVRRAEERISLCQN 377
Query: 576 CDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPT 707
CDW G+ +++ AS HKRQ INCYSGCPS +ELS IW FI D P+
Sbjct: 378 CDWTGYGSSTSASTHKRQTINCYSGCPSVSELSSIWPFILDFPS 509
>gb|BU862123.1|BU862123 S011G05 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 523
Score = 182 bits (392), Expect = 2e-045
Identities = 70/104 (67%), Positives = 82/104 (78%)
Frame = +3 / +1
Query: 396 QRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQN 575
+RSM+YCRSDAA LCLSCD+ VHSANALS+RH RTLLC+RC QPA VR E+ SLCQN
Sbjct: 199 RRSMVYCRSDAACLCLSCDQIVHSANALSKRHSRTLLCERCNPQPALVRRAEERISLCQN 378
Query: 576 CDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSFITDIPT 707
CDW G+ +++ A HKRQ INCYSGCPS +ELS IW FI P+
Sbjct: 379 CDWTGYGSSTSAYTHKRQTINCYSGCPSVSELSSIWPFILHFPS 510
>gb|CX179157.1|CX179157 H12_45-62_16.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 671
Score = 133 bits (284), Expect = 2e-030
Identities = 48/105 (45%), Positives = 65/105 (61%)
Frame = +3 / +3
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
LC +C +++YCR+D+A LC SCD VHS N L +H R+LLCD C P S+ C +
Sbjct: 66 LCDYCNDTTALLYCRADSAKLCFSCDHEVHSTNQLFSKHTRSLLCDACHASPVSIFCQTE 245
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSF 689
++ CQNCDW H +S +S H R+ I ++GCPS EL I F
Sbjct: 246 HSVFCQNCDWERHSLSSLSSTHIRRPIEGFTGCPSGNELMTILGF 380
>gb|DT509246.1|DT509246 WS02423.BR_D08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_D08 5', mRNA sequence
Length = 875
Score = 133 bits (284), Expect = 2e-030
Identities = 48/105 (45%), Positives = 65/105 (61%)
Frame = +3 / +2
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
LC +C +++YCR+D+A LC SCD VHS N L +H R+LLCD C P S+ C +
Sbjct: 92 LCDYCNDTTALLYCRADSAKLCFSCDHEVHSTNQLFSKHTRSLLCDACHASPVSIFCQTE 271
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSF 689
++ CQNCDW H +S +S H R+ I ++GCPS EL I F
Sbjct: 272 HSVFCQNCDWERHSLSSLSSTHIRRPIEGFTGCPSGNELMTILGF 406
>gb|CX179161.1|CX179161 A04_45-98_02.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 627
Score = 130 bits (278), Expect = 1e-029
Identities = 47/104 (45%), Positives = 64/104 (61%)
Frame = +3 / +1
Query: 378 CGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDN 557
C +C +++YCR+D+A LC SCD VHS N L +H R+LLCD C P S+ C ++
Sbjct: 43 CDYCKDTTALLYCRADSAKLCFSCDHEVHSTNQLFSKHTRSLLCDACHASPVSIFCQTEH 222
Query: 558 TSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSF 689
+ CQNCDW H +S +S H R+ I ++GCPS EL I F
Sbjct: 223 SVFCQNCDWERHSLSSLSSTHIRRPIEGFTGCPSGNELMTILGF 354
>gb|CX180997.1|CX180997 B08_45-5_04.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 639
Score = 123 bits (264), Expect = 1e-027
Identities = 47/105 (44%), Positives = 63/105 (60%)
Frame = +3 / +1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
LC +C +++YCR+D+A LCLSCD VHS N L +H R+LLCD C P S+ C +
Sbjct: 91 LCDYCNDTTALLYCRADSAKLCLSCDHEVHSTNQLFSKHTRSLLCDVCHTSPVSIFCETE 270
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSF 689
++ CQNCD H +S S H R+ I ++G PS EL I F
Sbjct: 271 HSVFCQNCDLERHSLSSFPSTHNRRPIEGFTGYPSGNELMEILGF 405
>gb|CX186927.1|CX186927 G03_45-87_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 693
Score = 123 bits (264), Expect = 1e-027
Identities = 47/105 (44%), Positives = 63/105 (60%)
Frame = +3 / +1
Query: 375 LCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLED 554
LC +C +++YCR+D+A LCLSCD VHS N L +H R+LLCD C P S+ C +
Sbjct: 91 LCDYCNDTTALLYCRADSAKLCLSCDHEVHSTNQLFSKHTRSLLCDVCHTSPVSIFCETE 270
Query: 555 NTSLCQNCDWNGHDAASGASGHKRQAINCYSGCPSSAELSRIWSF 689
++ CQNCD H +S S H R+ I ++G PS EL I F
Sbjct: 271 HSVFCQNCDLERHSLSSFPSTHNRRPIEGFTGYPSGNELMEILGF 405
>gb|BP925996.1|BP925996 BP925996 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-053_K08.f 5', mRNA sequence
Length = 401
Score = 120 bits (256), Expect = 1e-026
Identities = 45/92 (48%), Positives = 58/92 (63%)
Frame = +3 / +3
Query: 414 CRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRCLEDNTSLCQNCDWNGH 593
CR+D+A LC SCDR VHS N L +H R+LLCD C P S+ C +++ CQNCDW H
Sbjct: 3 CRADSAKLCFSCDREVHSTNQLFSKHTRSLLCDACHASPVSIFCQTEHSVFCQNCDWERH 182
Query: 594 DAASGASGHKRQAINCYSGCPSSAELSRIWSF 689
+S +S H R+ I ++GCPS EL I F
Sbjct: 183 SLSSLSSTHIRRPIEGFTGCPSGNELMTILGF 278
>gb|CX175679.1|CX175679 G09_69-119_13.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 690
Score = 103 bits (220), Expect(2) = 4e-026
Identities = 41/80 (51%), Positives = 50/80 (62%)
Frame = +3 / +1
Query: 366 MVPLCGFCGKQRSMIYCRSDAASLCLSCDRSVHSANALSRRHRRTLLCDRCGLQPASVRC 545
M +C FC R ++YC +DAA LCLSCD VHSANAL RH RTLLCD C PA +C
Sbjct: 247 MEKVCEFCMALRPVVYCNADAAYLCLSCDAKVHSANALFNRHLRTLLCDSCRNHPAYAQC 426
Query: 546 LEDNTSLCQNCDWNGHDAAS 605
L+ +C CD H+ +S
Sbjct: 427 LDHRMLMCLGCDRCLHEVSS 486
Score = 34.5 bits (69), Expect(2) = 4e-026
Identities = 9/27 (33%), Positives = 19/27 (70%)
Frame = +3 / +1
Query: 609 ASGHKRQAINCYSGCPSSAELSRIWSF 689
+S H+++ ++ Y GCPS+ + + +W F
Sbjct: 481 SSHHQKRLVSSYLGCPSAKDFASLWGF 561
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 438,809,825
Number of Sequences: 369679
Number of extensions: 6535969
Number of successful extensions: 65965
Number of sequences better than 1.0e-020: 19
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10784666760
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)