TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 4573929.2.1
(691 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV235452.1|CV235452 WS0122.B21_D08 PT-GT-FL-A-3 Populus ... 155 3e-037
gb|DT491082.1|DT491082 WS02546.C21.1_M06 PT-MB-N-A-15 Popul... 155 3e-037
gb|CK096710.1|CK096710 UB23CPH06.3pR Populus active cambium... 155 4e-037
gb|CV225974.1|CV225974 WS0162.B21_O17 PT-DX-A-7 Populus tri... 155 4e-037
gb|CV226133.1|CV226133 WS0163.B21_G06 PT-DX-A-7 Populus tri... 155 4e-037
gb|CV272259.1|CV272259 WS0157.B21_C03 PTxN-IB-A-6 Populus t... 155 4e-037
gb|DT508237.1|DT508237 WS02420.BR_G22 PTxD-ICC-N-A-14 Popul... 155 4e-037
gb|DT512247.1|DT512247 WS02418.B21_M05 PTxD-ICC-N-A-14 Popu... 155 4e-037
gb|DT512853.1|DT512853 WS02420.B21_G22 PTxD-ICC-N-A-14 Popu... 155 4e-037
gb|DT517135.1|DT517135 WS02433.B21_G17 PTxD-ICC-N-A-14 Popu... 155 4e-037
gb|DT517537.1|DT517537 WS02434.B21_J11 PTxD-ICC-N-A-14 Popu... 155 4e-037
gb|CV244248.1|CV244248 WS0254.B21_C07 PT-MB-N-A-15 Populus ... 154 7e-037
gb|BP930850.1|BP930850 BP930850 full-length enriched poplar... 154 7e-037
gb|BI126652.1|BI126652 I078P42P Populus leaf cDNA library P... 153 1e-036
gb|CV232955.1|CV232955 WS0199.B21_D04 PT-DX-N-A-10 Populus ... 152 2e-036
gb|CV268555.1|CV268555 WS0205.B21_M24 PTxN-IB-N-A-11 Populu... 145 3e-034
gb|CV269798.1|CV269798 WS0209.B21_E11 PTxN-IB-N-A-11 Populu... 88 3e-032
gb|BU882175.1|BU882175 UM73TF03 Populus flower cDNA library... 134 8e-032
gb|CV241642.1|CV241642 WS02512.B21_N02 PT-MB-N-A-15 Populus... 82 3e-031
gb|CK092883.1|CK092883 G098P81.3pR Populus tension wood cDN... 130 8e-030
gb|CV245200.1|CV245200 WS0256.B21_M02 PT-MB-N-A-15 Populus ... 129 2e-029
gb|DN492094.1|DN492094 V046C01.3pR Populus male catkins cDN... 129 2e-029
gb|DT492486.1|DT492486 WS02550.C21_N20 PT-MB-N-A-15 Populus... 129 2e-029
gb|DT515569.1|DT515569 WS02427.B21_O20 PTxD-ICC-N-A-14 Popu... 129 2e-029
gb|CN520824.1|CN520824 GQ0108.B3_C02 GQ010 Populus trichoca... 128 4e-029
gb|DT479315.1|DT479315 WS02525.BR_H06 PT-MB-N-A-15 Populus ... 128 4e-029
gb|DT484450.1|DT484450 WS02525.B21_H06 PT-MB-N-A-15 Populus... 128 4e-029
gb|DT505258.1|DT505258 WS01810.C21_H02 PTxD-IL-N-A-9 Populu... 126 2e-028
gb|CV251449.1|CV251449 WS0117.B21_A21 PT-P-FL-A-2 Populus t... 125 3e-028
gb|DT518289.1|DT518289 WS02436.B21_L17 PTxD-ICC-N-A-14 Popu... 125 3e-028
gb|DT518705.1|DT518705 WS02438.B21_P19 PTxD-ICC-N-A-14 Popu... 124 6e-028
gb|DT511066.1|DT511066 WS02429.BR_H10 PTxD-ICC-N-A-14 Popul... 107 8e-023
gb|DT515766.1|DT515766 WS02429.B21.1_H10 PTxD-ICC-N-A-14 Po... 107 8e-023
>gb|CV235452.1|CV235452 WS0122.B21_D08 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0122_D08 3', mRNA sequence
Length = 652
Score = 155 bits (333), Expect = 3e-037
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / -3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 578 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERDLSWK 399
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNSK*TTHP 381
YG++EMCRD WNWASKNPYGY + HP
Sbjct: 398 ANYGVDEMCRDQWNWASKNPYGYGSPDGTN*KFIHP 291
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 334 P*GFLLAQFH*SLHISSTP*FAFQLKSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 513
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 514 AATISRTDVPFPVPKLYTSQPILASES 594
>gb|DT491082.1|DT491082 WS02546.C21.1_M06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02546_M06 3', mRNA sequence
Length = 922
Score = 155 bits (333), Expect = 3e-037
Identities = 64/96 (66%), Positives = 67/96 (69%)
Frame = +1 / -3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 566 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERDLSWK 387
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGSRDNSK*TTHP 381
YG++EMCRD WNWASKNPYGY + HP
Sbjct: 386 ANYGVDEMCRDQWNWASKNPYGYGSPDGTN*KFIHP 279
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 322 P*GFLLAQFH*SLHISSTP*FAFQLKSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 501
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 502 AATISRTDVPFPVPKLYTSQPILASES 582
>gb|CK096710.1|CK096710 UB23CPH06.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB23CPH06 3', mRNA sequence
Length = 875
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / -3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 510 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 331
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 330 ANYGVDEMCRDQWNWASKNPYGY 262
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 266 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 445
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 446 AATISRTDVPFPVPKLYTSQPILASES 526
>gb|CV225974.1|CV225974 WS0162.B21_O17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0162_O17
3', mRNA sequence
Length = 504
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / +1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 40 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERDLSWK 219
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 220 ANYGVDEMCRDQWNWASKNPYGY 288
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / -2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 284 P*GFLLAQFH*SLHISSTP*FAFQLKSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 105
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 104 AATISRTDVPFPVPKLYTSQPILASES 24
>gb|CV226133.1|CV226133 WS0163.B21_G06 PT-DX-A-7 Populus trichocarpa cDNA clone WS0163_G06
3', mRNA sequence
Length = 918
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / -2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 533 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERDLSWK 354
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 353 ANYGVDEMCRDQWNWASKNPYGY 285
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 289 P*GFLLAQFH*SLHISSTP*FAFQLKSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 468
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 469 AATISRTDVPFPVPKLYTSQPILASES 549
>gb|CV272259.1|CV272259 WS0157.B21_C03 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0157_C03 3', mRNA sequence
Length = 696
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / -2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 533 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 354
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 353 ANYGVDEMCRDQWNWASKNPYGY 285
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 289 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 468
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 469 AATISRTDVPFPVPKLYTSQPILASES 549
>gb|DT508237.1|DT508237 WS02420.BR_G22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_G22 5', mRNA sequence
Length = 882
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / +1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 478 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 657
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 658 ANYGVDEMCRDQWNWASKNPYGY 726
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / -2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 722 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 543
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 542 AATISRTDVPFPVPKLYTSQPILASES 462
>gb|DT512247.1|DT512247 WS02418.B21_M05 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02418_M05 3', mRNA sequence
Length = 914
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / -1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 524 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 345
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 344 ANYGVDEMCRDQWNWASKNPYGY 276
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 280 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 459
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 460 AATISRTDVPFPVPKLYTSQPILASES 540
>gb|DT512853.1|DT512853 WS02420.B21_G22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_G22 3', mRNA sequence
Length = 922
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / -3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 494 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 315
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 314 ANYGVDEMCRDQWNWASKNPYGY 246
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 250 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 429
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 430 AATISRTDVPFPVPKLYTSQPILASES 510
>gb|DT517135.1|DT517135 WS02433.B21_G17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_G17 3', mRNA sequence
Length = 881
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / -1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 521 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 342
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 341 ANYGVDEMCRDQWNWASKNPYGY 273
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 277 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 456
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 457 AATISRTDVPFPVPKLYTSQPILASES 537
>gb|DT517537.1|DT517537 WS02434.B21_J11 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_J11 3', mRNA sequence
Length = 794
Score = 155 bits (332), Expect = 4e-037
Identities = 62/83 (74%), Positives = 64/83 (77%)
Frame = +1 / -1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 506 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 327
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 326 ANYGVDEMCRDQWNWASKNPYGY 258
Score = 129 bits (277), Expect = 1e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 262 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 441
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 442 AATISRTDVPFPVPKLYTSQPILASES 522
>gb|CV244248.1|CV244248 WS0254.B21_C07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0254_C07 3', mRNA sequence
Length = 582
Score = 154 bits (330), Expect = 7e-037
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +1 / -3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKAS KKIPLV A RRPGDAEIVY
Sbjct: 460 IGCEVYNLGTGKGTSVLEMVAAFEKASRKKIPLVMAARRPGDAEIVYAATEKAERELNWK 281
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGS 351
YGI+EMCRD WNWA KNPYGY S
Sbjct: 280 AKYGIDEMCRDQWNWAGKNPYGYGSS 203
Score = 128 bits (274), Expect = 4e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +3
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFL AQFH SLHISS+PY TISASPG R A TRGIFF +AFSN
Sbjct: 216 P*GFLPAQFH*SLHISSMPYFAFQFNSRSAFSVAAYTISASPGRRAAITRGIFFLDAFSN 395
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 396 AATISRTDVPFPVPKLYTSQPILASES 476
>gb|BP930850.1|BP930850 BP930850 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-015_L21.r 3', mRNA sequence
Length = 574
Score = 154 bits (330), Expect = 7e-037
Identities = 63/86 (73%), Positives = 64/86 (74%)
Frame = +1 / -1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKAS KKIPLV A RRPGDAEIVY
Sbjct: 472 IGCEVYNLGTGKGTSVLEMVAAFEKASRKKIPLVMAARRPGDAEIVYAATEKAERELNWK 293
Query: 274 XXYGIEEMCRDLWNWASKNPYGYAGS 351
YGI+EMCRD WNWA KNPYGY S
Sbjct: 292 AKYGIDEMCRDQWNWAGKNPYGYGSS 215
Score = 128 bits (274), Expect = 4e-029
Identities = 58/87 (66%), Positives = 61/87 (70%)
Frame = -3 / +3
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFL AQFH SLHISS+PY TISASPG R A TRGIFF +AFSN
Sbjct: 228 P*GFLPAQFH*SLHISSMPYFAFQFNSRSAFSVAAYTISASPGRRAAITRGIFFLDAFSN 407
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 408 AATISRTDVPFPVPKLYTSQPILASES 488
>gb|BI126652.1|BI126652 I078P42P Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 527
Score = 153 bits (328), Expect = 1e-036
Identities = 61/83 (73%), Positives = 64/83 (77%)
Frame = +1 / +3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGK+IPLV A RRPGDAE VY
Sbjct: 216 IGCEVYNLGTGKGTSVLEMVAAFEKASGKEIPLVMADRRPGDAETVYAATEKAERELSWK 395
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD WNWASKNPYGY
Sbjct: 396 ANYGVDEMCRDQWNWASKNPYGY 464
Score = 126 bits (269), Expect = 2e-028
Identities = 57/87 (65%), Positives = 60/87 (68%)
Frame = -3 / -2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGI FP+AFSN
Sbjct: 460 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGISFPDAFSN 281
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 280 AATISRTDVPFPVPKLYTSQPILASES 200
>gb|CV232955.1|CV232955 WS0199.B21_D04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0199_D04 3', mRNA sequence
Length = 542
Score = 152 bits (326), Expect = 2e-036
Identities = 61/83 (73%), Positives = 63/83 (75%)
Frame = +1 / +2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY
Sbjct: 89 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWK 268
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG++EMCRD W WASKNPYGY
Sbjct: 269 ANYGVDEMCRDQWKWASKNPYGY 337
Score = 127 bits (272), Expect = 7e-029
Identities = 57/87 (65%), Positives = 60/87 (68%)
Frame = -3 / -3
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLA FH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 333 P*GFLLAHFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 154
Query: 158 AATISNTDVPFPVPKLYTSQPILSESS 78
AATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 153 AATISRTDVPFPVPKLYTSQPILASES 73
>gb|CV268555.1|CV268555 WS0205.B21_M24 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0205_M24 3', mRNA sequence
Length = 458
Score = 145 bits (311), Expect = 3e-034
Identities = 60/83 (72%), Positives = 61/83 (73%)
Frame = +1 / -3
Query: 103 EVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXY 282
EVYNLGTGKGTSVLEMVAAFEKAS KKIPLV A RRPGDAEIVY Y
Sbjct: 456 EVYNLGTGKGTSVLEMVAAFEKASRKKIPLVMAARRPGDAEIVYAATEKAERELNWKAKY 277
Query: 283 GIEEMCRDLWNWASKNPYGYAGS 351
GI+EMCRD WNWA KNPYGY S
Sbjct: 276 GIDEMCRDQWNWAGKNPYGYGSS 208
Score = 116 bits (249), Expect = 1e-025
Identities = 53/79 (67%), Positives = 55/79 (69%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFL AQFH SLHISS+PY TISASPG R A TRGIFF +AFSN
Sbjct: 221 P*GFLPAQFH*SLHISSMPYFAFQFNSRSAFSVAAYTISASPGRRAAITRGIFFLDAFSN 400
Query: 158 AATISNTDVPFPVPKLYTS 102
AATIS TDVPFPVPKLYTS
Sbjct: 401 AATISRTDVPFPVPKLYTS 457
>gb|CV269798.1|CV269798 WS0209.B21_E11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0209_E11 3', mRNA sequence
Length = 601
Score = 88.1 bits (186), Expect(2) = 3e-032
Identities = 33/55 (60%), Positives = 36/55 (65%)
Frame = +1 / -1
Query: 178 KKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGY 342
+KIPLV A RRPGDAE VY YG++EMCRD WNWASKNPYGY
Sbjct: 421 QKIPLVMADRRPGDAETVYAATEKAERELSWKANYGVDEMCRDQWNWASKNPYGY 257
Score = 70.3 bits (147), Expect(2) = 3e-032
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +1 / -2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGK 180
IGCEVYNLGTGKGTSVLEMVAAFEKASGK
Sbjct: 591 IGCEVYNLGTGKGTSVLEMVAAFEKASGK 505
>gb|BU882175.1|BU882175 UM73TF03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 571
Score = 134 bits (287), Expect(2) = 8e-032
Identities = 54/75 (72%), Positives = 56/75 (74%)
Frame = +1 / +2
Query: 118 GTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEM 297
GTGKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY YG++EM
Sbjct: 23 GTGKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWKANYGVDEM 202
Query: 298 CRDLWNWASKNPYGY 342
CRD WNWASKNPYGY
Sbjct: 203 CRDQWNWASKNPYGY 247
Score = 107 bits (229), Expect = 6e-023
Identities = 48/76 (63%), Positives = 52/76 (68%)
Frame = -3 / -2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 243 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 64
Query: 158 AATISNTDVPFPVPKL 111
AATIS TDVPFPVP++
Sbjct: 63 AATISRTDVPFPVPEV 16
Score = 22.6 bits (43), Expect(2) = 8e-032
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1 / +1
Query: 97 GCEVYNLG 120
GCEVYN G
Sbjct: 1 GCEVYNFG 24
>gb|CV241642.1|CV241642 WS02512.B21_N02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02512_N02 3', mRNA sequence
Length = 735
Score = 82.2 bits (173), Expect(2) = 2e-023
Identities = 33/38 (86%), Positives = 35/38 (92%)
Frame = -3 / +2
Query: 191 RGIFFPEAFSNAATISNTDVPFPVPKLYTSQPILSESS 78
RGIFFP+AFSNAATIS TDVPFPVPKLYTSQPIL+ S
Sbjct: 467 RGIFFPDAFSNAATISRTDVPFPVPKLYTSQPILASES 580
Score = 79.4 bits (167), Expect(2) = 3e-031
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +1 / -1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL 192
IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL
Sbjct: 564 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPL 466
Score = 75.8 bits (159), Expect(2) = 3e-031
Identities = 31/68 (45%), Positives = 36/68 (52%)
Frame = +1 / -2
Query: 178 KKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNPYGYAGSRD 357
+K L+ A RRPGDAE VY YG++EMCRD WNWASKN YGY
Sbjct: 479 RKFLLLMADRRPGDAEPVYAATEKAERDLSWKANYGVDEMCRDQWNWASKNLYGYGSPDG 300
Query: 358 NSK*TTHP 381
+ HP
Sbjct: 299 TN*KFIHP 276
Score = 46.4 bits (95), Expect(2) = 2e-023
Identities = 25/54 (46%), Positives = 27/54 (50%)
Frame = -3 / +1
Query: 341 YPYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIF 180
YP FLLAQFH SLHISS P T SASPG R A ++ F
Sbjct: 316 YP*RFLLAQFH*SLHISSTP*FAFQLKSRSAFSVAAYTGSASPGRRSAISKRNF 477
>gb|CK092883.1|CK092883 G098P81.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G098P81 3', mRNA sequence
Length = 745
Score = 130 bits (279), Expect = 8e-030
Identities = 53/83 (63%), Positives = 56/83 (67%)
Frame = +1 / -1
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GTSVLEMVAAFEKASGKKIP+ RRPGDA VY
Sbjct: 583 IGCIAYNLGTGCGTSVLEMVAAFEKASGKKIPIKLCPRRPGDATAVYASTEKAERELGWK 404
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 403 AKYGVEEMCRDQWKWASNNPWGY 335
Score = 111 bits (237), Expect = 5e-024
Identities = 49/82 (59%), Positives = 52/82 (63%)
Frame = -3 / +3
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N GIF PEAFSN
Sbjct: 339 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLMGIFLPEAFSN 518
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
AATIS+TDVP PVP+LY QPI
Sbjct: 519 AATISSTDVPHPVPRLYAIQPI 584
>gb|CV245200.1|CV245200 WS0256.B21_M02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0256_M02 3', mRNA sequence
Length = 613
Score = 129 bits (276), Expect = 2e-029
Identities = 53/86 (61%), Positives = 56/86 (65%)
Frame = +1 / -2
Query: 85 SDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXX 264
S IGC YNLGTG GTSVLEMV AFEKASGKKIP+ RRPGDA VY
Sbjct: 537 SKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKKIPVKLCPRRPGDATAVYASTEKAEREL 358
Query: 265 XXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 357 GWKAKYGVEEMCRDQWKWASNNPWGY 280
Score = 109 bits (233), Expect = 2e-023
Identities = 48/82 (58%), Positives = 51/82 (62%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N GIF PEAFSN
Sbjct: 284 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLTGIFLPEAFSN 463
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
A TIS+TDVP PVP+LY QPI
Sbjct: 464 AVTISSTDVPHPVPRLYAIQPI 529
>gb|DN492094.1|DN492094 V046C01.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V046C01 3', mRNA sequence
Length = 753
Score = 129 bits (276), Expect = 2e-029
Identities = 53/86 (61%), Positives = 56/86 (65%)
Frame = +1 / -2
Query: 85 SDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXX 264
S IGC YNLGTG GTSVLEMV AFEKASGKKIP+ RRPGDA VY
Sbjct: 500 SKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKKIPVKLCPRRPGDATAVYASTEKAEREL 321
Query: 265 XXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 320 GWKAKYGVEEMCRDQWKWASNNPWGY 243
Score = 109 bits (233), Expect = 2e-023
Identities = 48/82 (58%), Positives = 51/82 (62%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N GIF PEAFSN
Sbjct: 247 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLTGIFLPEAFSN 426
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
A TIS+TDVP PVP+LY QPI
Sbjct: 427 AVTISSTDVPHPVPRLYAIQPI 492
>gb|DT492486.1|DT492486 WS02550.C21_N20 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02550_N20 3', mRNA sequence
Length = 807
Score = 129 bits (276), Expect = 2e-029
Identities = 53/86 (61%), Positives = 56/86 (65%)
Frame = +1 / -1
Query: 85 SDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXX 264
S IGC YNLGTG GTSVLEMV AFEKASGKKIP+ RRPGDA VY
Sbjct: 519 SKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKKIPVKLCPRRPGDATAVYASTEKAEREL 340
Query: 265 XXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 339 GWKAKYGVEEMCRDQWKWASNNPWGY 262
Score = 109 bits (233), Expect = 2e-023
Identities = 48/82 (58%), Positives = 51/82 (62%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N GIF PEAFSN
Sbjct: 266 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLTGIFLPEAFSN 445
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
A TIS+TDVP PVP+LY QPI
Sbjct: 446 AVTISSTDVPHPVPRLYAIQPI 511
>gb|DT515569.1|DT515569 WS02427.B21_O20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_O20 3', mRNA sequence
Length = 495
Score = 129 bits (276), Expect = 2e-029
Identities = 52/73 (71%), Positives = 54/73 (73%)
Frame = +1 / -2
Query: 124 GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCR 303
GKGTSVLEMVAAFEKASGKKIPLV A RRPGDAE VY YG++EMCR
Sbjct: 494 GKGTSVLEMVAAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWKANYGVDEMCR 315
Query: 304 DLWNWASKNPYGY 342
D WNWASKNPYGY
Sbjct: 314 DQWNWASKNPYGY 276
Score = 101 bits (216), Expect = 4e-021
Identities = 46/72 (63%), Positives = 48/72 (66%)
Frame = -3 / +1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFLLAQFH SLHISS P T+SASPG R A TRGIFFP+AFSN
Sbjct: 280 P*GFLLAQFH*SLHISSTP*FAFQLNSRSAFSVAAYTVSASPGRRSAITRGIFFPDAFSN 459
Query: 158 AATISNTDVPFP 123
AATIS TDVPFP
Sbjct: 460 AATISRTDVPFP 495
>gb|CN520824.1|CN520824 GQ0108.B3_C02 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_C02 5', mRNA sequence
Length = 603
Score = 128 bits (274), Expect = 4e-029
Identities = 52/83 (62%), Positives = 55/83 (66%)
Frame = +1 / +2
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
IGC YNLGTG GTSVLEMV AFEKASGKKIP+ RRPGDA VY
Sbjct: 113 IGCIAYNLGTGCGTSVLEMVTAFEKASGKKIPVKLCPRRPGDATAVYASTEKAERELGWK 292
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 293 AKYGVEEMCRDQWKWASNNPWGY 361
Score = 109 bits (233), Expect = 2e-023
Identities = 48/82 (58%), Positives = 51/82 (62%)
Frame = -3 / -1
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N GIF PEAFSN
Sbjct: 357 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLTGIFLPEAFSN 178
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
A TIS+TDVP PVP+LY QPI
Sbjct: 177 AVTISSTDVPHPVPRLYAIQPI 112
>gb|DT479315.1|DT479315 WS02525.BR_H06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_H06 5', mRNA sequence
Length = 431
Score = 128 bits (274), Expect = 4e-029
Identities = 53/76 (69%), Positives = 54/76 (71%)
Frame = +1 / +2
Query: 124 GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCR 303
GKGTSVLEMVAAFEKAS KKIPLV A RRPGDAEIVY YGI+EMCR
Sbjct: 2 GKGTSVLEMVAAFEKASRKKIPLVMAARRPGDAEIVYAATEKAERELNWKAKYGIDEMCR 181
Query: 304 DLWNWASKNPYGYAGS 351
D WNWA KNPYGY S
Sbjct: 182 DQWNWAGKNPYGYGSS 229
Score = 100 bits (213), Expect = 1e-020
Identities = 46/72 (63%), Positives = 48/72 (66%)
Frame = -3 / -3
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFL AQFH SLHISS+PY TISASPG R A TRGIFF +AFSN
Sbjct: 216 P*GFLPAQFH*SLHISSMPYFAFQFNSRSAFSVAAYTISASPGRRAAITRGIFFLDAFSN 37
Query: 158 AATISNTDVPFP 123
AATIS TDVPFP
Sbjct: 36 AATISRTDVPFP 1
>gb|DT484450.1|DT484450 WS02525.B21_H06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02525_H06 3', mRNA sequence
Length = 431
Score = 128 bits (274), Expect = 4e-029
Identities = 53/76 (69%), Positives = 54/76 (71%)
Frame = +1 / -2
Query: 124 GKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCR 303
GKGTSVLEMVAAFEKAS KKIPLV A RRPGDAEIVY YGI+EMCR
Sbjct: 430 GKGTSVLEMVAAFEKASRKKIPLVMAARRPGDAEIVYAATEKAERELNWKAKYGIDEMCR 251
Query: 304 DLWNWASKNPYGYAGS 351
D WNWA KNPYGY S
Sbjct: 250 DQWNWAGKNPYGYGSS 203
Score = 100 bits (213), Expect = 1e-020
Identities = 46/72 (63%), Positives = 48/72 (66%)
Frame = -3 / +3
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P GFL AQFH SLHISS+PY TISASPG R A TRGIFF +AFSN
Sbjct: 216 P*GFLPAQFH*SLHISSMPYFAFQFNSRSAFSVAAYTISASPGRRAAITRGIFFLDAFSN 395
Query: 158 AATISNTDVPFP 123
AATIS TDVPFP
Sbjct: 396 AATISRTDVPFP 431
>gb|DT505258.1|DT505258 WS01810.C21_H02 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01810_H02 3', mRNA sequence
Length = 935
Score = 126 bits (269), Expect = 2e-028
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = +1 / -3
Query: 85 SDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXX 264
S IGC YNLGTG GTSVLEMV AFEKASGK IP+ RRPGDA VY
Sbjct: 549 SKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKIIPIKLCPRRPGDATAVYASTEKAEREL 370
Query: 265 XXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 369 GWKAKYGVEEMCRDQWKWASNNPWGY 292
Score = 106 bits (227), Expect = 1e-022
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N GI PEAFSN
Sbjct: 296 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLMGIILPEAFSN 475
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
A TIS+TDVP PVP+LY QPI
Sbjct: 476 AVTISSTDVPHPVPRLYAIQPI 541
>gb|CV251449.1|CV251449 WS0117.B21_A21 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0117_A21 3', mRNA sequence
Length = 616
Score = 125 bits (267), Expect = 3e-028
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = +1 / -1
Query: 85 SDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXX 264
S IGC YNLGTG GTSVLEMV AFEKASGKKI + RRPGDA VY
Sbjct: 517 SKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKKIHVKLCPRRPGDATAVYASTEKAEREL 338
Query: 265 XXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 337 GWKAKYGVEEMCRDQWKWASNNPWGY 260
Score = 105 bits (225), Expect = 2e-022
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = -3 / +3
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N IF PEAFSN
Sbjct: 264 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLTWIFLPEAFSN 443
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
A TIS+TDVP PVP+LY QPI
Sbjct: 444 AVTISSTDVPHPVPRLYAIQPI 509
>gb|DT518289.1|DT518289 WS02436.B21_L17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02436_L17 3', mRNA sequence
Length = 925
Score = 125 bits (267), Expect = 3e-028
Identities = 52/86 (60%), Positives = 55/86 (63%)
Frame = +1 / -2
Query: 85 SDKIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXX 264
S IGC YNLGTG GTSVLEMV AFEKASGKKI + RRPGDA VY
Sbjct: 537 SKDIGCIAYNLGTGCGTSVLEMVTAFEKASGKKIHVKLCPRRPGDATAVYASTEKAEREL 358
Query: 265 XXXXXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 357 GWKAKYGVEEMCRDQWKWASNNPWGY 280
Score = 105 bits (225), Expect = 2e-022
Identities = 47/82 (57%), Positives = 50/82 (60%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N IF PEAFSN
Sbjct: 284 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLTWIFLPEAFSN 463
Query: 158 AATISNTDVPFPVPKLYTSQPI 93
A TIS+TDVP PVP+LY QPI
Sbjct: 464 AVTISSTDVPHPVPRLYAIQPI 529
>gb|DT518705.1|DT518705 WS02438.B21_P19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_P19 3', mRNA sequence
Length = 875
Score = 124 bits (265), Expect = 6e-028
Identities = 50/83 (60%), Positives = 54/83 (65%)
Frame = +1 / -3
Query: 94 IGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXX 273
+GC YNLGTG GTSVLEMV AFEKASGK IP+ RRPGDA VY
Sbjct: 528 LGCIAYNLGTGCGTSVLEMVTAFEKASGKIIPIKLCPRRPGDATAVYASTEKAERELGWK 349
Query: 274 XXYGIEEMCRDLWNWASKNPYGY 342
YG+EEMCRD W WAS NP+GY
Sbjct: 348 AKYGVEEMCRDQWKWASNNPWGY 280
Score = 105 bits (224), Expect = 3e-022
Identities = 47/85 (55%), Positives = 51/85 (60%)
Frame = -3 / +2
Query: 338 PYGFLLAQFHRSLHISSIPYXXXXXXXXXXXXXXX*TISASPGLRPANTRGIFFPEAFSN 159
P+G LLA FH SLHISS PY T ASPGLR N GI PEAFSN
Sbjct: 284 PHGLLLAHFHWSLHISSTPYFAFQPSSLSAFSVEAYTAVASPGLRGHNLMGIILPEAFSN 463
Query: 158 AATISNTDVPFPVPKLYTSQPILSE 84
A TIS+TDVP PVP+LY QP S+
Sbjct: 464 AVTISSTDVPHPVPRLYAIQPNTSK 538
>gb|DT511066.1|DT511066 WS02429.BR_H10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_H10 5', mRNA sequence
Length = 465
Score = 107 bits (228), Expect = 8e-023
Identities = 42/63 (66%), Positives = 44/63 (69%)
Frame = +1 / +1
Query: 154 AAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNP 333
AAFEKASGKKIPLV A RRPGDAE VY YG++EMCRD WNWASKNP
Sbjct: 1 AAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWKANYGVDEMCRDQWNWASKNP 180
Query: 334 YGY 342
YGY
Sbjct: 181 YGY 189
>gb|DT515766.1|DT515766 WS02429.B21.1_H10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_H10 3', mRNA sequence
Length = 465
Score = 107 bits (228), Expect = 8e-023
Identities = 42/63 (66%), Positives = 44/63 (69%)
Frame = +1 / -1
Query: 154 AAFEKASGKKIPLVFAGRRPGDAEIVYXXXXXXXXXXXXXXXYGIEEMCRDLWNWASKNP 333
AAFEKASGKKIPLV A RRPGDAE VY YG++EMCRD WNWASKNP
Sbjct: 465 AAFEKASGKKIPLVMADRRPGDAETVYAATEKAERELSWKANYGVDEMCRDQWNWASKNP 286
Query: 334 YGY 342
YGY
Sbjct: 285 YGY 277
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 318,704,226
Number of Sequences: 369679
Number of extensions: 4541408
Number of successful extensions: 56394
Number of sequences better than 1.0e-020: 35
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 8598585660
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)