TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198841.2.2
(602 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK100267.1|CK100267 C016P12.5pR Populus strain T89 leave... 243 2e-065
gb|BU885878.1|BU885878 R037E02 Populus root cDNA library Po... 243 2e-065
gb|CX178660.1|CX178660 G11_45-62_13.ab1 leaf inoculated wit... 237 6e-062
gb|BU814624.1|BU814624 N031A10 Populus bark cDNA library Po... 234 4e-061
gb|BI070213.1|BI070213 C016P12U Populus strain T89 leaves P... 233 6e-061
gb|BU887486.1|BU887486 R062A10 Populus root cDNA library Po... 225 6e-059
gb|CX170378.1|CX170378 D03_69-102_07.ab1 leaf inoculated wi... 224 8e-059
gb|CX185661.1|CX185661 D05_45-22_07.ab1 leaf inoculated wit... 220 5e-058
gb|CX178524.1|CX178524 E10_45-85_10.ab1 leaf inoculated wit... 218 3e-056
gb|BU897916.1|BU897916 X071H02 Populus wood cDNA library Po... 214 5e-055
gb|CX172787.1|CX172787 G12_69-41_14.ab1 leaf inoculated wit... 198 9e-053
gb|CX181754.1|CX181754 C11_45-76_05.ab1 leaf inoculated wit... 206 1e-052
gb|CK116788.1|CK116788 B017P65 Hybrid aspen plasmid library... 188 7e-051
gb|BU814626.1|BU814626 N031A12 Populus bark cDNA library Po... 166 7e-051
gb|CX183392.1|CX183392 F03_45-49_11.ab1 leaf inoculated wit... 193 6e-049
gb|AJ772578.1|AJ772578 AJ772578 Populus euphratica shoot in... 193 8e-049
gb|AJ772309.1|AJ772309 AJ772309 Populus euphratica shoot in... 190 8e-048
gb|DN498398.1|DN498398 S023D04.5pR Populus imbibed seed cDN... 116 1e-047
gb|BU863062.1|BU863062 S023D04 Populus imbibed seed cDNA li... 116 1e-047
gb|AJ770394.1|AJ770394 AJ770394 Populus euphratica leaf 3-6... 188 3e-047
gb|DT480936.1|DT480936 WS02530.BR_G09 PT-MB-N-A-15 Populus ... 118 5e-045
gb|DT486230.1|DT486230 WS02530.B21_G09 PT-MB-N-A-15 Populus... 118 5e-045
gb|BU862622.1|BU862622 S018A07 Populus imbibed seed cDNA li... 105 4e-044
gb|CX187077.1|CX187077 D02_45-47_08.ab1 leaf inoculated wit... 171 3e-042
gb|BI138277.1|BI138277 F102P58Y Populus flower cDNA library... 96 2e-033
gb|BI139224.1|BI139224 F126P72Y Populus flower cDNA library... 135 2e-031
gb|AJ772705.1|AJ772705 AJ772705 Populus euphratica shoot in... 124 5e-028
gb|CV274944.1|CV274944 WS0174.B21.1_O02 PTxD-NR-A-8 Populus... 117 3e-027
gb|CX174046.1|CX174046 D07_69-64_07.ab1 leaf inoculated wit... 117 3e-027
gb|CV243219.1|CV243219 WS02518.B21_D22 PT-MB-N-A-15 Populus... 116 1e-026
gb|BU881120.1|BU881120 UM58TH09 Populus flower cDNA library... 116 1e-026
gb|DT509696.1|DT509696 WS02424.BR_H04 PTxD-ICC-N-A-14 Popul... 116 1e-026
>gb|CK100267.1|CK100267 C016P12.5pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C016P12 5', mRNA sequence
Length = 669
Score = 243 bits (526), Expect(2) = 2e-065
Identities = 86/121 (71%), Positives = 99/121 (81%)
Frame = +3 / +2
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
+KG+M YGC HYRRRC IRAPCCNE+FDCRHCHNE KN+I +D+ RH++PRHEV+QV+C
Sbjct: 17 DKGLMEYGCLHYRRRCSIRAPCCNEVFDCRHCHNEVKNNINVDQKHRHDMPRHEVKQVIC 196
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHCS 569
SLCGTEQEV+QVCINCGVCMGKYFC CKLFDDD SK+QYHC+ EN FHC
Sbjct: 197 SLCGTEQEVQQVCINCGVCMGKYFCEACKLFDDDTSKKQYHCDGCGICRIGGPENFFHCY 376
Query: 570 K 572
K
Sbjct: 377 K 379
Score = 159 bits (341), Expect = 2e-038
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = -2 / -1
Query: 565 QWKEFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 386
QWK+FS Q*YC L+ SSS SL QKYFPM TPQLI TC TSCSVP +EH
Sbjct: 372 QWKKFSGPPILQIPQPSQ*YCFLDVSSSNSLQASQKYFPMHTPQLIQTC*TSCSVPQSEH 193
Query: 385 TTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSN 206
TC TSWRG SCL S L+ F SL Q RQS SLQQGALM HLL *C HP I P S+
Sbjct: 192 ITCLTSWRGMSCLCF*STLILFFTSL*Q*RQSNTSLQQGALMLHLLR*CRHPYSINPLSS 13
Score = 117 bits (250), Expect = 6e-026
Identities = 56/124 (45%), Positives = 80/124 (64%)
Frame = -1 / -3
Query: 572 F*TVEGILPASDSTYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ 393
F T+E IL +S+S T++ +IL R II+++ A TEVL HA+T +DT L +LLFSAT+
Sbjct: 379 FVTMEEILRSSNSANPTAITMILFLRCIIIKQLASLTEVLSHAHTTVDTNLLNLLFSATK 200
Query: 392 *AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPF 213
AY+L FMAW M + IN + +L I+ ++AIK F+ AR S AA I+ I H F
Sbjct: 199 RAYHLFDFMAWHVMSMLLINIDIVLHLIMTMTAIKYFVTARCSDAAPSPIVQASIFH*SF 20
Query: 212 LKFL 201
+ +L
Sbjct: 19 I*YL 8
Score = 25.8 bits (50), Expect(2) = 2e-065
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / +2
Query: 554 FLPLFKSGCCYSIALK 601
F +K GCCYS LK
Sbjct: 362 FFHCYKCGCCYSNLLK 409
>gb|BU885878.1|BU885878 R037E02 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 595
Score = 243 bits (526), Expect(2) = 2e-065
Identities = 86/121 (71%), Positives = 99/121 (81%)
Frame = +3 / +1
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
+KG+M YGC HYRRRC IRAPCCNE+FDCRHCHNE KN+I +D+ RH++PRHEV+QV+C
Sbjct: 16 DKGLMEYGCLHYRRRCSIRAPCCNEVFDCRHCHNEVKNNINVDQKHRHDMPRHEVKQVIC 195
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHCS 569
SLCGTEQEV+QVCINCGVCMGKYFC CKLFDDD SK+QYHC+ EN FHC
Sbjct: 196 SLCGTEQEVQQVCINCGVCMGKYFCEACKLFDDDTSKKQYHCDGCGICRIGGPENFFHCY 375
Query: 570 K 572
K
Sbjct: 376 K 378
Score = 159 bits (341), Expect = 2e-038
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = -2 / -3
Query: 565 QWKEFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 386
QWK+FS Q*YC L+ SSS SL QKYFPM TPQLI TC TSCSVP +EH
Sbjct: 371 QWKKFSGPPILQIPQPSQ*YCFLDVSSSNSLQASQKYFPMHTPQLIQTC*TSCSVPQSEH 192
Query: 385 TTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSN 206
TC TSWRG SCL S L+ F SL Q RQS SLQQGALM HLL *C HP I P S+
Sbjct: 191 ITCLTSWRGMSCLCF*STLILFFTSL*Q*RQSNTSLQQGALMLHLLR*CRHPYSINPLSS 12
Score = 117 bits (250), Expect = 6e-026
Identities = 56/124 (45%), Positives = 80/124 (64%)
Frame = -1 / -2
Query: 572 F*TVEGILPASDSTYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ 393
F T+E IL +S+S T++ +IL R II+++ A TEVL HA+T +DT L +LLFSAT+
Sbjct: 378 FVTMEEILRSSNSANPTAITMILFLRCIIIKQLASLTEVLSHAHTTVDTNLLNLLFSATK 199
Query: 392 *AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPF 213
AY+L FMAW M + IN + +L I+ ++AIK F+ AR S AA I+ I H F
Sbjct: 198 RAYHLFDFMAWHVMSMLLINIDIVLHLIMTMTAIKYFVTARCSDAAPSPIVQASIFH*SF 19
Query: 212 LKFL 201
+ +L
Sbjct: 18 I*YL 7
Score = 25.8 bits (50), Expect(2) = 2e-065
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2 / +1
Query: 554 FLPLFKSGCCYSIALK 601
F +K GCCYS LK
Sbjct: 361 FFHCYKCGCCYSNLLK 408
>gb|CX178660.1|CX178660 G11_45-62_13.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 634
Score = 237 bits (511), Expect = 6e-062
Identities = 82/111 (73%), Positives = 97/111 (87%)
Frame = +3 / +2
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRCRIRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 287 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 466
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 518
HEV+QV+CSLCGTEQEV+QVCINCGVCMGKYFC CKLFDDD SK+QYHC+
Sbjct: 467 HEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCETCKLFDDDTSKKQYHCD 619
Score = 155 bits (334), Expect = 2e-037
Identities = 70/103 (67%), Positives = 74/103 (71%)
Frame = -2 / -2
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q*YC L+ SSSKSL QKYFPM TPQLI TC TSCSVP +EH TC TSWRG SCL S
Sbjct: 615 Q*YCFLDVSSSKSLQVSQKYFPMHTPQLIQTC*TSCSVPQSEHITCLTSWRGMSCLCF*S 436
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSN 206
L+ F SL Q RQS SLQQGALMRHLL *C HP I P S+
Sbjct: 435 TLILFFASL*Q*RQSNTSLQQGALMRHLLR*CRHPYSINPLSS 307
Score = 107 bits (229), Expect = 5e-023
Identities = 50/108 (46%), Positives = 70/108 (64%)
Frame = -1 / -1
Query: 524 TSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMPL 345
T++ +IL R II++E A TEVL HA+T +DT L +LLFSAT+ AY+L FMAW M +
Sbjct: 625 TAITMILFLRCIIIKELASLTEVLSHAHTTVDTNLLNLLFSATKRAYHLFDFMAWHVMSM 446
Query: 344 HFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFL 201
IN + +L ++ ++AIK FI AR S AA I+ I H F+ +L
Sbjct: 445 LLINIDIVLRLVMTMTAIKYFITARCSDAAPSPIVQASIFH*SFI*YL 302
>gb|BU814624.1|BU814624 N031A10 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 689
Score = 234 bits (505), Expect = 4e-061
Identities = 81/111 (72%), Positives = 96/111 (86%)
Frame = +3 / +2
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRC IRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 338 NVETPQILDKGLMEYGCLHYRRRCSIRAPCCNEVFDCRHCHNEVKNNINVDQKHRHDMPR 517
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 518
HEV+QV+CSLCGTEQEV+QVCINCGVCMGKYFC CKLFDDD SK+QYHC+
Sbjct: 518 HEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCEACKLFDDDTSKKQYHCD 670
Score = 150 bits (323), Expect = 5e-036
Identities = 68/103 (66%), Positives = 72/103 (69%)
Frame = -2 / -3
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q*YC L+ SSS SL QKYFPM TPQLI TC TSCSVP +EH TC TSWRG SCL S
Sbjct: 666 Q*YCFLDVSSSNSLQASQKYFPMHTPQLIQTC*TSCSVPQSEHITCLTSWRGMSCLCF*S 487
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSN 206
L+ F SL Q RQS SLQQGALM HLL *C HP I P S+
Sbjct: 486 TLILFFTSL*Q*RQSNTSLQQGALMLHLLR*CRHPYSINPLSS 358
Score = 106 bits (227), Expect = 1e-022
Identities = 50/112 (44%), Positives = 71/112 (63%)
Frame = -1 / -2
Query: 536 STYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWK 357
S T++ +IL R II+++ A TEVL HA+T +DT L +LLFSAT+ AY+L FMAW
Sbjct: 688 SANPTAITMILFLRCIIIKQLASLTEVLSHAHTTVDTNLLNLLFSATKRAYHLFDFMAWH 509
Query: 356 FMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFL 201
M + IN + +L I+ ++AIK F+ AR S AA I+ I H F+ +L
Sbjct: 508 VMSMLLINIDIVLHLIMTMTAIKYFVTARCSDAAPSPIVQASIFH*SFI*YL 353
>gb|BI070213.1|BI070213 C016P12U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 437
Score = 233 bits (504), Expect = 6e-061
Identities = 80/103 (77%), Positives = 93/103 (90%)
Frame = +3 / +3
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
+KG+M YGC HYRRRC IRAPCCNE+FDCRHCHNE KN+I +D+ RH++PRHEV+QV+C
Sbjct: 12 DKGLMEYGCLHYRRRCSIRAPCCNEVFDCRHCHNEVKNNINVDQKHRHDMPRHEVKQVIC 191
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 518
SLCGTEQEV+QVCINCGVCMGKYFC CKLFDDD SK+QYHC+
Sbjct: 192 SLCGTEQEVQQVCINCGVCMGKYFCEACKLFDDDTSKKQYHCD 320
Score = 150 bits (323), Expect = 5e-036
Identities = 68/103 (66%), Positives = 72/103 (69%)
Frame = -2 / -2
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q*YC L+ SSS SL QKYFPM TPQLI TC TSCSVP +EH TC TSWRG SCL S
Sbjct: 316 Q*YCFLDVSSSNSLQASQKYFPMHTPQLIQTC*TSCSVPQSEHITCLTSWRGMSCLCF*S 137
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSN 206
L+ F SL Q RQS SLQQGALM HLL *C HP I P S+
Sbjct: 136 TLILFFTSL*Q*RQSNTSLQQGALMLHLLR*CRHPYSINPLSS 8
Score = 106 bits (226), Expect = 1e-022
Identities = 50/109 (45%), Positives = 70/109 (64%)
Frame = -1 / -1
Query: 527 STSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ*AYNLLHFMAWKFMP 348
S S+ +IL R II+++ A TEVL HA+T +DT L +LLFSAT+ AY+L FMAW M
Sbjct: 329 SHSITMILFLRCIIIKQLASLTEVLSHAHTTVDTNLLNLLFSATKRAYHLFDFMAWHVMS 150
Query: 347 LHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIVHYPFLKFL 201
+ IN + +L I+ ++AIK F+ AR S AA I+ I H F+ +L
Sbjct: 149 MLLINIDIVLHLIMTMTAIKYFVTARCSDAAPSPIVQASIFH*SFI*YL 3
>gb|BU887486.1|BU887486 R062A10 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 569
Score = 225 bits (485), Expect(2) = 6e-059
Identities = 76/119 (63%), Positives = 97/119 (81%)
Frame = +3 / +2
Query: 216 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSL 395
G ++GC HYRRRC+IRAPCC+EIFDCRHCHNE+KNS++++ + RH++PRHE+++V+CSL
Sbjct: 155 GYGNFGCTHYRRRCKIRAPCCDEIFDCRHCHNESKNSMEVNPIDRHDIPRHELKRVICSL 334
Query: 396 CGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHCSK 572
C TEQEV+Q C +CGVCMGKYFC CK FDDD+SKQQYHCN EN FHC++
Sbjct: 335 CDTEQEVQQQCFHCGVCMGKYFCSKCKFFDDDISKQQYHCNECGICRTGGKENFFHCNR 511
Score = 84.9 bits (179), Expect(2) = 4e-024
Identities = 40/71 (56%), Positives = 42/71 (59%)
Frame = -2 / -3
Query: 565 QWKEFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 386
Q K+FS LQ YCC E SSSK+LH QKYFPM TPQ H C TSCSV H EH
Sbjct: 504 Q*KKFSFPPVLQMPHSLQWYCCFEISSSKNLHLEQKYFPMHTPQ*KHCC*TSCSVSHKEH 325
Query: 385 TTCCTSWRGSS 353
T S RG S
Sbjct: 324 MTLFNS*RGMS 292
Score = 46.0 bits (94), Expect(2) = 4e-024
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -2 / -3
Query: 328 MEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP 230
+EF SL QC QS IS QQGAL+ HLLL* HP
Sbjct: 267 IEFFDSL*QCLQSNISSQQGALILHLLL*WVHP 169
Score = 22.6 bits (43), Expect(2) = 6e-059
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +2
Query: 569 KSGCCYSIALK 601
+ GCCYS LK
Sbjct: 509 RCGCCYSTLLK 541
>gb|CX170378.1|CX170378 D03_69-102_07.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 638
Score = 224 bits (484), Expect(2) = 8e-059
Identities = 76/119 (63%), Positives = 97/119 (81%)
Frame = +3 / +1
Query: 216 GIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVCSL 395
G ++GC HYRRRC+IRAPCC+EIFDCRHCHNE+KNS++++ + RH++PRHE+++V+CSL
Sbjct: 193 GYGNFGCTHYRRRCKIRAPCCDEIFDCRHCHNESKNSMEVNPIDRHDIPRHELKRVICSL 372
Query: 396 CGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHCSK 572
C TEQEV+Q C +CGVCMGKYFC CK FDDD+SKQQYHCN EN FHC++
Sbjct: 373 CDTEQEVQQQCFHCGVCMGKYFCSKCKYFDDDISKQQYHCNECGICRTGGKENFFHCNR 549
Score = 83.5 bits (176), Expect(2) = 1e-023
Identities = 40/71 (56%), Positives = 41/71 (57%)
Frame = -2 / -1
Query: 565 QWKEFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 386
Q K+FS LQ YCC E SSSK LH QKYFPM TPQ H C TSCSV H EH
Sbjct: 542 Q*KKFSFPPVLQMPHSLQWYCCFEISSSKYLHLEQKYFPMHTPQ*KHCC*TSCSVSHKEH 363
Query: 385 TTCCTSWRGSS 353
T S RG S
Sbjct: 362 MTLFNS*RGMS 330
Score = 46.0 bits (94), Expect(2) = 1e-023
Identities = 22/33 (66%), Positives = 24/33 (72%)
Frame = -2 / -1
Query: 328 MEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP 230
+EF SL QC QS IS QQGAL+ HLLL* HP
Sbjct: 305 IEFFDSL*QCLQSNISSQQGALILHLLL*WVHP 207
Score = 22.6 bits (43), Expect(2) = 8e-059
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +1
Query: 569 KSGCCYSIALK 601
+ GCCYS LK
Sbjct: 547 RCGCCYSTLLK 579
>gb|CX185661.1|CX185661 D05_45-22_07.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 665
Score = 220 bits (475), Expect(2) = 5e-058
Identities = 76/121 (62%), Positives = 93/121 (76%)
Frame = +3 / +3
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
E G +YGC HYRRRC+I+APCCNEIFDCRHCHN+ KN ++ + + RH++PRHEV +V+C
Sbjct: 198 EIGSGNYGCSHYRRRCKIKAPCCNEIFDCRHCHNDAKNGLETNPLDRHDIPRHEVTKVIC 377
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHCS 569
SLC TE +V+Q CINCGVCMGKY+C CK FDDDVSK QYHC+ EN FHC+
Sbjct: 378 SLCDTEHDVKQNCINCGVCMGKYYCSKCKFFDDDVSKNQYHCDDCGICRTGGKENFFHCN 557
Query: 570 K 572
K
Sbjct: 558 K 560
Score = 138 bits (295), Expect = 4e-032
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = -2 / -2
Query: 565 QWKEFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 386
QWK+FS Q Y ETSSSK+LH Q YFPMQTPQ + C TSCSV +E
Sbjct: 553 QWKKFSFPPVLHIPQSSQWY*FFETSSSKNLHLEQ*YFPMQTPQFMQFCLTSCSVSQSEQ 374
Query: 385 TTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
T TSWRG SC + FL SL QC QSKISLQQGAL+ HLLL*C HP* P S
Sbjct: 373 ITFVTSWRGISCRSSGLVSNPFLASL*QCLQSKISLQQGALILHLLL*CEHP*FPEPIS 197
Score = 104 bits (222), Expect = 5e-022
Identities = 49/116 (42%), Positives = 71/116 (61%)
Frame = -1 / -1
Query: 572 F*TVEGILPASDSTYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ 393
F +E I +S S YST + ++L+F +II+EE A T V PHAN+ + L +++F T+
Sbjct: 560 FVAMEEIFLSSSSAYSTIITMVLIF*NIIIEELALRTVVFPHANSTVYAILLNIMFGVTE 381
Query: 392 *AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIV 225
* NL FMA M + +++F ILS I+ + AIK+FIA R ASP IM I+
Sbjct: 380 *TNNLCDFMARNIMSIKWVSFQPILSIIMTMPAIKDFIATRCFNLASPPIM*ASII 213
Score = 24.0 bits (46), Expect(2) = 5e-058
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +3
Query: 569 KSGCCYSIALK 601
K GCCYS+ +K
Sbjct: 558 KCGCCYSMLMK 590
>gb|CX178524.1|CX178524 E10_45-85_10.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 702
Score = 218 bits (470), Expect = 3e-056
Identities = 77/121 (63%), Positives = 92/121 (76%)
Frame = +3 / +3
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
E G +YGC HYRRRC+IRAPCCNEIFDCRHCHN+ KN ++ + + RH++PRHEV +V+C
Sbjct: 330 EIGSGNYGCSHYRRRCKIRAPCCNEIFDCRHCHNDAKNGLETNPLDRHDIPRHEVTKVIC 509
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENSFHCS 569
SLC TEQ+V+Q CINCGVCMGKY+C CK FDDDVSK QYHC+ EN FH
Sbjct: 510 SLCDTEQDVKQNCINCGVCMGKYYCSKCKFFDDDVSKNQYHCDECGICRTGGKENFFHWH 689
Query: 570 K 572
K
Sbjct: 690 K 692
Score = 138 bits (295), Expect = 4e-032
Identities = 67/119 (56%), Positives = 73/119 (61%)
Frame = -2 / -3
Query: 565 QWKEFSXXXXXXXXXXLQ*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEH 386
QWK+FS Q Y ETSSSK+LH Q YFPMQTPQ + C TSCSV +E
Sbjct: 685 QWKKFSFPPVLHIPHSSQWY*FFETSSSKNLHLEQ*YFPMQTPQFMQFCLTSCSVSQSEQ 506
Query: 385 TTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
T TSWRG SC + FL SL QC QSKISLQQGAL+ HLLL*C HP* P S
Sbjct: 505 ITFVTSWRGISCRSSGLVSNPFLASL*QCLQSKISLQQGALILHLLL*CEHP*FPEPIS 329
Score = 107 bits (229), Expect = 5e-023
Identities = 51/116 (43%), Positives = 72/116 (62%)
Frame = -1 / -2
Query: 572 F*TVEGILPASDSTYSTSVAVILLFRDIIVEEFAQTTEVLPHANTAIDTYLSHLLFSATQ 393
F +E I +S S YST + ++L+F +II+EE A T V PHAN+ + L ++LF T+
Sbjct: 692 FVPMEEIFLSSSSAYSTLITMVLIF*NIIIEELALRTVVFPHANSTVYAILLNILFGVTE 513
Query: 392 *AYNLLHFMAWKFMPLHFINFNGILSFIVAVSAIKNFIAARSSYAASPSIMWTPIV 225
* NL FMA M + +++F ILS I+ + AIK+FIA R S ASP IM I+
Sbjct: 512 *TNNLCDFMARNIMSIKWVSFQPILSIIMTMPAIKDFIATRCSNLASPPIM*ASII 345
>gb|BU897916.1|BU897916 X071H02 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 710
Score = 214 bits (461), Expect = 5e-055
Identities = 74/102 (72%), Positives = 88/102 (86%)
Frame = +3 / +3
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + ++G+M YGC HYRRRC IRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 402 NVETPQILDEGLMEYGCLHYRRRCSIRAPCCNEVFDCRHCHNEVKNNINVDQKHRHDMPR 581
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDD 491
HEV+QV+CSLCGTEQEV+QVCINCGVCMGKYFC CKLFDDD
Sbjct: 582 HEVKQVICSLCGTEQEVQQVCINCGVCMGKYFCEACKLFDDD 707
Score = 138 bits (295), Expect = 4e-032
Identities = 63/95 (66%), Positives = 66/95 (69%)
Frame = -2 / -2
Query: 490 SSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVS 311
SSS SL QKYFPM TPQLI TC TSCSVP +EH TC TSWRG SCL S L+ F S
Sbjct: 706 SSSNSLQASQKYFPMHTPQLIQTC*TSCSVPQSEHITCLTSWRGMSCLCF*STLILFFTS 527
Query: 310 LWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFSN 206
L Q RQS SLQQGALM HLL *C HP I P S+
Sbjct: 526 L*Q*RQSNTSLQQGALMLHLLR*CRHPYSINPSSS 422
>gb|CX172787.1|CX172787 G12_69-41_14.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 666
Score = 198 bits (426), Expect(2) = 9e-053
Identities = 68/97 (70%), Positives = 82/97 (84%)
Frame = +3 / +3
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
E G +YGC HYRRRC+IRAPCCNEIFDCRHCHN+ KN ++ + + RH++PRHEV +V+C
Sbjct: 306 EIGSGNYGCSHYRRRCKIRAPCCNEIFDCRHCHNDAKNGLETNPLDRHDIPRHEVTKVIC 485
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSK 500
SLC TEQ+V+Q CINCGVCMGKY+C CK FDDDVSK
Sbjct: 486 SLCDTEQDVKQNCINCGVCMGKYYCSKCKFFDDDVSK 596
Score = 127 bits (273), Expect(2) = 1e-030
Identities = 60/96 (62%), Positives = 65/96 (67%)
Frame = -2 / -3
Query: 496 ETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFL 317
ETSSSK+LH Q YFPMQTPQ + C TSCSV +E T TSWRG SC + FL
Sbjct: 592 ETSSSKNLHLEQ*YFPMQTPQFMQFCLTSCSVSQSEQITFVTSWRGISCRSSGLVSNPFL 413
Query: 316 VSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
SL QC QSKISLQQGAL+ HLLL*C HP* P S
Sbjct: 412 ASL*QCLQSKISLQQGALILHLLL*CEHP*FPEPIS 305
Score = 29.0 bits (57), Expect(2) = 9e-053
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3 / +2
Query: 498 KQQYHCNXXXXXXXXXXENSFHCS 569
K QYHC+ EN FHC+
Sbjct: 593 KNQYHCDECGICRTGGKENFFHCN 664
Score = 24.9 bits (48), Expect(2) = 1e-030
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = -3 / -2
Query: 564 SGRNSPCLRFYIFH 523
+GRN P L+F IFH
Sbjct: 659 NGRNFPFLQFCIFH 618
>gb|CX181754.1|CX181754 C11_45-76_05.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 742
Score = 206 bits (444), Expect = 1e-052
Identities = 70/102 (68%), Positives = 84/102 (82%)
Frame = +3 / +3
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
E G +YGC HYRRRC+IRAPCCNEIFDCRHCHN+ KN ++ + + RH++PRHEV +V+C
Sbjct: 435 EIGSGNYGCSHYRRRCKIRAPCCNEIFDCRHCHNDAKNGLETNPLDRHDIPRHEVTKVIC 614
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHC 515
SLC TEQ+V+ C NCGVCMGKY+C CK FDDDVSK QYHC
Sbjct: 615 SLCDTEQDVKANCXNCGVCMGKYYCSKCKFFDDDVSKNQYHC 740
Score = 124 bits (265), Expect = 5e-028
Identities = 61/102 (59%), Positives = 66/102 (64%)
Frame = -2 / -1
Query: 514 Q*YCCLETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILS 335
Q Y ETSSSK+LH Q YFPMQTPQ + TSCSV +E T TSWRG SC
Sbjct: 739 QWY*FFETSSSKNLHLEQ*YFPMQTPQXMQFALTSCSVSQSEQITFVTSWRGISCRSSGL 560
Query: 334 ILMEFLVSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
+ FL SL QC QSKISLQQGAL+ HLLL*C HP* P S
Sbjct: 559 VSNPFLASL*QCLQSKISLQQGALILHLLL*CEHP*FPEPIS 434
>gb|CK116788.1|CK116788 B017P65 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B017P65 5', mRNA sequence
Length = 361
Score = 188 bits (404), Expect(3) = 7e-051
Identities = 65/90 (72%), Positives = 78/90 (86%)
Frame = +3 / +1
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRC IRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 19 NVETPQILDKGLMEYGCLHYRRRCSIRAPCCNEVFDCRHCHNEVKNNINVDQKHRHDMPR 198
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGK 455
HEV+QV+CSLCGTEQEV+QVCINCGVCMGK
Sbjct: 199 HEVKQVICSLCGTEQEVQQVCINCGVCMGK 288
Score = 122 bits (262), Expect = 1e-027
Identities = 55/83 (66%), Positives = 58/83 (69%)
Frame = -2 / -3
Query: 454 FPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQ 275
FPM TPQLI TC TSCSVP +EH TC TSWRG SCL S L+ F SL Q RQS SLQ
Sbjct: 287 FPMHTPQLIQTC*TSCSVPQSEHITCLTSWRGMSCLCF*STLILFFTSL*Q*RQSNTSLQ 108
Query: 274 QGALMRHLLL*CGHP*CIIPFSN 206
QGALM HLL *C HP I P S+
Sbjct: 107 QGALMLHLLR*CRHPYSINPLSS 39
Score = 29.0 bits (57), Expect(3) = 7e-051
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3 / +3
Query: 450 GKYFCGLCKLFDDD 491
GK FC CKL DDD
Sbjct: 282 GKVFCEACKLXDDD 323
Score = 21.2 bits (40), Expect(3) = 7e-051
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = +3 / +2
Query: 495 SKQQYHCN 518
SK+QYHC+
Sbjct: 326 SKKQYHCD 349
>gb|BU814626.1|BU814626 N031A12 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 685
Score = 166 bits (358), Expect(2) = 7e-051
Identities = 59/90 (65%), Positives = 72/90 (80%)
Frame = +3 / +1
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRC IRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 376 NVETPQILDKGLMEYGCLHYRRRCTIRAPCCNEVFDCRHCHNEVKNNINVDQKHRHDMPR 555
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGK 455
HEV+QV+CSLCGTEQEV+QVCI GK
Sbjct: 556 HEVKQVICSLCGTEQEVQQVCIQLRCVHGK 645
Score = 104 bits (221), Expect(2) = 4e-027
Identities = 49/83 (59%), Positives = 53/83 (63%)
Frame = -2 / -3
Query: 454 FPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQ 275
FP I TC TSCSVP +EH TC TSWRG SCL S L+ F SL Q RQS SLQ
Sbjct: 644 FPCTHRS*IQTC*TSCSVPQSEHITCLTSWRGMSCLCF*STLILFFTSL*Q*RQSNTSLQ 465
Query: 274 QGALMRHLLL*CGHP*CIIPFSN 206
QGAL+ HLL *C HP I P S+
Sbjct: 464 QGALIVHLLR*CRHPYSINPLSS 396
Score = 53.8 bits (111), Expect(2) = 7e-051
Identities = 18/20 (90%), Positives = 18/20 (90%)
Frame = +3 / +2
Query: 432 NCGVCMGKYFCGLCKLFDDD 491
NCGVCMGKYFC CKLFDDD
Sbjct: 623 NCGVCMGKYFCEACKLFDDD 682
Score = 36.8 bits (74), Expect(2) = 4e-027
Identities = 15/20 (75%), Positives = 15/20 (75%)
Frame = -2 / -2
Query: 490 SSSKSLHKPQKYFPMQTPQL 431
SSS SL QKYFPM TPQL
Sbjct: 681 SSSNSLQASQKYFPMHTPQL 622
>gb|CX183392.1|CX183392 F03_45-49_11.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 704
Score = 193 bits (417), Expect = 6e-049
Identities = 66/95 (69%), Positives = 80/95 (84%)
Frame = +3 / +1
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
E G +YGC HYRRRC+IRAPCCNEIFDCRHCHN+ KN ++ + + RH++PRHEV +V+C
Sbjct: 418 EIGSGNYGCSHYRRRCKIRAPCCNEIFDCRHCHNDAKNGLETNPLDRHDIPRHEVTKVIC 597
Query: 390 SLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDV 494
SLC TEQ+V+Q CINCGVCMGKY+C CK FDDDV
Sbjct: 598 SLCDTEQDVKQNCINCGVCMGKYYCSKCKFFDDDV 702
Score = 127 bits (273), Expect = 4e-029
Identities = 60/96 (62%), Positives = 65/96 (67%)
Frame = -2 / -1
Query: 496 ETSSSKSLHKPQKYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFL 317
ETSSSK+LH Q YFPMQTPQ + C TSCSV +E T TSWRG SC + FL
Sbjct: 704 ETSSSKNLHLEQ*YFPMQTPQFMQFCLTSCSVSQSEQITFVTSWRGISCRSSGLVSNPFL 525
Query: 316 VSLWQCRQSKISLQQGALMRHLLL*CGHP*CIIPFS 209
SL QC QSKISLQQGAL+ HLLL*C HP* P S
Sbjct: 524 ASL*QCLQSKISLQQGALILHLLL*CEHP*FPEPIS 417
>gb|AJ772578.1|AJ772578 AJ772578 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700008F07F1, mRNA sequence
Length = 549
Score = 193 bits (416), Expect = 8e-049
Identities = 66/91 (72%), Positives = 80/91 (87%)
Frame = +3 / +3
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRCRIRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 273 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 452
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGKY 458
HE++QV+CSLCGTEQEV+QVCINCGVCMGKY
Sbjct: 453 HEIKQVICSLCGTEQEVQQVCINCGVCMGKY 545
Score = 127 bits (272), Expect = 6e-029
Identities = 56/85 (65%), Positives = 60/85 (70%)
Frame = -2 / -3
Query: 460 KYFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKIS 281
+YFPM TPQLI TC TSCSVP +EH TC SWRG SCL S L+ F SL Q RQS S
Sbjct: 547 RYFPMHTPQLIQTC*TSCSVPQSEHITCLISWRGMSCLCF*STLILFFASL*Q*RQSNTS 368
Query: 280 LQQGALMRHLLL*CGHP*CIIPFSN 206
LQQGALMRHLL *C HP I P S+
Sbjct: 367 LQQGALMRHLLR*CRHPYSINPLSS 293
>gb|AJ772309.1|AJ772309 AJ772309 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700004F05F1, mRNA sequence
Length = 540
Score = 190 bits (409), Expect = 8e-048
Identities = 65/90 (72%), Positives = 79/90 (87%)
Frame = +3 / -3
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRCRIRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 271 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 92
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGK 455
HE++QV+CSLCGTEQEV+QVCINCGVCMGK
Sbjct: 91 HEIKQVICSLCGTEQEVQQVCINCGVCMGK 2
Score = 123 bits (263), Expect = 1e-027
Identities = 55/83 (66%), Positives = 58/83 (69%)
Frame = -2 / +3
Query: 454 FPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQ 275
FPM TPQLI TC TSCSVP +EH TC SWRG SCL S L+ F SL Q RQS SLQ
Sbjct: 3 FPMHTPQLIQTC*TSCSVPQSEHITCLISWRGMSCLCF*STLILFFASL*Q*RQSNTSLQ 182
Query: 274 QGALMRHLLL*CGHP*CIIPFSN 206
QGALMRHLL *C HP I P S+
Sbjct: 183 QGALMRHLLR*CRHPYSINPLSS 251
>gb|DN498398.1|DN498398 S023D04.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S023D04 5', mRNA sequence
Length = 787
Score = 116 bits (248), Expect(2) = 1e-047
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +3 / +1
Query: 348 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 527
RHEL R++V+QV+C++C TEQ V QVC NCGV MG+YFC +CK FDDD +K Q+HC+
Sbjct: 247 RHELNRYDVKQVICAVCDTEQPVAQVCTNCGVNMGEYFCEICKFFDDDTAKGQFHCDDCG 426
Query: 528 XXXXXXXENSFHCSK 572
EN FHC K
Sbjct: 427 ICRVGGRENYFHCKK 471
Score = 93.2 bits (197), Expect(2) = 1e-047
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +3 / +1
Query: 183 SNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 332
S P E+ + G M YGC HYRRRC+IRAPCCNEIF CRHCHNE N +K
Sbjct: 85 STPVSNERLDFGKMGYGCQHYRRRCQIRAPCCNEIFACRHCHNEATNMLK 234
>gb|BU863062.1|BU863062 S023D04 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 568
Score = 116 bits (248), Expect(2) = 1e-047
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +3 / +2
Query: 348 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 527
RHEL R++V+QV+C++C TEQ V QVC NCGV MG+YFC +CK FDDD +K Q+HC+
Sbjct: 248 RHELNRYDVKQVICAVCDTEQPVAQVCTNCGVNMGEYFCEICKFFDDDTAKGQFHCDDCG 427
Query: 528 XXXXXXXENSFHCSK 572
EN FHC K
Sbjct: 428 ICRVGGRENYFHCKK 472
Score = 93.2 bits (197), Expect(2) = 1e-047
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +3 / +2
Query: 183 SNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 332
S P E+ + G M YGC HYRRRC+IRAPCCNEIF CRHCHNE N +K
Sbjct: 86 STPVSNERLDFGKMGYGCQHYRRRCQIRAPCCNEIFACRHCHNEATNMLK 235
>gb|AJ770394.1|AJ770394 AJ770394 Populus euphratica leaf 3-6 months, adult Populus
euphratica cDNA clone P0001100011D01F1, mRNA sequence
Length = 450
Score = 188 bits (405), Expect = 3e-047
Identities = 65/90 (72%), Positives = 78/90 (86%)
Frame = +3 / +3
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRCRIRAPCCNE+FDCRHCHNE KN+I D+ RH++PR
Sbjct: 180 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEVKNNINADQKDRHDMPR 359
Query: 366 HEVQQVVCSLCGTEQEVRQVCINCGVCMGK 455
HE++QV+CSLCGTEQEV+QVCINCGVCMGK
Sbjct: 360 HEIKQVICSLCGTEQEVQQVCINCGVCMGK 449
Score = 123 bits (263), Expect = 1e-027
Identities = 55/83 (66%), Positives = 58/83 (69%)
Frame = -2 / -3
Query: 454 FPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISLQ 275
FPM TPQLI TC TSCSVP +EH TC SWRG SCL S L+ F SL Q RQS SLQ
Sbjct: 448 FPMHTPQLIQTC*TSCSVPQSEHITCLISWRGMSCLSF*SALILFFTSL*Q*RQSNTSLQ 269
Query: 274 QGALMRHLLL*CGHP*CIIPFSN 206
QGALMRHLL *C HP I P S+
Sbjct: 268 QGALMRHLLR*CRHPYSINPLSS 200
>gb|DT480936.1|DT480936 WS02530.BR_G09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_G09 5', mRNA sequence
Length = 676
Score = 118 bits (252), Expect(2) = 5e-045
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +3 / +2
Query: 348 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 527
RHE+ R +++QV+CS+C TEQEV QVC CGV MG+YFC +CK +DDD SKQQ+HC+
Sbjct: 182 RHEIVRTDIKQVICSVCNTEQEVAQVCNKCGVKMGEYFCDICKFYDDDTSKQQFHCDSCG 361
Query: 528 XXXXXXXENSFHCSK 572
EN FHC K
Sbjct: 362 ICRLGGRENFFHCEK 406
Score = 82.6 bits (174), Expect(2) = 5e-045
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3 / +2
Query: 228 YGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 341
YGC HYRRRC+IRAPCCN+IF CRHCHNE +S+ K
Sbjct: 65 YGCGHYRRRCKIRAPCCNQIFSCRHCHNEATSSLSNPK 178
>gb|DT486230.1|DT486230 WS02530.B21_G09 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02530_G09 3', mRNA sequence
Length = 675
Score = 118 bits (252), Expect(2) = 5e-045
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = +3 / -2
Query: 348 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXX 527
RHE+ R +++QV+CS+C TEQEV QVC CGV MG+YFC +CK +DDD SKQQ+HC+
Sbjct: 494 RHEIVRTDIKQVICSVCNTEQEVAQVCNKCGVKMGEYFCDICKFYDDDTSKQQFHCDSCG 315
Query: 528 XXXXXXXENSFHCSK 572
EN FHC K
Sbjct: 314 ICRLGGRENFFHCEK 270
Score = 82.6 bits (174), Expect(2) = 5e-045
Identities = 27/38 (71%), Positives = 31/38 (81%)
Frame = +3 / -2
Query: 228 YGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDK 341
YGC HYRRRC+IRAPCCN+IF CRHCHNE +S+ K
Sbjct: 611 YGCGHYRRRCKIRAPCCNQIFSCRHCHNEATSSLSNPK 498
>gb|BU862622.1|BU862622 S018A07 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 446
Score = 105 bits (223), Expect(2) = 4e-044
Identities = 36/57 (63%), Positives = 47/57 (82%)
Frame = +3 / +3
Query: 348 RHELPRHEVQQVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCN 518
RHEL R++V+QV+C++C TEQ V QVC NCGV MG+YFC +CK FDDD +K Q+HC+
Sbjct: 258 RHELNRYDVKQVICAVCDTEQPVAQVCTNCGVNMGEYFCEICKFFDDDTAKGQFHCD 428
Score = 93.2 bits (197), Expect(2) = 4e-044
Identities = 33/50 (66%), Positives = 37/50 (74%)
Frame = +3 / +3
Query: 183 SNPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIK 332
S P E+ + G M YGC HYRRRC+IRAPCCNEIF CRHCHNE N +K
Sbjct: 96 STPVSNERLDFGKMGYGCQHYRRRCQIRAPCCNEIFACRHCHNEATNMLK 245
>gb|CX187077.1|CX187077 D02_45-47_08.ab1 leaf inoculated with Marssonia pathogen of Populus
euramericana Populus x canadensis cDNA, mRNA sequence
Length = 695
Score = 171 bits (368), Expect = 3e-042
Identities = 58/84 (69%), Positives = 72/84 (85%)
Frame = +3 / +3
Query: 210 EKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPRHEVQQVVC 389
E G +YGC HYRRRC+IRAPCCNEIFDCRHCHN+ KN ++ + + RH++PRHEV +V+C
Sbjct: 444 EIGSGNYGCSHYRRRCKIRAPCCNEIFDCRHCHNDAKNGLETNPLDRHDIPRHEVTKVIC 623
Query: 390 SLCGTEQEVRQVCINCGVCMGKYF 461
SLC TEQ+V+Q CINCGVCMGKY+
Sbjct: 624 SLCDTEQDVKQNCINCGVCMGKYY 695
Score = 110 bits (235), Expect = 8e-024
Identities = 51/83 (61%), Positives = 55/83 (66%)
Frame = -2 / -2
Query: 457 YFPMQTPQLIHTCRTSCSVPHNEHTTCCTSWRGSSCLFILSILMEFLVSLWQCRQSKISL 278
YFPMQTPQ + C TSCSV +E T TSWRG SC + FL SL QC QSKISL
Sbjct: 691 YFPMQTPQFMQFCLTSCSVSQSEQITFVTSWRGISCRSSGLVSNPFLASL*QCLQSKISL 512
Query: 277 QQGALMRHLLL*CGHP*CIIPFS 209
QQGAL+ HLLL*C HP* P S
Sbjct: 511 QQGALILHLLL*CEHP*FPEPIS 443
>gb|BI138277.1|BI138277 F102P58Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 353
Score = 95.9 bits (203), Expect(4) = 2e-033
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +3 / +1
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETK 320
N + + +KG+M YGC HYRRRCRIRAPCCNE+FDCRHCHNE K
Sbjct: 64 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAK 198
Score = 58.8 bits (122), Expect(4) = 2e-033
Identities = 19/30 (63%), Positives = 27/30 (90%)
Frame = +3 / +2
Query: 318 KNSIKIDKMKRHELPRHEVQQVVCSLCGTE 407
+N+I +D+ RH++PRHEV+QV+CSLCGTE
Sbjct: 197 RNNINVDQKHRHDMPRHEVKQVICSLCGTE 286
Score = 22.1 bits (42), Expect(4) = 2e-033
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +3 / +3
Query: 408 QEVRQVCINC 437
QEV+QV INC
Sbjct: 288 QEVQQVSINC 317
Score = 18.0 bits (33), Expect(4) = 2e-033
Identities = 5/5 (100%), Positives = 5/5 (100%)
Frame = +3 / +2
Query: 450 GKYFC 464
GKYFC
Sbjct: 332 GKYFC 346
>gb|BI139224.1|BI139224 F126P72Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 213
Score = 135 bits (290), Expect = 2e-031
Identities = 45/68 (66%), Positives = 57/68 (83%)
Frame = +3 / +3
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRCRIRAPCCNE+FDCRHCHNE KN+I +D+ RH++PR
Sbjct: 9 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEAKNNINVDQKHRHDMPR 188
Query: 366 HEVQQVVC 389
HEV+QV+C
Sbjct: 189 HEVKQVIC 212
>gb|AJ772705.1|AJ772705 AJ772705 Populus euphratica shoot in vitro plantlet Israel Populus
euphratica cDNA clone P0001700011F05F1, mRNA sequence
Length = 565
Score = 124 bits (265), Expect = 5e-028
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = +3 / +3
Query: 186 NPDDYEKFEKGIMHYGCPHYRRRCRIRAPCCNEIFDCRHCHNETKNSIKIDKMKRHELPR 365
N + + +KG+M YGC HYRRRCRIRAPCCNE+FDCRHCHNE N+I +D+ RH++PR
Sbjct: 270 NVETPQILDKGLMEYGCLHYRRRCRIRAPCCNEVFDCRHCHNEANNNINVDQKHRHDMPR 449
Query: 366 HEVQQVVCSL 395
E++QV L
Sbjct: 450 REIKQVAMFL 479
>gb|CV274944.1|CV274944 WS0174.B21.1_O02 PTxD-NR-A-8 Populus trichocarpa x Populus
deltoides cDNA clone WS0174_O02 3', mRNA sequence
Length = 940
Score = 117 bits (250), Expect(2) = 3e-027
Identities = 42/65 (64%), Positives = 48/65 (73%)
Frame = +3 / -2
Query: 378 QVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENS 557
QV+CSLC TEQ+V+Q CINCGVCMGKY+C CK FDDDVSK QYHC+ EN
Sbjct: 885 QVICSLCDTEQDVKQNCINCGVCMGKYYCSKCKFFDDDVSKNQYHCDECGICRTGGKENF 706
Query: 558 FHCSK 572
FHC+K
Sbjct: 705 FHCNK 691
Score = 24.0 bits (46), Expect(2) = 3e-027
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / -2
Query: 569 KSGCCYSIALK 601
K GCCYS+ +K
Sbjct: 693 KCGCCYSMLMK 661
>gb|CX174046.1|CX174046 D07_69-64_07.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 575
Score = 117 bits (250), Expect(2) = 3e-027
Identities = 42/65 (64%), Positives = 48/65 (73%)
Frame = +3 / +1
Query: 378 QVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENS 557
QV+CSLC TEQ+V+Q CINCGVCMGKY+C CK FDDDVSK QYHC+ EN
Sbjct: 127 QVICSLCDTEQDVKQNCINCGVCMGKYYCSKCKFFDDDVSKNQYHCDECGICRTGGKENF 306
Query: 558 FHCSK 572
FHC+K
Sbjct: 307 FHCNK 321
Score = 24.0 bits (46), Expect(2) = 3e-027
Identities = 7/11 (63%), Positives = 9/11 (81%)
Frame = +2 / +1
Query: 569 KSGCCYSIALK 601
K GCCYS+ +K
Sbjct: 319 KCGCCYSMLMK 351
>gb|CV243219.1|CV243219 WS02518.B21_D22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02518_D22 3', mRNA sequence
Length = 944
Score = 116 bits (249), Expect(2) = 1e-026
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +3 / +1
Query: 378 QVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENS 557
+V+CSLC TEQEV+Q C +CGVCMGKYFC CK FDDD+SKQQYHCN EN
Sbjct: 253 RVICSLCDTEQEVQQQCFHCGVCMGKYFCSKCKFFDDDISKQQYHCNECGICRTGGKENF 432
Query: 558 FHCSK 572
FHC++
Sbjct: 433 FHCNR 447
Score = 22.6 bits (43), Expect(2) = 1e-026
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +1
Query: 569 KSGCCYSIALK 601
+ GCCYS LK
Sbjct: 445 RCGCCYSTLLK 477
>gb|BU881120.1|BU881120 UM58TH09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 574
Score = 116 bits (249), Expect(2) = 1e-026
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +3 / +1
Query: 378 QVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENS 557
+V+CSLC TEQEV+Q C +CGVCMGKYFC CK FDDD+SKQQYHCN EN
Sbjct: 232 RVICSLCDTEQEVQQQCFHCGVCMGKYFCSKCKFFDDDISKQQYHCNECGICRTGGKENF 411
Query: 558 FHCSK 572
FHC++
Sbjct: 412 FHCNR 426
Score = 22.6 bits (43), Expect(2) = 1e-026
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +1
Query: 569 KSGCCYSIALK 601
+ GCCYS LK
Sbjct: 424 RCGCCYSTLLK 456
>gb|DT509696.1|DT509696 WS02424.BR_H04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_H04 5', mRNA sequence
Length = 464
Score = 116 bits (249), Expect(2) = 1e-026
Identities = 41/65 (63%), Positives = 48/65 (73%)
Frame = +3 / +3
Query: 378 QVVCSLCGTEQEVRQVCINCGVCMGKYFCGLCKLFDDDVSKQQYHCNXXXXXXXXXXENS 557
+V+CSLC TEQEV+Q C +CGVCMGKYFC CK FDDD+SKQQYHCN EN
Sbjct: 105 RVICSLCDTEQEVQQQCFHCGVCMGKYFCSKCKFFDDDISKQQYHCNECGICRTGGKENF 284
Query: 558 FHCSK 572
FHC++
Sbjct: 285 FHCNR 299
Score = 22.6 bits (43), Expect(2) = 1e-026
Identities = 7/11 (63%), Positives = 8/11 (72%)
Frame = +2 / +3
Query: 569 KSGCCYSIALK 601
+ GCCYS LK
Sbjct: 297 RCGCCYSTLLK 329
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 306,610,983
Number of Sequences: 369679
Number of extensions: 4765954
Number of successful extensions: 63027
Number of sequences better than 1.0e-020: 35
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7293439591
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)