TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3748516.2.1
(1155 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT518564.1|DT518564 WS02438.B21_I18 PTxD-ICC-N-A-14 Popu... 112 2e-062
gb|DT517819.1|DT517819 WS02435.B21_G10 PTxD-ICC-N-A-14 Popu... 112 8e-060
gb|DT512363.1|DT512363 WS02419.B21_B06 PTxD-ICC-N-A-14 Popu... 112 1e-058
gb|CV260564.1|CV260564 WS02014.B21_G14 PTxN-IB-N-A-11 Popul... 112 2e-058
gb|DT507734.1|DT507734 WS02419.BR_B06 PTxD-ICC-N-A-14 Popul... 110 2e-054
gb|CV257933.1|CV257933 WS0248.B21_A20 PTxD-ICC-N-A-14 Popul... 112 4e-054
gb|CV259723.1|CV259723 WS02012.B21_B17 PTxN-IB-N-A-11 Popul... 112 3e-049
gb|CX654042.1|CX654042 PO02012B10 Poplar SC cDNA library Po... 104 5e-046
gb|CX657368.1|CX657368 PO02043E09 Poplar SC cDNA library Po... 100 1e-043
gb|CX654872.1|CX654872 PO02060H08 Poplar SC cDNA library Po... 95 3e-043
gb|CX659519.1|CX659519 PO01031F07 Poplar SC cDNA library Po... 114 3e-041
gb|CX654070.1|CX654070 PO02012F04 Poplar SC cDNA library Po... 87 7e-041
gb|CV258295.1|CV258295 WS0249.B21_B24 PTxD-ICC-N-A-14 Popul... 112 2e-039
gb|CX655588.1|CX655588 PO02036H10 Poplar SC cDNA library Po... 86 5e-033
gb|BU815039.1|BU815039 N036D09 Populus bark cDNA library Po... 104 2e-031
gb|CV270280.1|CV270280 WS0151.B21_J04 PTxN-IB-A-6 Populus t... 106 1e-026
gb|BI138921.1|BI138921 F119P23Y Populus flower cDNA library... 109 2e-024
gb|BU893439.1|BU893439 P077G06 Populus petioles cDNA librar... 85 4e-023
gb|BU895814.1|BU895814 X031D08 Populus wood cDNA library Po... 87 2e-021
>gb|DT518564.1|DT518564 WS02438.B21_I18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02438_I18 3', mRNA sequence
Length = 905
Score = 112 bits (240), Expect(5) = 2e-062
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = -3 / -1
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 587 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 408
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DG++ ++ Q+
Sbjct: 407 VEYEDGDGELKSVELKQA 354
Score = 76.7 bits (161), Expect(5) = 2e-062
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3 / -1
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 803 DGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 624
Query: 688 D 686
D
Sbjct: 623 D 621
Score = 63.4 bits (132), Expect(5) = 1e-024
Identities = 35/75 (46%), Positives = 43/75 (57%)
Frame = +3 / +1
Query: 432 CMMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFR 611
C S +SPS S S + A+ G +P T KV V PG+LHGT + PA RS S
Sbjct: 358 CFNSTDLSSPSPSSYSTTVAK**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSL 537
Query: 612 PQLAMDPNAVPLRSK 656
P +AM P AVPL+SK
Sbjct: 538 PDIAMAPKAVPLKSK 582
Score = 47.3 bits (97), Expect(5) = 2e-062
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3 / -1
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+S W PM +SWG++W++D LR P S+++T+
Sbjct: 350 DSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 249
Score = 42.3 bits (86), Expect(5) = 2e-062
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / -1
Query: 946 SLLSYSSGWLPAKATWYGAPTGAG 875
S + +S W PA ATWYG+PTGAG
Sbjct: 878 SKIQSNSDWSPAGATWYGSPTGAG 807
Score = 37.7 bits (76), Expect(5) = 1e-024
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3 / +1
Query: 687 SVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENG 827
SV+ TV PE A + L H * P P P L + S P D+ +ENG
Sbjct: 622 SVITTVTGFPEHAAFELDVHFT**QAPHPWPDLYIESPPADINEENG 762
Score = 35.9 bits (72), Expect(5) = 2e-062
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 245 ESGKTIVASGVIPAGWAPGQTYRSLVNF 162
Score = 33.1 bits (66), Expect(5) = 1e-024
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / +1
Query: 876 PAPVGAPYQVALAGSQ 923
PAPVG PYQVA AG Q
Sbjct: 808 PAPVGLPYQVAPAGDQ 855
Score = 27.2 bits (53), Expect(5) = 1e-024
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3 / +1
Query: 330 VMRMEKGPRSGRLGSILQMEPQDSCMGSQWPE 425
V +E G R+ S Q P D CMG+ E
Sbjct: 253 VSLIESGARNNEPASSFQTAPHDFCMGTHESE 348
Score = 23.5 bits (45), Expect(5) = 1e-024
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 246 WTKER*STSGM*LAGMTFLATSCLPDS 326
+T + * G AG+T LAT LPDS
Sbjct: 166 FTSDL*VCPGAHPAGITPLATMVLPDS 246
>gb|DT517819.1|DT517819 WS02435.B21_G10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_G10 3', mRNA sequence
Length = 831
Score = 112 bits (240), Expect(5) = 8e-060
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = -3 / -1
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 567 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 388
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DG++ ++ Q+
Sbjct: 387 VEYEDGDGELKSVELKQA 334
Score = 76.7 bits (161), Expect(5) = 8e-060
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3 / -1
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 783 DGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 604
Query: 688 D 686
D
Sbjct: 603 D 601
Score = 63.4 bits (132), Expect(5) = 3e-023
Identities = 35/75 (46%), Positives = 43/75 (57%)
Frame = +3 / +2
Query: 432 CMMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFR 611
C S +SPS S S + A+ G +P T KV V PG+LHGT + PA RS S
Sbjct: 338 CFNSTDLSSPSPSSYSTTVAK**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSL 517
Query: 612 PQLAMDPNAVPLRSK 656
P +AM P AVPL+SK
Sbjct: 518 PDIAMAPKAVPLKSK 562
Score = 47.3 bits (97), Expect(5) = 8e-060
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3 / -1
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+S W PM +SWG++W++D LR P S+++T+
Sbjct: 330 DSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 229
Score = 37.7 bits (76), Expect(5) = 3e-023
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3 / +2
Query: 687 SVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENG 827
SV+ TV PE A + L H * P P P L + S P D+ +ENG
Sbjct: 602 SVITTVTGFPEHAAFELDVHFT**QAPHPWPDLYIESPPADINEENG 742
Score = 35.9 bits (72), Expect(5) = 8e-060
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 225 ESGKTIVASGVIPAGWAPGQTYRSLVNF 142
Score = 33.6 bits (67), Expect(5) = 8e-060
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = -3 / -1
Query: 916 PAKATWYGAPTGAG 875
PA TWYG+PTGAG
Sbjct: 828 PAGGTWYGSPTGAG 787
Score = 28.6 bits (56), Expect(5) = 3e-023
Identities = 11/14 (78%), Positives = 11/14 (78%)
Frame = +3 / +2
Query: 876 PAPVGAPYQVALAG 917
PAPVG PYQV AG
Sbjct: 788 PAPVGLPYQVPPAG 829
Score = 27.2 bits (53), Expect(5) = 3e-023
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3 / +2
Query: 330 VMRMEKGPRSGRLGSILQMEPQDSCMGSQWPE 425
V +E G R+ S Q P D CMG+ E
Sbjct: 233 VSLIESGARNNEPASSFQTAPHDFCMGTHESE 328
Score = 23.5 bits (45), Expect(5) = 3e-023
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3 / +2
Query: 246 WTKER*STSGM*LAGMTFLATSCLPDS 326
+T + * G AG+T LAT LPDS
Sbjct: 146 FTSDL*VCPGAHPAGITPLATMVLPDS 226
>gb|DT512363.1|DT512363 WS02419.B21_B06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_B06 3', mRNA sequence
Length = 837
Score = 112 bits (240), Expect(5) = 1e-058
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = -3 / -2
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 587 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 408
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DG++ ++ Q+
Sbjct: 407 VEYEDGDGELKSVELKQA 354
Score = 76.7 bits (161), Expect(5) = 1e-058
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3 / -2
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 803 DGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 624
Query: 688 D 686
D
Sbjct: 623 D 621
Score = 63.4 bits (132), Expect(5) = 2e-022
Identities = 35/75 (46%), Positives = 43/75 (57%)
Frame = +3 / +1
Query: 432 CMMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFR 611
C S +SPS S S + A+ G +P T KV V PG+LHGT + PA RS S
Sbjct: 358 CFNSTDLSSPSPSSYSTTVAK**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSL 537
Query: 612 PQLAMDPNAVPLRSK 656
P +AM P AVPL+SK
Sbjct: 538 PDIAMAPKAVPLKSK 582
Score = 47.3 bits (97), Expect(5) = 1e-058
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3 / -2
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+S W PM +SWG++W++D LR P S+++T+
Sbjct: 350 DSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 249
Score = 37.7 bits (76), Expect(5) = 2e-022
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3 / +1
Query: 687 SVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENG 827
SV+ TV PE A + L H * P P P L + S P D+ +ENG
Sbjct: 622 SVITTVTGFPEHAAFELDVHFT**QAPHPWPDLYIESPPADINEENG 762
Score = 35.9 bits (72), Expect(5) = 1e-058
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -2
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 245 ESGKTIVASGVIPAGWAPGQTYRSLVNF 162
Score = 29.5 bits (58), Expect(5) = 1e-058
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 904 TWYGAPTGAG 875
TWYG+PTGAG
Sbjct: 836 TWYGSPTGAG 807
Score = 27.2 bits (53), Expect(5) = 2e-022
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3 / +1
Query: 330 VMRMEKGPRSGRLGSILQMEPQDSCMGSQWPE 425
V +E G R+ S Q P D CMG+ E
Sbjct: 253 VSLIESGARNNEPASSFQTAPHDFCMGTHESE 348
Score = 25.8 bits (50), Expect(5) = 2e-022
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +3 / +1
Query: 876 PAPVGAPYQV 905
PAPVG PYQV
Sbjct: 808 PAPVGLPYQV 837
Score = 23.5 bits (45), Expect(5) = 2e-022
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3 / +1
Query: 246 WTKER*STSGM*LAGMTFLATSCLPDS 326
+T + * G AG+T LAT LPDS
Sbjct: 166 FTSDL*VCPGAHPAGITPLATMVLPDS 246
>gb|CV260564.1|CV260564 WS02014.B21_G14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02014_G14 3', mRNA sequence
Length = 893
Score = 112 bits (240), Expect(5) = 2e-058
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = -3 / -3
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 639 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 460
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DG++ ++ Q+
Sbjct: 459 VEYEDGDGELKSVELKQA 406
Score = 73.9 bits (155), Expect(5) = 2e-058
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -3 / -3
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PF S S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 855 DGGACGYGNAVEQAPFFSFISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 676
Query: 688 D 686
D
Sbjct: 675 D 673
Score = 63.4 bits (132), Expect(5) = 2e-022
Identities = 35/75 (46%), Positives = 43/75 (57%)
Frame = +3 / +2
Query: 432 CMMSACTTSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFR 611
C S +SPS S S + A+ G +P T KV V PG+LHGT + PA RS S
Sbjct: 410 CFNSTDLSSPSPSSYSTTVAK**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSL 589
Query: 612 PQLAMDPNAVPLRSK 656
P +AM P AVPL+SK
Sbjct: 590 PDIAMAPKAVPLKSK 634
Score = 47.3 bits (97), Expect(5) = 2e-058
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3 / -3
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+S W PM +SWG++W++D LR P S+++T+
Sbjct: 402 DSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 301
Score = 35.9 bits (72), Expect(5) = 2e-022
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +3 / +2
Query: 687 SVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENG 827
SV+ TV PE A + L H * P P P L + S P D+ ++NG
Sbjct: 674 SVITTVTGFPEHAAFELDVHFT**QAPHPWPDLYIESPPADINEKNG 814
Score = 35.9 bits (72), Expect(5) = 2e-058
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -3
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 297 ESGKTIVASGVIPAGWAPGQTYRSLVNF 214
Score = 31.3 bits (62), Expect(5) = 2e-058
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = -3 / -3
Query: 907 ATWYGAPTGAG 875
ATWYG+PTGAG
Sbjct: 891 ATWYGSPTGAG 859
Score = 27.6 bits (54), Expect(5) = 2e-022
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +3 / +2
Query: 876 PAPVGAPYQVA 908
PAPVG PYQVA
Sbjct: 860 PAPVGLPYQVA 892
Score = 27.2 bits (53), Expect(5) = 2e-022
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = +3 / +2
Query: 330 VMRMEKGPRSGRLGSILQMEPQDSCMGSQWPE 425
V +E G R+ S Q P D CMG+ E
Sbjct: 305 VSLIESGARNNEPASSFQTAPHDFCMGTHESE 400
Score = 23.5 bits (45), Expect(5) = 2e-022
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = +3 / +2
Query: 246 WTKER*STSGM*LAGMTFLATSCLPDS 326
+T + * G AG+T LAT LPDS
Sbjct: 218 FTSDL*VCPGAHPAGITPLATMVLPDS 298
>gb|DT507734.1|DT507734 WS02419.BR_B06 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02419_B06 5', mRNA sequence
Length = 772
Score = 110 bits (235), Expect(4) = 2e-054
Identities = 40/75 (53%), Positives = 58/75 (77%)
Frame = -3 / +2
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 452 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 631
Query: 481 IEHENKDGDVVQADI 437
+E+E+ DG++ ++
Sbjct: 632 VEYEDGDGELKSVEL 676
Score = 76.7 bits (161), Expect(4) = 2e-054
Identities = 29/61 (47%), Positives = 38/61 (62%)
Frame = -3 / +2
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 236 DGGACGYGNAVEQAPFSSFISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 415
Query: 688 D 686
D
Sbjct: 416 D 418
Score = 60.2 bits (125), Expect(4) = 1e-020
Identities = 33/68 (48%), Positives = 41/68 (60%)
Frame = +3 / -2
Query: 453 TSPSLFSCSMSTARYMGLEPCWTRKVMVRPGKLHGTRLNCMSMIPACRSLSFRPQLAMDP 632
+SPS S S + A+ G +P T KV V PG+LHGT + PA RS S P +AM P
Sbjct: 660 SSPSPSSYSTTVAK**GFDPESTWKVTVLPGQLHGTL*C*ICKTPALRS*SSLPDIAMAP 481
Query: 633 NAVPLRSK 656
AVPL+SK
Sbjct: 480 KAVPLKSK 457
Score = 42.3 bits (86), Expect(4) = 2e-054
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 946 SLLSYSSGWLPAKATWYGAPTGAG 875
S + +S W PA ATWYG+PTGAG
Sbjct: 161 SKIQSNSDWSPAGATWYGSPTGAG 232
Score = 40.5 bits (82), Expect(4) = 2e-054
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3 / +1
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGP 347
+S W PM +SWG++W++D LR P
Sbjct: 688 DSDSWVPMQKSWGAVWKLDAGSLLRAP 768
Score = 37.7 bits (76), Expect(4) = 1e-020
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +3 / -2
Query: 687 SVMITV*ATPEQAGWLLFRHRIW*HEPQPLPSLKMGSLPQDVMDENG 827
SV+ TV PE A + L H * P P P L + S P D+ +ENG
Sbjct: 417 SVITTVTGFPEHAAFELDVHFT**QAPHPWPDLYIESPPADINEENG 277
Score = 33.1 bits (66), Expect(4) = 1e-020
Identities = 13/16 (81%), Positives = 13/16 (81%)
Frame = +3 / -2
Query: 876 PAPVGAPYQVALAGSQ 923
PAPVG PYQVA AG Q
Sbjct: 231 PAPVGLPYQVAPAGDQ 184
Score = 24.0 bits (46), Expect(4) = 1e-020
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +3 / -3
Query: 348 GPRSGRLGSILQMEPQDSCMGSQWPE 425
G R+ S Q P D CMG+ E
Sbjct: 767 GARNNEPASSFQTAPHDFCMGTHESE 690
>gb|CV257933.1|CV257933 WS0248.B21_A20 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0248_A20 3', mRNA sequence
Length = 808
Score = 112 bits (240), Expect(4) = 4e-054
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = -3 / -3
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 566 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 387
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DG++ ++ Q+
Sbjct: 386 VEYEDGDGELKSVELKQA 333
Score = 73.0 bits (153), Expect(4) = 4e-054
Identities = 28/61 (45%), Positives = 37/61 (60%)
Frame = -3 / -3
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q P SS S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 782 DGGACGYGNAVEQAPSSSFISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 603
Query: 688 D 686
D
Sbjct: 602 D 600
Score = 47.3 bits (97), Expect(4) = 4e-054
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3 / -3
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+S W PM +SWG++W++D LR P S+++T+
Sbjct: 329 DSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 228
Score = 35.9 bits (72), Expect(4) = 4e-054
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -3
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 224 ESGKTIVASGVIPAGWAPGQTYRSLVNF 141
>gb|CV259723.1|CV259723 WS02012.B21_B17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_B17 3', mRNA sequence
Length = 724
Score = 112 bits (240), Expect(4) = 3e-049
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = -3 / -2
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 591 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 412
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DG++ ++ Q+
Sbjct: 411 VEYEDGDGELKSVELKQA 358
Score = 56.5 bits (117), Expect(4) = 3e-049
Identities = 19/33 (57%), Positives = 26/33 (78%)
Frame = -3 / -2
Query: 784 KDGKGCGSCYQIRCLKSNHPACSGVAQTVIITD 686
K G+GCG+CYQ++C S++ ACSG TV+ITD
Sbjct: 723 KSGQGCGACYQVKCTSSSNAACSGNPVTVVITD 625
Score = 47.3 bits (97), Expect(4) = 3e-049
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3 / -2
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+S W PM +SWG++W++D LR P S+++T+
Sbjct: 354 DSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 253
Score = 35.9 bits (72), Expect(4) = 3e-049
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -2
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 249 ESGKTIVASGVIPAGWAPGQTYRSLVNF 166
>gb|CX654042.1|CX654042 PO02012B10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02012B10 5', mRNA sequence
Length = 639
Score = 104 bits (221), Expect(3) = 5e-046
Identities = 39/69 (56%), Positives = 53/69 (76%)
Frame = -3 / +2
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ ++ +RVPCN+PG +TF V GSNP Y A L
Sbjct: 431 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIEHQRVPCNWPGKKVTFHVDSGSNPYYFATL 610
Query: 481 IEHENKDGD 455
+E ++ DGD
Sbjct: 611 VE*QHGDGD 637
Score = 77.6 bits (163), Expect(3) = 5e-046
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -3 / +2
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS+ S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 215 DGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 394
Query: 688 D 686
D
Sbjct: 395 D 397
Score = 42.3 bits (86), Expect(3) = 5e-046
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 946 SLLSYSSGWLPAKATWYGAPTGAG 875
S + +S W PA ATWYG+PTGAG
Sbjct: 140 SKIQSNSDWSPAGATWYGSPTGAG 211
>gb|CX657368.1|CX657368 PO02043E09 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02043E09 5', mRNA sequence
Length = 621
Score = 100 bits (214), Expect(3) = 1e-043
Identities = 37/63 (58%), Positives = 50/63 (79%)
Frame = -3 / +2
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ ++ +RVPCN+PG T+TF V GSNP Y A L
Sbjct: 431 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIEHQRVPCNWPGKTVTFHVDSGSNPYYFATL 610
Query: 481 IEH 473
+E+
Sbjct: 611 VEY 619
Score = 72.5 bits (152), Expect(3) = 1e-043
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = -3 / +2
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS+ S G + I+K G+GCG+CYQ++C S++ A SG TV+IT
Sbjct: 215 DGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSSNAAWSGNPVTVVIT 394
Query: 688 D 686
D
Sbjct: 395 D 397
Score = 42.3 bits (86), Expect(3) = 1e-043
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 946 SLLSYSSGWLPAKATWYGAPTGAG 875
S + +S W PA ATWYG+PTGAG
Sbjct: 140 SKIQSNSDWSPAGATWYGSPTGAG 211
>gb|CX654872.1|CX654872 PO02060H08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02060H08 5', mRNA sequence
Length = 581
Score = 94.5 bits (200), Expect(3) = 3e-043
Identities = 35/58 (60%), Positives = 46/58 (79%)
Frame = -3 / +1
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLA 488
+HFDLSGTAFG+MA G D+LR+AG++ ++ +RVPCN+PG T+TF V GSNP Y A
Sbjct: 403 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIEHQRVPCNWPGKTVTFHVDSGSNPYYFA 576
Score = 77.6 bits (163), Expect(3) = 3e-043
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -3 / +1
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS+ S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 187 DGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 366
Query: 688 D 686
D
Sbjct: 367 D 369
Score = 42.3 bits (86), Expect(3) = 3e-043
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +1
Query: 946 SLLSYSSGWLPAKATWYGAPTGAG 875
S + +S W PA ATWYG+PTGAG
Sbjct: 112 SKIQSNSDWSPAGATWYGSPTGAG 183
>gb|CX659519.1|CX659519 PO01031F07 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01031F07 5', mRNA sequence
Length = 633
Score = 114 bits (244), Expect(4) = 3e-041
Identities = 42/78 (53%), Positives = 60/78 (76%)
Frame = -3 / +3
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ ++ +RVPCN+PG T+TF V GSNP Y A L
Sbjct: 87 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIEHQRVPCNWPGKTVTFHVDSGSNPYYFATL 266
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DGD+ ++ Q+
Sbjct: 267 VEYEDGDGDLKSVELKQA 320
Score = 49.6 bits (102), Expect(4) = 3e-041
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = -3 / +3
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
NS W PM +SWG++W++D LR P S+++T+
Sbjct: 324 NSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 425
Score = 35.9 bits (72), Expect(4) = 3e-041
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / +3
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 429 ESGKTIVASGVIPAGWAPGQTYRSLVNF 512
Score = 25.4 bits (49), Expect(4) = 3e-041
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3 / +3
Query: 736 SNHPACSGVAQTVIITD 686
S++ ACSG TV+ITD
Sbjct: 3 SSNAACSGNPVTVVITD 53
>gb|CX654070.1|CX654070 PO02012F04 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02012F04 5', mRNA sequence
Length = 591
Score = 86.8 bits (183), Expect(3) = 7e-041
Identities = 32/53 (60%), Positives = 43/53 (81%)
Frame = -3 / +2
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSN 503
+HFDLSGTAFG+MA G D+LR+AG++ ++ +RVPCN+PG T+TF V GSN
Sbjct: 431 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIEHQRVPCNWPGKTVTFHVDSGSN 589
Score = 77.6 bits (163), Expect(3) = 7e-041
Identities = 29/61 (47%), Positives = 39/61 (63%)
Frame = -3 / +2
Query: 868 DNGGACGFKGTNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIIT 689
D G Q PFSS+ S G + I+K G+GCG+CYQ++C S++ ACSG TV+IT
Sbjct: 215 DGGACGYGNAVEQAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVIT 394
Query: 688 D 686
D
Sbjct: 395 D 397
Score = 42.3 bits (86), Expect(3) = 7e-041
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = -3 / +2
Query: 946 SLLSYSSGWLPAKATWYGAPTGAG 875
S + +S W PA ATWYG+PTGAG
Sbjct: 140 SKIQSNSDWSPAGATWYGSPTGAG 211
>gb|CV258295.1|CV258295 WS0249.B21_B24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0249_B24 3', mRNA sequence
Length = 741
Score = 112 bits (240), Expect(4) = 2e-039
Identities = 41/78 (52%), Positives = 60/78 (76%)
Frame = -3 / -1
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVL 482
+HFDLSGTAFG+MA G D+LR+AG++ +Q +RVPCN+PG T+TF V GSNP Y A +
Sbjct: 663 FHFDLSGTAFGAMAISGKEDQLRNAGVLQIQHQRVPCNWPGKTVTFHVDSGSNPYYFATV 484
Query: 481 IEHENKDGDVVQADIMQS 428
+E+E+ DG++ ++ Q+
Sbjct: 483 VEYEDGDGELKSVELKQA 430
Score = 47.3 bits (97), Expect(4) = 2e-039
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = -3 / -1
Query: 427 NSGHWEPMHESWGSIWRIDPNRPLRGPFSMRITN 326
+S W PM +SWG++W++D LR P S+++T+
Sbjct: 426 DSDSWVPMQKSWGAVWKLDAGSLLRAPLSIKLTS 325
Score = 35.9 bits (72), Expect(4) = 2e-039
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3 / -1
Query: 325 ESGRQLVAKNVIPANYIPDVDYRSFVQY 242
ESG+ +VA VIPA + P YRS V +
Sbjct: 321 ESGKTIVASGVIPAGWAPGQTYRSLVNF 238
Score = 23.1 bits (44), Expect(4) = 2e-039
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -3 / -1
Query: 724 ACSGVAQTVIITD 686
ACSG TV+ITD
Sbjct: 735 ACSGNPVTVVITD 697
>gb|CX655588.1|CX655588 PO02036H10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02036H10 5', mRNA sequence
Length = 362
Score = 85.8 bits (181), Expect(2) = 5e-033
Identities = 32/58 (55%), Positives = 44/58 (75%)
Frame = -3 / +3
Query: 661 YHFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLA 488
+H DLSGTAFG+MA G D+LR+A ++ ++ +RVPCN+PG T+TF V GS+P Y A
Sbjct: 186 FHLDLSGTAFGAMAISGKEDQLRNAAVLQIEHQRVPCNWPGKTVTFHVDSGSHPYYSA 359
Score = 76.2 bits (160), Expect(2) = 5e-033
Identities = 27/49 (55%), Positives = 37/49 (75%)
Frame = -3 / +3
Query: 832 QYPFSSMTSCGNEPIFKDGKGCGSCYQIRCLKSNHPACSGVAQTVIITD 686
Q PFSS+ S G + I+K G+GCG+CYQ++C S++ ACSG TV+ITD
Sbjct: 6 QAPFSSLISAGGDSIYKSGQGCGACYQVKCTSSSNAACSGNPVTVVITD 152
>gb|BU815039.1|BU815039 N036D09 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 767
Score = 104 bits (222), Expect(3) = 2e-031
Identities = 42/95 (44%), Positives = 57/95 (60%)
Frame = -3 / +1
Query: 658 HFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLI 479
HFDLSG AFG MA G N +LR+ G + + +RR PC +PG I F V GS +L++L+
Sbjct: 220 HFDLSGAAFGRMAISGENGQLRNRGELPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLV 399
Query: 478 EHENKDGDVVQADIMQSNSGHWEPMHESWGSIWRI 374
E E+ DGDV I ++ W M+ WG+ W I
Sbjct: 400 EFEDGDGDVGSMHIREAGGTEWLEMNHVWGATWCI 504
Score = 43.2 bits (88), Expect(3) = 2e-031
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -3 / +1
Query: 826 PFSSMTSCGNEPIFKDGKGCGSCYQIRCL 740
PF + + +FK+G+GCG+CY++RCL
Sbjct: 49 PFRARVGAVSPVLFKNGEGCGACYKVRCL 135
Score = 26.7 bits (52), Expect(3) = 2e-031
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = -3 / +1
Query: 361 PLRGPFSMRITNESGRQLVA 302
PL+GPFS+++T S R+ ++
Sbjct: 514 PLKGPFSVKLTTLSTRRTLS 573
>gb|CV270280.1|CV270280 WS0151.B21_J04 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0151_J04 3', mRNA sequence
Length = 913
Score = 106 bits (226), Expect(3) = 1e-026
Identities = 43/95 (45%), Positives = 57/95 (60%)
Frame = -3 / -2
Query: 658 HFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLI 479
HFDLSG AFG MA G N +LR+ G I + +RR PC +PG I F V GS +L++L+
Sbjct: 798 HFDLSGAAFGRMAISGENGQLRNRGEIPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSILV 619
Query: 478 EHENKDGDVVQADIMQSNSGHWEPMHESWGSIWRI 374
E E+ DGDV I ++ W M+ WG+ W I
Sbjct: 618 EFEDGDGDVGSMHIREAGGTEWLEMNHVWGATWCI 514
Score = 27.6 bits (54), Expect(3) = 1e-026
Identities = 7/10 (70%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 769 CGSCYQIRCL 740
CG+CY++RCL
Sbjct: 912 CGACYKVRCL 883
Score = 24.0 bits (46), Expect(3) = 1e-026
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = -3 / -2
Query: 361 PLRGPFSMRIT 329
PL+GPFS+++T
Sbjct: 504 PLKGPFSVKLT 472
>gb|BI138921.1|BI138921 F119P23Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 493
Score = 109 bits (232), Expect(2) = 2e-024
Identities = 44/95 (46%), Positives = 58/95 (61%)
Frame = -3 / +1
Query: 658 HFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLI 479
HFDLSG AFG MA G N +LR+ G I + +RR PCN+PG I F V GS +L++L+
Sbjct: 67 HFDLSGAAFGRMAISGENGQLRNRGEIPVIYRRTPCNYPGKNIAFHVNEGSTDYWLSILV 246
Query: 478 EHENKDGDVVQADIMQSNSGHWEPMHESWGSIWRI 374
E E+ DGDV I ++ W M+ WG+ W I
Sbjct: 247 EFEDGDGDVGSMHIREAGGTEWLEMNHVWGATWCI 351
Score = 24.0 bits (46), Expect(2) = 2e-024
Identities = 7/11 (63%), Positives = 11/11 (100%)
Frame = -3 / +1
Query: 361 PLRGPFSMRIT 329
PL+GPFS+++T
Sbjct: 361 PLKGPFSVKLT 393
>gb|BU893439.1|BU893439 P077G06 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 463
Score = 85.4 bits (180), Expect(2) = 4e-023
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = -3 / +3
Query: 658 HFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLI 479
HFDLSG A G MA G N +LR+ G + + +RR PC +PG I F V GS +L++L+
Sbjct: 246 HFDLSGAAIGRMAISGENGQLRNRGELPVSYRRTPCKYPGKNIAFHVNEGSTDYWLSLLV 425
Query: 478 EHENKDGDV 452
E E+ DGDV
Sbjct: 426 EFEDGDGDV 452
Score = 43.2 bits (88), Expect(2) = 4e-023
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = -3 / +3
Query: 826 PFSSMTSCGNEPIFKDGKGCGSCYQIRCL 740
PF + + +FK+G+GCG+CY++RCL
Sbjct: 75 PFRARVGAVSPVLFKNGEGCGACYKVRCL 161
>gb|BU895814.1|BU895814 X031D08 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 624
Score = 86.8 bits (183), Expect(2) = 2e-021
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = -3 / +1
Query: 658 HFDLSGTAFGSMASWGLNDKLRHAGIIDMQFRRVPCNFPGLTITFRVQHGSNPMYLAVLI 479
HFDLSG AFG MA G N +LR+ G + + +RR PC +PG I F V GS +L++L+
Sbjct: 169 HFDLSGAAFGRMAISGENGQLRNRGELPVIYRRTPCKYPGKNIAFHVNEGSTDYWLSLLV 348
Query: 478 EHENKDGDV 452
E E+ DGDV
Sbjct: 349 EFEDGDGDV 375
Score = 36.3 bits (73), Expect(2) = 2e-021
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = -3 / +1
Query: 808 SCGNEPIFKDGKGCGSCYQIRCL 740
+ G +FK+G+G G+CY++RCL
Sbjct: 16 TAGEPVLFKNGEGRGACYKVRCL 84
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 445,848,212
Number of Sequences: 369679
Number of extensions: 6346308
Number of successful extensions: 94684
Number of sequences better than 1.0e-020: 20
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 15957477231
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)