TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3390529.2.1
(407 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU825401.1|BU825401 UK108TC08 Populus apical shoot cDNA ... 167 2e-041
gb|BU827221.1|BU827221 UK129TH06 Populus apical shoot cDNA ... 167 2e-041
gb|BU832675.1|BU832675 T037A02 Populus apical shoot cDNA li... 167 2e-041
gb|BU809631.1|BU809631 UL60PB03 Populus leaf cDNA library P... 167 3e-041
gb|BU868620.1|BU868620 M118B08 Populus flower cDNA library ... 166 6e-041
gb|CN524077.1|CN524077 GQ015M04.T3_E05 GQ015 Populus tricho... 166 6e-041
gb|CV237173.1|CV237173 WS01226.B21_I14 PT-GT-FL-A-3 Populus... 166 6e-041
gb|CV242513.1|CV242513 WS02515.B21_E08 PT-MB-N-A-15 Populus... 166 6e-041
gb|CV242526.1|CV242526 WS02515.B21_E22 PT-MB-N-A-15 Populus... 166 6e-041
gb|CV243712.1|CV243712 WS0252.B21_K08 PT-MB-N-A-15 Populus ... 166 6e-041
gb|CV254935.1|CV254935 WS02411.B21_J19 PTxD-ICC-N-A-14 Popu... 166 6e-041
gb|DN492237.1|DN492237 V057F01.3pR Populus male catkins cDN... 166 6e-041
gb|DT470758.1|DT470758 WS01210.BR_M01 PT-GT-FL-A-3 Populus ... 166 6e-041
gb|DT471394.1|DT471394 WS01213.BR_K18 PT-GT-FL-A-3 Populus ... 166 6e-041
gb|DT472419.1|DT472419 WS01226.BR.1_I14 PT-GT-FL-A-3 Populu... 166 6e-041
gb|DT473912.1|DT473912 WS01230.BR_C05 PT-GT-FL-A-3 Populus ... 166 6e-041
gb|DT476592.1|DT476592 WS01230.B21_C05 PT-GT-FL-A-3 Populus... 166 6e-041
gb|DT508470.1|DT508470 WS02421.BR_B02 PTxD-ICC-N-A-14 Popul... 166 6e-041
gb|DT510453.1|DT510453 WS02426.BR_J13 PTxD-ICC-N-A-14 Popul... 166 6e-041
gb|DT513079.1|DT513079 WS02421.B21_B02 PTxD-ICC-N-A-14 Popu... 166 6e-041
gb|DT515080.1|DT515080 WS02426.B21_J13 PTxD-ICC-N-A-14 Popu... 166 6e-041
gb|DT517112.1|DT517112 WS02433.B21_F12 PTxD-ICC-N-A-14 Popu... 166 6e-041
gb|AJ768524.1|AJ768524 AJ768524 Populus euphratica leaf adu... 166 6e-041
gb|CK318026.1|CK318026 B9P04f03 Populus stem seasonal libra... 166 9e-041
gb|CV274419.1|CV274419 WS0173.B21_D15 PTxD-NR-A-8 Populus t... 166 9e-041
gb|CX170168.1|CX170168 C06_69-47_06.ab1 leaf inoculated wit... 166 9e-041
gb|CV267241.1|CV267241 WS02031.B21_D11 PTxN-IB-N-A-11 Popul... 165 1e-040
gb|AJ776930.1|AJ776930 AJ776930 Populus euphratica root 3-6... 165 2e-040
gb|CA823405.1|CA823405 R25F12 two-month-old roots from clon... 163 6e-040
gb|CA825790.1|CA825790 R67E10 two-month-old roots from clon... 163 6e-040
gb|CV227500.1|CV227500 WS0167.B21_F19 PT-DX-A-7 Populus tri... 163 6e-040
gb|CV242511.1|CV242511 WS02515.B21_E05 PT-MB-N-A-15 Populus... 163 6e-040
gb|DT477112.1|DT477112 WS02519.BR_A01 PT-MB-N-A-15 Populus ... 163 6e-040
gb|DT482137.1|DT482137 WS02519.B21_A01 PT-MB-N-A-15 Populus... 163 6e-040
gb|CK318306.1|CK318306 B9P07g09 Populus stem seasonal libra... 161 2e-039
gb|CK319662.1|CK319662 B9SP07f06 Populus stem seasonal libr... 160 3e-039
gb|BU827970.1|BU827970 K013P59P Populus apical shoot cDNA l... 160 4e-039
gb|CX169758.1|CX169758 D07_69-49_07.ab1 leaf inoculated wit... 158 1e-038
gb|CX174673.1|CX174673 G10_69-32_14.ab1 leaf inoculated wit... 158 1e-038
gb|CK097265.1|CK097265 UB45DPE08.3pR Populus active cambium... 155 1e-037
gb|CK107070.1|CK107070 UB45DPE08.5pR Populus active cambium... 121 3e-034
gb|CX169473.1|CX169473 B03_69-13_03.ab1 leaf inoculated wit... 143 5e-034
gb|DT471446.1|DT471446 WS01213.BR_N24 PT-GT-FL-A-3 Populus ... 138 2e-032
gb|CV245654.1|CV245654 WS0259.B21_A10 PT-MB-N-A-15 Populus ... 137 4e-032
gb|CV256396.1|CV256396 WS0243.B21_L18 PTxD-ICC-N-A-14 Popul... 133 8e-031
gb|DN502181.1|DN502181 V057F01.5pR Populus male catkins cDN... 79 2e-023
gb|DT525812.1|DT525812 WS02046.C21_F18 PTxN-IB-N-A-11 Popul... 107 4e-023
gb|BU891967.1|BU891967 P057F08 Populus petioles cDNA librar... 104 4e-022
gb|CV235377.1|CV235377 WS01218.B21_O09 PT-GT-FL-A-3 Populus... 101 2e-021
>gb|BU825401.1|BU825401 UK108TC08 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 564
Score = 167 bits (360), Expect = 2e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAG RGLEI G FIKFTAIGVYLED ++ +L+ KW GKTA EL
Sbjct: 89 KPPASNNTLFLGGAGARGLEIEGKFIKFTAIGVYLEDNSLQSLSAKWKGKTAKELTDSVE 268
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+VTG FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 269 FFRDIVTGPFEKFMRVTMILPLTGLQYSEKVAENCVRIWK 388
>gb|BU827221.1|BU827221 UK129TH06 Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 609
Score = 167 bits (360), Expect = 2e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAG RGLEI G FIKFTAIGVYLED ++ +L+ KW GKTA EL
Sbjct: 85 KPPASNNTLFLGGAGARGLEIEGKFIKFTAIGVYLEDNSLQSLSAKWKGKTAKELTDSVE 264
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+VTG FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 265 FFRDIVTGPFEKFMRVTMILPLTGLQYSEKVAENCVRIWK 384
>gb|BU832675.1|BU832675 T037A02 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 704
Score = 167 bits (360), Expect = 2e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAG RGLEI G FIKFTAIGVYLED ++ +L+ KW GKTA EL
Sbjct: 91 KPPASNNTLFLGGAGARGLEIEGKFIKFTAIGVYLEDNSLQSLSAKWKGKTAKELTDSVE 270
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+VTG FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 271 FFRDIVTGPFEKFMRVTMILPLTGLQYSEKVAENCVRIWK 390
>gb|BU809631.1|BU809631 UL60PB03 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 437
Score = 167 bits (359), Expect = 3e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAG RGLEI G FIKFTAIGVYLED ++ +L+ KW GKTA EL
Sbjct: 97 KPPASNNTLFLGGAGARGLEIEGKFIKFTAIGVYLEDNSLQSLSAKWKGKTAKELTDSVE 276
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+VTG FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 277 FFRDIVTGPFEKFMRVTMILPLTGLQYSEKVAENCVRXWK 396
>gb|BU868620.1|BU868620 M118B08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 776
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 82 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 261
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 262 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 381
>gb|CN524077.1|CN524077 GQ015M04.T3_E05 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M04_E05 5', mRNA sequence
Length = 776
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 69 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 248
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 249 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 368
>gb|CV237173.1|CV237173 WS01226.B21_I14 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_I14 3', mRNA sequence
Length = 842
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 809 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 630
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 629 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 510
>gb|CV242513.1|CV242513 WS02515.B21_E08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_E08 3', mRNA sequence
Length = 845
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 810 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 631
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 630 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 511
>gb|CV242526.1|CV242526 WS02515.B21_E22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_E22 3', mRNA sequence
Length = 865
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 810 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 631
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 630 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 511
>gb|CV243712.1|CV243712 WS0252.B21_K08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0252_K08 3', mRNA sequence
Length = 892
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 811 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 632
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 631 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 512
>gb|CV254935.1|CV254935 WS02411.B21_J19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_J19 3', mRNA sequence
Length = 881
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 812 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 633
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 632 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 513
>gb|DN492237.1|DN492237 V057F01.3pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V057F01 3', mRNA sequence
Length = 812
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 693 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 514
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 513 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 394
>gb|DT470758.1|DT470758 WS01210.BR_M01 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01210_M01 5', mRNA sequence
Length = 695
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 88 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 267
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 268 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 387
>gb|DT471394.1|DT471394 WS01213.BR_K18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01213_K18 5', mRNA sequence
Length = 666
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 88 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 267
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 268 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 387
>gb|DT472419.1|DT472419 WS01226.BR.1_I14 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_I14 5', mRNA sequence
Length = 896
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 89 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 268
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 269 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 388
>gb|DT473912.1|DT473912 WS01230.BR_C05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01230_C05 5', mRNA sequence
Length = 871
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 82 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 261
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 262 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 381
>gb|DT476592.1|DT476592 WS01230.B21_C05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01230_C05 3', mRNA sequence
Length = 900
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 832 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 653
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 652 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 533
>gb|DT508470.1|DT508470 WS02421.BR_B02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_B02 5', mRNA sequence
Length = 867
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 70 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 249
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 250 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 369
>gb|DT510453.1|DT510453 WS02426.BR_J13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_J13 5', mRNA sequence
Length = 731
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 79 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 258
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 259 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 378
>gb|DT513079.1|DT513079 WS02421.B21_B02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02421_B02 3', mRNA sequence
Length = 850
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 811 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 632
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 631 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 512
>gb|DT515080.1|DT515080 WS02426.B21_J13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02426_J13 3', mRNA sequence
Length = 866
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 810 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 631
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 630 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 511
>gb|DT517112.1|DT517112 WS02433.B21_F12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_F12 3', mRNA sequence
Length = 844
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / -2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 810 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 631
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV+ WK
Sbjct: 630 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVSIWK 511
>gb|AJ768524.1|AJ768524 AJ768524 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100018H01F1, mRNA sequence
Length = 533
Score = 166 bits (357), Expect = 6e-041
Identities = 69/100 (69%), Positives = 77/100 (77%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK+A EL
Sbjct: 77 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKSAQELTDSVE 256
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 257 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVNIWK 376
>gb|CK318026.1|CK318026 B9P04f03 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 729
Score = 166 bits (356), Expect = 9e-041
Identities = 69/100 (69%), Positives = 76/100 (76%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 85 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 264
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 265 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVTIWK 384
>gb|CV274419.1|CV274419 WS0173.B21_D15 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0173_D15 3', mRNA sequence
Length = 796
Score = 166 bits (356), Expect = 9e-041
Identities = 69/100 (69%), Positives = 76/100 (76%)
Frame = +1 / -1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 727 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 548
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 547 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVTIWK 428
>gb|CX170168.1|CX170168 C06_69-47_06.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 656
Score = 166 bits (356), Expect = 9e-041
Identities = 69/100 (69%), Positives = 76/100 (76%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 85 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 264
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 265 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVTIWK 384
>gb|CV267241.1|CV267241 WS02031.B21_D11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_D11 3', mRNA sequence
Length = 881
Score = 165 bits (355), Expect = 1e-040
Identities = 69/100 (69%), Positives = 76/100 (76%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A ELA
Sbjct: 810 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDKSLESLAAKWKGKIAKELADSVE 631
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENC WK
Sbjct: 630 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCANIWK 511
>gb|AJ776930.1|AJ776930 AJ776930 Populus euphratica root 3-6 months Populus euphratica cDNA
clone P0000400020E02F1, mRNA sequence
Length = 512
Score = 165 bits (354), Expect = 2e-040
Identities = 68/100 (68%), Positives = 77/100 (77%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK+A EL
Sbjct: 71 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDKSLQSLAAKWKGKSAQELTDSVE 250
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG Q++EKV ENCV WK
Sbjct: 251 FFRDIVRGPFEKFMRVTMILPLTGLQFSEKVAENCVNIWK 370
>gb|CA823405.1|CA823405 R25F12 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 635
Score = 163 bits (350), Expect = 6e-040
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 77 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 256
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENC WK
Sbjct: 257 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCANIWK 376
>gb|CA825790.1|CA825790 R67E10 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 618
Score = 163 bits (350), Expect = 6e-040
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +1 / +3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 93 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 272
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENC WK
Sbjct: 273 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCANIWK 392
>gb|CV227500.1|CV227500 WS0167.B21_F19 PT-DX-A-7 Populus trichocarpa cDNA clone WS0167_F19
3', mRNA sequence
Length = 864
Score = 163 bits (350), Expect = 6e-040
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 811 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 632
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENC WK
Sbjct: 631 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCANIWK 512
>gb|CV242511.1|CV242511 WS02515.B21_E05 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02515_E05 3', mRNA sequence
Length = 847
Score = 163 bits (350), Expect = 6e-040
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 791 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 612
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENC WK
Sbjct: 611 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCANIWK 492
>gb|DT477112.1|DT477112 WS02519.BR_A01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_A01 5', mRNA sequence
Length = 829
Score = 163 bits (350), Expect = 6e-040
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +1 / +3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 57 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 236
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENC WK
Sbjct: 237 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCANIWK 356
>gb|DT482137.1|DT482137 WS02519.B21_A01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_A01 3', mRNA sequence
Length = 847
Score = 163 bits (350), Expect = 6e-040
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +1 / -3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 791 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 612
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENC WK
Sbjct: 611 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCANIWK 492
>gb|CK318306.1|CK318306 B9P07g09 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 771
Score = 161 bits (347), Expect = 2e-039
Identities = 68/100 (68%), Positives = 75/100 (75%)
Frame = +1 / +3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGV LED ++ +LA KW GK A EL
Sbjct: 84 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVSLEDNSLQSLAAKWKGKIAKELTDSVE 263
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FFRD+V G FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 264 FFRDIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVTIWK 383
>gb|CK319662.1|CK319662 B9SP07f06 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 912
Score = 160 bits (345), Expect = 3e-039
Identities = 67/100 (67%), Positives = 75/100 (75%)
Frame = +1 / +3
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 126 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 305
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
F R++V G FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 306 FLRNIVRGPFEKFMRVTMILPLTGLQYSEKVAENCVTIWK 425
>gb|BU827970.1|BU827970 K013P59P Populus apical shoot cDNA library Populus tremula x
Populus tremuloides cDNA 5 prime, mRNA sequence
Length = 573
Score = 160 bits (344), Expect = 4e-039
Identities = 66/91 (72%), Positives = 72/91 (79%)
Frame = +1 / +3
Query: 133 FLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGD 312
FLGGAG RGLEI G FIKFTAIGVYLED ++ +L+ KW GKTA EL FFRD+VTG
Sbjct: 96 FLGGAGARGLEIEGKFIKFTAIGVYLEDNSLQSLSAKWKGKTAKELTDSVEFFRDIVTGP 275
Query: 313 FEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 276 FEKFMRVTMILPLTGLQYSEKVAENCVRIWK 368
>gb|CX169758.1|CX169758 D07_69-49_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 680
Score = 158 bits (340), Expect = 1e-038
Identities = 66/91 (72%), Positives = 71/91 (78%)
Frame = +1 / +3
Query: 133 FLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGD 312
FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL FFRD+V G
Sbjct: 93 FLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVEFFRDIVRGP 272
Query: 313 FEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 273 FEKFMRVTMILPLTGLQYSEKVAENCVTIWK 365
>gb|CX174673.1|CX174673 G10_69-32_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 506
Score = 158 bits (340), Expect = 1e-038
Identities = 66/91 (72%), Positives = 71/91 (78%)
Frame = +1 / +2
Query: 133 FLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGD 312
FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL FFRD+V G
Sbjct: 5 FLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVEFFRDIVRGP 184
Query: 313 FEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FEKF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 185 FEKFMRVTMILPLTGLQYSEKVAENCVTIWK 277
>gb|CK097265.1|CK097265 UB45DPE08.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB45DPE08 3', mRNA sequence
Length = 672
Score = 155 bits (334), Expect = 1e-037
Identities = 64/89 (71%), Positives = 70/89 (78%)
Frame = +1 / -2
Query: 139 GGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFE 318
GGAG RGLEI G FIKFTAIGVYLED ++ +L+ KW GKTA EL FFRD+VTG FE
Sbjct: 662 GGAGARGLEIEGKFIKFTAIGVYLEDNSLQSLSAKWKGKTAKELTDSVEFFRDIVTGPFE 483
Query: 319 KFTRVTMILPLTGEQYAEKVTENCVAFWK 405
KF RVTMILPLTG QY+EKV ENCV WK
Sbjct: 482 KFMRVTMILPLTGLQYSEKVAENCVRIWK 396
>gb|CK107070.1|CK107070 UB45DPE08.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB45DPE08 5', mRNA sequence
Length = 534
Score = 121 bits (258), Expect(2) = 3e-034
Identities = 49/71 (69%), Positives = 55/71 (77%)
Frame = +1 / +3
Query: 193 AIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAE 372
AIGVYLED ++ +L+ KW GKTA EL FFRD+VTG FEKF RVTMILPLTG QY+E
Sbjct: 177 AIGVYLEDNSLQSLSAKWKGKTAKELTDSVEFFRDIVTGPFEKFMRVTMILPLTGLQYSE 356
Query: 373 KVTENCVAFWK 405
KV ENCV WK
Sbjct: 357 KVAENCVRIWK 389
Score = 42.3 bits (86), Expect(2) = 3e-034
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = +1 / +2
Query: 133 FLGGAGVRGLEIGGNFIKFT 192
FLGGAG RGLEI G FIKFT
Sbjct: 116 FLGGAGARGLEIEGKFIKFT 175
>gb|CX169473.1|CX169473 B03_69-13_03.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 570
Score = 143 bits (307), Expect = 5e-034
Identities = 61/100 (61%), Positives = 70/100 (70%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGL+I G FIKFTAI V LED ++ LA KW G A+EL
Sbjct: 77 KPPASNNTLFLGGAGVRGLQIEGKFIKFTAIRVCLEDNSLH*LAAKWNGTIANELTDSVQ 256
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCVAFWK 405
FF D+V G F+KF VTMILPLTG QY+E V ENCV WK
Sbjct: 257 FFTDIVRGPFQKFMLVTMILPLTGLQYSENVAENCVTIWK 376
>gb|DT471446.1|DT471446 WS01213.BR_N24 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01213_N24 5', mRNA sequence
Length = 672
Score = 138 bits (295), Expect = 2e-032
Identities = 60/95 (63%), Positives = 66/95 (69%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A EL
Sbjct: 86 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVE 265
Query: 286 FFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENC 390
FFRD+V G FEKF RVTMILPLTG E C
Sbjct: 266 FFRDIVRGPFEKFMRVTMILPLTGLHIRRSCGELC 370
>gb|CV245654.1|CV245654 WS0259.B21_A10 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_A10 3', mRNA sequence
Length = 757
Score = 137 bits (293), Expect = 4e-032
Identities = 57/83 (68%), Positives = 62/83 (74%)
Frame = +1 / -1
Query: 157 GLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVT 336
GLEI G FIKFTAIGVYLED ++ +LA KW GK A EL FFRD+V G FEKF RVT
Sbjct: 754 GLEIEGKFIKFTAIGVYLEDNSLQSLAAKWKGKIAKELTDSVEFFRDIVRGPFEKFMRVT 575
Query: 337 MILPLTGEQYAEKVTENCVAFWK 405
MILPLTG QY+EKV ENC WK
Sbjct: 574 MILPLTGLQYSEKVAENCANIWK 506
>gb|CV256396.1|CV256396 WS0243.B21_L18 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0243_L18 3', mRNA sequence
Length = 760
Score = 133 bits (284), Expect = 8e-031
Identities = 56/82 (68%), Positives = 61/82 (74%)
Frame = +1 / -2
Query: 160 LEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTM 339
LEI G FIKFTAIGVYLED + +LA KW GK A EL FFRD+V G FEKF RV M
Sbjct: 759 LEIEGKFIKFTAIGVYLEDNSWQSLAAKWKGKIAKELTDSVEFFRDIVRGPFEKFMRVRM 580
Query: 340 ILPLTGEQYAEKVTENCVAFWK 405
ILPLTG QY+EKV ENCV+ WK
Sbjct: 579 ILPLTGLQYSEKVAENCVSIWK 514
>gb|DN502181.1|DN502181 V057F01.5pR Populus male catkins cDNA library Populus trichocarpa
cDNA clone V057F01 5', mRNA sequence
Length = 687
Score = 79.0 bits (166), Expect(2) = 2e-023
Identities = 33/54 (61%), Positives = 38/54 (70%)
Frame = +1 / +3
Query: 211 EDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAE 372
+D ++ +LA KW GK A EL FFRD+V G FEKF RVTMILPLTG QY E
Sbjct: 345 KDNSLQSLAAKWKGKIAKELTDSVEFFRDIVRGPFEKFMRVTMILPLTGLQYLE 506
Score = 48.7 bits (100), Expect(2) = 2e-023
Identities = 20/29 (68%), Positives = 22/29 (75%)
Frame = +1 / +1
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFT 192
+PP S + FLGGAGVRGLEI G FIK T
Sbjct: 268 KPPASNNTLFLGGAGVRGLEIEGKFIKIT 354
>gb|DT525812.1|DT525812 WS02046.C21_F18 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02046_F18 3', mRNA sequence
Length = 868
Score = 107 bits (228), Expect = 4e-023
Identities = 45/68 (66%), Positives = 51/68 (75%)
Frame = +1 / +2
Query: 106 RPPGSAGSHFLGGAGVRGLEIGGNFIKFTAIGVYLEDAAVPALAKKWGGKTADELASDAA 285
+PP S + FLGGAGVRGLEI G FIKFTAIGVYLED ++ +LA KW GK A ELA
Sbjct: 665 KPPASNNTLFLGGAGVRGLEIEGKFIKFTAIGVYLEDKSLESLAAKWKGKIAKELADSVE 844
Query: 286 FFRDVVTG 309
FFRD+V G
Sbjct: 845 FFRDIVRG 868
>gb|BU891967.1|BU891967 P057F08 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 688
Score = 104 bits (221), Expect = 4e-022
Identities = 42/64 (65%), Positives = 47/64 (73%)
Frame = +1 / +1
Query: 214 DAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENCV 393
D + +L+ KW GKTA EL FFRD+VTG FEKF RVTMILPLTG QY+EKV ENCV
Sbjct: 13 DNSPQSLSAKWKGKTAKELTDSVEFFRDIVTGPFEKFMRVTMILPLTGLQYSEKVAENCV 192
Query: 394 AFWK 405
WK
Sbjct: 193 RIWK 204
>gb|CV235377.1|CV235377 WS01218.B21_O09 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01218_O09 3', mRNA sequence
Length = 705
Score = 101 bits (215), Expect = 2e-021
Identities = 41/65 (63%), Positives = 47/65 (72%)
Frame = +1 / -2
Query: 211 EDAAVPALAKKWGGKTADELASDAAFFRDVVTGDFEKFTRVTMILPLTGEQYAEKVTENC 390
ED ++ +LA KW GK A EL FFRD+V G EKF RVTMILPLTG QY+EKV ENC
Sbjct: 704 EDNSLQSLAAKWKGKIAKELTDSVEFFRDIVRGPXEKFMRVTMILPLTGLQYSEKVAENC 525
Query: 391 VAFWK 405
V+ WK
Sbjct: 524 VSIWK 510
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 97,242,344
Number of Sequences: 369679
Number of extensions: 699690
Number of successful extensions: 34920
Number of sequences better than 1.0e-020: 56
length of database: 67,802,888
effective HSP length: 50
effective length of database: 49,318,938
effective search space used: 4192109730
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)