TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3204317.2.1
(607 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library... 229 1e-059
gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid lib... 226 7e-059
gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus... 226 7e-059
gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Popul... 226 7e-059
gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Popu... 226 7e-059
gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA librar... 204 3e-052
gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Popul... 129 1e-045
gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA librar... 115 2e-045
gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Popul... 171 2e-042
gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus t... 171 2e-042
gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated wi... 171 3e-042
gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated wit... 169 2e-041
gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDN... 135 2e-040
gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus t... 77 3e-033
gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus t... 77 3e-033
gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Popu... 77 3e-033
gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus t... 77 3e-033
gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA libr... 77 3e-033
gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal libr... 76 5e-033
gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Po... 122 1e-027
gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDN... 71 2e-027
gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA librar... 75 6e-027
gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus tricho... 92 1e-025
gb|BP932598.1|BP932598 BP932598 full-length enriched poplar... 65 2e-025
gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library... 114 6e-025
gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated wit... 114 6e-025
gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Po... 64 6e-024
gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichoca... 63 8e-024
gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Po... 73 1e-023
gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populu... 66 1e-023
gb|BU810699.1|BU810699 UL74PC01 Populus leaf cDNA library P... 108 4e-023
gb|CK097994.1|CK097994 A001P37.5pR Hybrid aspen plasmid lib... 67 1e-022
gb|CK092448.1|CK092448 G084P08.3pR Populus tension wood cDN... 104 5e-022
gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leave... 65 8e-022
>gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 617
Score = 229 bits (494), Expect = 1e-059
Identities = 85/138 (61%), Positives = 104/138 (75%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y+++GVPIGPRANS+WLY VPWG+YKAV Y+KE+YGNPT++LSENGMDDPGN T
Sbjct: 162 WNVGFAYKKNGVPIGPRANSNWLYNVPWGMYKAVMYIKERYGNPTIILSENGMDDPGNFT 341
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
++ +LK A D GAN GYFAWSLLDNFEW+ GYTSRFG+VYVD+
Sbjct: 342 RSKALHDTTRVGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYTSRFGIVYVDY 521
Query: 246 RTLRRYPKSSAYWFRDVI 193
L+RYPK SAYWF+ ++
Sbjct: 522 TNLKRYPKMSAYWFKKLL 575
Score = 138 bits (295), Expect = 4e-032
Identities = 73/132 (55%), Positives = 84/132 (63%)
Frame = +2 / -2
Query: 182 LLPAMTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAA 361
L + + LNQ A++LG ++ ST T PN +V P HSKLSSND AK P +LAP S A
Sbjct: 586 LFRSSSFLNQ*ADILGYLFRLV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAPSSAAF 407
Query: 362 FSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*S 541
FS * * TL S + V LPGSSIPFSD IVG P S +TALY P GT+*S
Sbjct: 406 FS*VK*ALK*PTLVVSCNAFERVKLPGSSIPFSDSIIVGFP*RSFMYITALYIPHGTL*S 227
Query: 542 QSEFALGPIGTP 577
Q EFALGPIGTP
Sbjct: 226 QLEFALGPIGTP 191
>gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 3', mRNA sequence
Length = 816
Score = 226 bits (489), Expect = 7e-059
Identities = 86/138 (62%), Positives = 104/138 (75%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y++ GV IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSENGMDDPGN+T
Sbjct: 524 WNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLT 345
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
++ ++LK A D GAN VGYFAWSLLDNFEW+LGYTSRFG+VYVD+
Sbjct: 344 RSKALQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDY 165
Query: 246 RTLRRYPKSSAYWFRDVI 193
L+RYPK SA WF+ ++
Sbjct: 164 SNLKRYPKMSANWFKHLL 111
Score = 140 bits (300), Expect = 8e-033
Identities = 74/125 (59%), Positives = 82/125 (65%)
Frame = +2 / +1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ A++ G + ST T PN +V P+ HSKLSSNDQAKYPT+LAP S A FS *
Sbjct: 121 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 300
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
** L S V LPGSSIPFSD IVG P SL +TALY P GT+*SQ EFALG
Sbjct: 301 L**PILVVSCNALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 480
Query: 563 PIGTP 577
PI TP
Sbjct: 481 PISTP 495
>gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_P11 3', mRNA sequence
Length = 667
Score = 226 bits (489), Expect = 7e-059
Identities = 86/138 (62%), Positives = 104/138 (75%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y++ GV IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSENGMDDPGN+T
Sbjct: 522 WNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLT 343
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
++ ++LK A D GAN VGYFAWSLLDNFEW+LGYTSRFG+VYVD+
Sbjct: 342 RSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDY 163
Query: 246 RTLRRYPKSSAYWFRDVI 193
L+RYPK SA WF+ ++
Sbjct: 162 SNLKRYPKMSANWFKHLL 109
Score = 139 bits (299), Expect = 1e-032
Identities = 74/125 (59%), Positives = 82/125 (65%)
Frame = +2 / +2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ A++ G + ST T PN +V P+ HSKLSSNDQAKYPT+LAP S A FS *
Sbjct: 119 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 298
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
** L S V LPGSSIPFSD IVG P SL +TALY P GT+*SQ EFALG
Sbjct: 299 L**PILVVSCIALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 478
Query: 563 PIGTP 577
PI TP
Sbjct: 479 PISTP 493
>gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 5', mRNA sequence
Length = 673
Score = 226 bits (489), Expect = 7e-059
Identities = 86/138 (62%), Positives = 104/138 (75%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y++ GV IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSENGMDDPGN+T
Sbjct: 149 WNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLT 328
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
++ ++LK A D GAN VGYFAWSLLDNFEW+LGYTSRFG+VYVD+
Sbjct: 329 RSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDY 508
Query: 246 RTLRRYPKSSAYWFRDVI 193
L+RYPK SA WF+ ++
Sbjct: 509 SNLKRYPKMSANWFKHLL 562
Score = 139 bits (299), Expect = 1e-032
Identities = 74/125 (59%), Positives = 82/125 (65%)
Frame = +2 / -2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ A++ G + ST T PN +V P+ HSKLSSNDQAKYPT+LAP S A FS *
Sbjct: 552 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 373
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
** L S V LPGSSIPFSD IVG P SL +TALY P GT+*SQ EFALG
Sbjct: 372 L**PILVVSCIALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 193
Query: 563 PIGTP 577
PI TP
Sbjct: 192 PISTP 178
>gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 3', mRNA sequence
Length = 673
Score = 226 bits (489), Expect = 7e-059
Identities = 86/138 (62%), Positives = 104/138 (75%)
Frame = -2 / -2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y++ GV IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSENGMDDPGN+T
Sbjct: 525 WNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLT 346
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
++ ++LK A D GAN VGYFAWSLLDNFEW+LGYTSRFG+VYVD+
Sbjct: 345 RSKAMQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDY 166
Query: 246 RTLRRYPKSSAYWFRDVI 193
L+RYPK SA WF+ ++
Sbjct: 165 SNLKRYPKMSANWFKHLL 112
Score = 139 bits (299), Expect = 1e-032
Identities = 74/125 (59%), Positives = 82/125 (65%)
Frame = +2 / +2
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ A++ G + ST T PN +V P+ HSKLSSNDQAKYPT+LAP S A FS *
Sbjct: 122 LNQLADIFGYLLRLE*STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*A 301
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
** L S V LPGSSIPFSD IVG P SL +TALY P GT+*SQ EFALG
Sbjct: 302 L**PILVVSCIALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALG 481
Query: 563 PIGTP 577
PI TP
Sbjct: 482 PISTP 496
>gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 476
Score = 204 bits (441), Expect = 3e-052
Identities = 79/125 (63%), Positives = 94/125 (75%)
Frame = -2 / +1
Query: 567 IGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXX 388
IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSENGMDDPGN+T ++
Sbjct: 4 IGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKALQDTTRIGY 183
Query: 387 XXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYW 208
++LK A GAN VGYFAWSLLDNFEW GYTSRFG+VYVD+ L+RYPK SA W
Sbjct: 184 YKAYLSQLKKAAVDGANLVGYFAWSLLDNFEWTSGYTSRFGIVYVDYSNLKRYPKMSANW 363
Query: 207 FRDVI 193
F+ ++
Sbjct: 364 FKHLL 378
Score = 133 bits (284), Expect = 1e-030
Identities = 71/122 (58%), Positives = 79/122 (64%)
Frame = +2 / -1
Query: 203 LNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*L 382
LNQ A++ G + ST T PN +V P HSKLSSNDQAKYPT+LAP + A FS *
Sbjct: 368 LNQLADIFGYLLRLE*STYTIPNLEV*PDVHSKLSSNDQAKYPTKLAPSTAAFFS*DK*A 189
Query: 383 R**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALG 562
** L S V LPGSSIPFSD IVG P SL +TALY P GT+*SQ EFALG
Sbjct: 188 L**PILVVSCNALERVRLPGSSIPFSDSIIVGFP*RSLMYITALYMPHGTL*SQ*EFALG 9
Query: 563 PI 568
PI
Sbjct: 8 PI 3
>gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_N05 3', mRNA sequence
Length = 894
Score = 129 bits (276), Expect(2) = 1e-045
Identities = 49/88 (55%), Positives = 60/88 (68%)
Frame = -2 / -3
Query: 456 NGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGYT 277
+GMDDPGN T ++ +LK A D GAN GYFAWSLLDNFEW+ GYT
Sbjct: 373 SGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYT 194
Query: 276 SRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
SRFG+VYVD+ L+RYPK SAYWF+ ++
Sbjct: 193 SRFGIVYVDYTNLKRYPKMSAYWFKKLL 110
Score = 76.2 bits (160), Expect(2) = 8e-021
Identities = 44/91 (48%), Positives = 53/91 (58%)
Frame = +2 / +3
Query: 182 LLPAMTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAA 361
L + + LNQ A++LG ++ ST T PN +V P HSKLSSND AK P +LAP S A
Sbjct: 99 LFRSSSFLNQ*ADILGYLFRLV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAPSSAAF 278
Query: 362 FSSAT*LR**ATLAASRTPWATVTLPGSSIP 454
FS * * L S + V LPGSSIP
Sbjct: 279 FS*VK*ALK*PILVVSCNAFERVKLPGSSIP 371
Score = 73.9 bits (155), Expect(2) = 1e-045
Identities = 25/33 (75%), Positives = 31/33 (93%)
Frame = -2 / -1
Query: 546 DWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGM 448
+WLY VPWG+YKAV Y+KE+YGNPT++LSENGM
Sbjct: 588 NWLYNVPWGMYKAVMYIKERYGNPTIILSENGM 490
Score = 43.7 bits (89), Expect(2) = 8e-021
Identities = 21/35 (60%), Positives = 23/35 (65%)
Frame = +2 / +2
Query: 449 IPFSDRSIVGLPYFSLT*VTALYSPQGTM*SQSEF 553
IPFSD IVGLP S +TALY P GT+ SQ F
Sbjct: 491 IPFSDSIIVGLP*RSFMYITALYIPHGTLYSQLGF 595
>gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 399
Score = 115 bits (245), Expect(2) = 2e-045
Identities = 45/76 (59%), Positives = 54/76 (71%)
Frame = -2 / +3
Query: 459 ENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEWKLGY 280
ENGMDDPGN+T ++ ++LK A D GAN VGYFAWSLLDNFEW+LGY
Sbjct: 171 ENGMDDPGNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGY 350
Query: 279 TSRFGLVYVDFRTLRR 232
TSRFG+VYVD+ L+R
Sbjct: 351 TSRFGIVYVDYSNLKR 398
Score = 87.2 bits (184), Expect(2) = 2e-045
Identities = 32/42 (76%), Positives = 37/42 (88%)
Frame = -2 / +1
Query: 582 RDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSE 457
+ GV IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSE
Sbjct: 46 KKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSE 171
Score = 81.7 bits (172), Expect(2) = 1e-026
Identities = 43/70 (61%), Positives = 46/70 (65%)
Frame = +2 / -3
Query: 251 ST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWATV 430
ST T PN +V P+ HSKLSSNDQAKYPT+LAP S A FS * ** L S V
Sbjct: 379 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*AL**PILVVSCNALERV 200
Query: 431 TLPGSSIPFS 460
LPGSSIPFS
Sbjct: 199 RLPGSSIPFS 170
Score = 57.4 bits (119), Expect(2) = 1e-026
Identities = 27/40 (67%), Positives = 29/40 (72%)
Frame = +2 / -2
Query: 458 SDRSIVGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
SD IVG P SL +TALY P GT+*SQ EFALGPI TP
Sbjct: 170 SDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTP 51
>gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_E17 3', mRNA sequence
Length = 832
Score = 171 bits (369), Expect = 2e-042
Identities = 65/108 (60%), Positives = 79/108 (73%)
Frame = -2 / -3
Query: 516 YKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGAN 337
YKAV Y+KE+YGNPT++LSENGMDDPGN T ++ +LK A D GAN
Sbjct: 830 YKAVMYIKERYGNPTIILSENGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGAN 651
Query: 336 CVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
GYFAWSLLDNFEW+ GYTSRFG+VYVD+ L+RYPK SAYWF+ ++
Sbjct: 650 LAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTNLKRYPKMSAYWFKKLL 507
Score = 100 bits (213), Expect = 8e-021
Identities = 57/112 (50%), Positives = 67/112 (59%)
Frame = +2 / +1
Query: 182 LLPAMTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAA 361
L + + LNQ A++LG ++ ST T PN +V P HSKLSSND AK P +LAP S A
Sbjct: 496 LFRSSSFLNQ*ADILGYLFRLV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAPSSAAF 675
Query: 362 FSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALY 517
FS * * L S + V LPGSSIPFSD IVGLP S +TALY
Sbjct: 676 FS*VK*ALK*PILVVSCNAFERVKLPGSSIPFSDSIIVGLP*RSFMYITALY 831
>gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_P15 3', mRNA sequence
Length = 479
Score = 171 bits (369), Expect = 2e-042
Identities = 65/108 (60%), Positives = 79/108 (73%)
Frame = -2 / -2
Query: 516 YKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGAN 337
YKAV Y+KE+YGNPT++LSENGMDDPGN T ++ +LK A D GAN
Sbjct: 478 YKAVMYIKERYGNPTIILSENGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGAN 299
Query: 336 CVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
GYFAWSLLDNFEW+ GYTSRFG+VYVD+ L+RYPK SAYWF+ ++
Sbjct: 298 LAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTNLKRYPKMSAYWFKKLL 155
Score = 100 bits (213), Expect = 8e-021
Identities = 57/112 (50%), Positives = 67/112 (59%)
Frame = +2 / +3
Query: 182 LLPAMTSLNQYAELLG*RRSVLKST*TRPNRDVYPSFHSKLSSNDQAKYPTQLAPPSIAA 361
L + + LNQ A++LG ++ ST T PN +V P HSKLSSND AK P +LAP S A
Sbjct: 144 LFRSSSFLNQ*ADILGYLFRLV*STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAPSSAAF 323
Query: 362 FSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VTALY 517
FS * * L S + V LPGSSIPFSD IVGLP S +TALY
Sbjct: 324 FS*VK*ALK*PILVVSCNAFERVKLPGSSIPFSDSIIVGLP*RSFMYITALY 479
>gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 443
Score = 171 bits (368), Expect = 3e-042
Identities = 65/108 (60%), Positives = 82/108 (75%)
Frame = -2 / +3
Query: 516 YKAVTYVKEKYGNPTMLLSENGMDDPGNVTVAQGXXXXXXXXXXXXXXAELKAAIDGGAN 337
++AV Y+KE+YGNPTM+LSENGMDDPGN+T ++ ++LK A D GAN
Sbjct: 3 HEAVMYIKERYGNPTMILSENGMDDPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGAN 182
Query: 336 CVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
VGYFAWSLLDNFEW+LGYTSRFG+VYVD+ L+RYPK SA WF+ ++
Sbjct: 183 MVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLKRYPKMSANWFKHLL 326
>gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 643
Score = 169 bits (363), Expect = 2e-041
Identities = 65/105 (61%), Positives = 76/105 (72%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y++ GV IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSENGMDDPGN+T
Sbjct: 329 WNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLT 508
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVGYFAWSLLDNFEW 292
++ ++LK A D GAN VGYFAWSLLDNFEW
Sbjct: 509 RSKAMQDTTRIGYYKAYLSQLKKAADDGANMVGYFAWSLLDNFEW 643
Score = 119 bits (254), Expect = 2e-026
Identities = 62/95 (65%), Positives = 64/95 (67%)
Frame = +2 / -2
Query: 293 HSKLSSNDQAKYPTQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSI 472
HSKLSSNDQAKYPT LAP S A FS * ** L S V LPGSSIPFSD I
Sbjct: 642 HSKLSSNDQAKYPTILAPSSAAFFS*DK*AL**PILVVSCIALERVRLPGSSIPFSDSII 463
Query: 473 VGLPYFSLT*VTALYSPQGTM*SQSEFALGPIGTP 577
VG P SL +TALY P GT+*SQ EFALGPI TP
Sbjct: 462 VGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTP 358
>gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G084P08 5', mRNA sequence
Length = 416
Score = 135 bits (289), Expect(2) = 2e-040
Identities = 53/93 (56%), Positives = 64/93 (68%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y++ GV IGPRANS WLY VPWG+YKAV Y+KE+YGNPTM+LSENGMDDPGN+T
Sbjct: 23 WNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLT 202
Query: 426 VAQGXXXXXXXXXXXXXXAELKAAIDGGANCVG 328
++ ++LK A D GAN VG
Sbjct: 203 RSKALQDTTRIGYYKAYLSQLKKAADDGANLVG 301
Score = 93.2 bits (197), Expect(2) = 1e-023
Identities = 50/83 (60%), Positives = 53/83 (63%)
Frame = +2 / -3
Query: 329 PTQLAPPSIAAFSSAT*LR**ATLAASRTPWATVTLPGSSIPFSDRSIVGLPYFSLT*VT 508
PT+LAP S A FS * ** L S V LPGSSIPFSD IVG P SL +T
Sbjct: 300 PTKLAPSSAAFFS*DK*AL**PILVVSCNALERVRLPGSSIPFSDSIIVGFP*RSLMYIT 121
Query: 509 ALYSPQGTM*SQSEFALGPIGTP 577
ALY P GT+*SQ EFALGPI TP
Sbjct: 120 ALYIPHGTL*SQ*EFALGPISTP 52
Score = 50.6 bits (104), Expect(2) = 2e-040
Identities = 18/21 (85%), Positives = 19/21 (90%)
Frame = -2 / +1
Query: 330 GYFAWSLLDNFEWKLGYTSRF 268
G F WSLLDNFEW+LGYTSRF
Sbjct: 301 GTFDWSLLDNFEWRLGYTSRF 363
Score = 35.9 bits (72), Expect(2) = 1e-023
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +2 / -1
Query: 269 NRDVYPSFHSKLSSNDQAKYP 331
N +V P+ HSKLSSNDQ+K P
Sbjct: 362 NLEV*PNLHSKLSSNDQSKVP 300
>gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_A18 3', mRNA sequence
Length = 916
Score = 76.7 bits (161), Expect(3) = 3e-033
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -2 / -2
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G PIG +A S+WLY+ PWGL K + Y+ +KY NPT+ ++ENGMDD
Sbjct: 738 GEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMDD 604
Score = 72.1 bits (151), Expect(3) = 3e-033
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI G GYFAWSLLDNFEW GYT RFGLVYVD++
Sbjct: 516 AIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYK 403
Score = 30.9 bits (61), Expect(3) = 3e-033
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PKSSAYWF + G
Sbjct: 396 LSRHPKSSAYWFMRFLKG 343
>gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O23 3', mRNA sequence
Length = 914
Score = 76.7 bits (161), Expect(3) = 3e-033
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -2 / -1
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G PIG +A S+WLY+ PWGL K + Y+ +KY NPT+ ++ENGMDD
Sbjct: 683 GEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMDD 549
Score = 72.1 bits (151), Expect(3) = 3e-033
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -1
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI G GYFAWSLLDNFEW GYT RFGLVYVD++
Sbjct: 461 AIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYK 348
Score = 30.9 bits (61), Expect(3) = 3e-033
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PKSSAYWF + G
Sbjct: 341 LARHPKSSAYWFMRFLKG 288
>gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 3', mRNA sequence
Length = 910
Score = 76.7 bits (161), Expect(3) = 3e-033
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -2 / -3
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G PIG +A S+WLY+ PWGL K + Y+ +KY NPT+ ++ENGMDD
Sbjct: 569 GEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMDD 435
Score = 72.1 bits (151), Expect(3) = 3e-033
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI G GYFAWSLLDNFEW GYT RFGLVYVD++
Sbjct: 347 AIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYK 234
Score = 30.9 bits (61), Expect(3) = 3e-033
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PKSSAYWF + G
Sbjct: 227 LSRHPKSSAYWFMRFLKG 174
>gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_D09 3', mRNA sequence
Length = 885
Score = 76.7 bits (161), Expect(3) = 3e-033
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -2 / -3
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G PIG +A S+WLY+ PWGL K + Y+ +KY NPT+ ++ENGMDD
Sbjct: 715 GEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMDD 581
Score = 72.1 bits (151), Expect(3) = 3e-033
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -3
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI G GYFAWSLLDNFEW GYT RFGLVYVD++
Sbjct: 493 AIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYK 380
Score = 30.9 bits (61), Expect(3) = 3e-033
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PKSSAYWF + G
Sbjct: 373 LSRHPKSSAYWFMRFLKG 320
>gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F008P84 3', mRNA sequence
Length = 793
Score = 76.7 bits (161), Expect(3) = 3e-033
Identities = 26/45 (57%), Positives = 35/45 (77%)
Frame = -2 / -2
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G PIG +A S+WLY+ PWGL K + Y+ +KY NPT+ ++ENGMDD
Sbjct: 663 GEPIGEKAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMDD 529
Score = 72.1 bits (151), Expect(3) = 3e-033
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / -2
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI G GYFAWSLLDNFEW GYT RFGLVYVD++
Sbjct: 441 AIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYK 328
Score = 30.9 bits (61), Expect(3) = 3e-033
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PKSSAYWF + G
Sbjct: 321 LSRHPKSSAYWFMRFLKG 268
>gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 742
Score = 75.8 bits (159), Expect(3) = 5e-033
Identities = 26/45 (57%), Positives = 34/45 (75%)
Frame = -2 / +2
Query: 576 GVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
G PIG +A S+WLY+ PWGL K + Y+ KY NPT+ ++ENGMDD
Sbjct: 113 GEPIGEKAASEWLYVCPWGLRKVLNYLARKYNNPTIYVTENGMDD 247
Score = 72.1 bits (151), Expect(3) = 5e-033
Identities = 27/38 (71%), Positives = 29/38 (76%)
Frame = -2 / +2
Query: 357 AIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
AI G GYFAWSLLDNFEW GYT RFGLVYVD++
Sbjct: 335 AIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYK 448
Score = 30.9 bits (61), Expect(3) = 5e-033
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +2
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PKSSAYWF + G
Sbjct: 455 LARHPKSSAYWFMRFLKG 508
>gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 484
Score = 122 bits (262), Expect = 1e-027
Identities = 43/60 (71%), Positives = 53/60 (88%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
W F Y+++GVPIGPR NS+WLY VPWG+YKAV Y+KE+YGNPT++LSENGMDDPGN+T
Sbjct: 275 WNVGFAYKKNGVPIGPRENSNWLYNVPWGMYKAVMYIKERYGNPTIILSENGMDDPGNLT 454
>gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 3', mRNA sequence
Length = 824
Score = 71.2 bits (149), Expect(4) = 2e-027
Identities = 24/39 (61%), Positives = 34/39 (87%)
Frame = -2 / -3
Query: 558 RANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDD 442
+A S WL+IVPWG++K + YVK+KYGNP ++++ENGMDD
Sbjct: 513 QAASRWLHIVPWGIHKLLKYVKDKYGNPPVVITENGMDD 397
Score = 62.5 bits (130), Expect(4) = 2e-027
Identities = 22/29 (75%), Positives = 25/29 (86%)
Frame = -2 / -3
Query: 330 GYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
GYFAWSLLDN+EW GYT RFGL +VD+R
Sbjct: 276 GYFAWSLLDNWEWNSGYTVRFGLYFVDYR 190
Score = 24.4 bits (47), Expect(4) = 2e-027
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -2 / -3
Query: 240 LRRYPKSSAYWFRDVI 193
L R PK+SA WF+ +
Sbjct: 183 LTRVPKASAEWFKSTL 136
Score = 21.7 bits (41), Expect(4) = 2e-027
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -3 / -1
Query: 443 TRATSRWPRACATRRGWPTTGATSPS 366
TR + R C T R TTG SP+
Sbjct: 392 TRRSYL*ARPCRTTRE*NTTGTISPT 315
>gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041F03 3', mRNA sequence
Length = 842
Score = 75.3 bits (158), Expect(2) = 6e-027
Identities = 28/48 (58%), Positives = 35/48 (72%)
Frame = -2 / -1
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPK 223
L A+ GA+ GYFAWS LDNFEW GYT RFGL +VD+ T++R P+
Sbjct: 290 LLTAMKKGADVRGYFAWSFLDNFEWTFGYTRRFGLYHVDYTTMKRTPR 147
Score = 65.2 bits (136), Expect(2) = 6e-027
Identities = 24/51 (47%), Positives = 34/51 (66%)
Frame = -2 / -1
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGN 433
E+DGVPIG + DW+++ G+ K VTYVKE+Y N M+++ENG N
Sbjct: 515 EKDGVPIGKPSEVDWIHVYSRGMEKMVTYVKERYNNIPMIITENGYSQVSN 363
>gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_E15 5', mRNA sequence
Length = 727
Score = 92.3 bits (195), Expect(2) = 1e-025
Identities = 37/59 (62%), Positives = 44/59 (74%)
Frame = -2 / -2
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVIA 190
L+ A+ GA+ GYFAWSLLDNFEW GYT RFGL +VDF TL+R K SA W++D IA
Sbjct: 492 LETAVRKGADVRGYFAWSLLDNFEWTSGYTIRFGLYHVDFSTLKRTRKLSATWYKDYIA 316
Score = 43.7 bits (89), Expect(2) = 1e-025
Identities = 20/54 (37%), Positives = 28/54 (51%)
Frame = -2 / -2
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
++D IG D L G+ K VTY K++Y N M ++ENG + NV V
Sbjct: 717 QKDXXXIGQXTAXDXLXXXXQGMEKLVTYXKDRYNNIPMYITENGYCEEENVNV 556
>gb|BP932598.1|BP932598 BP932598 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-038_A02.r 3', mRNA sequence
Length = 644
Score = 64.8 bits (135), Expect(4) = 2e-025
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -2 / -2
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
L AI GAN GY+ W+ D+FEW GYT RFG++Y+DF+
Sbjct: 430 LSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDFK 308
Score = 57.9 bits (120), Expect(4) = 2e-025
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = -2 / -2
Query: 570 PIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
PIG +WL+I P G+Y + YV++KY NP + ++ENG+ D N ++
Sbjct: 640 PIGTPTALNWLFIYPKGIYDLMLYVRDKYKNPPLYITENGLADANNASL 494
Score = 27.2 bits (53), Expect(4) = 2e-025
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFR 202
L+RY K SAYWF+
Sbjct: 301 LKRYMKYSAYWFK 263
Score = 22.1 bits (42), Expect(4) = 2e-025
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -2 / -1
Query: 27 SYTKKKKKK 1
S+TKKKKKK
Sbjct: 38 SFTKKKKKK 12
>gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 591
Score = 114 bits (243), Expect = 6e-025
Identities = 40/57 (70%), Positives = 49/57 (85%)
Frame = -2 / +2
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPG 436
W F Y+++GVPIGPRA S+WLY VPWG+YKAV Y+KE+YGNPT++LS NGMDDPG
Sbjct: 419 WNVGFAYKKNGVPIGPRATSNWLYNVPWGMYKAVMYIKERYGNPTIILSXNGMDDPG 589
>gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 337
Score = 114 bits (243), Expect = 6e-025
Identities = 42/59 (71%), Positives = 50/59 (84%)
Frame = -2 / +3
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
+LK A D GAN VGYFAWSLLDNFEW+LGYTSRFG+VYVD+ L+RYPK SA WF+ ++
Sbjct: 42 QLKKAADDGANMVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLKRYPKMSANWFKHLL 218
>gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02015A05 5', mRNA sequence
Length = 614
Score = 64.3 bits (134), Expect(3) = 6e-024
Identities = 24/41 (58%), Positives = 28/41 (68%)
Frame = -2 / -2
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
L AI GAN Y+ WS LD+FEW GYT RFG+ YVDF+
Sbjct: 322 LLKAIQKGANVKAYYIWSFLDDFEWDAGYTVRFGVTYVDFK 200
Score = 58.8 bits (122), Expect(3) = 6e-024
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = -2 / -2
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGM 448
E++GVPIG + +WLY+ P G+ + Y+K+ Y NP + ++ENG+
Sbjct: 541 EKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNYKNPPVFITENGI 404
Score = 24.9 bits (48), Expect(3) = 6e-024
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -2
Query: 240 LRRYPKSSAYWFR 202
L+RY KSSA WF+
Sbjct: 193 LKRYLKSSARWFQ 155
>gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_O18 5', mRNA sequence
Length = 789
Score = 63.4 bits (132), Expect(3) = 8e-024
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = -2 / -1
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGN 433
E++G IGP+A S WLY+ P G+ + Y K++Y NPT+ ++ENG+ D N
Sbjct: 702 EKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRYRNPTIYITENGVSDFNN 550
Score = 53.8 bits (111), Expect(3) = 8e-024
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = -2 / -1
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDF 247
L++ + G GYFAW+ D+FEW GYT RFGL Y D+
Sbjct: 471 LRSIENYGTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDY 352
Score = 30.4 bits (60), Expect(3) = 8e-024
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFRDVIAGS 184
L RYPK S +WF + + GS
Sbjct: 342 LHRYPKRSVHWFTNFLKGS 286
>gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 668
Score = 73.0 bits (153), Expect(4) = 1e-023
Identities = 28/41 (68%), Positives = 30/41 (73%)
Frame = -2 / +3
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
L AI G GYFAWSLLDNFEW GYT RFGLVYVD++
Sbjct: 192 LAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDYK 314
Score = 33.1 bits (66), Expect(4) = 1e-023
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -2 / +2
Query: 540 LYIVPWGLYKAVTYVKEKY 484
LY+ PWGL K + Y+ +KY
Sbjct: 14 LYVCPWGLRKVLNYLAQKY 70
Score = 30.4 bits (60), Expect(4) = 1e-023
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -2 / +3
Query: 240 LRRYPKSSAYWFRDVIAG 187
L R+PKSSAYWF + G
Sbjct: 321 LSRHPKSSAYWFLRFLKG 374
Score = 27.6 bits (54), Expect(4) = 1e-023
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -2 / +3
Query: 480 NPTMLLSENGMDD 442
NPT+ ++ENGMDD
Sbjct: 75 NPTIYVTENGMDD 113
>gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_F08 3', mRNA sequence
Length = 879
Score = 65.7 bits (137), Expect(2) = 1e-023
Identities = 22/41 (53%), Positives = 30/41 (73%)
Frame = -2 / -1
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
L+ A+ G GYFAWS LD+FEW GYT RFG++Y+D++
Sbjct: 432 LRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVRFGIIYIDYK 310
Score = 63.8 bits (133), Expect(2) = 1e-023
Identities = 22/51 (43%), Positives = 36/51 (70%)
Frame = -2 / -1
Query: 585 ERDGVPIGPRANSDWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGN 433
+R+GV IGP+A S WL++ P G+ K + Y K+KY +P + ++ENG+ + N
Sbjct: 660 DRNGVLIGPQAGSTWLHVYPKGIRKLLLYTKKKYNDPVIYITENGVSEVNN 508
>gb|BU810699.1|BU810699 UL74PC01 Populus leaf cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 299
Score = 108 bits (230), Expect = 4e-023
Identities = 39/53 (73%), Positives = 46/53 (86%)
Frame = -2 / +3
Query: 351 DGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPKSSAYWFRDVI 193
D GAN VGYFAWSLLDNFEW+LGYTSRFG+VYVD+ L+RYPK SA WF+ ++
Sbjct: 48 DDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLKRYPKMSANWFKHLL 206
>gb|CK097994.1|CK097994 A001P37.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 5', mRNA sequence
Length = 528
Score = 66.6 bits (139), Expect(2) = 1e-022
Identities = 24/29 (82%), Positives = 28/29 (96%)
Frame = -2 / +1
Query: 513 KAVTYVKEKYGNPTMLLSENGMDDPGNVT 427
KAV Y+KE+YGNPTM+LSENGMDDPGN+T
Sbjct: 430 KAVMYIKERYGNPTMILSENGMDDPGNLT 516
Score = 59.7 bits (124), Expect(2) = 1e-022
Identities = 21/32 (65%), Positives = 24/32 (75%)
Frame = -2 / +3
Query: 606 WPPKFVYERDGVPIGPRANSDWLYIVPWGLYK 511
W F Y++ GV IGPRANS WLY VPWG+YK
Sbjct: 336 WNAGFAYKKKGVEIGPRANSYWLYNVPWGMYK 431
>gb|CK092448.1|CK092448 G084P08.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G084P08 3', mRNA sequence
Length = 207
Score = 104 bits (222), Expect = 5e-022
Identities = 39/49 (79%), Positives = 44/49 (89%)
Frame = -2 / -3
Query: 369 ELKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFRTLRRYPK 223
+LK A D GAN VGYFAWSLLDNFEW+LGYTSRFG+VYVD+ TL+RYPK
Sbjct: 148 QLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSTLKRYPK 2
>gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C092P56 3', mRNA sequence
Length = 543
Score = 64.8 bits (135), Expect(3) = 8e-022
Identities = 22/41 (53%), Positives = 29/41 (70%)
Frame = -2 / -1
Query: 366 LKAAIDGGANCVGYFAWSLLDNFEWKLGYTSRFGLVYVDFR 244
L AI GAN GY+ W+ D+FEW GYT RFG++Y+DF+
Sbjct: 345 LSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDFK 223
Score = 48.7 bits (100), Expect(3) = 8e-022
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = -2 / -1
Query: 546 DWLYIVPWGLYKAVTYVKEKYGNPTMLLSENGMDDPGNVTV 424
+WL+I G+Y + YV++KY NP + ++ENG+ D N ++
Sbjct: 531 NWLFIYRKGIYDLMLYVRDKYKNPPIYITENGLADANNASL 409
Score = 27.2 bits (53), Expect(3) = 8e-022
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = -2 / -1
Query: 240 LRRYPKSSAYWFR 202
L+RY K SAYWF+
Sbjct: 216 LKRYMKYSAYWFK 178
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 271,604,209
Number of Sequences: 369679
Number of extensions: 3923838
Number of successful extensions: 139733
Number of sequences better than 1.0e-020: 37
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7342388850
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)