TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3802297.2.1
(606 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CV273245.1|CV273245 WS01710.B21_C19 PTxD-NR-A-8 Populus ... 161 4e-039
gb|CN519704.1|CN519704 GQ0104.B3_L04 GQ010 Populus trichoca... 150 6e-036
gb|CK320792.1|CK320792 X9SP04e03 Populus stem seasonal libr... 150 6e-036
gb|CK096229.1|CK096229 UA52DPF03.3pR Populus dormant cambiu... 150 8e-036
gb|CV229766.1|CV229766 WS01914.B21_F17 PT-DX-N-A-10 Populus... 148 4e-035
gb|CV231563.1|CV231563 WS0194.B21_O16 PT-DX-N-A-10 Populus ... 148 4e-035
gb|CV252816.1|CV252816 PX0019.B21.1_B10 PT-X-FL-A-1 Populus... 148 4e-035
gb|CV252823.1|CV252823 PX0019.B21.1_B18 PT-X-FL-A-1 Populus... 148 4e-035
gb|CV252979.1|CV252979 PX0019.B21.1_L15 PT-X-FL-A-1 Populus... 148 4e-035
gb|CV257661.1|CV257661 WS0247.B21_E19 PTxD-ICC-N-A-14 Popul... 148 4e-035
gb|DT500757.1|DT500757 PX0019.BR_B10 PT-X-FL-A-1 Populus tr... 148 4e-035
gb|DT500764.1|DT500764 PX0019.BR_B18 PT-X-FL-A-1 Populus tr... 148 4e-035
gb|DT522062.1|DT522062 WS02035.B21_P06 PTxN-IB-N-A-11 Popul... 148 4e-035
gb|BU894956.1|BU894956 X017C10 Populus wood cDNA library Po... 146 1e-034
gb|CV232165.1|CV232165 WS0196.B21_M03 PT-DX-N-A-10 Populus ... 146 1e-034
gb|BU868439.1|BU868439 M115G12 Populus flower cDNA library ... 145 2e-034
gb|CK319620.1|CK319620 B9SP05f02 Populus stem seasonal libr... 145 2e-034
gb|CK090574.1|CK090574 F013P92.3pR Populus flower cDNA libr... 144 3e-034
gb|CV231440.1|CV231440 WS0194.B21_I22 PT-DX-N-A-10 Populus ... 144 3e-034
gb|CV234625.1|CV234625 WS01215.B21.1_J20 PT-GT-FL-A-3 Popul... 144 3e-034
gb|CV260077.1|CV260077 WS02013.B21_B11 PTxN-IB-N-A-11 Popul... 144 3e-034
gb|CV263308.1|CV263308 WS02020.B21_O22 PTxN-IB-N-A-11 Popul... 144 3e-034
gb|CV266280.1|CV266280 WS02029.B21_J10 PTxN-IB-N-A-11 Popul... 144 3e-034
gb|CV270405.1|CV270405 WS0151.B21_O13 PTxN-IB-A-6 Populus t... 144 3e-034
gb|DT526697.1|DT526697 WS02048.C21_L16 PTxN-IB-N-A-11 Popul... 144 3e-034
gb|DV466421.1|DV466421 MTUNUL1.P50.D09 NUL Populus fremonti... 144 3e-034
gb|DT482440.1|DT482440 WS02519.B21_N06 PT-MB-N-A-15 Populus... 144 6e-034
gb|DN493683.1|DN493683 G105P21.5pR Populus tension wood cDN... 123 9e-034
gb|CK093084.1|CK093084 G107P05.3pR Populus tension wood cDN... 143 9e-034
gb|CV254278.1|CV254278 WS0224.B21_K11 PTxD-ICC-A-12 Populus... 143 9e-034
gb|CV254756.1|CV254756 WS02411.B21_B12 PTxD-ICC-N-A-14 Popu... 143 9e-034
gb|CV254776.1|CV254776 WS02411.B21_C10 PTxD-ICC-N-A-14 Popu... 143 9e-034
gb|DN491681.1|DN491681 V013D01.3pR Populus male catkins cDN... 142 2e-033
gb|DN486788.1|DN486788 P062D05.3pR Populus petioles cDNA li... 142 2e-033
gb|CV252214.1|CV252214 WS0119.B21_O24 PT-P-FL-A-2 Populus t... 141 4e-033
gb|BU815154.1|BU815154 N037H04 Populus bark cDNA library Po... 140 8e-033
gb|BP930069.1|BP930069 BP930069 full-length enriched poplar... 138 2e-032
gb|BU867949.1|BU867949 M106C12 Populus flower cDNA library ... 138 4e-032
gb|DN485091.1|DN485091 M104G07.3pR Populus female catkins c... 137 6e-032
gb|CX174688.1|CX174688 E09_69-90_09.ab1 leaf inoculated wit... 136 1e-031
gb|CV231959.1|CV231959 WS0196.B21_B04 PT-DX-N-A-10 Populus ... 135 2e-031
gb|CV266401.1|CV266401 WS02029.B21_O18 PTxN-IB-N-A-11 Popul... 135 2e-031
gb|CV273451.1|CV273451 WS01711.B21_A16 PTxD-NR-A-8 Populus ... 86 3e-031
gb|CK100525.1|CK100525 C041P79.5pR Populus strain T89 leave... 115 9e-031
emb|AJ292975.1|PTR292975 Populus tremula x Populus tremuloi... 133 1e-030
gb|CV266372.1|CV266372 WS02029.B21_N12 PTxN-IB-N-A-11 Popul... 133 1e-030
emb|AJ292976.1|PTR292976 Populus tremula x Populus tremuloi... 133 1e-030
gb|DN487860.1|DN487860 R010A03.3pR Populus root cDNA librar... 108 1e-030
gb|DT526420.1|DT526420 WS02047.C21_P21 PTxN-IB-N-A-11 Popul... 132 2e-030
gb|CV231385.1|CV231385 WS0194.B21_G05 PT-DX-N-A-10 Populus ... 131 3e-030
gb|CV262571.1|CV262571 WS02019.B21_O21 PTxN-IB-N-A-11 Popul... 131 3e-030
gb|CV267349.1|CV267349 WS02031.B21_I05 PTxN-IB-N-A-11 Popul... 131 3e-030
gb|BU811335.1|BU811335 UL83TA06 Populus leaf cDNA library P... 131 5e-030
gb|CA927911.1|CA927911 MTU6TR.P14.D10 Aspen root cDNA Libra... 131 5e-030
gb|CA928533.1|CA928533 MTU6TR.P3.G08 Aspen root cDNA Librar... 131 5e-030
gb|BP930503.1|BP930503 BP930503 full-length enriched poplar... 131 5e-030
gb|BP933078.1|BP933078 BP933078 full-length enriched poplar... 130 6e-030
gb|CV273630.1|CV273630 WS01711.B21_K14 PTxD-NR-A-8 Populus ... 130 9e-030
gb|BP930610.1|BP930610 BP930610 full-length enriched poplar... 129 2e-029
emb|AJ277547.1|PTR277547 Populus tremula x Populus tremuloi... 128 3e-029
gb|CV131876.1|CV131876 L4P01g01 Populus stem seasonal libra... 127 4e-029
gb|CA928000.1|CA928000 MTU6TR.P15.E11 Aspen root cDNA Libra... 127 6e-029
gb|CV268088.1|CV268088 WS0204.B21_I11 PTxN-IB-N-A-11 Populu... 127 6e-029
gb|CV269917.1|CV269917 WS0209.B21_J10 PTxN-IB-N-A-11 Populu... 127 6e-029
gb|DT521175.1|DT521175 WS02033.B21_J12 PTxN-IB-N-A-11 Popul... 127 6e-029
gb|CV233766.1|CV233766 WS01212.B21_E14 PT-GT-FL-A-3 Populus... 126 2e-028
gb|CV252262.1|CV252262 PX0011.B21_B20 PT-X-FL-A-1 Populus t... 126 2e-028
gb|CV252286.1|CV252286 PX0011.B21_D02 PT-X-FL-A-1 Populus t... 126 2e-028
gb|CV230296.1|CV230296 WS01916.B21_A22 PT-DX-N-A-10 Populus... 125 2e-028
gb|BU877284.1|BU877284 V032C01 Populus flower cDNA library ... 125 3e-028
gb|CK097085.1|CK097085 UB38BPD12.3pR Populus active cambium... 125 3e-028
gb|CV255480.1|CV255480 WS02414.B21_C05 PTxD-ICC-N-A-14 Popu... 125 3e-028
gb|DT511542.1|DT511542 WS02416.B21_L24 PTxD-ICC-N-A-14 Popu... 125 3e-028
gb|DT523930.1|DT523930 WS02041.C21.1_A13 PTxN-IB-N-A-11 Pop... 125 3e-028
gb|DT526077.1|DT526077 WS02047.C21_A24 PTxN-IB-N-A-11 Popul... 125 3e-028
gb|CV131751.1|CV131751 L3P05h06 Populus stem seasonal libra... 124 6e-028
gb|CV279071.1|CV279071 WS0148.B21_E19 PTxD-IL-A-5 Populus t... 124 6e-028
gb|CV280481.1|CV280481 WS0136.B21_H05 PTxD-IL-FL-A-4 Populu... 124 6e-028
emb|AJ292974.1|PTR292974 Populus tremula x Populus tremuloi... 123 8e-028
gb|BP931431.1|BP931431 BP931431 full-length enriched poplar... 123 1e-027
gb|BI130406.1|BI130406 G105P21Y Populus cambium cDNA librar... 122 1e-027
gb|DT492957.1|DT492957 WS02552.C21_P12 PT-MB-N-A-15 Populus... 122 1e-027
gb|DT515289.1|DT515289 WS02427.B21_C16 PTxD-ICC-N-A-14 Popu... 122 3e-027
gb|CA824648.1|CA824648 R46B01 two-month-old roots from clon... 121 5e-027
gb|CK089666.1|CK089666 C025P31.3pR Populus strain T89 leave... 120 7e-027
gb|BP930403.1|BP930403 BP930403 full-length enriched poplar... 119 1e-026
gb|BP935821.1|BP935821 BP935821 full-length enriched poplar... 119 1e-026
gb|CV131711.1|CV131711 L3P04g06 Populus stem seasonal libra... 117 5e-026
gb|CX659664.1|CX659664 PO01033E02 Poplar SC cDNA library Po... 117 5e-026
gb|CN549333.1|CN549333 GQ0241.B3_K21 GQ024 Populus trichoca... 117 6e-026
gb|CV233368.1|CV233368 WS01210.B21_C22 PT-GT-FL-A-3 Populus... 117 6e-026
gb|BU877822.1|BU877822 V039F08 Populus flower cDNA library ... 116 9e-026
gb|CK096353.1|CK096353 UB11CPF02.3pR Populus active cambium... 116 1e-025
gb|DT500705.1|DT500705 PX0019.BR.1_L15 PT-X-FL-A-1 Populus ... 116 1e-025
gb|AY129243.1| Populus x canescens putative pectin methyles... 115 3e-025
gb|DT481721.1|DT481721 WS02532.BR_L15 PT-MB-N-A-15 Populus ... 114 6e-025
gb|DT487081.1|DT487081 WS02532.B21_L15 PT-MB-N-A-15 Populus... 114 6e-025
gb|BP932384.1|BP932384 BP932384 full-length enriched poplar... 113 8e-025
gb|CV131034.1|CV131034 L1P03g08 Populus stem seasonal libra... 111 3e-024
gb|CA825492.1|CA825492 R59H10 two-month-old roots from clon... 102 3e-024
gb|CV258747.1|CV258747 WS0201.B21_G12 PTxN-IB-N-A-11 Populu... 102 4e-024
gb|BI129902.1|BI129902 G097P16Y Populus cambium cDNA librar... 111 6e-024
gb|CV270349.1|CV270349 WS0151.B21_M05 PTxN-IB-A-6 Populus t... 101 8e-024
gb|CK090025.1|CK090025 C056P67.3pR Populus strain T89 leave... 100 1e-023
gb|CV267787.1|CV267787 WS02032.B21_L03 PTxN-IB-N-A-11 Popul... 100 1e-023
gb|CN519975.1|CN519975 GQ0108.B3_K09 GQ010 Populus trichoca... 109 2e-023
gb|DT513104.1|DT513104 WS02421.B21_C07 PTxD-ICC-N-A-14 Popu... 100 2e-023
gb|BP931564.1|BP931564 BP931564 full-length enriched poplar... 106 1e-022
gb|DT526236.1|DT526236 WS02047.C21_H19 PTxN-IB-N-A-11 Popul... 98 1e-022
gb|CA928772.1|CA928772 MTU6TR.P6.F05 Aspen root cDNA Librar... 106 1e-022
gb|DN497639.1|DN497639 R020H03.5pR Populus root cDNA librar... 100 2e-022
gb|CK106906.1|CK106906 UB38BPD12.5pR Populus active cambium... 102 2e-021
gb|DT526222.1|DT526222 WS02047.C21_H05 PTxN-IB-N-A-11 Popul... 67 3e-021
gb|DV466001.1|DV466001 MTUNUL1.P46.A08 NUL Populus fremonti... 62 4e-021
gb|DT470139.1|DT470139 WS01919.C21_P21 PT-DX-N-A-10 Populus... 101 4e-021
gb|BP929838.1|BP929838 BP929838 full-length enriched poplar... 62 6e-021
gb|BP933412.1|BP933412 BP933412 full-length enriched poplar... 62 6e-021
gb|CA934122.1|CA934122 MTU3TS.P3.B11 Aspen stem cDNA Librar... 100 6e-021
gb|DN487963.1|DN487963 R020H03.3pR Populus root cDNA librar... 75 1e-020
>gb|CV273245.1|CV273245 WS01710.B21_C19 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01710_C19 3', mRNA sequence
Length = 618
Score = 161 bits (346), Expect = 4e-039
Identities = 62/133 (46%), Positives = 83/133 (62%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G IHN V + + F+T+LGRPWKE+SRT+++Q+ + +DP
Sbjct: 580 AQGRTDPNQNTGISIHNSRVMASSDLRPVLSSFKTYLGRPWKEYSRTVFLQTYLDSLVDP 401
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W G+F L+T YY + N GPGA+ RVKWRG + IT ++TV +FI G+
Sbjct: 400 AGWLEWDGNFALNTLYYGEYRNSGPGASTRGRVKWRGYRVITSSTEASRFTVANFIAGRS 221
Query: 362 WLPQLGVPFIPGL 400
WLP GVPF PGL
Sbjct: 220 WLPATGVPFYPGL 182
>gb|CN519704.1|CN519704 GQ0104.B3_L04 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0104_L04 5', mRNA sequence
Length = 695
Score = 150 bits (323), Expect = 6e-036
Identities = 62/133 (46%), Positives = 77/133 (57%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 123 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 302
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + NHGPGA + +RVKW G + IT K+TV FI G
Sbjct: 303 RGWLEWDASFALDTLYYGEYMNHGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 482
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 483 WLPSTGVAFLAGL 521
>gb|CK320792.1|CK320792 X9SP04e03 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 719
Score = 150 bits (323), Expect = 6e-036
Identities = 62/133 (46%), Positives = 77/133 (57%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 90 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 269
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + NHGPGA + +RVKW G + IT K+TV FI G
Sbjct: 270 RGWLEWDASFALDTLYYGEYMNHGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 449
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 450 WLPSTGVAFLAGL 488
>gb|CK096229.1|CK096229 UA52DPF03.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA52DPF03 3', mRNA sequence
Length = 873
Score = 150 bits (322), Expect = 8e-036
Identities = 62/133 (46%), Positives = 77/133 (57%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + P+ S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 524 AQNRKDPNQNTGISIHACRILAAPDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 345
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N GPGA + +RVKW G + IT K+TV FI G
Sbjct: 344 RGWLEWDASFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTIEANKFTVAQFIYGSS 165
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 164 WLPSTGVAFLAGL 126
>gb|CV229766.1|CV229766 WS01914.B21_F17 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS01914_F17 3', mRNA sequence
Length = 668
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 535 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 356
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 355 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 176
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 175 WLPSTGVAFLAGL 137
>gb|CV231563.1|CV231563 WS0194.B21_O16 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_O16 3', mRNA sequence
Length = 859
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 568 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 389
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 388 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 209
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 208 WLPSTGVAFLAGL 170
>gb|CV252816.1|CV252816 PX0019.B21.1_B10 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_B10 3', mRNA sequence
Length = 708
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 565 AQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 386
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 385 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 206
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 205 WLPSTGVAFLAGL 167
>gb|CV252823.1|CV252823 PX0019.B21.1_B18 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_B18 3', mRNA sequence
Length = 684
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 565 AQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 386
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 385 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 206
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 205 WLPSTGVAFLAGL 167
>gb|CV252979.1|CV252979 PX0019.B21.1_L15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_L15 3', mRNA sequence
Length = 676
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 565 AQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 386
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 385 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 206
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 205 WLPSTGVAFLAGL 167
>gb|CV257661.1|CV257661 WS0247.B21_E19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0247_E19 3', mRNA sequence
Length = 785
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 580 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 401
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 400 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 221
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 220 WLPSTGVAFLAGL 182
>gb|DT500757.1|DT500757 PX0019.BR_B10 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_B10
5', mRNA sequence
Length = 642
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 216 AQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 395
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 396 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 575
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 576 WLPSTGVAFLAGL 614
>gb|DT500764.1|DT500764 PX0019.BR_B18 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_B18
5', mRNA sequence
Length = 619
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 216 AQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 395
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 396 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 575
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 576 WLPSTGVAFLAGL 614
>gb|DT522062.1|DT522062 WS02035.B21_P06 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_P06 3', mRNA sequence
Length = 835
Score = 148 bits (317), Expect = 4e-035
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 567 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 388
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 387 RGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 208
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 207 WLPSTGVAFLAGL 169
>gb|BU894956.1|BU894956 X017C10 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 632
Score = 146 bits (314), Expect = 1e-034
Identities = 61/133 (45%), Positives = 76/133 (57%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 73 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 252
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N GPGA + +RVKW G + IT K+TV FI G
Sbjct: 253 RGWLEWDASFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTIEANKFTVAQFIYGSS 432
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 433 WLPSTGVAFLAGL 471
>gb|CV232165.1|CV232165 WS0196.B21_M03 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_M03 3', mRNA sequence
Length = 705
Score = 146 bits (314), Expect = 1e-034
Identities = 61/133 (45%), Positives = 77/133 (57%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 567 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 388
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPGA + +RVKW G + IT K+TV FI G
Sbjct: 387 RGWLEWDASFALDTLYYGE*MNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSS 208
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 207 WLPSTGVAFLAGL 169
>gb|BU868439.1|BU868439 M115G12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 609
Score = 145 bits (312), Expect = 2e-034
Identities = 54/133 (40%), Positives = 80/133 (60%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G IHNC V + + +T+LGRPW+++SRT+++++++ I+
Sbjct: 175 AQGRTDPNQNTGISIHNCKVTAASDLKSVQSSVKTYLGRPWQKYSRTVFMKTDLDSLINS 354
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW+PW G+F L T YY + N GPG++ + RV W+G IT ++TV SFI G +
Sbjct: 355 AGWMPWSGNFALDTLYYGEYMNTGPGSSTANRVNWKGYHVITSASVASQFTVASFISGNN 534
Query: 362 WLPQLGVPFIPGL 400
WLP VPF GL
Sbjct: 535 WLPATNVPFTAGL 573
>gb|CK319620.1|CK319620 B9SP05f02 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 878
Score = 145 bits (311), Expect = 2e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 304 AQNRKDPNQNTGISIHACRILASSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 483
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 484 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 663
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 664 WLPSTGVSFLAGL 702
>gb|CK090574.1|CK090574 F013P92.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F013P92 3', mRNA sequence
Length = 806
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 613 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 434
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 433 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 254
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 253 WLPSTGVSFLAGL 215
>gb|CV231440.1|CV231440 WS0194.B21_I22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_I22 3', mRNA sequence
Length = 939
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 276 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 455
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 456 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 635
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 636 WLPSTGVSFLAGL 674
>gb|CV234625.1|CV234625 WS01215.B21.1_J20 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01215_J20 3', mRNA sequence
Length = 839
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 660 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 481
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 480 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 301
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 300 WLPSTGVSFLAGL 262
>gb|CV260077.1|CV260077 WS02013.B21_B11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02013_B11 3', mRNA sequence
Length = 776
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 660 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 481
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 480 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 301
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 300 WLPSTGVSFLAGL 262
>gb|CV263308.1|CV263308 WS02020.B21_O22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02020_O22 3', mRNA sequence
Length = 846
Score = 144 bits (310), Expect = 3e-034
Identities = 61/143 (42%), Positives = 80/143 (55%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G I NC + + E +F T+LGRPWKE+SRT+ +QS IGG IDP
Sbjct: 490 AQGRIDPNQNTGISIQNCDIVASSDLESEQNKFPTYLGRPWKEYSRTVVMQSNIGGHIDP 311
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W +F L+T YY + N G GA +S+RV W G IT + +++TV IQG
Sbjct: 310 TGWAEWDKEFALTTLYYGEYANRGLGAGVSKRVNWPGYHVITDPNEAKQFTVAELIQGGA 131
Query: 362 WLPQLGVPFIPGLLPQQQSGRIH 430
WL GV F GL + +H
Sbjct: 130 WLGSTGVSFTEGL*SRTSMHSLH 62
>gb|CV266280.1|CV266280 WS02029.B21_J10 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_J10 3', mRNA sequence
Length = 773
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 660 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 481
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 480 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 301
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 300 WLPSTGVSFLAGL 262
>gb|CV270405.1|CV270405 WS0151.B21_O13 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_O13 3', mRNA sequence
Length = 688
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 680 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 501
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 500 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 321
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 320 WLPSTGVSFLAGL 282
>gb|DT526697.1|DT526697 WS02048.C21_L16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02048_L16 3', mRNA sequence
Length = 887
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 520 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 341
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 340 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 161
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 160 WLPSTGVSFLAGL 122
>gb|DV466421.1|DV466421 MTUNUL1.P50.D09 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 877
Score = 144 bits (310), Expect = 3e-034
Identities = 59/133 (44%), Positives = 75/133 (56%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P
Sbjct: 680 AQNRKDPNQNTGISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHP 501
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
+GWL W F L T YY + N+GPG + +RVKW G + +T K+TV FI G
Sbjct: 500 RGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSS 321
Query: 362 WLPQLGVPFIPGL 400
WLP GV F+ GL
Sbjct: 320 WLPSTGVSFLAGL 282
>gb|DT482440.1|DT482440 WS02519.B21_N06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_N06 3', mRNA sequence
Length = 851
Score = 144 bits (308), Expect = 6e-034
Identities = 55/129 (42%), Positives = 75/129 (58%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G VI C + + + FR++LGRPWK +SRT+ +Q+EI IDP
Sbjct: 626 AQGRSDPNENTGIVIQKCRIGATQDLLAAKSSFRSYLGRPWKLYSRTIVMQTEISDIIDP 447
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W GDF L T Y + +N GPGAN + RV W+G K +T +Q + +FI+G
Sbjct: 446 AGWFEWDGDFALDTLVYREYQNTGPGANTANRVNWKGFKVVTSAIEVQPFIARNFIRGAS 267
Query: 362 WLPQLGVPF 388
WLP G P+
Sbjct: 266 WLPSTGFPY 240
>gb|DN493683.1|DN493683 G105P21.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G105P21 5', mRNA sequence
Length = 677
Score = 123 bits (263), Expect(2) = 9e-034
Identities = 49/107 (45%), Positives = 65/107 (60%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + GT IHNCT+ + S +T+LGRPWK++SRT+Y+QS + I+P
Sbjct: 181 AQGRTDPNQNTGTSIHNCTIRAADDLASSNTTVQTYLGRPWKQYSRTVYMQSFMDSLINP 360
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAM 322
GW W GDF L+T YYA+ N GPG+N + RV W G I A+
Sbjct: 361 AGWQIWSGDFALNTSYYAEYNNSGPGSNTTNRVTWPGFHVINATDAV 501
Score = 40.0 bits (81), Expect(2) = 9e-034
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2 / +1
Query: 329 YTVESFIQGQHWLPQLGVPFIPGLL 403
+TV SF+ G WLPQ VPF GL+
Sbjct: 505 FTVSSFLMGNDWLPQTAVPFSSGLI 579
>gb|CK093084.1|CK093084 G107P05.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G107P05 3', mRNA sequence
Length = 787
Score = 143 bits (307), Expect = 9e-034
Identities = 60/133 (45%), Positives = 76/133 (57%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G I NC + + E +F T+LGRPWKE+SRT+ +QS IGG IDP
Sbjct: 606 AQGRIDPNQNTGISIQNCDIVASSDLESEQNKFPTYLGRPWKEYSRTVIMQSNIGGHIDP 427
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W +F L+T YY + N G GA +S RV W G IT + +++TV IQG
Sbjct: 426 TGWAKWDKEFALTTLYYGEYANRGLGAGVSMRVNWTGYHVITDPNEAKQFTVAELIQGGA 247
Query: 362 WLPQLGVPFIPGL 400
WL GV F GL
Sbjct: 246 WLGSTGVSFTEGL 208
>gb|CV254278.1|CV254278 WS0224.B21_K11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0224_K11 3', mRNA sequence
Length = 675
Score = 143 bits (307), Expect = 9e-034
Identities = 60/133 (45%), Positives = 75/133 (56%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + GT I C + + F++FLGRPWKE+SRT+ +QS IG IDP
Sbjct: 595 AQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLGRPWKEYSRTVVMQSNIGDLIDP 416
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W G+F L T YY + N G GA S+RVKW G IT + +K+TV IQG
Sbjct: 415 AGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVKWSGYHVITSANEAKKFTVAELIQGGV 236
Query: 362 WLPQLGVPFIPGL 400
WL GV + GL
Sbjct: 235 WLKSTGVSYTEGL 197
>gb|CV254756.1|CV254756 WS02411.B21_B12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_B12 3', mRNA sequence
Length = 914
Score = 143 bits (307), Expect = 9e-034
Identities = 60/133 (45%), Positives = 75/133 (56%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + GT I C + + F++FLGRPWKE+SRT+ +QS IG IDP
Sbjct: 601 AQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLGRPWKEYSRTVVMQSNIGDLIDP 422
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W G+F L T YY + N G GA S+RVKW G IT + +K+TV IQG
Sbjct: 421 AGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVKWSGYHVITSANEAKKFTVAELIQGGV 242
Query: 362 WLPQLGVPFIPGL 400
WL GV + GL
Sbjct: 241 WLKSTGVSYTEGL 203
>gb|CV254776.1|CV254776 WS02411.B21_C10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_C10 3', mRNA sequence
Length = 871
Score = 143 bits (307), Expect = 9e-034
Identities = 60/133 (45%), Positives = 75/133 (56%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + GT I C + + F++FLGRPWKE+SRT+ +QS IG IDP
Sbjct: 595 AQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLGRPWKEYSRTVVMQSNIGDLIDP 416
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W G+F L T YY + N G GA S+RVKW G IT + +K+TV IQG
Sbjct: 415 AGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVKWSGYHVITSANEAKKFTVAELIQGGV 236
Query: 362 WLPQLGVPFIPGL 400
WL GV + GL
Sbjct: 235 WLKSTGVSYTEGL 197
>gb|DN491681.1|DN491681 V013D01.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V013D01 3', mRNA sequence
Length = 590
Score = 142 bits (305), Expect = 2e-033
Identities = 59/133 (44%), Positives = 77/133 (57%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR++ G I NC VA + F+TFLGRPWKE+SRT++++S I +DP
Sbjct: 485 AQGREDPNQNTGISILNCKVAAAADLIPVKSSFQTFLGRPWKEYSRTVFLRSYIDDLVDP 306
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GWL W F LST YY + N GPG+N S RV W G + IT ++TV +FIQG
Sbjct: 305 AGWLEWNASFALSTLYYREYMNRGPGSNTSARVTWPGYRIITNSTEASQFTVGAFIQGNT 126
Query: 362 WLPQLGVPFIPGL 400
WL +P+ L
Sbjct: 125 WLNSTDIPYFLNL 87
>gb|DN486788.1|DN486788 P062D05.3pR Populus petioles cDNA library Populus tremula cDNA
clone P062D05 3', mRNA sequence
Length = 710
Score = 142 bits (304), Expect = 2e-033
Identities = 55/129 (42%), Positives = 74/129 (57%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G VI C + + + FR++LGRPWK +SRT+ +Q+EI IDP
Sbjct: 539 AQGRNDPNENTGIVIQKCRIGATQDLLAAQSSFRSYLGRPWKLYSRTIIMQTEISDIIDP 360
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W GDF L T Y + +N GPGAN + RV W+G K +T +Q + +FI G
Sbjct: 359 VGWFEWDGDFALDTLVYREYQNTGPGANTANRVNWKGFKVVTSAIEVQPFIARNFIGGAS 180
Query: 362 WLPQLGVPF 388
WLP G P+
Sbjct: 179 WLPSTGFPY 153
>gb|CV252214.1|CV252214 WS0119.B21_O24 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS0119_O24 3', mRNA sequence
Length = 658
Score = 141 bits (302), Expect = 4e-033
Identities = 59/133 (44%), Positives = 74/133 (55%)
Frame = +2 / -3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + GT I C + + F++FLGRPWKE+SRT+ +QS IG IDP
Sbjct: 596 AQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLGRPWKEYSRTVVMQSNIGDLIDP 417
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W G+F L T YY + N G GA S+RV W G IT + +K+TV IQG
Sbjct: 416 AGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVNWAGYHVITSANEAKKFTVAELIQGGV 237
Query: 362 WLPQLGVPFIPGL 400
WL GV + GL
Sbjct: 236 WLKSTGVSYTEGL 198
>gb|BU815154.1|BU815154 N037H04 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 457
Score = 140 bits (300), Expect = 8e-033
Identities = 57/122 (46%), Positives = 71/122 (58%)
Frame = +2 / +3
Query: 35 GTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFG 214
G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P+GWL W F
Sbjct: 36 GISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHPRGWLEWDASFA 215
Query: 215 LSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIP 394
L T YY + N GPGA + +RVKW G + IT K+TV FI G WLP GV F+
Sbjct: 216 LDTLYYGEYMNSGPGAAVGQRVKWPGYRVITSTIEANKFTVAQFIYGSSWLPSTGVAFLA 395
Query: 395 GL 400
GL
Sbjct: 396 GL 401
>gb|BP930069.1|BP930069 BP930069 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-005_E09.r 3', mRNA sequence
Length = 675
Score = 138 bits (297), Expect = 2e-032
Identities = 55/122 (45%), Positives = 70/122 (57%)
Frame = +2 / -2
Query: 35 GTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFG 214
G IH C + + G F TFLGRPWK +SRT+Y+ S IG + P+GWL W F
Sbjct: 671 GISIHACRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWSTTFA 492
Query: 215 LSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIP 394
L T YY + N+GPG + +RVKW G + +T K+TV FI G WLP GV F+
Sbjct: 491 LDTLYYGEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSSWLPSTGVSFLA 312
Query: 395 GL 400
GL
Sbjct: 311 GL 306
>gb|BU867949.1|BU867949 M106C12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 576
Score = 138 bits (295), Expect = 4e-032
Identities = 49/119 (41%), Positives = 74/119 (62%)
Frame = +2 / +2
Query: 44 IHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLST 223
IHNC V + + +T+LGRPW+++SRT+++++++ I+ GW+PW G+F L T
Sbjct: 8 IHNCKVTAASDLKSVQSSVKTYLGRPWQKYSRTVFMKTDLDSLINSAGWMPWSGNFALDT 187
Query: 224 CYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
YY + N GPG++ + RV W+G IT ++TV SFI G +WLP VPF GL
Sbjct: 188 LYYGEYMNTGPGSSTANRVNWKGYHVITSASVASQFTVASFISGNNWLPATNVPFTAGL 364
>gb|DN485091.1|DN485091 M104G07.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M104G07 3', mRNA sequence
Length = 670
Score = 137 bits (294), Expect = 6e-032
Identities = 50/122 (40%), Positives = 74/122 (60%)
Frame = +2 / -3
Query: 35 GTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFG 214
G IHNC V + + +T+LGRPW+++SRT+++++++ I+ GW+PW G+F
Sbjct: 659 GISIHNCKVTAASDLKSVQSSVKTYLGRPWQKYSRTVFMKTDLDSLINSAGWMPWSGNFA 480
Query: 215 LSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIP 394
L T YY + N GPG+ + RV W+G IT ++TV SFI G +WLP VPF
Sbjct: 479 LDTLYYGEYMNTGPGSFTANRVNWKGYHVITSASVASQFTVASFISGNNWLPATNVPFTA 300
Query: 395 GL 400
GL
Sbjct: 299 GL 294
>gb|CX174688.1|CX174688 E09_69-90_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 695
Score = 136 bits (291), Expect = 1e-031
Identities = 54/128 (42%), Positives = 72/128 (56%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G VI C + + + FR++LGRPWK +SRT+ +Q+EI IDP
Sbjct: 282 AQGRNDPNENTGIVIQKCRIGATQDLLAANSSFRSYLGRPWKLYSRTIIMQTEISDIIDP 461
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W GDF L T Y + +N G GAN + RV W+G K +T +Q + +FI G
Sbjct: 462 AGWFEWDGDFALDTLVYREYQNTGLGANTANRVNWKGFKVVTSAIEVQPFIARNFIGGAS 641
Query: 362 WLPQLGVP 385
WLP G P
Sbjct: 642 WLPSTGFP 665
>gb|CV231959.1|CV231959 WS0196.B21_B04 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_B04 3', mRNA sequence
Length = 535
Score = 135 bits (290), Expect = 2e-031
Identities = 54/117 (46%), Positives = 70/117 (59%)
Frame = +2 / -3
Query: 50 NCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCY 229
NC + + E +F T+LGRPWKE+SRT+ +QS IGG IDP GW W +F L+T Y
Sbjct: 530 NCDIVASSDLESEQNKFPTYLGRPWKEYSRTVVMQSNIGGHIDPTGWAEWDKEFALTTLY 351
Query: 230 YAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
Y + N G GA +S+RV W G IT + +++TV IQG WL GV F GL
Sbjct: 350 YGEYANRGLGAGVSKRVNWPGYHVITDPNEAKQFTVAELIQGGAWLGSTGVSFTEGL 180
>gb|CV266401.1|CV266401 WS02029.B21_O18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_O18 3', mRNA sequence
Length = 528
Score = 135 bits (290), Expect = 2e-031
Identities = 54/116 (46%), Positives = 69/116 (59%)
Frame = +2 / -1
Query: 53 CTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYY 232
C + + S G F T+LGRPWK +SRT+Y+ S +G I P+GWL W F L T YY
Sbjct: 525 CRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHPRGWLEWDASFALDTLYY 346
Query: 233 AKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
+ N+GPGA + +RVKW G + IT K+TV FI G WLP GV F+ GL
Sbjct: 345 GEYMNYGPGAAVGQRVKWPGYRVITSTVEANKFTVAQFIYGSSWLPSTGVAFLAGL 178
>gb|CV273451.1|CV273451 WS01711.B21_A16 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01711_A16 3', mRNA sequence
Length = 750
Score = 85.8 bits (181), Expect(2) = 3e-031
Identities = 32/67 (47%), Positives = 42/67 (62%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G IHN + P P+ + G F T+LGRPW +SRT+ +Q+ I GFI+P
Sbjct: 483 AQGRNDPFQNTGISIHNSQILPAPDLKPVAGAFETYLGRPWMRYSRTVILQTYIDGFINP 304
Query: 182 QGWLPWL 202
GW PWL
Sbjct: 303 AGWSPWL 283
Score = 68.9 bits (144), Expect(2) = 3e-031
Identities = 27/65 (41%), Positives = 35/65 (53%)
Frame = +2 / -1
Query: 206 DFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVP 385
DF T YY + +N GPG++ RV W+G IT ++TV S I GQ WLP VP
Sbjct: 276 DFAQDTLYYGEYKNSGPGSSTRRRVAWKGFHVITSPSVASRFTVRSLIAGQSWLPATKVP 97
Query: 386 FIPGL 400
+ L
Sbjct: 96 YTSDL 82
>gb|CK100525.1|CK100525 C041P79.5pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C041P79 5', mRNA sequence
Length = 598
Score = 115 bits (245), Expect(2) = 9e-031
Identities = 47/102 (46%), Positives = 60/102 (58%)
Frame = +2 / +1
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQ RK+ G IH C + + S G F T+LGRPWK +SRT+Y+ S +G I P
Sbjct: 103 AQNRKDPNQNTGISIHACRILAASDLAPSKGTFPTYLGRPWKLYSRTVYMLSFMGDHIHP 282
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNIT 307
+GWL W F L T YY + N GPGA + +RVKW G + IT
Sbjct: 283 RGWLEWDASFALDTLYYGEYMNSGPGAAVGQRVKWPGYRVIT 408
Score = 38.2 bits (77), Expect(2) = 9e-031
Identities = 14/25 (56%), Positives = 16/25 (64%)
Frame = +2 / +2
Query: 326 KYTVESFIQGQHWLPQLGVPFIPGL 400
K+TV FI G WLP GV F+ GL
Sbjct: 428 KFTVAQFIYGSSWLPSTGVAFLAGL 502
>emb|AJ292975.1|PTR292975 Populus tremula x Populus tremuloides mRNA for putative pectin
methylesterase (PME3 gene)
Length = 2048
Score = 133 bits (285), Expect = 1e-030
Identities = 57/133 (42%), Positives = 71/133 (53%)
Frame = +2 / +3
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G VI + P+ + + F FLGRPWKE+SRT+ +QS I I P
Sbjct: 1374 AQGRSDPNQNTGIVIQKSRIGGTPDLQHARSNFSAFLGRPWKEYSRTVIMQSSISDVISP 1553
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W G F L T ++A+ EN G GA S RV W+G K IT Q +T +FI G
Sbjct: 1554 AGWREWKGRFALDTLHFAEYENSGAGAGTSGRVPWKGYKVITDATEAQAFTARNFITGSS 1733
Query: 362 WLPQLGVPFIPGL 400
WL PF GL
Sbjct: 1734 WLKSTTFPFSLGL 1772
>gb|CV266372.1|CV266372 WS02029.B21_N12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02029_N12 3', mRNA sequence
Length = 687
Score = 133 bits (284), Expect = 1e-030
Identities = 56/133 (42%), Positives = 72/133 (54%)
Frame = +2 / -2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G VI + + + F T+LGRPWKE+SRT+ +QS I I P
Sbjct: 560 AQGRTDPNQNTGIVIQKSRIGATSDLQSVKSSFPTYLGRPWKEYSRTVIMQSSITDVIQP 381
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W G F L+T YYA+ +N G GA S RV W+G + IT Q++T +FI G
Sbjct: 380 AGWFEWSGSFALNTLYYAEYQNSGAGAGTSRRVTWKGYRVITSATEAQRFTPGNFIAGSS 201
Query: 362 WLPQLGVPFIPGL 400
WL PF GL
Sbjct: 200 WLRSTTFPFALGL 162
>emb|AJ292976.1|PTR292976 Populus tremula x Populus tremuloides partial mRNA for putative
pectin methylesterase (PME4 gene)
Length = 1855
Score = 133 bits (284), Expect = 1e-030
Identities = 56/133 (42%), Positives = 72/133 (54%)
Frame = +2 / +2
Query: 2 AQGRKERRSVGGTVIHNCTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDP 181
AQGR + G VI + P+ + + F +LGRPWKE+SRT+ +QS I I P
Sbjct: 1211 AQGRSDPNQNTGIVIQKSRIGATPDLQHARSNFSVYLGRPWKEYSRTVIMQSSISDVISP 1390
Query: 182 QGWLPWLGDFGLSTCYYAKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQH 361
GW W G F L+T ++A+ EN G GA S RV W+G K IT Q +T +FI G
Sbjct: 1391 AGWREWKGRFALNTLHFAEYENSGAGAGTSGRVPWKGYKVITDATEAQAFTARNFITGSS 1570
Query: 362 WLPQLGVPFIPGL 400
WL PF GL
Sbjct: 1571 WLKSTTFPFSLGL 1609
>gb|DN487860.1|DN487860 R010A03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R010A03 3', mRNA sequence
Length = 747
Score = 108 bits (231), Expect(3) = 1e-030
Identities = 38/73 (52%), Positives = 53/73 (72%)
Frame = +2 / -1
Query: 101 RTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMSERV 280
+TFLGRPWK +S T++++S +G IDP GWLPW G+ T +Y++ EN GPGA+ RV
Sbjct: 411 KTFLGRPWKNYSTTVFMRSMMGSLIDPAGWLPWTGNTAPPTIFYSEFENFGPGASTKNRV 232
Query: 281 KWRGIKNITYQHA 319
KW+G+K IT + A
Sbjct: 231 KWKGLKTITSKQA 193
Score = 37.7 bits (76), Expect(3) = 1e-030
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2 / -1
Query: 326 KYTVESFIQGQHWLPQLGVPFIPGL 400
K+TV++FIQG+ WL G+ + PGL
Sbjct: 189 KFTVKAFIQGEGWLAGTGISYKPGL 115
Score = 24.0 bits (46), Expect(3) = 1e-030
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2 / -1
Query: 2 AQGRKERRSVGGTVIHNCTVAP 67
AQG+ + G I NCTV P
Sbjct: 498 AQGKIDPNQNTGISIQNCTVLP 433
>gb|DT526420.1|DT526420 WS02047.C21_P21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02047_P21 3', mRNA sequence
Length = 618
Score = 132 bits (283), Expect = 2e-030
Identities = 52/116 (44%), Positives = 67/116 (57%)
Frame = +2 / -1
Query: 53 CTVAPHPEFEKSVGRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYY 232
C + + G F TFLGRPWK +SRT+Y+ S IG + P+GWL W F L T YY
Sbjct: 615 CRILATSDLTPLKGSFPTFLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNTTFALDTLYY 436
Query: 233 AKVENHGPGANMSERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
+ N+GPG + +RVKW G + +T K+TV FI G WLP GV F+ GL
Sbjct: 435 GEYMNYGPGGAVGQRVKWPGYRVVTSTIEASKFTVAQFIYGSSWLPSTGVSFLAGL 268
>gb|CV231385.1|CV231385 WS0194.B21_G05 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_G05 3', mRNA sequence
Length = 436
Score = 131 bits (281), Expect = 3e-030
Identities = 51/103 (49%), Positives = 64/103 (62%)
Frame = +2 / -1
Query: 92 GRFRTFLGRPWKEHSRTLYIQSEIGGFIDPQGWLPWLGDFGLSTCYYAKVENHGPGANMS 271
G F TFLGRPWK +SRT+Y+ S IG + P+GWL W F L T YY + N+GPG +
Sbjct: 430 GSFPTFLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNTTFALDTLYYGEYMNYGPGGAVG 251
Query: 272 ERVKWRGIKNITYQHAMQKYTVESFIQGQHWLPQLGVPFIPGL 400
+RVKW G + +T K+TV FI G WLP GV F+ GL
Sbjct: 250 QRVKWPGYRVVTSTIEASKFTVAQFIYGSSWLPSTGVSFLAGL 122
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 269,561,830
Number of Sequences: 369679
Number of extensions: 3785915
Number of successful extensions: 57412
Number of sequences better than 1.0e-020: 127
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7342388850
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)