TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3829517.2.1
(913 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT488216.1|DT488216 WS02535.B21_N05 PT-MB-N-A-15 Populus... 232 3e-083
gb|DT502672.1|DT502672 WS0133.BR_M21 PTxD-IL-FL-A-4 Populus... 232 3e-083
gb|DT502442.1|DT502442 WS0132.BR_P21 PTxD-IL-FL-A-4 Populus... 232 3e-083
gb|CX173534.1|CX173534 E03_69-83_09.ab1 leaf inoculated wit... 232 5e-083
gb|CX168001.1|CX168001 B04_69-94_04.ab1 leaf inoculated wit... 232 2e-077
gb|BU888903.1|BU888903 P014B03 Populus petioles cDNA librar... 231 5e-072
gb|CX655604.1|CX655604 PO02037B08 Poplar SC cDNA library Po... 231 1e-070
gb|CX171051.1|CX171051 F06_69-56_12.ab1 leaf inoculated wit... 232 6e-070
gb|BU867694.1|BU867694 M103C03 Populus flower cDNA library ... 230 4e-066
gb|CA823165.1|CA823165 R21G02 two-month-old roots from clon... 232 9e-065
gb|CB239647.1|CB239647 RSH14G12 two-month-old roots from cl... 199 3e-058
gb|CX657321.1|CX657321 PO02041A02 Poplar SC cDNA library Po... 218 5e-056
gb|CV239456.1|CV239456 WS0232.B21_H19 PT-MB-A-13 Populus tr... 141 5e-056
gb|DT490502.1|DT490502 WS02545.B21_C07 PT-MB-N-A-15 Populus... 131 6e-053
gb|CX171694.1|CX171694 F10_69-92_12.ab1 leaf inoculated wit... 114 3e-052
gb|AJ780471.1|AJ780471 AJ780471 Populus euphratica leaf 3-6... 100 8e-044
gb|DT490559.1|DT490559 WS02545.B21_E19 PT-MB-N-A-15 Populus... 97 7e-039
gb|BU808748.1|BU808748 UL100TE02 Populus leaf cDNA library ... 97 2e-038
gb|BU808749.1|BU808749 UL100TE03 Populus leaf cDNA library ... 97 2e-038
gb|CX654762.1|CX654762 PO02059D02 Poplar SC cDNA library Po... 137 9e-032
gb|CX185692.1|CX185692 E07_45-102_09.ab1 leaf inoculated wi... 99 1e-024
gb|DT506436.1|DT506436 WS0189.C21_J06 PTxD-IL-N-A-9 Populus... 97 8e-022
>gb|DT488216.1|DT488216 WS02535.B21_N05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02535_N05 3', mRNA sequence
Length = 927
Score = 232 bits (501), Expect(2) = 3e-083
Identities = 93/150 (62%), Positives = 116/150 (77%)
Frame = +1 / -3
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 871 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 692
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++
Sbjct: 691 LVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKY 512
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 511 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 422
Score = 97.3 bits (206), Expect(2) = 3e-083
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1 / -3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 427 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHVAYSELPAFQNAMP 248
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 247 ENQPDASPSS 218
Score = 90.9 bits (192), Expect(3) = 3e-033
Identities = 45/76 (59%), Positives = 50/76 (65%)
Frame = -3 / +3
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 627 YFSSKYIKMAKESEITISPSTSAGTYPRGFSFKKSGLKCSPLSRLTGIYSYSSPLRLRAM 806
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 807 RTR*EQELLQ*EYSFN 854
Score = 55.1 bits (114), Expect(3) = 3e-033
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = -3 / +3
Query: 659 ASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYF 480
ASG G A NAG +Y+ +L R G MS L +A *I G+ N SA TS PVAYF
Sbjct: 231 ASG*FSGMAFWNAGSSLYATCNLDRRGN*VMSTLNLLIAP*ICGSINRSAMDTSFPVAYF 410
Query: 479 PAHPFS 462
PA FS
Sbjct: 411 PAESFS 428
Score = 34.5 bits (69), Expect(3) = 3e-033
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / +3
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T + RG + E T A * +AFF
Sbjct: 432 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAKF*RGCMLEQTTFAA**LRAFF 593
>gb|DT502672.1|DT502672 WS0133.BR_M21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0133_M21 5', mRNA sequence
Length = 767
Score = 232 bits (501), Expect(2) = 3e-083
Identities = 93/150 (62%), Positives = 116/150 (77%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 37 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 216
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++
Sbjct: 217 LVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKY 396
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 397 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 486
Score = 97.3 bits (206), Expect(2) = 3e-083
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 481 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHVAYSELPAFQNAMP 660
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 661 ENQPDASPSS 690
Score = 90.9 bits (192), Expect(3) = 3e-033
Identities = 45/76 (59%), Positives = 50/76 (65%)
Frame = -3 / -1
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 281 YFSSKYIKMAKESEITISPSTSAGTYPRGFSFKKSGLKCSPLSRLTGIYSYSSPLRLRAM 102
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 101 RTR*EQELLQ*EYSFN 54
Score = 55.1 bits (114), Expect(3) = 3e-033
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = -3 / -1
Query: 659 ASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYF 480
ASG G A NAG +Y+ +L R G MS L +A *I G+ N SA TS PVAYF
Sbjct: 677 ASG*FSGMAFWNAGSSLYATCNLDRRGN*VMSTLNLLIAP*ICGSINRSAMDTSFPVAYF 498
Query: 479 PAHPFS 462
PA FS
Sbjct: 497 PAESFS 480
Score = 34.5 bits (69), Expect(3) = 3e-033
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / -1
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T + RG + E T A * +AFF
Sbjct: 476 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAKF*RGCMLEQTTFAA**LRAFF 315
>gb|DT502442.1|DT502442 WS0132.BR_P21 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0132_P21 5', mRNA sequence
Length = 747
Score = 232 bits (501), Expect(2) = 3e-083
Identities = 93/150 (62%), Positives = 116/150 (77%)
Frame = +1 / +2
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 17 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 196
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++
Sbjct: 197 LVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKY 376
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 377 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 466
Score = 97.3 bits (206), Expect(2) = 3e-083
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 461 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHVAYSELPAFQNAMP 640
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 641 ENQPDASPSS 670
Score = 90.9 bits (192), Expect(3) = 3e-033
Identities = 45/76 (59%), Positives = 50/76 (65%)
Frame = -3 / -1
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 261 YFSSKYIKMAKESEITISPSTSAGTYPRGFSFKKSGLKCSPLSRLTGIYSYSSPLRLRAM 82
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 81 RTR*EQELLQ*EYSFN 34
Score = 55.1 bits (114), Expect(3) = 3e-033
Identities = 33/66 (50%), Positives = 38/66 (57%)
Frame = -3 / -1
Query: 659 ASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYF 480
ASG G A NAG +Y+ +L R G MS L +A *I G+ N SA TS PVAYF
Sbjct: 657 ASG*FSGMAFWNAGSSLYATCNLDRRGN*VMSTLNLLIAP*ICGSINRSAMDTSFPVAYF 478
Query: 479 PAHPFS 462
PA FS
Sbjct: 477 PAESFS 460
Score = 34.5 bits (69), Expect(3) = 3e-033
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / -1
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T + RG + E T A * +AFF
Sbjct: 456 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAKF*RGCMLEQTTFAA**LRAFF 295
>gb|CX173534.1|CX173534 E03_69-83_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 679
Score = 232 bits (502), Expect(2) = 5e-083
Identities = 94/153 (61%), Positives = 117/153 (76%)
Frame = +1 / +2
Query: 4 AEVEATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKF 183
A E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +
Sbjct: 2 ARGESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGY 181
Query: 184 VPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTV 363
VPALVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL V
Sbjct: 182 VPALVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAV 361
Query: 364 LRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
L++I +KVG E + W Q I +GF A+E L++
Sbjct: 362 LKYIKEKVGPDEVIPWVQSHINKGFAALEKLLK 460
Score = 95.9 bits (203), Expect(2) = 5e-083
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +1 / +2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ P I+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 455 LKDSAGKYATGNEVSMADLFIEPHIHGAIKRFNVDMTQFPLLSRLHEAYSELPAFQNAMP 634
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 635 ENQPDASPSS 664
Score = 90.9 bits (192), Expect(3) = 5e-033
Identities = 45/76 (59%), Positives = 50/76 (65%)
Frame = -3 / -2
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 255 YFSSKYIKMAKESEITISPSTSAGTYPRGFSFKKSGLKCSPLSRLTGIYSYSSPLRLRAM 76
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 75 RTR*EQELLQ*EYSFN 28
Score = 54.2 bits (112), Expect(3) = 5e-033
Identities = 32/66 (48%), Positives = 38/66 (57%)
Frame = -3 / -2
Query: 659 ASGCLPGSAASNAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYF 480
ASG G A NAG +Y+ +L R G MS L +A *+ G+ N SA TS PVAYF
Sbjct: 651 ASG*FSGMAFWNAGSSLYASCNLDRRGN*VMSTLNLLIAP*MCGSINRSAMDTSFPVAYF 472
Query: 479 PAHPFS 462
PA FS
Sbjct: 471 PAESFS 454
Score = 34.5 bits (69), Expect(3) = 5e-033
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / -2
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T + RG + E T A * +AFF
Sbjct: 450 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAKF*RGCMLEQTTFAA**LRAFF 289
>gb|CX168001.1|CX168001 B04_69-94_04.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 682
Score = 232 bits (501), Expect(2) = 2e-077
Identities = 93/150 (62%), Positives = 116/150 (77%)
Frame = +1 / +3
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 75 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 254
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++
Sbjct: 255 LVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKY 434
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 435 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 524
Score = 90.9 bits (192), Expect(3) = 1e-031
Identities = 45/76 (59%), Positives = 50/76 (65%)
Frame = -3 / -1
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 319 YFSSKYIKMAKESEITISPSTSAGTYPRGFSFKKSGLKCSPLSRLTGIYSYSSPLRLRAM 140
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 139 RTR*EQELLQ*EYSFN 92
Score = 77.6 bits (163), Expect(2) = 2e-077
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPA 624
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PA
Sbjct: 519 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHEAYSELPA 680
Score = 49.6 bits (102), Expect(3) = 1e-031
Identities = 28/55 (50%), Positives = 33/55 (60%)
Frame = -3 / -1
Query: 626 NAGCDMYSEWSLARVG*FDMSILVRSMAA*IWGARNTSASWTSSPVAYFPAHPFS 462
NAG +Y+ +L R G MS L +A *I G+ N SA TS PVAYFPA FS
Sbjct: 682 NAGSSLYASCNLDRRGN*VMSTLNLLIAP*ICGSINRSAMDTSFPVAYFPAESFS 518
Score = 34.5 bits (69), Expect(3) = 1e-031
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / -1
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T + RG + E T A * +AFF
Sbjct: 514 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAKF*RGCMLEQTTFAA**LRAFF 353
>gb|BU888903.1|BU888903 P014B03 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 603
Score = 231 bits (499), Expect(2) = 5e-072
Identities = 91/150 (60%), Positives = 116/150 (77%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 34 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 213
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG +I DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL N+ VL++
Sbjct: 214 LVDGEIIISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNMAVLKY 393
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 394 IKEKVGPDEVIPWVQSHINKGFAALEKLVK 483
Score = 84.9 bits (179), Expect(3) = 2e-025
Identities = 42/76 (55%), Positives = 48/76 (63%)
Frame = -3 / -2
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES I PST+AGT G S SG CSP + T +YS S+PLRLRAM
Sbjct: 278 YFSSKYIKMAKESEIIISPSTSAGTYPRGFSFKKSGLKCSPFSKLTGIYSYSSPLRLRAM 99
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 98 RTR*EQELLQ*EYSFN 51
Score = 60.6 bits (126), Expect(2) = 5e-072
Identities = 23/42 (54%), Positives = 32/42 (76%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTL 588
+K AGKYATG+EV +AD+F+ PQI AI+R +DM+ +P L
Sbjct: 478 VKDSAGKYATGNEVSMADLFIEPQILGAIKRFNVDMTQFPLL 603
Score = 35.4 bits (71), Expect(3) = 2e-025
Identities = 19/36 (52%), Positives = 22/36 (61%)
Frame = -3 / -2
Query: 569 MSILVRSMAA*IWGARNTSASWTSSPVAYFPAHPFS 462
MS L +A I G+ N SA TS PVAYFPA F+
Sbjct: 584 MSTLNLLIAPRICGSINRSAMDTSFPVAYFPAESFT 477
Score = 33.1 bits (66), Expect(3) = 2e-025
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -3 / -2
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T RG + E T A * +AFF
Sbjct: 473 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAMF*RGCMLEQTTFAA**LRAFF 312
>gb|CX655604.1|CX655604 PO02037B08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02037B08 5', mRNA sequence
Length = 621
Score = 231 bits (498), Expect(2) = 1e-070
Identities = 91/150 (60%), Positives = 116/150 (77%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 64 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 243
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG +I DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL N+ VL++
Sbjct: 244 LVDGEIIISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNMAVLKY 423
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 424 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 513
Score = 84.9 bits (179), Expect(3) = 2e-025
Identities = 42/76 (55%), Positives = 48/76 (63%)
Frame = -3 / -2
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES I PST+AGT G S SG CSP + T +YS S+PLRLRAM
Sbjct: 308 YFSSKYIKMAKESEIIISPSTSAGTYPRGFSFKKSGLKCSPFSKLTGIYSYSSPLRLRAM 129
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 128 RTR*EQELLQ*EYSFN 81
Score = 56.5 bits (117), Expect(2) = 1e-070
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMS 573
LK AGKYATG+EV +AD+F+ PQI AI+R +DM+
Sbjct: 508 LKNSAGKYATGNEVSMADLFIEPQILGAIKRFNVDMT 618
Score = 35.4 bits (71), Expect(3) = 2e-025
Identities = 20/36 (55%), Positives = 22/36 (61%)
Frame = -3 / -2
Query: 569 MSILVRSMAA*IWGARNTSASWTSSPVAYFPAHPFS 462
MS L +A I G+ N SA TS PVAYFPA FS
Sbjct: 614 MSTLNLLIAPRICGSINRSAMDTSFPVAYFPAEFFS 507
Score = 33.1 bits (66), Expect(3) = 2e-025
Identities = 21/54 (38%), Positives = 25/54 (46%)
Frame = -3 / -2
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T RG + E T A * +AFF
Sbjct: 503 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAMF*RGCMLEQTTFAA**LRAFF 342
>gb|CX171051.1|CX171051 F06_69-56_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 635
Score = 232 bits (501), Expect(2) = 6e-070
Identities = 93/150 (62%), Positives = 116/150 (77%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 82 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 261
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++
Sbjct: 262 LVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKY 441
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 442 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 531
Score = 90.9 bits (192), Expect(3) = 3e-028
Identities = 45/76 (59%), Positives = 50/76 (65%)
Frame = -3 / -1
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 326 YFSSKYIKMAKESEITISPSTSAGTYPRGFSFKKSGLKCSPLSRLTGIYSYSSPLRLRAM 147
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 146 RTR*EQELLQ*EYSFN 99
Score = 52.8 bits (109), Expect(2) = 6e-070
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDM 570
LK AG YATG+EV +AD+F+ PQI+ AI+R +DM
Sbjct: 526 LKDSAG*YATGNEVSMADLFIEPQIHGAIKRFNVDM 633
Score = 37.7 bits (76), Expect(3) = 3e-028
Identities = 20/36 (55%), Positives = 23/36 (63%)
Frame = -3 / -1
Query: 569 MSILVRSMAA*IWGARNTSASWTSSPVAYFPAHPFS 462
MS L +A *I G+ N SA TS PVAY+PA FS
Sbjct: 632 MSTLNLLIAP*ICGSINRSAMDTSFPVAYYPAESFS 525
Score = 34.5 bits (69), Expect(3) = 3e-028
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / -1
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T + RG + E T A * +AFF
Sbjct: 521 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAKF*RGCMLEQTTFAA**LRAFF 360
>gb|BU867694.1|BU867694 M103C03 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 607
Score = 230 bits (496), Expect(2) = 4e-066
Identities = 91/150 (60%), Positives = 115/150 (76%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 91 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 270
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG VI DS+A+ +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL L++
Sbjct: 271 LVDGEIVISDSFAVLMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAALKY 450
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 451 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 540
Score = 90.0 bits (190), Expect(3) = 5e-026
Identities = 45/76 (59%), Positives = 49/76 (64%)
Frame = -3 / -3
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 335 YFSSKYIKTAKESEITISPSTSAGTYPRGFSFKKSGLKCSPLSRLTGIYSYSSPLRLRAM 156
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 155 RTR*EQELLQ*EYSFN 108
Score = 42.3 bits (86), Expect(2) = 4e-066
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQ 534
LK AGKYATG+EV +AD+F+ PQ
Sbjct: 535 LKDSAGKYATGNEVSMADLFIEPQ 606
Score = 33.6 bits (67), Expect(3) = 5e-026
Identities = 15/23 (65%), Positives = 16/23 (69%)
Frame = -3 / -3
Query: 530 GARNTSASWTSSPVAYFPAHPFS 462
G+ N SA TS PVAYFPA FS
Sbjct: 602 GSINRSAMDTSFPVAYFPAESFS 534
Score = 32.2 bits (64), Expect(3) = 5e-026
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = -3 / -3
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + + + RG + E T A * +AFF
Sbjct: 530 FSSAANPLLI*L*TQGITSSGPTFSLIYFSAAKF*RGCMLEQTTFAA**LRAFF 369
>gb|CA823165.1|CA823165 R21G02 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 539
Score = 232 bits (500), Expect(2) = 9e-065
Identities = 93/150 (62%), Positives = 116/150 (77%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 31 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFGPDFLKLNPLGYVPA 210
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++
Sbjct: 211 LVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKY 390
Query: 373 IDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
I +KVG E + W Q I +GF A+E L++
Sbjct: 391 IKEKVGPDEVIPWVQSHINKGFAALEKLLK 480
Score = 91.3 bits (193), Expect(3) = 7e-026
Identities = 45/76 (59%), Positives = 50/76 (65%)
Frame = -3 / -1
Query: 257 YLSSKYSVIA*ESPITELPSTNAGTNFIGLSLTNSGSDCSPLRRFTALYS*STPLRLRAM 78
Y SSKY +A ES IT PST+AGT G S SG CSPL R T +YS S+PLRLRAM
Sbjct: 275 YFSSKYIKMAKESEITISPSTSAGTYPRGFSFKKSGPKCSPLSRLTGIYSYSSPLRLRAM 96
Query: 77 RARWEHELRQYEYSIS 30
R R E EL Q EYS +
Sbjct: 95 RTR*EQELLQ*EYSFN 48
Score = 35.9 bits (72), Expect(2) = 9e-065
Identities = 13/21 (61%), Positives = 18/21 (85%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFL 525
LK AGKYATG+EV +AD+++
Sbjct: 475 LKDSAGKYATGNEVSMADLYI 537
Score = 34.5 bits (69), Expect(3) = 7e-026
Identities = 21/54 (38%), Positives = 26/54 (48%)
Frame = -3 / -1
Query: 452 FSIAVKPLSICC*VHNTLSPAPTFWSMNLNTVRLWRG*IPEATMLAIW*FKAFF 291
FS A PL I * S PTF + +T + RG + E T A * +AFF
Sbjct: 470 FSSAANPLLI*L*TQGITSSGPTFSLIYFSTAKF*RGCMLEQTTFAA**LRAFF 309
Score = 29.5 bits (58), Expect(3) = 7e-026
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -3 / -1
Query: 515 SASWTSSPVAYFPAHPFS 462
SA TS PVAYFPA FS
Sbjct: 527 SAMDTSFPVAYFPAESFS 474
>gb|CB239647.1|CB239647 RSH14G12 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 613
Score = 199 bits (428), Expect(3) = 3e-058
Identities = 80/129 (62%), Positives = 101/129 (78%)
Frame = +1 / +1
Query: 76 RIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPALVDGSSVIGDSYAITLYLEDK 255
RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPALVDG VI DS+AI +YLE+K
Sbjct: 169 RIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPALVDGEIVISDSFAILMYLEEK 348
Query: 256 YPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERG 435
YP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++I +KVG E + W Q I +G
Sbjct: 349 YPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKYIKEKVGPDEVIPWVQSHINKG 528
Query: 436 FTAIENLIQ 462
F A+E L++
Sbjct: 529 FAALEKLLK 555
Score = 36.3 bits (73), Expect(3) = 3e-058
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1 / +3
Query: 13 EATVGRLMLYSYWRSSCSHR 72
E+ +L LYSYWRSSCS R
Sbjct: 105 ESNKNKLKLYSYWRSSCSQR 164
Score = 29.5 bits (58), Expect(3) = 3e-058
Identities = 10/15 (66%), Positives = 14/15 (93%)
Frame = +1 / +2
Query: 481 KYATGDEVQLADVFL 525
KYATG+EV +AD+F+
Sbjct: 569 KYATGNEVSMADLFI 613
>gb|CX657321.1|CX657321 PO02041A02 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02041A02 5', mRNA sequence
Length = 493
Score = 218 bits (470), Expect = 5e-056
Identities = 87/142 (61%), Positives = 109/142 (76%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 64 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 243
Query: 193 LVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRF 372
LVDG +I DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQ L N+ VL++
Sbjct: 244 LVDGEIIISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQXLQNMVVLKY 423
Query: 373 IDQKVGAGESVLWTQQQIERGF 438
I +KVG E + W Q I +GF
Sbjct: 424 IKEKVGPDEVIPWVQSPINKGF 489
>gb|CV239456.1|CV239456 WS0232.B21_H19 PT-MB-A-13 Populus trichocarpa cDNA clone WS0232_H19
3', mRNA sequence
Length = 735
Score = 141 bits (302), Expect(2) = 5e-056
Identities = 56/94 (59%), Positives = 72/94 (76%)
Frame = +1 / -3
Query: 181 FVPALVDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLT 360
+VPALVDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL
Sbjct: 733 YVPALVDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLA 554
Query: 361 VLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
VL++I +KVG E + W Q I +GF A+E L++
Sbjct: 553 VLKYIKEKVGPDEVIPWVQSHINKGFAALEKLLK 452
Score = 97.3 bits (206), Expect(2) = 5e-056
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1 / -3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 457 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHVAYSELPAFQNAMP 278
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 277 ENQPDASPSS 248
>gb|DT490502.1|DT490502 WS02545.B21_C07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02545_C07 3', mRNA sequence
Length = 739
Score = 131 bits (280), Expect(2) = 6e-053
Identities = 52/89 (58%), Positives = 67/89 (75%)
Frame = +1 / -2
Query: 196 VDGSSVIGDSYAITLYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFI 375
VDG VI DS+AI +YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++I
Sbjct: 738 VDGEIVISDSFAILMYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKYI 559
Query: 376 DQKVGAGESVLWTQQQIERGFTAIENLIQ 462
+KVG E + W Q I +GF A+E L++
Sbjct: 558 KEKVGPDEVIPWVQSHINKGFAALEKLLK 472
Score = 97.3 bits (206), Expect(2) = 6e-053
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1 / -2
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 477 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHVAYSELPAFQNAMP 298
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 297 ENQPDASPSS 268
>gb|CX171694.1|CX171694 F10_69-92_12.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 568
Score = 114 bits (243), Expect(2) = 3e-052
Identities = 45/72 (62%), Positives = 55/72 (76%)
Frame = +1 / +3
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 132 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 311
Query: 193 LVDGSSVIGDSY 228
LVDG + + Y
Sbjct: 312 LVDGEIYLEEKY 347
Score = 111 bits (238), Expect(2) = 3e-052
Identities = 43/75 (57%), Positives = 57/75 (76%)
Frame = +1 / +3
Query: 238 LYLEDKYPEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQ 417
+YLE+KYP+ PLLP DLQKKALN+Q A++V S IQPL NL VL++I +KVG E + W Q
Sbjct: 327 IYLEEKYPQHPLLPSDLQKKALNYQAANVVCSSIQPLQNLAVLKYIKEKVGPDEVIPWVQ 506
Query: 418 QQIERGFTAIENLIQ 462
I +GF A+E L++
Sbjct: 507 SHINKGFAALEKLLK 551
>gb|AJ780471.1|AJ780471 AJ780471 Populus euphratica leaf 3-6 months Populus euphratica cDNA
clone P0000900008E11F1, mRNA sequence
Length = 429
Score = 100 bits (213), Expect(2) = 8e-044
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = +1 / +3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATGDEV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 201 LKDSAGKYATGDEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHEAYSELPAFQNAMP 380
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 381 ENQPDASPSS 410
Score = 97.3 bits (206), Expect(2) = 8e-044
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = +1 / +3
Query: 259 PEPPLLPQDLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGF 438
P+ PLLP DLQKKALN+Q A++V S IQPL N+ VL++I++KVG E + W Q I +GF
Sbjct: 3 PQHPLLPSDLQKKALNYQAANVVCSSIQPLQNMAVLKYINEKVGPDEVIPWVQSHINKGF 182
Query: 439 TAIENLIQ 462
A+E L++
Sbjct: 183 AALEKLLK 206
>gb|DT490559.1|DT490559 WS02545.B21_E19 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02545_E19 3', mRNA sequence
Length = 717
Score = 97.3 bits (206), Expect(2) = 7e-039
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1 / -1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 540 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHVAYSELPAFQNAMP 361
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 360 ENQPDASPSS 331
Score = 84.0 bits (177), Expect(2) = 7e-039
Identities = 33/60 (55%), Positives = 44/60 (73%)
Frame = +1 / -1
Query: 283 DLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
DLQKKALN+Q A++V S IQPL NL VL++I +KVG E + W Q I +GF A+E L++
Sbjct: 714 DLQKKALNYQAANVVCSSIQPLQNLAVLKYIKEKVGPDEVIPWVQSHINKGFAALEKLLK 535
>gb|BU808748.1|BU808748 UL100TE02 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 627
Score = 96.8 bits (205), Expect(2) = 2e-038
Identities = 39/70 (55%), Positives = 50/70 (71%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 175 LKDSAGKYATGNEVSMADLFIEPQILGAIKRFNVDMTQFPLLSRLHEAYSELPAFQNAMP 354
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 355 ENQPDASPSS 384
Score = 83.1 bits (175), Expect(2) = 2e-038
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +1 / +1
Query: 283 DLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
DLQKKALN+Q A++V S IQPL N+ VL++I +KVG E + W Q I +GF A+E L++
Sbjct: 1 DLQKKALNYQAANVVCSSIQPLQNMAVLKYIKEKVGPDEVIPWVQSHINKGFAALEKLLK 180
>gb|BU808749.1|BU808749 UL100TE03 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 626
Score = 96.8 bits (205), Expect(2) = 2e-038
Identities = 39/70 (55%), Positives = 50/70 (71%)
Frame = +1 / +1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 175 LKDSAGKYATGNEVSMADLFIEPQILGAIKRFNVDMTQFPLLSRLHEAYSELPAFQNAMP 354
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 355 ENQPDASPSS 384
Score = 83.1 bits (175), Expect(2) = 2e-038
Identities = 32/60 (53%), Positives = 44/60 (73%)
Frame = +1 / +1
Query: 283 DLQKKALNHQIASIVASGIQPLHNLTVLRFIDQKVGAGESVLWTQQQIERGFTAIENLIQ 462
DLQKKALN+Q A++V S IQPL N+ VL++I +KVG E + W Q I +GF A+E L++
Sbjct: 1 DLQKKALNYQAANVVCSSIQPLQNMAVLKYIKEKVGPDEVIPWVQSHINKGFAALEKLLK 180
>gb|CX654762.1|CX654762 PO02059D02 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02059D02 5', mRNA sequence
Length = 313
Score = 137 bits (294), Expect = 9e-032
Identities = 54/83 (65%), Positives = 65/83 (78%)
Frame = +1 / +1
Query: 13 EATVGRLMLYSYWRSSCSHRARIALNLKGVDYEYKAVNLLKGEQSDPEFVKLNPMKFVPA 192
E+ +L LYSYWRSSCS R RIALNLKG++YEY VNLLKGE P+F+KLNP+ +VPA
Sbjct: 64 ESNKNKLKLYSYWRSSCSQRVRIALNLKGLEYEYIPVNLLKGEHFSPDFLKLNPLGYVPA 243
Query: 193 LVDGSSVIGDSYAITLYLEDKYP 261
LVDG +I DS+ I +YLE KYP
Sbjct: 244 LVDGEIIISDSFGILMYLEKKYP 312
>gb|CX185692.1|CX185692 E07_45-102_09.ab1 leaf inoculated with Marssonia pathogen of
Populus euramericana Populus x canadensis cDNA, mRNA
sequence
Length = 621
Score = 98.7 bits (209), Expect(2) = 1e-024
Identities = 40/70 (57%), Positives = 51/70 (72%)
Frame = +1 / -1
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DMS +P L+RLH Y PAF+ A+P
Sbjct: 531 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMSQFPLLSRLHVAYSELPAFQNAMP 352
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 351 ENQPDASPSS 322
Score = 35.0 bits (70), Expect(2) = 1e-024
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1 / -1
Query: 379 QKVGAGESVLWTQQQIERGFTAIENLIQ 462
+KVG E + W Q I +GF A+E L++
Sbjct: 609 EKVGPDEVIPWVQSHINKGFAALEKLLK 526
>gb|DT506436.1|DT506436 WS0189.C21_J06 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS0189_J06 3', mRNA sequence
Length = 566
Score = 97.3 bits (206), Expect(2) = 8e-022
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +1 / -3
Query: 463 LKGCAGKYATGDEVQLADVFLAPQIYAAIERTKIDMSNYPTLARLHSEYMSHPAFEAALP 642
LK AGKYATG+EV +AD+F+ PQI+ AI+R +DM+ +P L+RLH Y PAF+ A+P
Sbjct: 510 LKDSAGKYATGNEVSMADLFIEPQIHGAIKRFNVDMTQFPLLSRLHVAYSELPAFQNAMP 331
Query: 643 GKQPDAPSSS 672
QPDA SS
Sbjct: 330 ENQPDASPSS 301
Score = 26.7 bits (52), Expect(2) = 8e-022
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = +1 / -3
Query: 409 WTQQQIERGFTAIENLIQ 462
W Q I +GF A+E L++
Sbjct: 558 WVQSHINKGFAALEKLLK 505
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 440,531,005
Number of Sequences: 369679
Number of extensions: 6151639
Number of successful extensions: 44925
Number of sequences better than 1.0e-020: 27
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 12193474580
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)