TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3871923.2.1
(1030 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN503442.1|DN503442 Y016A06.5pR Populus infected leaf su... 303 e-122
gb|DT476199.1|DT476199 WS01228.B21_K23 PT-GT-FL-A-3 Populus... 341 1e-095
gb|CA923792.1|CA923792 MTU7CL.P15.A06 Aspen leaf cDNA Libra... 321 2e-091
gb|CV242314.1|CV242314 WS02514.B21.1_L16 PT-MB-N-A-15 Popul... 241 2e-075
gb|DT526747.1|DT526747 WS02048.C21_N18 PTxN-IB-N-A-11 Popul... 159 2e-063
gb|CK089734.1|CK089734 C030P12.3pR Populus strain T89 leave... 240 1e-062
gb|CV264688.1|CV264688 WS02025.B21_D03 PTxN-IB-N-A-11 Popul... 191 5e-058
gb|CN517495.1|CN517495 GQ0092.B3_O17 GQ009 Populus trichoca... 218 4e-056
gb|CV264913.1|CV264913 WS02025.B21_N09 PTxN-IB-N-A-11 Popul... 172 3e-052
gb|CV238436.1|CV238436 WS0126.B21_K06 PT-GT-FL-A-3 Populus ... 204 1e-051
gb|DT493142.1|DT493142 WS02553.C21_I10 PT-MB-N-A-15 Populus... 146 4e-046
gb|DT524332.1|DT524332 WS02042.C21.1_F13 PTxN-IB-N-A-11 Pop... 101 9e-045
gb|DN493450.1|DN493450 Y016A06.3pR Populus infected leaf su... 155 1e-043
gb|CX176614.1|CX176614 C10_69-38_06.ab1 leaf inoculated wit... 90 6e-041
gb|CX171013.1|CX171013 E12_69-102_10.ab1 leaf inoculated wi... 86 1e-039
gb|CK096273.1|CK096273 UA54DPC10.3pR Populus dormant cambiu... 133 1e-033
gb|CK115842.1|CK115842 Y016A06 Populus infected leaf substr... 115 4e-025
>gb|DN503442.1|DN503442 Y016A06.5pR Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y016A06 5', mRNA sequence
Length = 832
Score = 303 bits (657), Expect(2) = e-122
Identities = 123/150 (82%), Positives = 130/150 (86%)
Frame = +2 / +1
Query: 173 GFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYF 352
GFVTFMSIGGFPSFVEEMKVFQRERLNGHYGV AFVISNTISA PFLI+I F+SGT+CYF
Sbjct: 1 GFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVVAFVISNTISAMPFLIMITFISGTVCYF 180
Query: 353 MVRLHPGFEHYIFFVLNLYASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYF 532
MVRLHPGFEHY+FFVL LYASVTVVESLMM IAS++PNFLM FMLVSGYF
Sbjct: 181 MVRLHPGFEHYVFFVLCLYASVTVVESLMMTIASIVPNFLMGIIIGAGIQGIFMLVSGYF 360
Query: 533 RLPYDIPKPFWRYPMQYISFHYWALQGQCQ 622
RLP DIPKP WRYPM YISFH+WALQGQ Q
Sbjct: 361 RLPNDIPKPVWRYPMSYISFHFWALQGQYQ 450
Score = 164 bits (353), Expect(3) = 2e-068
Identities = 74/98 (75%), Positives = 79/98 (80%)
Frame = -2 / -3
Query: 471 RKFGMTLAIAIIKLSTTVTLAYRFKTKKM*CSKPGWRRTMK*HMVPDKKHIRIRNGVAEM 292
RK G LA+ IIKLSTTVTLA R TKK *CS PG RRTMK* VP+ K I IRNG+AEM
Sbjct: 299 RKLGTMLAMVIIKLSTTVTLA*RHSTKKT*CSNPG*RRTMK*QTVPEIKVIIIRNGIAEM 120
Query: 291 VLLMTNAATP*CPFSRSRWKTFISSTNEGNPPMDMNVT 178
VLL+TNA TP*CPFS S WKTFISST EGNPP+DMNVT
Sbjct: 119 VLLITNATTP*CPFSLSLWKTFISSTKEGNPPIDMNVT 6
Score = 155 bits (333), Expect(2) = e-122
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +2 / +3
Query: 611 GQCQNDMKGLAVDNQDPDQPKIPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFL 790
G ND+KGL DNQ PD PKIPG++IL+YIFQI+V RSKW+DLSVIFSMI IYRI+FF
Sbjct: 438 GTIPNDLKGLLFDNQSPDLPKIPGEYILEYIFQIDVHRSKWVDLSVIFSMIVIYRIIFFF 617
Query: 791 MIKINEDXLPWIRGHIARKRMQKKGPTPTMGKTP 892
MIKI+ED PWIRG+IA++RMQ+K T P
Sbjct: 618 MIKISEDITPWIRGYIAKRRMQQKNGTQNTTVAP 719
Score = 139 bits (299), Expect(2) = 1e-034
Identities = 64/149 (42%), Positives = 90/149 (60%)
Frame = -1 / -2
Query: 622 LALALQCPVVEADVLHGVSPKGLRDVVWKSEVARDQHEYSLNPGPYDDTHEEIWNDTGNR 443
L L+L P VEA+V H VSP L V+W+ +V R HEYSLN P DD HEEI ++ G
Sbjct: 450 LVLSL*SPEVEANVRHWVSPHRLWYVIWEPKVPRH*HEYSLNSSPNDDAHEEIRDNAGYG 271
Query: 442 HHQALDHRNAGXXXXXXXXXVLEARMEAHHEVAYGSRQEAYQNQERRG*DGVADDKRRDT 263
HHQA ++ + + ++ M+A HE+ SR ++Y QER +GVA+ +
Sbjct: 270 HHQAFNYGDTRIKAQHEENIMFKSWMKADHEITNSSRNKSYHYQERHCRNGVANHECDHA 91
Query: 262 VVPVQPFPLEDLHFFNERRESSNGHERNE 176
+VP+ PF LEDLHF + R+ +N HER+E
Sbjct: 90 IVPI*PFSLEDLHFLYKGRKPTN*HERDE 4
Score = 138 bits (297), Expect(2) = 6e-034
Identities = 65/148 (43%), Positives = 88/148 (59%)
Frame = +1 / +3
Query: 178 RYVHVHWRIPFVR*RNEGLPAGTAERALRCRGVCHQQHHLSHAVPDSDMLLVGNHMLLHG 357
R+VHV+W + F+ NEGLP A+ AL + QHH +AVPD+D N +L HG
Sbjct: 6 RHVHVNWWVSFLCRGNEGLPKRKAKWALWRGRIRD*QHHFCNAVPDNDNFYFWNCLLFHG 185
Query: 358 APPSWLRALHLLRLEPVRQRYGGRELDDGDCQCHSKFPHGYHHRGRDSGNIHAGLWLLQT 537
P S + L LR P+ + + +LDD Q FPHG+HH G +SGNIHA +W+L
Sbjct: 186 PPSSRI*TLCFLRAVPLCECHRS*KLDDDHSQHCP*FPHGHHHWGWNSGNIHASVWVL*A 365
Query: 538 SIRHPEALLEIPHAVHQLPLLGTAGPVP 621
H +A +EIP+ VH LPLLG+ G +P
Sbjct: 366 PK*HTKACVEIPNVVH*LPLLGSTGTIP 449
Score = 68.9 bits (144), Expect(3) = 2e-068
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = -2 / -3
Query: 633 FMSFWHWPCSAQ*WKLMYCMGYLQKGFGMSYGSLK*PETS 514
F W+ PC AQ WKLMY +GYL GFGMS+GSLK P+TS
Sbjct: 461 FQIIWYCPCRAQKWKLMYDIGYLHTGFGMSFGSLKYPDTS 342
Score = 65.7 bits (137), Expect(3) = 2e-068
Identities = 27/42 (64%), Positives = 29/42 (69%)
Frame = -2 / -1
Query: 747 TDRSIHLERSTLIWKMYLRMKSPGILGWSGSWLSTARPFMSF 622
T RS HL+R T IW MY M SPGILG SG WLS + PF SF
Sbjct: 574 TLRSTHLDRCTSIWNMYSSMYSPGILGRSGDWLSNSNPFKSF 449
Score = 27.2 bits (53), Expect(2) = 1e-034
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1 / -3
Query: 751 NDRQVDPLGTVHVDLEDVLE 692
ND ++ P G VH++LE V +
Sbjct: 578 NDAEIYPFGPVHINLEYVFQ 519
Score = 25.8 bits (50), Expect(2) = 6e-034
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +1 / +2
Query: 685 LHPQVHLPDQRGPFQVDRPVGHF 753
+H +H+PD P Q+ R HF
Sbjct: 512 VHTGIHIPD*CAPVQMGRSQRHF 580
>gb|DT476199.1|DT476199 WS01228.B21_K23 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01228_K23 3', mRNA sequence
Length = 941
Score = 341 bits (740), Expect(2) = 1e-095
Identities = 136/189 (71%), Positives = 155/189 (82%)
Frame = +2 / -2
Query: 326 FLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIASVIPNFLMXXXXXXXXXX 505
F+SGT+CYFMVRLHPGFEHY+FFVL LYASVTVVESLMM IAS++PNFLM
Sbjct: 889 FISGTVCYFMVRLHPGFEHYVFFVLCLYASVTVVESLMMTIASIVPNFLMGIIIGAGIQG 710
Query: 506 XFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDMKGLAVDNQDPDQPKIPGD 685
FMLVSGYFRLP DIPKP WRYPM YISFH+WALQGQ QND+KGL DNQ PD PKIPG+
Sbjct: 709 IFMLVSGYFRLPNDIPKPVWRYPMSYISFHFWALQGQYQNDLKGLLFDNQSPDLPKIPGE 530
Query: 686 FILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWIRGHIARKRMQKKG 865
+IL+ IFQI+V RSKW+DLSVIFSMI IYRI+FF+MIKI+ED PWIRG+IA++RMQ+K
Sbjct: 529 YILENIFQIDVHRSKWVDLSVIFSMIVIYRIIFFIMIKISEDITPWIRGYIAKRRMQQKN 350
Query: 866 PTPTMGKTP 892
T P
Sbjct: 349 GTQNTTVAP 323
Score = 128 bits (274), Expect(3) = 8e-047
Identities = 51/78 (65%), Positives = 58/78 (74%)
Frame = -2 / +3
Query: 747 TDRSIHLERSTLIWKMYLRMKSPGILGWSGSWLSTARPFMSFWHWPCSAQ*WKLMYCMGY 568
T RS HL+R T IW M+ M SPGILG SG WLS + PF SFW+ PC AQ WKLMY +GY
Sbjct: 468 TLRSTHLDRCTSIWNMFSNMYSPGILGRSGDWLSNSNPFKSFWYCPCRAQKWKLMYDIGY 647
Query: 567 LQKGFGMSYGSLK*PETS 514
L GFGMS+GSLK P+TS
Sbjct: 648 LHTGFGMSFGSLKYPDTS 701
Score = 94.1 bits (199), Expect(2) = 2e-021
Identities = 42/96 (43%), Positives = 59/96 (61%)
Frame = +1 / -1
Query: 337 NHMLLHGAPPSWLRALHLLRLEPVRQRYGGRELDDGDCQCHSKFPHGYHHRGRDSGNIHA 516
N +L HG P S + L LR P+ + + +LDD Q FPHG++H G +SGNIHA
Sbjct: 878 NCLLFHGPPSSRI*TLCFLRAVPLCECHRS*KLDDDHSQHCP*FPHGHYHWGWNSGNIHA 699
Query: 517 GLWLLQTSIRHPEALLEIPHAVHQLPLLGTAGPVPE 624
+W+L H +A +EIP+ VH LPLLG+ G +P+
Sbjct: 698 SIWVL*APK*HTKACVEIPNVVH*LPLLGSTGTIPK 591
Score = 70.7 bits (148), Expect(3) = 8e-047
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = -2 / +3
Query: 471 RKFGMTLAIAIIKLSTTVTLAYRFKTKKM*CSKPGWRRTMK*HMVPDKK 325
RK G LA+ IIKLSTTVTLA R TKK *CS PG RRTMK* VP+ K
Sbjct: 744 RKLGTMLAMVIIKLSTTVTLA*RHSTKKT*CSNPG*RRTMK*QTVPEIK 890
Score = 29.5 bits (58), Expect(2) = 1e-095
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +2 / -3
Query: 275 FVISNTISATPFLILI 322
FVISNTISA FLI+I
Sbjct: 939 FVISNTISAMRFLIMI 892
Score = 28.6 bits (56), Expect(2) = 2e-021
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1 / -2
Query: 274 VCHQQHHLSHAVPDSDMLLVG 336
+C QHH +A PD+D + G
Sbjct: 940 ICD*QHHFCNAFPDNDTFISG 878
Score = 27.2 bits (53), Expect(3) = 8e-047
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -2 / +2
Query: 327 KHIRIRNGVAEMVLLMTN 274
K I IR +AEMVLL+TN
Sbjct: 887 KSIIIRKRIAEMVLLITN 940
>gb|CA923792.1|CA923792 MTU7CL.P15.A06 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 704
Score = 321 bits (695), Expect(2) = 2e-091
Identities = 131/162 (80%), Positives = 141/162 (87%)
Frame = +2 / -1
Query: 92 CIGTIYLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVA 271
CIGTIYL+VGT Y SILAR +C++FVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVA
Sbjct: 488 CIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVA 309
Query: 272 AFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIA 451
AFVISNTISA PFLI+I F+SGT+CYFMVRLHPGFEHY+FFVL LYASV VVESLMM IA
Sbjct: 308 AFVISNTISAMPFLIMITFISGTVCYFMVRLHPGFEHYVFFVLCLYASVAVVESLMMTIA 129
Query: 452 SVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPM 577
S++PNFLM FMLVSGYFRLP DIPKP WRYPM
Sbjct: 128 SIVPNFLMGIIIGAGIQGIFMLVSGYFRLPNDIPKPVWRYPM 3
Score = 201 bits (434), Expect(3) = 3e-060
Identities = 93/130 (71%), Positives = 101/130 (77%)
Frame = -2 / +1
Query: 471 RKFGMTLAIAIIKLSTTVTLAYRFKTKKM*CSKPGWRRTMK*HMVPDKKHIRIRNGVAEM 292
RK G LA+ IIKLSTT TLA R TKK *CS PG RRTMK* VP+ K I IRNG+AEM
Sbjct: 109 RKLGTMLAMVIIKLSTTATLA*RHSTKKT*CSNPG*RRTMK*QTVPEIKVIIIRNGIAEM 288
Query: 291 VLLMTNAATP*CPFSRSRWKTFISSTNEGNPPMDMNVTNPKTNAEQAALARMDVYLVPTS 112
VLL+TNAATP*CPFS S WKTFISST EGNPP+DMNVT PKTN LA +++ VPT
Sbjct: 289 VLLITNAATP*CPFSLSLWKTFISSTKEGNPPIDMNVTKPKTNEAHDPLASIEL*PVPTL 468
Query: 111 R*IVPMQTVT 82
R*IVPMQTVT
Sbjct: 469 R*IVPMQTVT 498
Score = 149 bits (319), Expect = 4e-035
Identities = 68/169 (40%), Positives = 99/169 (58%)
Frame = -1 / +3
Query: 577 HGVSPKGLRDVVWKSEVARDQHEYSLNPGPYDDTHEEIWNDTGNRHHQALDHRNAGXXXX 398
H VSP L V+W+ +VAR HEYSLN P DD HEEI ++ G HHQA ++ +
Sbjct: 3 HWVSPHRLWYVIWEPKVARH*HEYSLNSSPNDDAHEEIRDNAGYGHHQAFNYGDTRIKAQ 182
Query: 397 XXXXXVLEARMEAHHEVAYGSRQEAYQNQERRG*DGVADDKRRDTVVPVQPFPLEDLHFF 218
+ ++ M+A HE+ SR ++Y QER +GVA+ + T+VP+ PF LEDLHF
Sbjct: 183 HEENIMFKSWMKADHEITNSSRNKSYHYQERHCRNGVANHECGHTIVPI*PFSLEDLHFL 362
Query: 217 NERRESSNGHERNEPKDERGAGSPGQDGCVFGADVQVDRADANGDEEVN 71
+ R+ +N HER+E KD+ G Q V V++D ++A+ D +N
Sbjct: 363 YKGRKPTN*HERDETKDK*GTRPSCQYRIVTRPHVEIDSSNADSDHNIN 509
Score = 130 bits (278), Expect(2) = 3e-031
Identities = 61/150 (40%), Positives = 85/150 (56%)
Frame = +1 / -3
Query: 127 IHIHPGQGCLLRVRLWVRYVHVHWRIPFVR*RNEGLPAGTAERALRCRGVCHQQHHLSHA 306
+ + G+ + + LW R+VHV+W + F+ NEGLP A+ AL C + QHH +A
Sbjct: 453 LQFYTGKRVVCLICLWFRHVHVNWWVSFLCRGNEGLPKRKAKWALWCGRIRD*QHHFCNA 274
Query: 307 VPDSDMLLVGNHMLLHGAPPSWLRALHLLRLEPVRQRYGGRELDDGDCQCHSKFPHGYHH 486
VPD+D N +L HG P S + L LR P+ + +LDD Q FPHG+HH
Sbjct: 273 VPDNDNFYFWNCLLFHGPPSSRI*TLCFLRAVPLCECRRS*KLDDDHSQHCP*FPHGHHH 94
Query: 487 RGRDSGNIHAGLWLLQTSIRHPEALLEIPH 576
G +SGNIHA +WLL H +A +EIP+
Sbjct: 93 WGWNSGNIHASVWLL*APK*HTKACVEIPN 4
Score = 41.8 bits (85), Expect(3) = 3e-060
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -2 / +1
Query: 576 MGYLQKGFGMSYGSLK*PETS 514
+GYL GFGMS+GSLK*P+TS
Sbjct: 4 IGYLHTGFGMSFGSLK*PDTS 66
Score = 35.9 bits (72), Expect(2) = 2e-091
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / -1
Query: 1 ACTLTXRSFINMSRDFG 51
A TLT RSFINMSRDFG
Sbjct: 581 AFTLTKRSFINMSRDFG 531
Score = 28.1 bits (55), Expect(3) = 3e-060
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / +1
Query: 50 PKSRDMLMKERLVRVQ 3
PKS DMLM ER V+V+
Sbjct: 532 PKSLDMLMNERFVKVK 579
Score = 25.8 bits (50), Expect(2) = 3e-031
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3 / -3
Query: 3 LHPDQXLLHQHVAGLW 50
L+ ++ +HQHV GLW
Sbjct: 579 LYFNKAFVHQHVKGLW 532
>gb|CV242314.1|CV242314 WS02514.B21.1_L16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_L16 3', mRNA sequence
Length = 908
Score = 241 bits (520), Expect(3) = 2e-075
Identities = 94/193 (48%), Positives = 132/193 (68%)
Frame = +2 / -3
Query: 95 IGTIYLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVAA 274
+ T++ ++G+ SI R + F+ F+TFM+IGGFPSFVE+MKVF+RERLNGHYG A
Sbjct: 729 LATLFYNLGSDNDSIQDRGSLLMFIASFLTFMTIGGFPSFVEDMKVFERERLNGHYGATA 550
Query: 275 FVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIAS 454
FV NT SA P+L+LI + G I Y++ LH G+E +I+FVL L+A + +VESLMM +AS
Sbjct: 549 FVFGNTFSAFPYLLLISVIPGAITYYLPGLHKGYEQFIYFVLVLFACMMLVESLMMTVAS 370
Query: 455 VIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDMK 634
++PNFLM +L G+FRLP D+P+PFW+YPM YI+FH +A QG +N+ +
Sbjct: 369 MVPNFLMGIITGAGIQAFMVLGGGFFRLPNDLPQPFWKYPMYYIAFHKYAYQGMFKNEFE 190
Query: 635 GLAVDNQDPDQPK 673
GL + P+
Sbjct: 189 GLTFPSNQAGGPR 151
Score = 64.3 bits (134), Expect(3) = 1e-023
Identities = 32/67 (47%), Positives = 37/67 (55%)
Frame = -2 / +2
Query: 342 MVPDKKHIRIRNGVAEMVLLMTNAATP*CPFSRSRWKTFISSTNEGNPPMDMNVTNPKTN 163
+ P I R G AE VL T A P*CPF+ S TFISST EGNPP+ MNV N
Sbjct: 482 IAPGITDISNRYGKAENVLPKTKAVAP*CPFNLSLSNTFISSTKEGNPPIVMNVKKEAMN 661
Query: 162 AEQAALA 142
+ L+
Sbjct: 662 ISREPLS 682
Score = 61.6 bits (128), Expect(3) = 1e-023
Identities = 26/71 (36%), Positives = 44/71 (61%)
Frame = -1 / +1
Query: 625 VLALALQCPVVEADVLHGVSPKGLRDVVWKSEVARDQHEYSLNPGPYDDTHEEIWNDTGN 446
VL +L ++E +V+HG+ P+ LR+++W+S+ + SLNP +H++IW+ T N
Sbjct: 199 VLEHSLVGILMEGNVVHGILPEWLREIIWQSKEPPT*NHESLNPSSCYYSHQKIWHHTRN 378
Query: 445 RHHQALDHRNA 413
HH AL +A
Sbjct: 379 GHH*ALHQHHA 411
Score = 57.9 bits (120), Expect(3) = 2e-021
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = -1 / +1
Query: 349 VAYGSRQEAYQNQERRG*DGVADDKRRDTVVPVQPFPLEDLHFFNERRESSNGHERNE 176
++Y SR YQ Q +G + VA +K T+VP+ PF + LH F++RRESS+ HER E
Sbjct: 475 ISYCSRNY*YQ*QVWKGGECVAKNKSSGTIVPI*PFSFKYLHIFHKRRESSDCHER*E 648
Score = 54.7 bits (113), Expect(3) = 2e-075
Identities = 21/50 (42%), Positives = 34/50 (68%)
Frame = +2 / -3
Query: 650 NQDPDQPKIPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIK 799
NQ IPG+ IL+ +Q+ + SKW+DL+++ M+ +YRILF ++IK
Sbjct: 171 NQAGGPRTIPGEQILRDRWQVEMGVSKWVDLAILLGMVVLYRILFLVIIK 22
Score = 41.8 bits (85), Expect(3) = 2e-021
Identities = 20/34 (58%), Positives = 21/34 (61%)
Frame = -2 / +2
Query: 471 RKFGMTLAIAIIKLSTTVTLAYRFKTKKM*CSKP 370
RKFG LA IIKLST + A KTK M CS P
Sbjct: 353 RKFGTILATVIIKLSTNIMQANNTKTKYMNCSYP 454
Score = 40.5 bits (82), Expect(3) = 2e-021
Identities = 20/43 (46%), Positives = 23/43 (53%)
Frame = -2 / +2
Query: 651 LSTARPFMSFWHWPCSAQ*WKLMYCMGYLQKGFGMSYGSLK*P 523
L P SF + P A WK M MGY Q G G S+G+LK P
Sbjct: 173 LGNVSPSNSFLNIPW*AYLWKAM*YMGYFQNG*GRSFGNLKNP 301
Score = 26.7 bits (52), Expect(3) = 2e-075
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +1 / -3
Query: 10 LTXRSFINMSRDFG 51
LT RSF+NM RD G
Sbjct: 816 LTRRSFVNMYRDLG 775
Score = 22.1 bits (42), Expect(3) = 1e-023
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -2 / +2
Query: 741 RSIHLERSTLIWKMYLRMKSPGIL 670
RS HLE LR+ SPGI+
Sbjct: 80 RSTHLETPISTCHRSLRICSPGIV 151
>gb|DT526747.1|DT526747 WS02048.C21_N18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02048_N18 3', mRNA sequence
Length = 894
Score = 159 bits (342), Expect(2) = 2e-063
Identities = 64/95 (67%), Positives = 77/95 (81%)
Frame = +2 / -2
Query: 608 QGQCQNDMKGLAVDNQDPDQPKIPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFF 787
QGQ QND+KGL DNQ PD PKIPG++IL+ IFQI+V RSKW+DLSVIFSMI IYRI+FF
Sbjct: 608 QGQYQNDLKGLLFDNQSPDLPKIPGEYILENIFQIDVHRSKWVDLSVIFSMIVIYRIIFF 429
Query: 788 LMIKINEDXLPWIRGHIARKRMQKKGPTPTMGKTP 892
+MIKI+ED PWIRG+IA++RMQ+K T P
Sbjct: 428 IMIKISEDITPWIRGYIAKRRMQQKNGTQNTTVAP 324
Score = 104 bits (221), Expect(2) = 2e-063
Identities = 40/58 (68%), Positives = 43/58 (74%)
Frame = +2 / -1
Query: 437 MMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQ 610
MM IAS++PNFLM FMLVSGYFRLP DIPKP WRYPM YISFH+WALQ
Sbjct: 894 MMTIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPNDIPKPVWRYPMSYISFHFWALQ 721
Score = 72.1 bits (151), Expect(2) = 2e-025
Identities = 28/46 (60%), Positives = 32/46 (69%)
Frame = -2 / +1
Query: 747 TDRSIHLERSTLIWKMYLRMKSPGILGWSGSWLSTARPFMSFWHWP 610
T RS HL+R T IW M+ M SPGILG SG WLS + PF SFW+ P
Sbjct: 469 TLRSTHLDRCTSIWNMFSSMYSPGILGRSGDWLSNSNPFKSFWYCP 606
Score = 67.0 bits (140), Expect(2) = 2e-025
Identities = 29/55 (52%), Positives = 36/55 (65%)
Frame = -1 / +1
Query: 601 PVVEADVLHGVSPKGLRDVVWKSEVARDQHEYSLNPGPYDDTHEEIWNDTGNRHH 437
P VEA+V H VSP L V+W+ +V R HEYSLN P D+ HEEI ++ G HH
Sbjct: 730 PEVEANVRHWVSPYRLWYVIWEPKVPRY*HEYSLNSSPNDNAHEEIRDNAGYGHH 894
>gb|CK089734.1|CK089734 C030P12.3pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C030P12 3', mRNA sequence
Length = 709
Score = 240 bits (519), Expect = 1e-062
Identities = 94/128 (73%), Positives = 107/128 (83%)
Frame = +2 / -2
Query: 509 FMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDMKGLAVDNQDPDQPKIPGDF 688
FMLVSGYFRLP DIPKP WRYPM YISFH+WALQGQ QND+KGL DNQ PD PKIPG++
Sbjct: 708 FMLVSGYFRLPNDIPKPVWRYPMSYISFHFWALQGQYQNDLKGLLFDNQSPDLPKIPGEY 529
Query: 689 ILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWIRGHIARKRMQKKGP 868
IL+YIFQI+V RSKW+DLSVIFSMI IYRI+FF MIKI+ED PWIRG+IA++RMQ+K
Sbjct: 528 ILEYIFQIDVHRSKWVDLSVIFSMIVIYRIIFFFMIKISEDITPWIRGYIAKRRMQQKNG 349
Query: 869 TPTMGKTP 892
T P
Sbjct: 348 TQNTTVAP 325
Score = 132 bits (282), Expect = 5e-030
Identities = 53/78 (67%), Positives = 59/78 (75%)
Frame = -2 / +2
Query: 747 TDRSIHLERSTLIWKMYLRMKSPGILGWSGSWLSTARPFMSFWHWPCSAQ*WKLMYCMGY 568
T RS HL+R T IW MY M SPGILG SG WLS + PF SFW+ PC AQ WKLMY +GY
Sbjct: 470 TLRSTHLDRCTSIWNMYSSMYSPGILGRSGDWLSNSNPFKSFWYCPCRAQKWKLMYDIGY 649
Query: 567 LQKGFGMSYGSLK*PETS 514
L GFGMS+GSLK*P+TS
Sbjct: 650 LHTGFGMSFGSLK*PDTS 703
>gb|CV264688.1|CV264688 WS02025.B21_D03 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02025_D03 3', mRNA sequence
Length = 838
Score = 191 bits (412), Expect(2) = 5e-058
Identities = 71/144 (49%), Positives = 98/144 (68%)
Frame = +2 / -3
Query: 221 EMKVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVL 400
EMKVF+RERLNGHYG +F I NT SA PFL+LI + G I Y+ LH G+EH+++F
Sbjct: 836 EMKVFERERLNGHYGATSFAIGNTFSAIPFLLLISLIPGAIAYYPSGLHKGYEHFLYFAS 657
Query: 401 NLYASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQ 580
L+A + +VES+MMA+AS++PN+LM L G+FRLP D+PKPFW+YP+
Sbjct: 656 TLFACLLMVESMMMAVASIVPNYLMGIITGAGIQGLMALGGGFFRLPDDLPKPFWKYPLY 477
Query: 581 YISFHYWALQGQCQNDMKGLAVDN 652
Y++FH + QG +N+ +GL N
Sbjct: 476 YVAFHRYTYQGMFKNEFEGLKFTN 405
Score = 53.8 bits (111), Expect(2) = 5e-058
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2 / -3
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWIRG 832
I G+ IL+ +Q+ + SKW+DL+++ M+ YR+LF +IK E P I G
Sbjct: 386 IKGEEILREFWQMEMAYSKWVDLAILLGMVVFYRLLFLAIIKTTETIKPIIPG 228
>gb|CN517495.1|CN517495 GQ0092.B3_O17 GQ009 Populus trichocarpa x Populus deltoides cDNA
clone GQ0092_O17 5', mRNA sequence
Length = 552
Score = 218 bits (471), Expect = 4e-056
Identities = 83/156 (53%), Positives = 111/156 (71%)
Frame = +2 / +1
Query: 185 FMSIGGFPSFVEEMKVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRL 364
FM+IGGFPSFVEEMKVF+RERLNGHYG +F I NT SA PFL+LI + G I Y+ L
Sbjct: 1 FMAIGGFPSFVEEMKVFERERLNGHYGATSFAIGNTFSAIPFLLLISLIPGAIAYYPSGL 180
Query: 365 HPGFEHYIFFVLNLYASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPY 544
H G+EH+++F L+A + +VES+MMA+AS++PNFLM +L G+FRLP
Sbjct: 181 HKGYEHFLYFASTLFACLIMVESMMMAVASIVPNFLMGIITGAGIQGLMVLGGGFFRLPD 360
Query: 545 DIPKPFWRYPMQYISFHYWALQGQCQNDMKGLAVDN 652
D+PK FW+YP+ Y++FH +A QG +N+ +GL N
Sbjct: 361 DLPKLFWKYPLYYVAFHRYAYQGMFKNEFEGLKFTN 468
>gb|CV264913.1|CV264913 WS02025.B21_N09 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02025_N09 3', mRNA sequence
Length = 810
Score = 172 bits (370), Expect(2) = 3e-052
Identities = 63/135 (46%), Positives = 89/135 (65%)
Frame = +2 / -2
Query: 248 LNGHYGVAAFVISNTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVV 427
LNGHYG +F I NT SA PFL+LI + G I Y+ LH G+EH+++F L+A + +V
Sbjct: 809 LNGHYGATSFAIGNTFSAIPFLLLISLIPGAIAYYPSGLHKGYEHFLYFASTLFACLLMV 630
Query: 428 ESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWAL 607
ES+MMA+AS++PN+LM L G+FRLP D+PKPFW+YP+ Y++FH +
Sbjct: 629 ESMMMAVASIVPNYLMGIITGAGIQGLMALGGGFFRLPDDLPKPFWKYPLYYVAFHRYTY 450
Query: 608 QGQCQNDMKGLAVDN 652
QG +N+ +GL N
Sbjct: 449 QGMFKNEFEGLKFTN 405
Score = 53.8 bits (111), Expect(2) = 3e-052
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +2 / -2
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWIRG 832
I G+ IL+ +Q+ + SKW+DL+++ M+ YR+LF +IK E P I G
Sbjct: 386 IKGEEILREFWQMEMAYSKWVDLAILLGMVVFYRLLFLAIIKTTETIKPIIPG 228
>gb|CV238436.1|CV238436 WS0126.B21_K06 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0126_K06 3', mRNA sequence
Length = 661
Score = 204 bits (439), Expect = 1e-051
Identities = 79/113 (69%), Positives = 93/113 (82%)
Frame = +2 / -2
Query: 554 KPFWRYPMQYISFHYWALQGQCQNDMKGLAVDNQDPDQPKIPGDFILKYIFQINVDRSKW 733
KP WRYPM YISFH+WALQGQ QND+KGL DNQ PD PKIPG++IL+ IFQI+V RSKW
Sbjct: 660 KPVWRYPMSYISFHFWALQGQYQNDLKGLLFDNQSPDLPKIPGEYILENIFQIDVHRSKW 481
Query: 734 IDLSVIFSMIFIYRILFFLMIKINEDXLPWIRGHIARKRMQKKGPTPTMGKTP 892
+DLSVIFSMI IYRI+FF+MIKI+ED PWIRG+IA++RMQ+K T P
Sbjct: 480 VDLSVIFSMIVIYRIIFFIMIKISEDITPWIRGYIAKRRMQQKNGTQNTTVAP 322
Score = 104 bits (222), Expect = 9e-022
Identities = 41/65 (63%), Positives = 46/65 (70%)
Frame = -2 / +2
Query: 747 TDRSIHLERSTLIWKMYLRMKSPGILGWSGSWLSTARPFMSFWHWPCSAQ*WKLMYCMGY 568
T RS HL+R T IW M+ M SPGILG SG WLS + PF SFW+ PC AQ WKLMY +GY
Sbjct: 467 TLRSTHLDRCTSIWNMFSSMYSPGILGRSGDWLSNSNPFKSFWYCPCRAQKWKLMYDIGY 646
Query: 567 LQKGF 553
L GF
Sbjct: 647 LHTGF 661
>gb|DT493142.1|DT493142 WS02553.C21_I10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_I10 3', mRNA sequence
Length = 787
Score = 146 bits (314), Expect(2) = 4e-046
Identities = 56/126 (44%), Positives = 82/126 (65%)
Frame = +2 / -2
Query: 296 SATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIASVIPNFLM 475
SA P+L+LI + G I Y++ H G+E +I+FVL L+A + +VESLMM +AS++PNFLM
Sbjct: 783 SAFPYLLLISVIPGAITYYLPGFHKGYEQFIYFVLVLFACMMLVESLMMTVASMVPNFLM 604
Query: 476 XXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQNDMKGLAVDNQ 655
+L G+FRLP D+P+PFW+YPM YI+FH +A QG +N+ +GL +
Sbjct: 603 GIITGAGIQAFMVLGGGFFRLPNDLPQPFWKYPMYYIAFHKYAYQGMFKNEFEGLTFPSN 424
Query: 656 DPDQPK 673
P+
Sbjct: 423 QAGGPR 406
Score = 58.8 bits (122), Expect(2) = 4e-046
Identities = 25/69 (36%), Positives = 41/69 (59%)
Frame = +2 / -2
Query: 650 NQDPDQPKIPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWIR 829
NQ IPG+ IL+ +Q+ + SKW+DL+++ M+ +YRILF ++IK E P I
Sbjct: 426 NQAGGPRTIPGEQILRDRWQVEMGVSKWVDLAILLGMVVLYRILFLVIIKTTEKIKPIIT 247
Query: 830 GHIARKRMQ 856
++ + Q
Sbjct: 246 AIVSVRPKQ 220
>gb|DT524332.1|DT524332 WS02042.C21.1_F13 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02042_F13 3', mRNA sequence
Length = 866
Score = 101 bits (215), Expect(3) = 9e-045
Identities = 36/96 (37%), Positives = 60/96 (62%)
Frame = +2 / -1
Query: 365 HPGFEHYIFFVLNLYASVTVVESLMMAIASVIPNFLMXXXXXXXXXXXFMLVSGYFRLPY 544
+ G+EH+++ +L AS+ +VES+M+A+AS++PN++M L G+F P
Sbjct: 665 YKGYEHFLYLASSLLASLLMVESMMLAVASIVPNYVMGIITGAGIQGLMALGGGFFWSPD 486
Query: 545 DIPKPFWRYPMQYISFHYWALQGQCQNDMKGLAVDN 652
D+PKPFW+YP+ Y++FH + QG + + GL N
Sbjct: 485 DLPKPFWKYPLLYVAFH*YTYQGMFKKEF*GLKFTN 378
Score = 64.8 bits (135), Expect(3) = 9e-045
Identities = 24/42 (57%), Positives = 30/42 (71%)
Frame = +2 / -3
Query: 227 KVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYF 352
+VF+RERLNGHYG +F I NT A PFL+LI + G I Y+
Sbjct: 804 QVFERERLNGHYGATSFAIGNTFYAIPFLLLISLIPGAIAYY 679
Score = 53.3 bits (110), Expect(3) = 9e-045
Identities = 21/63 (33%), Positives = 36/63 (57%)
Frame = +2 / -1
Query: 674 IPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFLMIKINEDXLPWIRGHIARKRM 853
I G+ IL+ ++Q+ + SKW+DL+++ M+ YR++F +IK E P I G +
Sbjct: 359 IKGEEILRELWQMEMAYSKWVDLAILLGMVVFYRVMFLAIIKSTEIIKPIIPGFYVVRES 180
Query: 854 QKK 862
K
Sbjct: 179 HSK 171
>gb|DN493450.1|DN493450 Y016A06.3pR Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y016A06 3', mRNA sequence
Length = 653
Score = 155 bits (333), Expect(3) = 1e-043
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = +2 / -2
Query: 611 GQCQNDMKGLAVDNQDPDQPKIPGDFILKYIFQINVDRSKWIDLSVIFSMIFIYRILFFL 790
G ND+KGL DNQ PD PKIPG++IL+YIFQI+V RSKW+DLSVIFSMI IYRI+FF
Sbjct: 598 GTIPNDLKGLLFDNQSPDLPKIPGEYILEYIFQIDVHRSKWVDLSVIFSMIVIYRIIFFF 419
Query: 791 MIKINEDXLPWIRGHIARKRMQKKGPTPTMGKTP 892
MIKI+ED PWIRG+IA++RMQ+K T P
Sbjct: 418 MIKISEDITPWIRGYIAKRRMQQKNGTQNTTVAP 317
Score = 36.3 bits (73), Expect(3) = 1e-043
Identities = 13/17 (76%), Positives = 14/17 (82%)
Frame = +2 / -3
Query: 572 PMQYISFHYWALQGQCQ 622
P YISFH+WALQGQ Q
Sbjct: 636 PNVYISFHFWALQGQYQ 586
Score = 24.0 bits (46), Expect(3) = 1e-043
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2 / -1
Query: 554 KPFWRYPM 577
KP WRYPM
Sbjct: 653 KPVWRYPM 630
>gb|CX176614.1|CX176614 C10_69-38_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 666
Score = 90.0 bits (190), Expect(4) = 6e-041
Identities = 35/42 (83%), Positives = 39/42 (92%)
Frame = +2 / +3
Query: 227 KVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYF 352
+VFQRERLNGHYGV AFVISNTISA PFLI+I F+SGT+CYF
Sbjct: 540 QVFQRERLNGHYGVVAFVISNTISAMPFLIMITFISGTVCYF 665
Score = 68.9 bits (144), Expect(4) = 5e-027
Identities = 30/41 (73%), Positives = 33/41 (80%)
Frame = -2 / -3
Query: 351 K*HMVPDKKHIRIRNGVAEMVLLMTNAATP*CPFSRSRWKT 229
K* VP+ K I IRNG+AEMVLL+TNA TP*CPFS S WKT
Sbjct: 664 K*QTVPEIKVIIIRNGIAEMVLLITNATTP*CPFSLSLWKT 542
Score = 67.0 bits (140), Expect(4) = 6e-041
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +2 / +1
Query: 143 ARAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
AR +C++FVFGFVTFMSIGGFPSFVEEMKV
Sbjct: 337 ARGSCASFVFGFVTFMSIGGFPSFVEEMKV 426
Score = 54.2 bits (112), Expect(4) = 5e-027
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -2 / -2
Query: 231 TFISSTNEGNPPMDMNVTNPKTNAEQAALA 142
TFISST EGNPP+DMNVT PKTN LA
Sbjct: 425 TFISSTKEGNPPIDMNVTKPKTNEAHDPLA 336
Score = 35.9 bits (72), Expect(4) = 6e-041
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 92 CIGTIYLDVGTKYTSIL 142
CIGTIYL+VGT Y SIL
Sbjct: 162 CIGTIYLNVGTGYNSIL 212
Score = 35.9 bits (72), Expect(4) = 6e-041
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 1 ACTLTXRSFINMSRDFG 51
A TLT RSFINMSRDFG
Sbjct: 69 AFTLTKRSFINMSRDFG 119
Score = 29.9 bits (59), Expect(4) = 5e-027
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / -3
Query: 123 VPTSR*IVPMQTVT 82
VPT R*IVPMQTVT
Sbjct: 193 VPTLR*IVPMQTVT 152
Score = 28.1 bits (55), Expect(4) = 5e-027
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -3
Query: 50 PKSRDMLMKERLVRVQ 3
PKS DMLM ER V+V+
Sbjct: 118 PKSLDMLMNERFVKVK 71
>gb|CX171013.1|CX171013 E12_69-102_10.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 668
Score = 85.8 bits (181), Expect(4) = 1e-039
Identities = 34/43 (79%), Positives = 38/43 (88%)
Frame = +2 / +3
Query: 227 KVFQRERLNGHYGVAAFVISNTISATPFLILICFLSGTICYFM 355
+VFQRERLNGHYGV AFVISNTISA PF +I F+SGT+CYFM
Sbjct: 540 QVFQRERLNGHYGVVAFVISNTISAMPFPDMITFISGTVCYFM 668
Score = 67.0 bits (140), Expect(4) = 1e-039
Identities = 26/30 (86%), Positives = 29/30 (96%)
Frame = +2 / +1
Query: 143 ARAACSAFVFGFVTFMSIGGFPSFVEEMKV 232
AR +C++FVFGFVTFMSIGGFPSFVEEMKV
Sbjct: 337 ARGSCASFVFGFVTFMSIGGFPSFVEEMKV 426
Score = 64.3 bits (134), Expect(4) = 1e-025
Identities = 29/42 (69%), Positives = 32/42 (76%)
Frame = -2 / -2
Query: 354 MK*HMVPDKKHIRIRNGVAEMVLLMTNAATP*CPFSRSRWKT 229
MK* VP+ K I NG+AEMVLL+TNA TP*CPFS S WKT
Sbjct: 667 MK*QTVPEIKVIISGNGMAEMVLLITNATTP*CPFSLSLWKT 542
Score = 54.2 bits (112), Expect(4) = 1e-025
Identities = 22/30 (73%), Positives = 23/30 (76%)
Frame = -2 / -1
Query: 231 TFISSTNEGNPPMDMNVTNPKTNAEQAALA 142
TFISST EGNPP+DMNVT PKTN LA
Sbjct: 425 TFISSTKEGNPPIDMNVTKPKTNEAHDPLA 336
Score = 35.9 bits (72), Expect(4) = 1e-039
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +2 / +3
Query: 92 CIGTIYLDVGTKYTSIL 142
CIGTIYL+VGT Y SIL
Sbjct: 162 CIGTIYLNVGTGYNSIL 212
Score = 35.9 bits (72), Expect(4) = 1e-039
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +1 / +3
Query: 1 ACTLTXRSFINMSRDFG 51
A TLT RSFINMSRDFG
Sbjct: 69 AFTLTKRSFINMSRDFG 119
Score = 29.9 bits (59), Expect(4) = 1e-025
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = -2 / -2
Query: 123 VPTSR*IVPMQTVT 82
VPT R*IVPMQTVT
Sbjct: 193 VPTLR*IVPMQTVT 152
Score = 28.1 bits (55), Expect(4) = 1e-025
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3 / -2
Query: 50 PKSRDMLMKERLVRVQ 3
PKS DMLM ER V+V+
Sbjct: 118 PKSLDMLMNERFVKVK 71
>gb|CK096273.1|CK096273 UA54DPC10.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA54DPC10 3', mRNA sequence
Length = 838
Score = 133 bits (286), Expect(2) = 1e-033
Identities = 56/174 (32%), Positives = 90/174 (51%)
Frame = +2 / -2
Query: 107 YLDVGTKYTSILARAACSAFVFGFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVAAFVIS 286
Y G L + C+ + F + +SI G P+ + E+K++ E N H G F++
Sbjct: 837 YFQAGGILCLQLWQGGCNICI*SFTSLISIAGVPALLNEIKIYACEESNRHSGALVFLLG 658
Query: 287 NTISATPFLILICFLSGTICYFMVRLHPGFEHYIFFVLNLYASVTVVESLMMAIASVIPN 466
+S+ PFL LI S + YF++ L F ++FVLN +A + V E LM+ I S+ +
Sbjct: 657 QLLSSIPFLFLISISSSLVFYFLIGLQDEFSLLMYFVLNFFACLLVNEGLMLVITSLWQH 478
Query: 467 FLMXXXXXXXXXXXFMLVSGYFRLPYDIPKPFWRYPMQYISFHYWALQGQCQND 628
ML +GYFR+ +P P W YP+ YI+FH +++QG +N+
Sbjct: 477 VFWSVSTLVSIHVVMMLSAGYFRIRSVLPGPMWTYPVSYIAFHTYSIQGLLENE 316
Score = 29.9 bits (59), Expect(2) = 1e-033
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2 / -2
Query: 725 SKWIDLSVIFSMIFIYRILFFLMI 796
SKW +L V+F M YRIL F+++
Sbjct: 222 SKWENLLVLFLMAIGYRILVFVVL 151
>gb|CK115842.1|CK115842 Y016A06 Populus infected leaf substracted cDNA library Populus
tremula cDNA clone Y016A06 5', mRNA sequence
Length = 162
Score = 115 bits (246), Expect = 4e-025
Identities = 48/52 (92%), Positives = 49/52 (94%)
Frame = +2 / +3
Query: 173 GFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVAAFVISNTISATPFLILICF 328
GFVTFMSIGGFPSFVEEMKVFQRERLNGHYGV AFVISNTISA PFLI+I F
Sbjct: 6 GFVTFMSIGGFPSFVEEMKVFQRERLNGHYGVVAFVISNTISAMPFLIMITF 161
Score = 102 bits (217), Expect = 4e-021
Identities = 42/52 (80%), Positives = 45/52 (86%)
Frame = -2 / -3
Query: 327 KHIRIRNGVAEMVLLMTNAATP*CPFSRSRWKTFISSTNEGNPPMDMNVTNP 172
K I IRNG+AEMVLL+TNA TP*CPFS S WKTFISST EGNPP+DMNVT P
Sbjct: 160 KVIIIRNGIAEMVLLITNATTP*CPFSLSLWKTFISSTKEGNPPIDMNVTKP 5
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 467,698,021
Number of Sequences: 369679
Number of extensions: 6238980
Number of successful extensions: 42037
Number of sequences better than 1.0e-020: 18
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 13932661389
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)