TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4580194.2.1
(542 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DV464757.1|DV464757 MTUNUL1.P30.E03 NUL Populus fremonti... 127 9e-033
gb|CN520443.1|CN520443 GQ0107.B3_P07 GQ010 Populus trichoca... 127 9e-033
gb|CK318709.1|CK318709 X9P02e05 Populus stem seasonal libra... 127 9e-033
gb|BP921981.1|BP921981 BP921981 full-length enriched poplar... 127 9e-033
gb|BI131203.1|BI131203 G116P96Y Populus cambium cDNA librar... 126 1e-032
gb|CN549929.1|CN549929 GQ0242.B3_K14 GQ024 Populus trichoca... 125 3e-032
gb|DT500078.1|DT500078 PX0011.BR_C09 PT-X-FL-A-1 Populus tr... 125 3e-032
gb|AJ776650.1|AJ776650 AJ776650 Populus euphratica root 3-6... 126 3e-032
gb|BI131208.1|BI131208 G117P05Y Populus cambium cDNA librar... 125 3e-032
gb|AI167071.1|AI167071 xylem.est.840 Poplar xylem Lambda ZA... 125 4e-032
gb|CF236458.1|CF236458 PtaJXT3A7A0701 Poplar cDNA library f... 125 5e-032
gb|CF235426.1|CF235426 PtaJXT0022F7F0711 Poplar cDNA librar... 125 5e-032
gb|CF232745.1|CF232745 PtaJXO0015C8C0806 Poplar cDNA librar... 125 5e-032
gb|CF232804.1|CF232804 PtaJXO0016A6A0602 Poplar cDNA librar... 125 5e-032
gb|CF228757.1|CF228757 PtaXM0017A6A0602 Poplar cDNA library... 125 5e-032
gb|CF228100.1|CF228100 PtaXM0008G11G1113 Poplar cDNA librar... 125 5e-032
gb|CF232722.1|CF232722 PtaJXO0015A7A0701 Poplar cDNA librar... 125 5e-032
gb|CF234531.1|CF234531 PtaJXO0010H12A0101 Poplar cDNA libra... 125 5e-032
gb|CF236537.1|CF236537 PtaJXT4A3A0301 Poplar cDNA library f... 125 5e-032
gb|CF236460.1|CF236460 PtaJXT3B10B1004 Poplar cDNA library ... 125 5e-032
gb|CF232297.1|CF232297 PtaJXO0008G10G1014 Poplar cDNA libra... 125 5e-032
gb|CF233984.1|CF233984 PtaJXO0029H8H0816 Poplar cDNA librar... 125 5e-032
gb|CF234420.1|CF234420 Ptajxojxo2D2D0208 Poplar cDNA librar... 125 5e-032
gb|CF236996.1|CF236996 PtaJXT9F1F0111 Poplar cDNA library f... 125 5e-032
gb|CF237005.1|CF237005 PtaJXT9G10G1014 Poplar cDNA library ... 125 5e-032
gb|BI128424.1|BI128424 G075P64Y Populus cambium cDNA librar... 125 5e-032
gb|BI129560.1|BI129560 G092P48Y Populus cambium cDNA librar... 125 5e-032
gb|BU821482.1|BU821482 UB23CPG05 Populus tremula cambium cD... 131 5e-032
gb|CF233046.1|CF233046 PtaJXO0018G10G1014 Poplar cDNA libra... 124 6e-032
gb|CF232184.1|CF232184 PtaJXO0007D5D0507 Poplar cDNA librar... 124 6e-032
gb|CF227731.1|CF227731 PtaXM0003H1H0115 Poplar cDNA library... 124 8e-032
gb|AJ773215.1|AJ773215 AJ773215 Populus euphratica leaf 3-6... 130 1e-031
gb|CX173264.1|CX173264 B11_69-14-1_03.ab1 leaf inoculated w... 130 1e-031
gb|AJ774529.1|AJ774529 AJ774529 Populus euphratica shoot 3-... 130 1e-031
gb|AJ776506.1|AJ776506 AJ776506 Populus euphratica root 3-6... 130 1e-031
gb|CF236469.1|CF236469 PtaJXT3B8B0804 Poplar cDNA library f... 123 2e-031
gb|CF229723.1|CF229723 PtaXM0028G8G0814 Poplar cDNA library... 123 3e-031
gb|CF233513.1|CF233513 PtaJXO0024E12E1210 Poplar cDNA libra... 125 3e-031
gb|CF234270.1|CF234270 PtaJXO4E3E0309 Poplar cDNA library f... 125 3e-031
gb|DT473087.1|DT473087 WS01228.BR_I15 PT-GT-FL-A-3 Populus ... 128 4e-031
gb|DT473001.1|DT473001 WS01228.BR_E07 PT-GT-FL-A-3 Populus ... 128 4e-031
gb|CN520898.1|CN520898 GQ0107.B3_M07 GQ010 Populus trichoca... 128 4e-031
gb|DT473400.1|DT473400 WS01229.BR_I17 PT-GT-FL-A-3 Populus ... 128 4e-031
gb|DT476421.1|DT476421 WS01229.B21_I17 PT-GT-FL-A-3 Populus... 128 4e-031
gb|DT500585.1|DT500585 PX0015.BR_O21 PT-X-FL-A-1 Populus tr... 128 4e-031
gb|DT474964.1|DT474964 WS0125.BR_J03 PT-GT-FL-A-3 Populus t... 128 4e-031
gb|CN517305.1|CN517305 GQ0094.B3_O19 GQ009 Populus trichoca... 128 4e-031
gb|CB239469.1|CB239469 RSH12B04 two-month-old roots from cl... 128 4e-031
gb|AI166930.1|AI166930 xylem.est.713 Poplar xylem Lambda ZA... 128 4e-031
gb|BI139082.1|BI139082 F122P82Y Populus flower cDNA library... 128 4e-031
gb|BI138090.1|BI138090 F098P51Y Populus flower cDNA library... 128 4e-031
gb|CF235751.1|CF235751 PtaJXT0026E9E0909 Poplar cDNA librar... 127 6e-031
gb|CB239422.1|CB239422 RSH11B03 two-month-old roots from cl... 127 6e-031
gb|CK319040.1|CK319040 X9P06c03 Populus stem seasonal libra... 121 6e-031
gb|CF234669.1|CF234669 PtaJXT0013F5F0511 Poplar cDNA librar... 121 8e-031
gb|BP921985.1|BP921985 BP921985 full-length enriched poplar... 127 8e-031
gb|CF235341.1|CF235341 PtaJXT0021F8F0812 Poplar cDNA librar... 127 1e-030
gb|BP929685.1|BP929685 BP929685 full-length enriched poplar... 127 1e-030
gb|CK103494.1|CK103494 G120P24.5pR Populus tension wood cDN... 127 1e-030
gb|BP927464.1|BP927464 BP927464 full-length enriched poplar... 126 2e-030
gb|CK319285.1|CK319285 X9P09a08 Populus stem seasonal libra... 127 3e-030
gb|CF235289.1|CF235289 PtaJXT0021A7A0701 Poplar cDNA librar... 125 4e-030
gb|CF236199.1|CF236199 PtaJXT1H6H0616 Poplar cDNA library f... 125 5e-030
gb|CF228701.1|CF228701 PtaXM0016C9C0905 Poplar cDNA library... 126 9e-030
gb|CF233248.1|CF233248 PtaJXO0021A3A0301 Poplar cDNA librar... 125 2e-029
gb|DV465562.1|DV465562 MTUNUL1.P40.C03 NUL Populus fremonti... 74 3e-029
gb|DV464577.1|DV464577 MTUNUL1.P29.C06 NUL Populus fremonti... 74 3e-029
gb|CF234878.1|CF234878 PtaJXT0016C12C1206 Poplar cDNA libra... 102 3e-029
gb|CF229275.1|CF229275 PtaXM0023D5D0507 Poplar cDNA library... 102 3e-029
gb|AI162545.1|AI162545 A019P23U Hybrid aspen plasmid librar... 115 3e-029
gb|CX660306.1|CX660306 PO01035D03 Poplar SC cDNA library Po... 127 4e-029
gb|AJ778561.1|AJ778561 AJ778561 Populus euphratica cambium ... 115 5e-029
gb|BU870298.1|BU870298 Q010P06 Populus flower cDNA library ... 127 7e-029
gb|CK111221.1|CK111221 Q010H03 Populus dormant bud cDNA lib... 127 7e-029
gb|CF236644.1|CF236644 PtaJXT5D12D1208 Poplar cDNA library ... 120 8e-029
gb|BP923239.1|BP923239 BP923239 full-length enriched poplar... 120 8e-029
gb|CA934379.1|CA934379 MTU3TS.P6.H03 Aspen stem cDNA Librar... 126 1e-028
gb|BP924606.1|BP924606 BP924606 full-length enriched poplar... 119 2e-028
gb|CF236744.1|CF236744 PtaJXT6F6F0612 Poplar cDNA library f... 114 8e-028
gb|CK319484.1|CK319484 X9P11c08 Populus stem seasonal libra... 110 3e-027
gb|BI138464.1|BI138464 F107P11Y Populus flower cDNA library... 113 5e-027
gb|BI131427.1|BI131427 G120P73Y Populus cambium cDNA librar... 113 1e-026
gb|CA934082.1|CA934082 MTU3TS.P2.E12 Aspen stem cDNA Librar... 110 1e-026
gb|CA934116.1|CA934116 MTU3TS.P3.B02 Aspen stem cDNA Librar... 110 1e-026
gb|CF227660.1|CF227660 PtaXM0002H12H1216 Poplar cDNA librar... 103 2e-025
gb|BI128599.1|BI128599 G078P74Y Populus cambium cDNA librar... 77 2e-025
gb|AI165943.1|AI165943 B004p59u Hybrid aspen plasmid librar... 110 2e-025
gb|CF233848.1|CF233848 PtaJXO0028C6C0606 Poplar cDNA librar... 100 1e-024
gb|CK116510.1|CK116510 B013P12 Hybrid aspen plasmid library... 99 4e-024
gb|BP929413.1|BP929413 BP929413 full-length enriched poplar... 87 2e-023
gb|CF228702.1|CF228702 PtaXM0016D11D1107 Poplar cDNA librar... 100 6e-023
>gb|DV464757.1|DV464757 MTUNUL1.P30.E03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 785
Score = 127 bits (272), Expect(2) = 9e-033
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF TTGGK
Sbjct: 231 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTTGGKL 410
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 411 TGQKEVAAFL 440
Score = 32.2 bits (64), Expect(2) = 9e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 192 KKVCDKGWECKGLSAYC 242
>gb|CN520443.1|CN520443 GQ0107.B3_P07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_P07 5', mRNA sequence
Length = 740
Score = 127 bits (272), Expect(2) = 9e-033
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF TTGGK
Sbjct: 221 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTTGGKL 400
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 401 TGQKEVAAFL 430
Score = 32.2 bits (64), Expect(2) = 9e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 182 KKVCDKGWECKGLSAYC 232
>gb|CK318709.1|CK318709 X9P02e05 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 715
Score = 127 bits (272), Expect(2) = 9e-033
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF TTGGK
Sbjct: 47 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTTGGKL 226
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 227 TGQKEVAAFL 256
Score = 32.2 bits (64), Expect(2) = 9e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 8 KKVCDKGWECKGLSAYC 58
>gb|BP921981.1|BP921981 BP921981 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-002_D14.f 5', mRNA sequence
Length = 536
Score = 127 bits (272), Expect(2) = 9e-033
Identities = 49/70 (70%), Positives = 56/70 (80%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF TTGGK
Sbjct: 235 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTTGGKL 414
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 415 TGQKEVAAFL 444
Score = 32.2 bits (64), Expect(2) = 9e-033
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 196 KKVCDKGWECKGLSAYC 246
>gb|BI131203.1|BI131203 G116P96Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 398
Score = 126 bits (270), Expect(2) = 1e-032
Identities = 49/70 (70%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY AFITAAA ++P GF T GGK
Sbjct: 44 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHAFITAAAEYQPHGFGTAGGKL 223
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 224 TGQKEVAAFL 253
Score = 32.2 bits (64), Expect(2) = 1e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 5 KKVCDKGWECKGLSAYC 55
>gb|CN549929.1|CN549929 GQ0242.B3_K14 GQ024 Populus trichocarpa x Populus deltoides cDNA
clone GQ0242_K14 5', mRNA sequence
Length = 685
Score = 125 bits (268), Expect(2) = 3e-032
Identities = 48/70 (68%), Positives = 56/70 (80%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T+GGK
Sbjct: 176 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTSGGKL 355
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 356 TGQKEVAAFL 385
Score = 32.2 bits (64), Expect(2) = 3e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 137 KKVCDKGWECKGLSAYC 187
>gb|DT500078.1|DT500078 PX0011.BR_C09 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0011_C09
5', mRNA sequence
Length = 588
Score = 125 bits (268), Expect(2) = 3e-032
Identities = 48/70 (68%), Positives = 56/70 (80%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T+GGK
Sbjct: 236 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTSGGKL 415
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 416 TGQKEVAAFL 445
Score = 32.2 bits (64), Expect(2) = 3e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 197 KKVCDKGWECKGLSAYC 247
>gb|AJ776650.1|AJ776650 AJ776650 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400016E09F1, mRNA sequence
Length = 444
Score = 126 bits (269), Expect(2) = 3e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITA A ++P GF TTGGK
Sbjct: 190 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITATAEYQPHGFGTTGGKL 369
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 370 TXQKEVAAFL 399
Score = 31.8 bits (63), Expect(2) = 3e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 151 KKLCDKGWECKGLSAYC 201
>gb|BI131208.1|BI131208 G117P05Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 396
Score = 125 bits (267), Expect(2) = 3e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 74 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 253
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 254 TGQKEVAAFL 283
Score = 32.2 bits (64), Expect(2) = 3e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 35 KKVCDKGWECKGLSAYC 85
>gb|AI167071.1|AI167071 xylem.est.840 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 422
Score = 125 bits (267), Expect(2) = 4e-032
Identities = 48/70 (68%), Positives = 56/70 (80%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T+GGK
Sbjct: 149 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTSGGKL 328
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 329 TGXKEVAAFL 358
Score = 32.2 bits (64), Expect(2) = 4e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 110 KKVCDKGWECKGLSAYC 160
>gb|CF236458.1|CF236458 PtaJXT3A7A0701 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 234 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 413
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 414 TGQKEVAAFL 443
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 195 KKVCDKGWECKGLSAYC 245
>gb|CF235426.1|CF235426 PtaJXT0022F7F0711 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 760
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 232 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 411
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 412 TGQKEVAAFL 441
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 193 KKVCDKGWECKGLSAYC 243
>gb|CF232745.1|CF232745 PtaJXO0015C8C0806 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 749
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 227 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 406
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 407 TGQKEVAAFL 436
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 188 KKVCDKGWECKGLSAYC 238
>gb|CF232804.1|CF232804 PtaJXO0016A6A0602 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 742
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 231 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 410
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 411 TGQKEVAAFL 440
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 192 KKVCDKGWECKGLSAYC 242
>gb|CF228757.1|CF228757 PtaXM0017A6A0602 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 739
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 236 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 415
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 416 TGQKEVAAFL 445
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 197 KKVCDKGWECKGLSAYC 247
>gb|CF228100.1|CF228100 PtaXM0008G11G1113 Poplar cDNA library from mature xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 724
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 232 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 411
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 412 TGQKEVAAFL 441
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 193 KKVCDKGWECKGLSAYC 243
>gb|CF232722.1|CF232722 PtaJXO0015A7A0701 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 711
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 232 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 411
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 412 TGQKEVAAFL 441
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 193 KKVCDKGWECKGLSAYC 243
>gb|CF234531.1|CF234531 PtaJXO0010H12A0101 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 709
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 231 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 410
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 411 TGQKEVAAFL 440
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 192 KKVCDKGWECKGLSAYC 242
>gb|CF236537.1|CF236537 PtaJXT4A3A0301 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 703
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 232 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 411
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 412 TGQKEVAAFL 441
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 193 KKVCDKGWECKGLSAYC 243
>gb|CF236460.1|CF236460 PtaJXT3B10B1004 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 696
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 233 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 412
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 413 TGQKEVAAFL 442
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 194 KKVCDKGWECKGLSAYC 244
>gb|CF232297.1|CF232297 PtaJXO0008G10G1014 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 688
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 232 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 411
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 412 TGQKEVAAFL 441
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 193 KKVCDKGWECKGLSAYC 243
>gb|CF233984.1|CF233984 PtaJXO0029H8H0816 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 657
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 233 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 412
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 413 TGQKEVAAFL 442
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 194 KKVCDKGWECKGLSAYC 244
>gb|CF234420.1|CF234420 Ptajxojxo2D2D0208 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 648
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 124 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 303
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 304 TGQKEVAAFL 333
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 85 KKVCDKGWECKGLSAYC 135
>gb|CF236996.1|CF236996 PtaJXT9F1F0111 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 637
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 214 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 393
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 394 TGQKEVAAFL 423
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 175 KKVCDKGWECKGLSAYC 225
>gb|CF237005.1|CF237005 PtaJXT9G10G1014 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 618
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 268 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 447
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 448 TGQKEVAAFL 477
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 229 KKVCDKGWECKGLSAYC 279
>gb|BI128424.1|BI128424 G075P64Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 542
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 95 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 274
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 275 TGQKEVAAFL 304
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 56 KKVCDKGWECKGLSAYC 106
>gb|BI129560.1|BI129560 G092P48Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 530
Score = 125 bits (267), Expect(2) = 5e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 212 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 391
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 392 TGQKEVAAFL 421
Score = 32.2 bits (64), Expect(2) = 5e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 173 KKVCDKGWECKGLSAYC 223
>gb|BU821482.1|BU821482 UB23CPG05 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 472
Score = 131 bits (281), Expect(2) = 5e-032
Identities = 50/70 (71%), Positives = 57/70 (81%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN TI+DFF+ YQFENLF+ RN+PVAHAVGFWDYQ+FI A F+ GFCTTGGK
Sbjct: 216 SEYCCNQTISDFFESYQFENLFSNRNSPVAHAVGFWDYQSFILATTSFQHLGFCTTGGKA 395
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 396 TQMKELAAFL 425
Score = 25.8 bits (50), Expect(2) = 5e-032
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 177 KKLCKRGWEC 206
>gb|CF233046.1|CF233046 PtaJXO0018G10G1014 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 124 bits (266), Expect(2) = 6e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 230 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 409
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 410 TGXKEVAAFL 439
Score = 32.2 bits (64), Expect(2) = 6e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +2
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 191 KKVCDKGWECKGLSAYC 241
>gb|CF232184.1|CF232184 PtaJXO0007D5D0507 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 725
Score = 124 bits (266), Expect(2) = 6e-032
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 229 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 408
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 409 TGXKEVAAFL 438
Score = 32.2 bits (64), Expect(2) = 6e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 190 KKVCDKGWECKGLSAYC 240
>gb|CF227731.1|CF227731 PtaXM0003H1H0115 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 671
Score = 124 bits (265), Expect(2) = 8e-032
Identities = 48/70 (68%), Positives = 54/70 (77%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA + P GF T GGK
Sbjct: 234 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYHPHGFGTAGGKL 413
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 414 TGQKEVAAFL 443
Score = 32.2 bits (64), Expect(2) = 8e-032
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2 / +3
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+KGWEC G C
Sbjct: 195 KKVCDKGWECKGLSAYC 245
>gb|AJ773215.1|AJ773215 AJ773215 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000200006H01F1, mRNA sequence
Length = 631
Score = 130 bits (278), Expect(2) = 1e-031
Identities = 49/70 (70%), Positives = 58/70 (82%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN TI+DFF+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 202 SEYCCNQTISDFFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 381
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 382 TQMKELAAFL 411
Score = 25.8 bits (50), Expect(2) = 1e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 163 KKLCKRGWEC 192
>gb|CX173264.1|CX173264 B11_69-14-1_03.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 582
Score = 130 bits (278), Expect(2) = 1e-031
Identities = 49/70 (70%), Positives = 58/70 (82%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 251 SEYCCNQTISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTRFQHLGFCTTGGKA 430
Query: 512 MQMMELCAFL 541
MQM EL AFL
Sbjct: 431 MQMKELAAFL 460
Score = 25.8 bits (50), Expect(2) = 1e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 212 KKLCKRGWEC 241
>gb|AJ774529.1|AJ774529 AJ774529 Populus euphratica shoot 3-6 months Populus euphratica
cDNA clone P0000300021D12F1, mRNA sequence
Length = 555
Score = 130 bits (278), Expect(2) = 1e-031
Identities = 49/70 (70%), Positives = 58/70 (82%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN TI+DFF+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 184 SEYCCNQTISDFFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 363
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 364 TQMKELAAFL 393
Score = 25.8 bits (50), Expect(2) = 1e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 145 KKLCKRGWEC 174
>gb|AJ776506.1|AJ776506 AJ776506 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400014D03F1, mRNA sequence
Length = 461
Score = 130 bits (278), Expect(2) = 1e-031
Identities = 49/70 (70%), Positives = 58/70 (82%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN TI+DFF+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 214 SEYCCNQTISDFFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 393
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 394 TQMKELAAFL 423
Score = 25.8 bits (50), Expect(2) = 1e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 175 KKLCKRGWEC 204
>gb|CF236469.1|CF236469 PtaJXT3B8B0804 Poplar cDNA library from young tension xylem Populus
alba x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 123 bits (263), Expect(2) = 2e-031
Identities = 47/70 (67%), Positives = 54/70 (77%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITA A ++P GF T GGK
Sbjct: 238 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAVAEYQPHGFGTAGGKL 417
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 418 TGQKEVAAFL 447
Score = 31.8 bits (63), Expect(2) = 2e-031
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +2 / +1
Query: 299 KICNKGWECSGSKYCC 346
K+C+KGWEC G C
Sbjct: 202 KVCDKGWECKGLSAYC 249
>gb|CF229723.1|CF229723 PtaXM0028G8G0814 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 692
Score = 123 bits (264), Expect(2) = 3e-031
Identities = 47/70 (67%), Positives = 54/70 (77%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTP AHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 232 SAYCCNQTISDFFQTYQFENLFSKRNTPAAHASGFWDYHSFITAAAXYQPHGFGTAGGKL 411
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 412 TGXKEVAAFL 441
Score = 30.9 bits (61), Expect(2) = 3e-031
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+K+C++GWEC G C
Sbjct: 193 KKVCDRGWECKGLSAYC 243
>gb|CF233513.1|CF233513 PtaJXO0024E12E1210 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 650
Score = 125 bits (267), Expect(2) = 3e-031
Identities = 48/70 (68%), Positives = 55/70 (78%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY +FITAAA ++P GF T GGK
Sbjct: 232 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHSFITAAAEYQPHGFGTAGGKL 411
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 412 TGQKEVAAFL 441
Score = 29.5 bits (58), Expect(2) = 3e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / +1
Query: 296 EKICNKGWECSGSKYCC 346
+ +C+KGWEC G C
Sbjct: 193 KXVCDKGWECKGLSAYC 243
>gb|CF234270.1|CF234270 PtaJXO4E3E0309 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 646
Score = 125 bits (267), Expect(2) = 3e-031
Identities = 48/70 (68%), Positives = 54/70 (77%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S YCCN TI+DFF+ YQFENLF+KRNTPVAHA GFWDY FITAAA ++P GF T GGK
Sbjct: 222 SAYCCNQTISDFFQTYQFENLFSKRNTPVAHASGFWDYHPFITAAAXYQPHGFGTAGGKL 401
Query: 512 MQMMELCAFL 541
E+ AFL
Sbjct: 402 TGQKEVAAFL 431
Score = 29.5 bits (58), Expect(2) = 3e-031
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2 / +3
Query: 296 EKICNKGWECSGSKYCC 346
+K+C+ GWEC G C
Sbjct: 183 KKVCDXGWECKGLSAYC 233
>gb|DT473087.1|DT473087 WS01228.BR_I15 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_I15 5', mRNA sequence
Length = 866
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 218 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 397
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 398 TQMKELAAFL 427
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 179 KKLCKRGWEC 208
>gb|DT473001.1|DT473001 WS01228.BR_E07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_E07 5', mRNA sequence
Length = 848
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 257 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 436
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 437 TQMKELAAFL 466
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 218 KKLCKRGWEC 247
>gb|CN520898.1|CN520898 GQ0107.B3_M07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0107_M07 5', mRNA sequence
Length = 814
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 248 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 427
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 428 TQMKELAAFL 457
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 209 KKLCKRGWEC 238
>gb|DT473400.1|DT473400 WS01229.BR_I17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_I17 5', mRNA sequence
Length = 725
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 250 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 429
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 430 TQMKELAAFL 459
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 211 KKLCKRGWEC 240
>gb|DT476421.1|DT476421 WS01229.B21_I17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01229_I17 3', mRNA sequence
Length = 725
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / -1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 476 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 297
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 296 TQMKELAAFL 267
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / -1
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 515 KKLCKRGWEC 486
>gb|DT500585.1|DT500585 PX0015.BR_O21 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0015_O21
5', mRNA sequence
Length = 680
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 221 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 400
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 401 TQMKELAAFL 430
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 182 KKLCKRGWEC 211
>gb|DT474964.1|DT474964 WS0125.BR_J03 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0125_J03 5', mRNA sequence
Length = 635
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 267 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 446
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 447 TQMKELAAFL 476
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 228 KKLCKRGWEC 257
>gb|CN517305.1|CN517305 GQ0094.B3_O19 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0094_O19 5', mRNA sequence
Length = 566
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 198 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 377
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 378 TQMKELAAFL 407
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 159 KKLCKRGWEC 188
>gb|CB239469.1|CB239469 RSH12B04 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 533
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +2
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 212 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 391
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 392 TQMKELAAFL 421
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +2
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 173 KKLCKRGWEC 202
>gb|AI166930.1|AI166930 xylem.est.713 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 518
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +1
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 196 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 375
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 376 TQMKELAAFL 405
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 157 KKLCKRGWEC 186
>gb|BI139082.1|BI139082 F122P82Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 497
Score = 128 bits (274), Expect(2) = 4e-031
Identities = 48/70 (68%), Positives = 58/70 (82%)
Frame = +2 / +3
Query: 332 SKYCCNDTITDFFKVYQFENLFAKRNTPVAHAVGFWDYQAFITAAALFEPQGFCTTGGKQ 511
S+YCCN+TI+D F+ YQFENLF+ RN+PVAHAVGFWDY++FI A+ F+ GFCTTGGK
Sbjct: 42 SEYCCNETISDIFQPYQFENLFSNRNSPVAHAVGFWDYRSFILASTSFQHLGFCTTGGKA 221
Query: 512 MQMMELCAFL 541
QM EL AFL
Sbjct: 222 TQMKELAAFL 251
Score = 25.8 bits (50), Expect(2) = 4e-031
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = +2 / +3
Query: 296 EKICNKGWEC 325
+K+C +GWEC
Sbjct: 3 KKLCKRGWEC 32
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 162,132,424
Number of Sequences: 369679
Number of extensions: 1768118
Number of successful extensions: 42392
Number of sequences better than 1.0e-020: 144
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 6314454411
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)