TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3198833.2.1
(593 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT523930.1|DT523930 WS02041.C21.1_A13 PTxN-IB-N-A-11 Pop... 282 1e-075
gb|DT511542.1|DT511542 WS02416.B21_L24 PTxD-ICC-N-A-14 Popu... 281 3e-075
gb|CV263308.1|CV263308 WS02020.B21_O22 PTxN-IB-N-A-11 Popul... 279 9e-075
gb|CV131034.1|CV131034 L1P03g08 Populus stem seasonal libra... 277 3e-074
gb|CV254756.1|CV254756 WS02411.B21_B12 PTxD-ICC-N-A-14 Popu... 277 3e-074
gb|CV254776.1|CV254776 WS02411.B21_C10 PTxD-ICC-N-A-14 Popu... 277 3e-074
emb|AJ277547.1|PTR277547 Populus tremula x Populus tremuloi... 277 5e-074
gb|AI166540.1|AI166540 xylem.est.362 Poplar xylem Lambda ZA... 275 1e-073
gb|CV131711.1|CV131711 L3P04g06 Populus stem seasonal libra... 272 1e-072
gb|CN519975.1|CN519975 GQ0108.B3_K09 GQ010 Populus trichoca... 271 2e-072
gb|CA934920.1|CA934920 MTU5TS.P25.G11 Aspen stem cDNA Libra... 270 7e-072
gb|CA928772.1|CA928772 MTU6TR.P6.F05 Aspen root cDNA Librar... 267 5e-071
gb|CA927911.1|CA927911 MTU6TR.P14.D10 Aspen root cDNA Libra... 264 2e-070
emb|AJ292974.1|PTR292974 Populus tremula x Populus tremuloi... 264 5e-070
gb|CA825492.1|CA825492 R59H10 two-month-old roots from clon... 175 2e-069
gb|CA928000.1|CA928000 MTU6TR.P15.E11 Aspen root cDNA Libra... 261 2e-069
gb|CV262571.1|CV262571 WS02019.B21_O21 PTxN-IB-N-A-11 Popul... 261 2e-069
gb|CA929023.1|CA929023 MTU6TR.P9.F05 Aspen root cDNA Librar... 260 4e-069
gb|CV233766.1|CV233766 WS01212.B21_E14 PT-GT-FL-A-3 Populus... 260 4e-069
gb|BU877822.1|BU877822 V039F08 Populus flower cDNA library ... 260 6e-069
gb|CV267349.1|CV267349 WS02031.B21_I05 PTxN-IB-N-A-11 Popul... 259 2e-068
gb|CX174688.1|CX174688 E09_69-90_09.ab1 leaf inoculated wit... 257 4e-068
gb|CA928375.1|CA928375 MTU6TR.P1.H08 Aspen root cDNA Librar... 257 5e-068
gb|CA928878.1|CA928878 MTU6TR.P7.H11 Aspen root cDNA Librar... 257 5e-068
gb|BP930503.1|BP930503 BP930503 full-length enriched poplar... 256 1e-067
emb|AJ292975.1|PTR292975 Populus tremula x Populus tremuloi... 254 3e-067
emb|AJ292976.1|PTR292976 Populus tremula x Populus tremuloi... 254 3e-067
gb|CK096353.1|CK096353 UB11CPF02.3pR Populus active cambium... 254 4e-067
gb|CV231563.1|CV231563 WS0194.B21_O16 PT-DX-N-A-10 Populus ... 250 5e-066
gb|DT522062.1|DT522062 WS02035.B21_P06 PTxN-IB-N-A-11 Popul... 250 5e-066
gb|CA928533.1|CA928533 MTU6TR.P3.G08 Aspen root cDNA Librar... 250 6e-066
gb|CV231440.1|CV231440 WS0194.B21_I22 PT-DX-N-A-10 Populus ... 250 6e-066
gb|DT526697.1|DT526697 WS02048.C21_L16 PTxN-IB-N-A-11 Popul... 250 6e-066
gb|CK096229.1|CK096229 UA52DPF03.3pR Populus dormant cambiu... 248 2e-065
gb|CK319620.1|CK319620 B9SP05f02 Populus stem seasonal libr... 247 4e-065
gb|DN493683.1|DN493683 G105P21.5pR Populus tension wood cDN... 244 3e-064
gb|CV131751.1|CV131751 L3P05h06 Populus stem seasonal libra... 243 7e-064
gb|CV131876.1|CV131876 L4P01g01 Populus stem seasonal libra... 239 1e-062
gb|DN497639.1|DN497639 R020H03.5pR Populus root cDNA librar... 222 6e-062
gb|CV273451.1|CV273451 WS01711.B21_A16 PTxD-NR-A-8 Populus ... 195 1e-061
gb|BI130406.1|BI130406 G105P21Y Populus cambium cDNA librar... 235 2e-061
gb|CV268088.1|CV268088 WS0204.B21_I11 PTxN-IB-N-A-11 Populu... 232 2e-060
gb|DT521175.1|DT521175 WS02033.B21_J12 PTxN-IB-N-A-11 Popul... 232 2e-060
gb|DT482440.1|DT482440 WS02519.B21_N06 PT-MB-N-A-15 Populus... 230 5e-060
gb|DT500705.1|DT500705 PX0019.BR.1_L15 PT-X-FL-A-1 Populus ... 229 1e-059
gb|DT500757.1|DT500757 PX0019.BR_B10 PT-X-FL-A-1 Populus tr... 229 1e-059
gb|DT500764.1|DT500764 PX0019.BR_B18 PT-X-FL-A-1 Populus tr... 229 1e-059
gb|DN487860.1|DN487860 R010A03.3pR Populus root cDNA librar... 150 2e-059
gb|CA928697.1|CA928697 MTU6TR.P5.G05 Aspen root cDNA Librar... 227 5e-059
gb|CV280481.1|CV280481 WS0136.B21_H05 PTxD-IL-FL-A-4 Populu... 144 2e-058
gb|AJ774394.1|AJ774394 AJ774394 Populus euphratica shoot 3-... 224 3e-058
gb|BI129226.1|BI129226 G087P63Y Populus cambium cDNA librar... 224 5e-058
gb|DV466001.1|DV466001 MTUNUL1.P46.A08 NUL Populus fremonti... 163 6e-058
gb|DT526222.1|DT526222 WS02047.C21_H05 PTxN-IB-N-A-11 Popul... 163 1e-057
gb|CV257661.1|CV257661 WS0247.B21_E19 PTxD-ICC-N-A-14 Popul... 222 2e-057
gb|DN486788.1|DN486788 P062D05.3pR Populus petioles cDNA li... 221 2e-057
gb|CX168298.1|CX168298 G11_69-44_13.ab1 leaf inoculated wit... 219 2e-056
gb|CV234625.1|CV234625 WS01215.B21.1_J20 PT-GT-FL-A-3 Popul... 217 5e-056
gb|CV255480.1|CV255480 WS02414.B21_C05 PTxD-ICC-N-A-14 Popu... 215 1e-055
gb|DT526077.1|DT526077 WS02047.C21_A24 PTxN-IB-N-A-11 Popul... 215 3e-055
gb|BU811335.1|BU811335 UL83TA06 Populus leaf cDNA library P... 214 4e-055
gb|CK090574.1|CK090574 F013P92.3pR Populus flower cDNA libr... 214 5e-055
gb|CA933091.1|CA933091 MTU5CS.P3.D04 Aspen stem cDNA Librar... 212 1e-054
gb|CN523923.1|CN523923 GQ015M11.T3_H10 GQ015 Populus tricho... 212 2e-054
gb|CV266372.1|CV266372 WS02029.B21_N12 PTxN-IB-N-A-11 Popul... 211 3e-054
gb|CA934122.1|CA934122 MTU3TS.P3.B11 Aspen stem cDNA Librar... 102 9e-054
gb|CA933056.1|CA933056 MTU5CS.P2.H07 Aspen stem cDNA Librar... 207 4e-053
gb|CF120026.1|CF120026 MTU10CS.P9.D02 Aspen stem cDNA Libra... 207 4e-053
gb|BU875935.1|BU875935 V013D01 Populus flower cDNA library ... 207 6e-053
gb|CK093084.1|CK093084 G107P05.3pR Populus tension wood cDN... 204 3e-052
gb|CV252286.1|CV252286 PX0011.B21_D02 PT-X-FL-A-1 Populus t... 204 3e-052
gb|DV466421.1|DV466421 MTUNUL1.P50.D09 NUL Populus fremonti... 142 3e-052
gb|BU877284.1|BU877284 V032C01 Populus flower cDNA library ... 200 7e-051
gb|CV252816.1|CV252816 PX0019.B21.1_B10 PT-X-FL-A-1 Populus... 200 7e-051
gb|DT513104.1|DT513104 WS02421.B21_C07 PTxD-ICC-N-A-14 Popu... 102 2e-050
gb|BU877916.1|BU877916 V040H04 Populus flower cDNA library ... 196 9e-050
gb|CV229766.1|CV229766 WS01914.B21_F17 PT-DX-N-A-10 Populus... 195 2e-049
gb|CA933316.1|CA933316 MTU5CS.P6.D08 Aspen stem cDNA Librar... 194 4e-049
gb|CV232165.1|CV232165 WS0196.B21_M03 PT-DX-N-A-10 Populus ... 194 4e-049
gb|CV230296.1|CV230296 WS01916.B21_A22 PT-DX-N-A-10 Populus... 193 6e-049
gb|CV264358.1|CV264358 WS02024.B21_F01 PTxN-IB-N-A-11 Popul... 88 1e-048
gb|DT524640.1|DT524640 WS02043.C21_D08 PTxN-IB-N-A-11 Popul... 88 1e-048
gb|CV269917.1|CV269917 WS0209.B21_J10 PTxN-IB-N-A-11 Populu... 191 4e-048
gb|DV465799.1|DV465799 MTUNUL1.P43.C11 NUL Populus fremonti... 191 4e-048
gb|CV252262.1|CV252262 PX0011.B21_B20 PT-X-FL-A-1 Populus t... 189 1e-047
gb|CV254278.1|CV254278 WS0224.B21_K11 PTxD-ICC-A-12 Populus... 188 4e-047
gb|DN491681.1|DN491681 V013D01.3pR Populus male catkins cDN... 187 5e-047
gb|CX169759.1|CX169759 A09_69-92_01.ab1 leaf inoculated wit... 186 9e-047
gb|CV252823.1|CV252823 PX0019.B21.1_B18 PT-X-FL-A-1 Populus... 185 2e-046
gb|BU816835.1|BU816835 N071H10 Populus bark cDNA library Po... 184 3e-046
gb|CN519704.1|CN519704 GQ0104.B3_L04 GQ010 Populus trichoca... 183 6e-046
gb|CV252979.1|CV252979 PX0019.B21.1_L15 PT-X-FL-A-1 Populus... 183 9e-046
gb|CV260077.1|CV260077 WS02013.B21_B11 PTxN-IB-N-A-11 Popul... 182 2e-045
gb|CV270349.1|CV270349 WS0151.B21_M05 PTxN-IB-A-6 Populus t... 102 5e-045
gb|CA932275.1|CA932275 MTU5CS.P10.H06 Aspen stem cDNA Libra... 180 8e-045
gb|CA933070.1|CA933070 MTU5CS.P3.B01 Aspen stem cDNA Librar... 180 8e-045
gb|CA933340.1|CA933340 MTU5CS.P6.F09 Aspen stem cDNA Librar... 180 8e-045
gb|CF119964.1|CF119964 MTU10CS.P8.E12 Aspen stem cDNA Libra... 180 8e-045
gb|CV266280.1|CV266280 WS02029.B21_J10 PTxN-IB-N-A-11 Popul... 179 1e-044
gb|CV252214.1|CV252214 WS0119.B21_O24 PT-P-FL-A-2 Populus t... 178 2e-044
gb|CA933465.1|CA933465 MTU5CS.P8.D10 Aspen stem cDNA Librar... 177 5e-044
gb|CF119682.1|CF119682 MTU10CS.P5.A06 Aspen stem cDNA Libra... 177 7e-044
gb|CA932216.1|CA932216 MTU5CS.P10.B03 Aspen stem cDNA Libra... 176 1e-043
gb|CA932919.1|CA932919 MTU5CS.P1.B08 Aspen stem cDNA Librar... 176 1e-043
gb|CK097085.1|CK097085 UB38BPD12.3pR Populus active cambium... 106 4e-043
gb|CA933432.1|CA933432 MTU5CS.P8.A02 Aspen stem cDNA Librar... 164 6e-043
gb|CV267787.1|CV267787 WS02032.B21_L03 PTxN-IB-N-A-11 Popul... 99 5e-042
gb|CX658506.1|CX658506 PO01035H03 Poplar SC cDNA library Po... 105 6e-042
gb|BU816253.1|BU816253 N062D06 Populus bark cDNA library Po... 122 2e-041
gb|CK106906.1|CK106906 UB38BPD12.5pR Populus active cambium... 106 7e-041
gb|BU809100.1|BU809100 UL53F12 Populus leaf cDNA library Po... 103 1e-040
gb|BU821721.1|BU821721 UB27CPA05 Populus tremula cambium cD... 90 9e-040
gb|CN517534.1|CN517534 GQ0093.B3_G06 GQ009 Populus trichoca... 161 4e-039
gb|CA932549.1|CA932549 MTU5CS.P14.E01 Aspen stem cDNA Libra... 134 8e-039
gb|CK320792.1|CK320792 X9SP04e03 Populus stem seasonal libr... 153 1e-038
gb|CX187111.1|CX187111 A07_45-22_01.ab1 leaf inoculated wit... 158 2e-038
gb|CA932884.1|CA932884 MTU5CS.P18.G04 Aspen stem cDNA Libra... 155 2e-037
gb|BP930610.1|BP930610 BP930610 full-length enriched poplar... 154 6e-037
gb|BU822494.1|BU822494 UB38BPD12 Populus tremula cambium cD... 90 2e-036
gb|BU894956.1|BU894956 X017C10 Populus wood cDNA library Po... 150 5e-036
gb|CA934287.1|CA934287 MTU3TS.P5.F09 Aspen stem cDNA Librar... 129 6e-036
gb|CV273245.1|CV273245 WS01710.B21_C19 PTxD-NR-A-8 Populus ... 149 2e-035
gb|CK100525.1|CK100525 C041P79.5pR Populus strain T89 leave... 147 7e-035
gb|CF120024.1|CF120024 MTU10CS.P9.C12 Aspen stem cDNA Libra... 145 2e-034
gb|CA933964.1|CA933964 MTU3TS.P1.A05 Aspen stem cDNA Librar... 144 6e-034
gb|BI129902.1|BI129902 G097P16Y Populus cambium cDNA librar... 143 1e-033
gb|BU868439.1|BU868439 M115G12 Populus flower cDNA library ... 142 2e-033
gb|BP935821.1|BP935821 BP935821 full-length enriched poplar... 138 2e-032
gb|CV235126.1|CV235126 WS01217.B21_N11 PT-GT-FL-A-3 Populus... 105 3e-032
gb|BU820593.1|BU820593 UB11CPH04 Populus tremula cambium cD... 138 3e-032
gb|DT500518.1|DT500518 PX0015.BR_L09 PT-X-FL-A-1 Populus tr... 137 5e-032
gb|BP933078.1|BP933078 BP933078 full-length enriched poplar... 134 5e-031
gb|BP931431.1|BP931431 BP931431 full-length enriched poplar... 133 7e-031
gb|BU821433.1|BU821433 UB23CPA12 Populus tremula cambium cD... 130 6e-030
gb|CK115205.1|CK115205 Y004F11 Populus infected leaf substr... 77 8e-030
gb|BP930403.1|BP930403 BP930403 full-length enriched poplar... 130 9e-030
gb|CK106619.1|CK106619 UB27CPA05.5pR Populus active cambium... 67 1e-029
gb|CV231959.1|CV231959 WS0196.B21_B04 PT-DX-N-A-10 Populus ... 128 3e-029
gb|CV270405.1|CV270405 WS0151.B21_O13 PTxN-IB-A-6 Populus t... 127 4e-029
gb|CV252708.1|CV252708 PX0015.B21_L09 PT-X-FL-A-1 Populus t... 126 2e-028
gb|CX184427.1|CX184427 C01_45-22_05.ab1 leaf inoculated wit... 125 3e-028
gb|CF233090.1|CF233090 PtaJXO0019C11C1105 Poplar cDNA libra... 88 3e-028
gb|DT515289.1|DT515289 WS02427.B21_C16 PTxD-ICC-N-A-14 Popu... 123 7e-028
gb|CX659664.1|CX659664 PO01033E02 Poplar SC cDNA library Po... 122 1e-027
gb|CV233368.1|CV233368 WS01210.B21_C22 PT-GT-FL-A-3 Populus... 120 7e-027
gb|CV258747.1|CV258747 WS0201.B21_G12 PTxN-IB-N-A-11 Populu... 95 8e-027
gb|BU815154.1|BU815154 N037H04 Populus bark cDNA library Po... 119 2e-026
gb|CV273630.1|CV273630 WS01711.B21_K14 PTxD-NR-A-8 Populus ... 119 2e-026
gb|CK091865.1|CK091865 F131P05.3pR Populus flower cDNA libr... 86 2e-026
gb|CN549333.1|CN549333 GQ0241.B3_K21 GQ024 Populus trichoca... 116 9e-026
gb|CK100357.1|CK100357 C025P31.5pR Populus strain T89 leave... 95 2e-025
gb|CA926674.1|CA926674 MTU6CR.P17.H01 Aspen root cDNA Libra... 113 8e-025
gb|DN485091.1|DN485091 M104G07.3pR Populus female catkins c... 112 2e-024
gb|BU867949.1|BU867949 M106C12 Populus flower cDNA library ... 111 5e-024
gb|CV266401.1|CV266401 WS02029.B21_O18 PTxN-IB-N-A-11 Popul... 111 5e-024
gb|BP932384.1|BP932384 BP932384 full-length enriched poplar... 111 5e-024
gb|AI166497.1|AI166497 xylem.est.323 Poplar xylem Lambda ZA... 110 1e-023
gb|BP930069.1|BP930069 BP930069 full-length enriched poplar... 109 1e-023
gb|CA824648.1|CA824648 R46B01 two-month-old roots from clon... 101 4e-023
gb|DT526420.1|DT526420 WS02047.C21_P21 PTxN-IB-N-A-11 Popul... 107 5e-023
gb|BP931564.1|BP931564 BP931564 full-length enriched poplar... 106 9e-023
gb|CF216257.1|CF216257 PT1076 Hybrid aspen xylem up-regulat... 98 3e-022
gb|CK089666.1|CK089666 C025P31.3pR Populus strain T89 leave... 103 9e-022
gb|DT508496.1|DT508496 WS02421.BR_C07 PTxD-ICC-N-A-14 Popul... 102 2e-021
gb|CK090025.1|CK090025 C056P67.3pR Populus strain T89 leave... 102 2e-021
gb|DN487963.1|DN487963 R020H03.3pR Populus root cDNA librar... 99 3e-021
gb|CV279071.1|CV279071 WS0148.B21_E19 PTxD-IL-A-5 Populus t... 101 4e-021
gb|CX168619.1|CX168619 H11_69-122_15.ab1 leaf inoculated wi... 100 6e-021
gb|DT526236.1|DT526236 WS02047.C21_H19 PTxN-IB-N-A-11 Popul... 100 6e-021
gb|AY129243.1| Populus x canescens putative pectin methyles... 100 8e-021
>gb|DT523930.1|DT523930 WS02041.C21.1_A13 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02041_A13 3', mRNA sequence
Length = 947
Score = 282 bits (610), Expect = 1e-075
Identities = 113/185 (61%), Positives = 136/185 (73%)
Frame = +1 / -3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLYVH+ RQFF NC I+GT+DFIFGN
Sbjct: 846 FENTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYVHSNRQFFINCFIAGTVDFIFGN 667
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 666 AAAVFQDCDIHARRPDSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 487
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGTS RVTW
Sbjct: 486 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGTFALSTLFYAEYQNSGSGAGTSSRVTWE 307
Query: 547 GFHVI 561
G+ VI
Sbjct: 306 GYKVI 292
Score = 158 bits (340), Expect = 2e-038
Identities = 89/185 (48%), Positives = 95/185 (51%)
Frame = -1 / +2
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P VTLL VPAP P YSA* +VL K P P+G + S M MMT E SF
Sbjct: 293 ITLYPSHVTLLEVPAPDPEF*YSA*NNVLSAKVPLHSCHPAGCITSVMDDCMMTVLEYSF 472
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
QG PRY G L +G F +T P F LGSV P AVT F W GRR M Q W
Sbjct: 473 QGLPRYVGKLL*TGSKSEVAPILLF*ITMPVF*LGSVLPWAVTMFFWPESGRRAWMSQSW 652
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAP 21
TAA LPKMKS VP M Q KN R T VSW AS *N AWCL P
Sbjct: 653 KTAAALPKMKSTVPAMKQFMKN*RFEWT*RVSW*ASMSHS*NAERSDPTLSATAWCLEGP 832
Query: 20 AVLWK 6
AV K
Sbjct: 833 AVFSK 847
>gb|DT511542.1|DT511542 WS02416.B21_L24 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02416_L24 3', mRNA sequence
Length = 953
Score = 281 bits (608), Expect = 3e-075
Identities = 112/185 (60%), Positives = 136/185 (73%)
Frame = +1 / -3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLY H+ RQFF NC+I+GT+DFIFGN
Sbjct: 852 FENTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYAHSNRQFFINCLIAGTVDFIFGN 673
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 672 AAAVFQDCDIHARRPDSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 493
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGTS RVTW
Sbjct: 492 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGTFALSTLFYAEYQNSGSGAGTSSRVTWE 313
Query: 547 GFHVI 561
G+ VI
Sbjct: 312 GYKVI 298
Score = 154 bits (331), Expect = 4e-037
Identities = 87/185 (47%), Positives = 94/185 (50%)
Frame = -1 / +2
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P VTLL VPAP P YSA* +VL K P P+G + S M MMT E SF
Sbjct: 299 ITLYPSHVTLLEVPAPDPEF*YSA*NNVLSAKVPLHSCHPAGCITSVMDDCMMTVLEYSF 478
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
QG PRY G L +G F +T P F LGSV P AVT F W GRR M Q W
Sbjct: 479 QGLPRYVGKLL*TGSKSEVAPILLF*ITMPVF*LGSVLPWAVTMFFWPESGRRAWMSQSW 658
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAP 21
TAA LPKMKS VP + Q KN R VSW AS *N AWCL P
Sbjct: 659 KTAAALPKMKSTVPAIKQFMKN*RFEWA*RVSW*ASMSHS*NAERSDPTLSATAWCLEGP 838
Query: 20 AVLWK 6
AV K
Sbjct: 839 AVFSK 853
>gb|CV263308.1|CV263308 WS02020.B21_O22 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02020_O22 3', mRNA sequence
Length = 846
Score = 279 bits (604), Expect = 9e-075
Identities = 109/183 (59%), Positives = 132/183 (72%)
Frame = +1 / -3
Query: 13 NTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSA 192
NTAG E+HQAVALRV D + CR DA+QDTLY H RQF+R+C I GTIDFIFGN A
Sbjct: 736 NTAGPEKHQAVALRVSADQSVINRCRIDAYQDTLYTHNYRQFYRDCFIIGTIDFIFGNGA 557
Query: 193 AVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLG 372
V QNC I++R+PM NQ+N VTA GR DPN +G+ IQNC +V L ++ K P+YLG
Sbjct: 556 VVLQNCHIISRKPMANQKNMVTAQGRIDPNQNTGISIQNCDIVASSDLESEQNKFPTYLG 377
Query: 373 RPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGF 552
RPWKE+SR V+M+S I I P G+ W+ +F + TLYY EY NRG GAG SKRV WPG+
Sbjct: 376 RPWKEYSRTVVMQSNIGGHIDPTGWAEWDKEFALTTLYYGEYANRGLGAGVSKRVNWPGY 197
Query: 553 HVI 561
HVI
Sbjct: 196 HVI 188
Score = 137 bits (293), Expect(2) = 1e-033
Identities = 74/159 (46%), Positives = 85/159 (53%)
Frame = -1 / +3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
MT PGQ TLLL PAP P YS * +V+ S P G + ++ + T E SF
Sbjct: 189 MT*YPGQFTLLLTPAPSPLFAYSP*YNVVNANSLSHSAQPVGSICPPILDCITTVLEYSF 368
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
G PRY G L S T QFW+ P F LGS+ PCAVT F W ++G M QFW
Sbjct: 369 HGLPRYVGNLFCSDSRSELATMSQFWIEIPVF*LGSILPCAVTMFFWFAIGFLEIMWQFW 548
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQ 84
+T A LPKMKSMVP M Q N C VSW AS RQ
Sbjct: 549 STTAPLPKMKSMVPIMKQSL*NCL*LCV*RVSWYASMRQ 665
Score = 25.8 bits (50), Expect(2) = 1e-033
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1 / +3
Query: 38 WCLSAPAVLW 9
WC S PAV W
Sbjct: 711 WCFSGPAVFW 740
>gb|CV131034.1|CV131034 L1P03g08 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 801
Score = 277 bits (600), Expect = 3e-074
Identities = 111/185 (60%), Positives = 135/185 (72%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLY H+ RQFF NC+I+GT+DFIFGN
Sbjct: 200 FQNTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYAHSNRQFFINCLIAGTVDFIFGN 379
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP +N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 380 AAAVFQDCDIHARRPDSG*KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 559
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGTS RVTW
Sbjct: 560 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGAGAGTSNRVTWE 739
Query: 547 GFHVI 561
G+ VI
Sbjct: 740 GYKVI 754
Score = 156 bits (335), Expect = 1e-037
Identities = 88/185 (47%), Positives = 94/185 (50%)
Frame = -1 / -1
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P VTLL VPAP P YSA* +VL K P P+G + S M MMT E SF
Sbjct: 753 ITLYPSHVTLLEVPAPAPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSF 574
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
QG PRY G L +G F MT P F LGSV P AVT F GRR M Q W
Sbjct: 573 QGLPRYVGKLL*TGSKSEVAPILLF*MTMPVF*LGSVLPWAVTMFF*PESGRRAWMSQSW 394
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAP 21
TAA LPKMKS VP + Q KN R VSW AS *N AWCL P
Sbjct: 393 KTAAALPKMKSTVPAIKQFMKN*RFEWA*RVSW*ASMSHS*NAERSDPTLSATAWCLEGP 214
Query: 20 AVLWK 6
AV WK
Sbjct: 213 AVFWK 199
>gb|CV254756.1|CV254756 WS02411.B21_B12 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_B12 3', mRNA sequence
Length = 914
Score = 277 bits (600), Expect = 3e-074
Identities = 106/185 (57%), Positives = 133/185 (71%)
Frame = +1 / -2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG E+HQAVALR+ D + CR DA+QDTLY H+ RQF+R+ I+GT+DFIFGN
Sbjct: 853 FQNTAGPEKHQAVALRIGADQSVINRCRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFGN 674
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A V QNC +V R+PM Q+N VTA GRTDPN +G IQ C ++ L P + S+
Sbjct: 673 AAVVLQNCKLVPRKPMSGQKNMVTAQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSF 494
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR V+M+S I D I P G+ W+G+F +KTLYY EY N+G GAGTSKRV W
Sbjct: 493 LGRPWKEYSRTVVMQSNIGDLIDPAGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVKWS 314
Query: 547 GFHVI 561
G+HVI
Sbjct: 313 GYHVI 299
>gb|CV254776.1|CV254776 WS02411.B21_C10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02411_C10 3', mRNA sequence
Length = 871
Score = 277 bits (600), Expect = 3e-074
Identities = 106/185 (57%), Positives = 133/185 (71%)
Frame = +1 / -1
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG E+HQAVALR+ D + CR DA+QDTLY H+ RQF+R+ I+GT+DFIFGN
Sbjct: 847 FQNTAGPEKHQAVALRIGADQSVINRCRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFGN 668
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A V QNC +V R+PM Q+N VTA GRTDPN +G IQ C ++ L P + S+
Sbjct: 667 AAVVLQNCKLVPRKPMSGQKNMVTAQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSF 488
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR V+M+S I D I P G+ W+G+F +KTLYY EY N+G GAGTSKRV W
Sbjct: 487 LGRPWKEYSRTVVMQSNIGDLIDPAGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVKWS 308
Query: 547 GFHVI 561
G+HVI
Sbjct: 307 GYHVI 293
>emb|AJ277547.1|PTR277547 Populus tremula x Populus tremuloides mRNA for putative pectin
methylesterase (pme1 gene)
Length = 2149
Score = 277 bits (599), Expect = 5e-074
Identities = 110/185 (59%), Positives = 134/185 (72%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLYVH+ RQFF NC ++GT+DFIFGN
Sbjct: 1112 FENTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYVHSNRQFFINCFVAGTVDFIFGN 1291
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 1292 AAAVFQDCDYHARRPDSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 1471
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGTS RV W
Sbjct: 1472 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGAGAGTSSRVKWE 1651
Query: 547 GFHVI 561
G+ VI
Sbjct: 1652 GYKVI 1666
Score = 148 bits (317), Expect = 4e-035
Identities = 85/185 (45%), Positives = 92/185 (49%)
Frame = -1 / -2
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P +TLL VPAP P YSA* +VL K P P+G + S M MMT E SF
Sbjct: 1665 ITLYPSHLTLLEVPAPAPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSF 1486
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
G PRY G L +G F +T P F LGSV P AVT F W GRR Q W
Sbjct: 1485 HGLPRYVGKLL*TGSKSEVAPILLF*ITMPVF*LGSVLPWAVTMFFWPESGRRAW*SQSW 1306
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAP 21
TAA LPKMKS VP Q KN R T VSW AS *N AWCL P
Sbjct: 1305 KTAAALPKMKSTVPATKQFMKN*RFEWT*RVSW*ASMSHS*NAERSDPTLNATAWCLEGP 1126
Query: 20 AVLWK 6
AV K
Sbjct: 1125 AVFSK 1111
>gb|AI166540.1|AI166540 xylem.est.362 Poplar xylem Lambda ZAPII library Populus trichocarpa
cDNA 5', mRNA sequence
Length = 576
Score = 275 bits (596), Expect = 1e-073
Identities = 110/182 (60%), Positives = 133/182 (73%)
Frame = +1 / +3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLY H+ RQFF NC+I+GT+DFIFGN
Sbjct: 30 FENTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYAHSNRQFFINCLIAGTVDFIFGN 209
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 210 AAAVFQDCDIHARRPDSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 389
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL YAEY N G GAGTS RVTW
Sbjct: 390 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGTFALSTLXYAEYXNSGSGAGTSSRVTWE 569
Query: 547 GF 552
G+
Sbjct: 570 GY 575
Score = 153 bits (328), Expect = 1e-036
Identities = 86/181 (47%), Positives = 92/181 (50%)
Frame = -1 / -3
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
P VTLL VPAP P YSA* +VL K P P+G + S M MMT E SFQG P
Sbjct: 571 PSHVTLLEVPAPDPEX*YSA*XNVLSAKVPLHSCHPAGCITSVMDDCMMTVLEYSFQGLP 392
Query: 368 RYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAA 189
RY G L +G F +T P F LGSV P AVT F W GRR M Q W TAA
Sbjct: 391 RYVGKLL*TGSKSEVAPILLF*ITMPVF*LGSVLPWAVTMFFWPESGRRAWMSQSWKTAA 212
Query: 188 ELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLW 9
LPKMKS VP + Q KN R VSW AS *N AWCL PAV
Sbjct: 211 ALPKMKSTVPAIKQFMKN*RFEWA*RVSW*ASMSHS*NAERSDPTLSATAWCLEGPAVFS 32
Query: 8 K 6
K
Sbjct: 31 K 29
>gb|CV131711.1|CV131711 L3P04g06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 616
Score = 272 bits (589), Expect = 1e-072
Identities = 105/183 (57%), Positives = 131/183 (71%)
Frame = +1 / +3
Query: 13 NTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSA 192
NTAG +HQAVALRV D + CR DA+QDTLY H+ RQF+R+ I+GT+DFIFGN+A
Sbjct: 48 NTAGPAKHQAVALRVGADQSVINRCRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFGNAA 227
Query: 193 AVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLG 372
V QNC +V R+PM Q+N VTA GRTDPN +G IQ C ++ L P + S+LG
Sbjct: 228 VVLQNCKLVPRKPMSGQKNMVTAQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLG 407
Query: 373 RPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGF 552
RPWKE+SR V+M+S I D I P G+ W+G+F +KTLYY EY N+G GAGTSKRV W G+
Sbjct: 408 RPWKEYSRTVVMQSNIGDLIDPAGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVKWSGY 587
Query: 553 HVI 561
HVI
Sbjct: 588 HVI 596
>gb|CN519975.1|CN519975 GQ0108.B3_K09 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_K09 5', mRNA sequence
Length = 737
Score = 271 bits (587), Expect = 2e-072
Identities = 105/185 (56%), Positives = 132/185 (71%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG E+HQAVALR+ D + CR DA+QDTLY H+ RQF+R+ I+GT+DFIFGN
Sbjct: 125 FQNTAGPEKHQAVALRIGADQSVINRCRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFGN 304
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A V QNC +V R+PM Q+N VTA GRTDPN +G IQ C ++ L P + S+
Sbjct: 305 AAVVLQNCKLVPRKPMSGQKNMVTAQGRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSF 484
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR V+M+S I D I P G+ W+G+F +KTLYY EY N+G GAGTSKRV
Sbjct: 485 LGRPWKEYSRTVVMQSNIGDLIDPAGWSAWDGEFALKTLYYGEYLNQGAGAGTSKRVXXX 664
Query: 547 GFHVI 561
G+HVI
Sbjct: 665 GYHVI 679
>gb|CA934920.1|CA934920 MTU5TS.P25.G11 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 693
Score = 270 bits (583), Expect = 7e-072
Identities = 107/181 (59%), Positives = 130/181 (71%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLYVH+ RQFF NC ++GT+DFIFGN
Sbjct: 149 FENTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYVHSNRQFFINCFVAGTVDFIFGN 328
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 329 AAAVFQDCDIHARRPDSGQKNVVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 508
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGT V W
Sbjct: 509 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGSGAGTXSSVKWE 688
Query: 547 G 549
G
Sbjct: 689 G 691
Score = 154 bits (331), Expect = 4e-037
Identities = 86/181 (47%), Positives = 92/181 (50%)
Frame = -1 / -1
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
P +TLL VPAP P YSA* +VL K P P+G + S M MMT E SFQG P
Sbjct: 690 PSHLTLLXVPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSFQGLP 511
Query: 368 RYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAA 189
RY G L +G F +T P F LGSV P AVT F W GRR M Q W TAA
Sbjct: 510 RYVGKLL*TGSKSEVAPILLF*ITMPVF*LGSVLPWAVTTFFWPESGRRAWMSQSWKTAA 331
Query: 188 ELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLW 9
LPKMKS VP Q KN R T VSW AS *N AWCL PAV
Sbjct: 330 ALPKMKSTVPATKQFMKN*RFEWT*RVSW*ASMSHS*NAERSDPTLNATAWCLEGPAVFS 151
Query: 8 K 6
K
Sbjct: 150 K 148
>gb|CA928772.1|CA928772 MTU6TR.P6.F05 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 695
Score = 267 bits (577), Expect = 5e-071
Identities = 105/182 (57%), Positives = 131/182 (71%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY+C A+QDTLYVH+ RQFF NC+++GT+DFIFGN
Sbjct: 149 FQNTAGPSKHQAVALRVGSDLSAFYDCDMLAYQDTLYVHSNRQFFINCLVAGTVDFIFGN 328
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A V Q+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L + P+Y
Sbjct: 329 AAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQSVKSSFPTY 508
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGT RV W
Sbjct: 509 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGSGAGTXSRVKWE 688
Query: 547 GF 552
G+
Sbjct: 689 GY 694
Score = 96.4 bits (204), Expect(2) = 2e-033
Identities = 51/101 (50%), Positives = 53/101 (52%)
Frame = -1 / -3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGSVRP AVT F +GRR M Q T A LPKMKS VP QL KN R
Sbjct: 450 F*ITMPVF*LGSVRPWAVTMFF*PELGRRAWMSQSCKTTAALPKMKSTVPATRQLMKN*R 271
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T VSW AS Q *N AWC PAV WK
Sbjct: 270 FEWT*RVSW*ASMSQS*NAERSDPTRSATAWCFEGPAVFWK 148
Score = 66.1 bits (138), Expect(2) = 2e-033
Identities = 34/66 (51%), Positives = 38/66 (57%)
Frame = -1 / -3
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
P +TLL VPAP P YSA* +VL K P P+G + S M MMT E SFQG P
Sbjct: 690 PSHLTLLXVPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSFQGLP 511
Query: 368 RYEGIL 351
RY G L
Sbjct: 510 RYVGKL 493
>gb|CA927911.1|CA927911 MTU6TR.P14.D10 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 677
Score = 264 bits (572), Expect = 2e-070
Identities = 105/181 (58%), Positives = 131/181 (72%)
Frame = +1 / -2
Query: 19 AGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAV 198
A +HQAVALRV DL+AFY+C A+QDTLYVH+ RQFF NC+++GT+DFIFGN+A V
Sbjct: 676 ADPSKHQAVALRVGSDLSAFYDCDMLAYQDTLYVHSNRQFFINCLVAGTVDFIFGNAAVV 497
Query: 199 FQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRP 378
Q+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+YLGRP
Sbjct: 496 LQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVKSSFPTYLGRP 317
Query: 379 WKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHV 558
WKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGTS RV W G+ V
Sbjct: 316 WKEYSRTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGSGAGTSSRVKWEGYKV 137
Query: 559 I 561
I
Sbjct: 136 I 134
Score = 83.5 bits (176), Expect(2) = 4e-030
Identities = 47/97 (48%), Positives = 49/97 (50%)
Frame = -1 / +3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGSVRP AVT F +GRR M Q T A LPKMKS VP QL KN R
Sbjct: 387 F*ITMPVF*LGSVRPWAVTMFF*PELGRRAWMSQSCKTTAALPKMKSTVPATRQLMKN*R 566
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPA 18
T VSW AS Q *N AWC A
Sbjct: 567 FEWT*RVSW*ASMSQS*NAERSDPTRSATAWCFEGSA 677
Score = 67.5 bits (141), Expect(2) = 4e-030
Identities = 36/74 (48%), Positives = 42/74 (56%)
Frame = -1 / +3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P +TLL VPAP P YSA* +VL K P P+G + S M MMT E SF
Sbjct: 135 ITLYPSHLTLLEVPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSF 314
Query: 380 QGRPRYEGILKRSG 339
QG PRY G L +G
Sbjct: 315 QGLPRYVGKLLLTG 356
>emb|AJ292974.1|PTR292974 Populus tremula x Populus tremuloides mRNA for putative pectin
methylesterase (PME2 gene)
Length = 2088
Score = 264 bits (570), Expect = 5e-070
Identities = 106/187 (56%), Positives = 130/187 (69%)
Frame = +1 / +3
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
+ F NTAG QAVALRV D AAFY C +QDTL+VHA RQFF NC+I+GT+DFIF
Sbjct: 1161 IAFENTAGPSNRQAVALRVSSDRAAFYKCNVLGYQDTLHVHANRQFFINCLIAGTVDFIF 1340
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GNSA VFQ+C I RRP Q ++TA GR+DPN K+G+VIQ R+ L P R
Sbjct: 1341 GNSAVVFQDCDIHARRPNPGQTITITAQGRSDPNQKTGIVIQKSRIHATSDLLPVRSNFS 1520
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
+YLGRPWKE SR V+M+S+I+D I G++ W G + + TLYY EYNN G GA TS+RVT
Sbjct: 1521 AYLGRPWKEHSRTVVMQSSISDVINRAGWLEWRGKYALNTLYYGEYNNSGAGAATSERVT 1700
Query: 541 WPGFHVI 561
W G+ VI
Sbjct: 1701 WKGYKVI 1721
Score = 94.5 bits (200), Expect(2) = 1e-027
Identities = 47/101 (46%), Positives = 53/101 (52%)
Frame = -1 / -3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGS+ P AV W +GRR + Q W T AELPKMKS VP + Q KN R
Sbjct: 1468 F*ITMPVF*LGSLLPWAVIVIVWPGLGRRAWISQSWKTTAELPKMKSTVPAIKQFMKN*R 1289
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
A T+ VSW S L*N AW L PAV K
Sbjct: 1288 FAWTWRVSWYPSTLHL*NAARSELTRNATAWRLDGPAVFSK 1166
Score = 48.3 bits (99), Expect(2) = 1e-027
Identities = 30/70 (42%), Positives = 35/70 (50%)
Frame = -1 / -3
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
P QVTL V AP P LLYS * +V P P+ + S + M T E SFQG P
Sbjct: 1708 PFQVTLSEVAAPAPLLLYSP*YNVFSAYFPLHSSHPARFITSLIDDCMTTVLECSFQGLP 1529
Query: 368 RYEGILKRSG 339
RY L +G
Sbjct: 1528 RYAEKLLLTG 1499
>gb|CA825492.1|CA825492 R59H10 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 587
Score = 175 bits (377), Expect(2) = 2e-069
Identities = 71/123 (57%), Positives = 87/123 (70%)
Frame = +1 / +1
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
M F NTAG E+HQAVALR DL+ FY C F+A+QDTLYVH+ RQF+R C + GT+DFIF
Sbjct: 19 MTFRNTAGPEKHQAVALRNNADLSTFYRCSFEAYQDTLYVHSLRQFYRECDVYGTVDFIF 198
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GN+AAVFQNC + R+PM NQ+N+ TA GRTDPN +G+ I NC + L DR
Sbjct: 199 GNAAAVFQNCNLYARKPMLNQKNAFTAQGRTDPNQNTGISIHNCTIEAAPDLAMDRNSTD 378
Query: 361 SYL 369
S L
Sbjct: 379 SNL 387
Score = 106 bits (227), Expect(2) = 2e-069
Identities = 37/63 (58%), Positives = 49/63 (77%)
Frame = +1 / +1
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
++LGRPWKE+SR VIM+S I + I+P G++ WNG G+ T+YY E+ N GPGA TS+RV
Sbjct: 394 NFLGRPWKEYSRTVIMQSYIGELIQPVGWLEWNGTVGLDTIYYGEFQNYGPGANTSRRVQ 573
Query: 541 WPG 549
WPG
Sbjct: 574 WPG 582
Score = 86.3 bits (182), Expect(2) = 2e-027
Identities = 46/99 (46%), Positives = 49/99 (49%)
Frame = -1 / -1
Query: 311 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNW 132
Q M P F GSVRPCAV F WLS+G R QF TAA PKMKS VP + N
Sbjct: 329 QL*MEMPVFWFGSVRPCAVKAFFWLSIGLRAYKLQF*KTAAAFPKMKSTVPYTSHSL*NC 150
Query: 131 RRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAV 15
+ CT VS AS *N AWC S PAV
Sbjct: 149 LKECT*RVS**ASKLHR*NVERSALFLRATAWCFSGPAV 33
Score = 56.1 bits (116), Expect(2) = 2e-027
Identities = 31/61 (50%), Positives = 35/61 (57%)
Frame = -1 / -1
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
PG TLLLV APGP S ** V P PF P+G + S M M+T E SFQGRP
Sbjct: 581 PGHCTLLLVFAPGP*F*NSP**MVSNPTVPFHSSHPTG*ISSPMYDCMITVLEYSFQGRP 402
Query: 368 R 366
+
Sbjct: 401 K 399
>gb|CA928000.1|CA928000 MTU6TR.P15.E11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 663
Score = 261 bits (565), Expect = 2e-069
Identities = 103/176 (58%), Positives = 129/176 (73%)
Frame = +1 / -3
Query: 34 HQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCL 213
HQAVALRV DL+AFY+C A+QDTLYVH+ RQFF NC+++GT+DFIFGN+A V Q+C
Sbjct: 661 HQAVALRVGSDLSAFYDCDMLAYQDTLYVHSNRQFFINCLVAGTVDFIFGNAAVVLQDCD 482
Query: 214 IVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFS 393
I RRP Q+N VTA GRTDPN +G++IQ R+ L P + P+YLGRPWKE+S
Sbjct: 481 IHARRPNSGQKNMVTAQGRTDPNQNTGIMIQKSRIGATSDLQPVKSSFPAYLGRPWKEYS 302
Query: 394 RLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
R VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGTS RV W G+ VI
Sbjct: 301 RTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGSGAGTSSRVKWEGYKVI 134
Score = 79.4 bits (167), Expect(2) = 5e-029
Identities = 45/92 (48%), Positives = 47/92 (51%)
Frame = -1 / +3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F + P F LGSVRP AVT F +GRR M Q T A LPKMKS VP QL KN R
Sbjct: 387 F*IIMPVF*LGSVRPWAVTMFF*PELGRRAWMSQSCKTTAALPKMKSTVPATRQLMKN*R 566
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWC 33
T VSW AS Q *N AWC
Sbjct: 567 FEWT*RVSW*ASMSQS*NADRSDPTRSATAWC 662
Score = 68.0 bits (142), Expect(2) = 5e-029
Identities = 36/74 (48%), Positives = 42/74 (56%)
Frame = -1 / +3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P +TLL VPAP P YSA* +VL K P P+G + S M MMT E SF
Sbjct: 135 ITLYPSHLTLLEVPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSF 314
Query: 380 QGRPRYEGILKRSG 339
QG PRY G L +G
Sbjct: 315 QGLPRYAGKLLLTG 356
>gb|CV262571.1|CV262571 WS02019.B21_O21 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02019_O21 3', mRNA sequence
Length = 926
Score = 261 bits (565), Expect = 2e-069
Identities = 106/185 (57%), Positives = 132/185 (71%)
Frame = +1 / -2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAGA ++QAVALRV+ D AAFY C A+Q+TLYVH+ RQFF NC I+GT+DFIFGN
Sbjct: 898 FQNTAGASKYQAVALRVESDFAAFYKCGMLAYQNTLYVHSNRQFFTNCYIAGTVDFIFGN 719
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
SAAVFQ+C I RRP Q ++TA GR+DPN +G+VIQ R+ L R +Y
Sbjct: 718 SAAVFQDCDIRARRPNPGQTITITAQGRSDPNQNTGIVIQKSRIGATPDLQHARSNFSAY 539
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I+D I P G+ W G F + TL++AEY N G GAGT+ RV W
Sbjct: 538 LGRPWKEYSRTVIMQSSISDVISPAGWREWKGRFALNTLHFAEYENSGAGAGTAGRVPWK 359
Query: 547 GFHVI 561
G+ VI
Sbjct: 358 GYKVI 344
Score = 87.7 bits (185), Expect(2) = 7e-029
Identities = 49/101 (48%), Positives = 52/101 (51%)
Frame = -1 / +3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGS+ P AV +GRR M Q W TAAELPKMKS VP M Q KN R
Sbjct: 597 F*ITMPVF*LGSLLPWAVIVIVCPGLGRRARMSQSWKTAAELPKMKSTVPAM*QFVKN*R 776
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T V W AS L*N A L APAV WK
Sbjct: 777 FEWT*RVFW*ASMPHL*NAAKSDSTRSATA*YLEAPAVFWK 899
Score = 59.3 bits (123), Expect(2) = 7e-029
Identities = 32/66 (48%), Positives = 37/66 (56%)
Frame = -1 / +3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P Q TL VPAP P YSA +VL PF P+GL+ S M M+T E SF
Sbjct: 345 ITLYPFQGTLPAVPAPAPLFSYSAKCNVLSANLPFHSRHPAGLITSLMDDCMITVLEYSF 524
Query: 380 QGRPRY 363
QG PRY
Sbjct: 525 QGLPRY 542
>gb|CA929023.1|CA929023 MTU6TR.P9.F05 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 682
Score = 260 bits (563), Expect = 4e-069
Identities = 103/177 (58%), Positives = 129/177 (72%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY+C A+QDTLYVH+ R+FF NC+++GT+DFIFGN
Sbjct: 149 FQNTAGPSKHQAVALRVGSDLSAFYDCDILAYQDTLYVHSNRRFFINCLVAGTVDFIFGN 328
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A V Q+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 329 AAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVKSSFPTY 508
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRV 537
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGT RV
Sbjct: 509 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGSGAGTXSRV 679
Score = 96.8 bits (205), Expect(2) = 4e-033
Identities = 51/101 (50%), Positives = 53/101 (52%)
Frame = -1 / -2
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGSVRP AVT F +GRR M Q T A LPKMKS VP QL KN R
Sbjct: 450 F*ITMPVF*LGSVRPWAVTMFF*PELGRRAWMSQSCKTTAALPKMKSTVPATRQLMKNRR 271
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T VSW AS Q *N AWC PAV WK
Sbjct: 270 FEWT*RVSW*ASMSQS*NAERSDPTRSATAWCFEGPAVFWK 148
Score = 64.3 bits (134), Expect(2) = 4e-033
Identities = 34/67 (50%), Positives = 39/67 (58%)
Frame = -1 / -2
Query: 539 VTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRPRYE 360
+TLL VPAP P YSA* +VL K P P+G + S M MMT E SFQG PRY
Sbjct: 681 LTLLXVPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSFQGLPRYV 502
Query: 359 GILKRSG 339
G L +G
Sbjct: 501 GKLLLTG 481
>gb|CV233766.1|CV233766 WS01212.B21_E14 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01212_E14 3', mRNA sequence
Length = 908
Score = 260 bits (563), Expect = 4e-069
Identities = 98/185 (52%), Positives = 131/185 (70%)
Frame = +1 / -3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALR DL+ F+ C ++QD+LY H RQF+R C +SGT+DFIFG+
Sbjct: 744 FENTAGPSKHQAVALRSDSDLSVFFRCEIKSYQDSLYTHTMRQFYRECRVSGTVDFIFGD 565
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+ AVFQNC I+ R+ + +Q+N+VTAHGR DPN +G Q C + D L P +Y
Sbjct: 564 ATAVFQNCQILARKGLPDQKNTVTAHGRKDPNQPTGYSFQFCNISADIDLLPYVNSSYTY 385
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWK FSR +IM+S +++ I+PEG++ WNG+ + TLYY EY N GPGAG +RV WP
Sbjct: 384 LGRPWKNFSRTIIMQSYMSNAIRPEGWLEWNGNVYLDTLYYGEYINYGPGAGVGRRVRWP 205
Query: 547 GFHVI 561
GFH++
Sbjct: 204 GFHML 190
>gb|BU877822.1|BU877822 V039F08 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 707
Score = 260 bits (562), Expect = 6e-069
Identities = 100/184 (54%), Positives = 125/184 (67%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F N+AG +HQAVALR DL+AFY C F +QDTLYVH RQF+R C I GTIDFIFGN
Sbjct: 155 FENSAGPSKHQAVALRSGSDLSAFYQCSFVGYQDTLYVHTLRQFYRECDIYGTIDFIFGN 334
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A VFQN + R+P NQ+N TA GR DPN +G+ I NC++ L P + ++
Sbjct: 335 AAVVFQNSNLYARKPNSNQKNIFTAQGREDPNQNTGISILNCKVAAAADLIPVKSSFQTF 514
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR V + S I D + P G++ WN F + TLYY EY NRGPG+ TS RVTWP
Sbjct: 515 LGRPWKEYSRTVFLRSYIDDLVDPAGWLEWNASFALSTLYYREYMNRGPGSNTSARVTWP 694
Query: 547 GFHV 558
G+ +
Sbjct: 695 GYRI 706
Score = 79.4 bits (167), Expect(2) = 2e-024
Identities = 41/92 (44%), Positives = 44/92 (47%)
Frame = -1 / -3
Query: 293 PDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWRRACTY 114
P F LGS P AV F W G R F NT A LPKMKS+VP M+ R N R TY
Sbjct: 441 PVFWLGSSLPWAVNMFFWFEFGLRAYKLLF*NTTAALPKMKSIVPYMSHSR*NCRSVWTY 262
Query: 113 SVSWNASNRQL*NXXXXXXXXXXXAWCLSAPA 18
VSW + *N AWCL PA
Sbjct: 261 KVSW*PTKLH**NAERSEPLLKATAWCLLGPA 166
Score = 52.4 bits (108), Expect(2) = 2e-024
Identities = 27/61 (44%), Positives = 33/61 (54%)
Frame = -1 / -3
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
PG VTL LV PGP +YS ** VL F P+G +S++ T E SF GRP
Sbjct: 696 PGHVTLALVFEPGPLFMYSL**RVLNANDAFHSSHPAGSTRSSIYDRRKTVLEYSFHGRP 517
Query: 368 R 366
+
Sbjct: 516 K 514
>gb|CV267349.1|CV267349 WS02031.B21_I05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02031_I05 3', mRNA sequence
Length = 928
Score = 259 bits (559), Expect = 2e-068
Identities = 105/183 (57%), Positives = 131/183 (71%)
Frame = +1 / -1
Query: 13 NTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSA 192
NTAGA ++QAVALRV+ D AAFY C A+Q+TLYVH+ RQFF NC I+GT+DFIFGNSA
Sbjct: 892 NTAGASKYQAVALRVESDFAAFYKCGMLAYQNTLYVHSNRQFFTNCYIAGTVDFIFGNSA 713
Query: 193 AVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLG 372
AVFQ+C I RRP Q ++TA GR+DPN +G+VIQ R+ L R +YLG
Sbjct: 712 AVFQDCDIRARRPNPGQTITITAQGRSDPNQNTGIVIQKSRIGATPDLQHARSNFSAYLG 533
Query: 373 RPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGF 552
RPWKE+SR VIM+S+I+D I P G+ W G F + TL++AEY N G GAGT+ RV W G+
Sbjct: 532 RPWKEYSRTVIMQSSISDVISPAGWREWKGRFALNTLHFAEYENSGAGAGTAGRVPWKGY 353
Query: 553 HVI 561
VI
Sbjct: 352 KVI 344
Score = 86.3 bits (182), Expect(2) = 2e-028
Identities = 48/101 (47%), Positives = 52/101 (51%)
Frame = -1 / +3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGS+ P AV +GRR M Q W TAAELPKMKS VP M Q KN R
Sbjct: 597 F*ITMPVF*LGSLLPWAVIVIVCPGLGRRARMSQSWKTAAELPKMKSTVPAM*QFVKN*R 776
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T V W AS L*N A L APAV W+
Sbjct: 777 FEWT*RVFW*ASMPHL*NAAKSDSTRSATA*YLEAPAVFWR 899
Score = 59.3 bits (123), Expect(2) = 2e-028
Identities = 32/66 (48%), Positives = 37/66 (56%)
Frame = -1 / +3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P Q TL VPAP P YSA +VL PF P+GL+ S M M+T E SF
Sbjct: 345 ITLYPFQGTLPAVPAPAPLFSYSAKCNVLSANLPFHSRHPAGLITSLMDDCMITVLEYSF 524
Query: 380 QGRPRY 363
QG PRY
Sbjct: 525 QGLPRY 542
>gb|CX174688.1|CX174688 E09_69-90_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 695
Score = 257 bits (556), Expect = 4e-068
Identities = 101/185 (54%), Positives = 129/185 (69%)
Frame = +1 / +3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F N+AG +HQAVA+RV DL+AFY C A+QDTLYVH+ RQF+ +C+I G++DFIFGN
Sbjct: 30 FQNSAGPSKHQAVAIRVGSDLSAFYRCDMIAYQDTLYVHSLRQFYVSCIIIGSVDFIFGN 209
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AA+FQ+C I RRP Q+N VTA GR DPN +G+VIQ CR+ Q L SY
Sbjct: 210 AAAIFQDCDIHARRPNPGQKNMVTAQGRNDPNENTGIVIQKCRIGATQDLLAANSSFRSY 389
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWK +SR +IM++ I+D I P G+ W+GDF + TL Y EY N G GA T+ RV W
Sbjct: 390 LGRPWKLYSRTIIMQTEISDIIDPAGWFEWDGDFALDTLVYREYQNTGLGANTANRVNWK 569
Query: 547 GFHVI 561
GF V+
Sbjct: 570 GFKVV 584
Score = 108 bits (231), Expect(2) = 2e-032
Identities = 49/97 (50%), Positives = 53/97 (54%)
Frame = -1 / -2
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
FW+T P F LGS+RPCAVT F W +GRR M Q WN AA LP +KS P M QL N R
Sbjct: 331 FWITMPVFSLGSLRPCAVTIFFWPGLGRRACMSQSWNIAAALPNIKSTEPIMMQLT*N*R 152
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPA 18
CT VSW A L*N AWC PA
Sbjct: 151 SECT*RVSWYAIMSHL*NAERSDPTRIATAWCFDGPA 41
Score = 50.1 bits (103), Expect(2) = 2e-032
Identities = 29/74 (39%), Positives = 38/74 (51%)
Frame = -1 / -2
Query: 581 CSASFRPMTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMM 402
C++ T P Q TLL V AP P YS * +V KSP P+G + S + + +M
Sbjct: 604 CTSIALVTTLKPFQFTLLAVLAPSPVF*YSL*TNVSRAKSPSHSNQPAGSIISLISVCIM 425
Query: 401 TRRENSFQGRPRYE 360
E SF G P+YE
Sbjct: 424 IVLEYSFHGLPKYE 383
>gb|CA928375.1|CA928375 MTU6TR.P1.H08 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 666
Score = 257 bits (555), Expect = 5e-068
Identities = 103/172 (59%), Positives = 125/172 (72%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLYVH+ RQFF NC ++GT+DFIFGN
Sbjct: 149 FENTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYVHSNRQFFINCFVAGTVDFIFGN 328
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 329 AAAVFQDCDIHARRPDSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 508
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAG 522
LGRPWKE+SR VIM+S+I D I+P G W+G F + TL+YAEY N G GAG
Sbjct: 509 LGRPWKEYSRTVIMQSSITDVIQPAG*HEWSGSFALSTLFYAEYQNSGSGAG 664
Score = 144 bits (310), Expect = 3e-034
Identities = 82/173 (47%), Positives = 87/173 (50%)
Frame = -1 / -1
Query: 524 VPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRPRYEGILKR 345
VPAP P YSA* +VL K P P+G + S M MMT E SFQG PRY G L
Sbjct: 666 VPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSFQGLPRYVGKLL* 487
Query: 344 SGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSM 165
+G F +T P F LGSV P AVT F W GRR M Q W TAA LPKMKS
Sbjct: 486 TGSKSEVAPILLF*ITMPVF*LGSVLPWAVTMFFWPESGRRAWMSQSWKTAAALPKMKST 307
Query: 164 VPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
VP Q KN R T VSW AS *N AWCL PAV K
Sbjct: 306 VPATKQFMKN*RFEWT*RVSW*ASMSHS*NAERSDPTLNATAWCLEGPAVFSK 148
>gb|CA928878.1|CA928878 MTU6TR.P7.H11 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 681
Score = 257 bits (555), Expect = 5e-068
Identities = 102/176 (57%), Positives = 127/176 (72%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY+C A+QDTLYVH+ RQFF NC+++GT+DFIFGN
Sbjct: 152 FQNTAGPSKHQAVALRVGSDLSAFYDCDMLAYQDTLYVHSNRQFFINCLVAGTVDFIFGN 331
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A V Q+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L + P+Y
Sbjct: 332 AAVVLQDCDIHARRPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQSVKSSFPTY 511
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKR 534
LGRPWKE+SR VIM+S+I D I+P G+ W+G F + TL+YAEY N G GAGT R
Sbjct: 512 LGRPWKEYSRTVIMQSSITDVIQPAGWHEWSGSFALSTLFYAEYQNSGSGAGTXSR 679
Score = 96.4 bits (204), Expect(2) = 2e-032
Identities = 51/101 (50%), Positives = 53/101 (52%)
Frame = -1 / -1
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGSVRP AVT F +GRR M Q T A LPKMKS VP QL KN R
Sbjct: 453 F*ITMPVF*LGSVRPWAVTMFF*PELGRRAWMSQSCKTTAALPKMKSTVPATRQLMKN*R 274
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T VSW AS Q *N AWC PAV WK
Sbjct: 273 FEWT*RVSW*ASMSQS*NAERSDPTRSATAWCFEGPAVFWK 151
Score = 62.5 bits (130), Expect(2) = 2e-032
Identities = 33/62 (53%), Positives = 36/62 (58%)
Frame = -1 / -1
Query: 536 TLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRPRYEG 357
TLL VPAP P YSA* +VL K P P+G + S M MMT E SFQG PRY G
Sbjct: 681 TLLXVPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSFQGLPRYVG 502
Query: 356 IL 351
L
Sbjct: 501 KL 496
>gb|BP930503.1|BP930503 BP930503 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-010_O08.r 3', mRNA sequence
Length = 701
Score = 256 bits (553), Expect = 1e-067
Identities = 100/170 (58%), Positives = 125/170 (73%)
Frame = +1 / -1
Query: 52 RVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRP 231
RV DL+AFY+C A+QDTLYVH+ RQFF NC+++GT+DFIFGN+A V Q+C I RRP
Sbjct: 701 RVGSDLSAFYDCDMLAYQDTLYVHSNRQFFINCLVAGTVDFIFGNAAVVLQDCDIHARRP 522
Query: 232 MDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIME 411
Q+N VTA GRTDPN +G+VIQ R+ L P + P+YLGRPWKE+SR VIM+
Sbjct: 521 NSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVKSSFPTYLGRPWKEYSRTVIMQ 342
Query: 412 STIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
S+I D I+P G+ W+G F + TLYYAEY N G GAGTS+RVTW G+ VI
Sbjct: 341 SSITDVIQPAGWSEWSGSFALNTLYYAEYQNSGAGAGTSRRVTWKGYRVI 192
Score = 75.3 bits (158), Expect(2) = 1e-027
Identities = 43/78 (55%), Positives = 45/78 (57%)
Frame = -1 / +1
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGSVRP AVT F +GRR M Q T A LPKMKS VP QL KN R
Sbjct: 445 F*ITMPVF*LGSVRPWAVTIFF*PELGRRAWMSQSCKTTAALPKMKSTVPATRQLMKN*R 624
Query: 128 RACTYSVSWNASNRQL*N 75
T VSW AS Q *N
Sbjct: 625 FEWT*RVSW*ASMSQS*N 678
Score = 67.5 bits (141), Expect(2) = 1e-027
Identities = 37/74 (50%), Positives = 42/74 (56%)
Frame = -1 / +1
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P QVTLL VPAP P YSA* +V K P P+G + S M MMT E SF
Sbjct: 193 ITLYPFQVTLLEVPAPAPEF*YSA*YNVFSAKLPLHSDHPAGCITSVMDDCMMTVLEYSF 372
Query: 380 QGRPRYEGILKRSG 339
QG PRY G L +G
Sbjct: 373 QGLPRYVGKLLLTG 414
>emb|AJ292975.1|PTR292975 Populus tremula x Populus tremuloides mRNA for putative pectin
methylesterase (PME3 gene)
Length = 2048
Score = 254 bits (550), Expect = 3e-067
Identities = 104/185 (56%), Positives = 131/185 (70%)
Frame = +1 / +3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAGA ++QAVALRV+ D AAFY C A+Q+TL+VH+ RQFF NC I+GT+DFIFGN
Sbjct: 1122 FQNTAGASKYQAVALRVESDFAAFYKCGMVAYQNTLHVHSNRQFFTNCYIAGTVDFIFGN 1301
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
SAAVFQ+C I RR Q ++TA GR+DPN +G+VIQ R+ L R ++
Sbjct: 1302 SAAVFQDCDIRARRANPGQTITITAQGRSDPNQNTGIVIQKSRIGGTPDLQHARSNFSAF 1481
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I+D I P G+ W G F + TL++AEY N G GAGTS RV W
Sbjct: 1482 LGRPWKEYSRTVIMQSSISDVISPAGWREWKGRFALDTLHFAEYENSGAGAGTSGRVPWK 1661
Query: 547 GFHVI 561
G+ VI
Sbjct: 1662 GYKVI 1676
Score = 93.2 bits (197), Expect(2) = 2e-028
Identities = 48/101 (47%), Positives = 53/101 (52%)
Frame = -1 / -2
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGS+ P AV + RR M Q W TAAELPKMKS VP M Q KN R
Sbjct: 1423 F*ITMPVF*LGSLLPWAVIVIVCPGLARRARMSQSWKTAAELPKMKSTVPAM*QFVKN*R 1244
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T+ V W A+ L*N AW L APAV WK
Sbjct: 1243 FEWTWRVFW*ATMPHL*NAAKSDSTRSATAWYLEAPAVFWK 1121
Score = 52.4 bits (108), Expect(2) = 2e-028
Identities = 30/65 (46%), Positives = 35/65 (53%)
Frame = -1 / -2
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P Q TL VPAP P YSA +V PF P+GL+ S M M+T E SF
Sbjct: 1675 ITLYPFQGTLPEVPAPAPLFSYSAKCNVSSANLPFHSRHPAGLITSLMDDCMITVLEYSF 1496
Query: 380 QGRPR 366
QG PR
Sbjct: 1495 QGLPR 1481
>emb|AJ292976.1|PTR292976 Populus tremula x Populus tremuloides partial mRNA for putative
pectin methylesterase (PME4 gene)
Length = 1855
Score = 254 bits (550), Expect = 3e-067
Identities = 105/185 (56%), Positives = 130/185 (70%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAGA ++QAVALRV+ D AAFY C A+Q+TL+VH+ RQFF N I+GT+DFIFGN
Sbjct: 959 FQNTAGASKYQAVALRVESDFAAFYKCGVVAYQNTLHVHSNRQFFTNSYIAGTVDFIFGN 1138
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
SAAVFQ+C I RRP Q ++TA GR+DPN +G+VIQ R+ L R Y
Sbjct: 1139 SAAVFQDCDIRARRPNPGQTITITAQGRSDPNQNTGIVIQKSRIGATPDLQHARSNFSVY 1318
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE+SR VIM+S+I+D I P G+ W G F + TL++AEY N G GAGTS RV W
Sbjct: 1319 LGRPWKEYSRTVIMQSSISDVISPAGWREWKGRFALNTLHFAEYENSGAGAGTSGRVPWK 1498
Query: 547 GFHVI 561
G+ VI
Sbjct: 1499 GYKVI 1513
Score = 96.4 bits (204), Expect(2) = 1e-029
Identities = 48/101 (47%), Positives = 54/101 (53%)
Frame = -1 / -2
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGS+ P AV +GRR M Q W TAAELPKMKS VP M + KN R
Sbjct: 1260 F*ITMPVF*LGSLLPWAVIVIVCPGLGRRARMSQSWKTAAELPKMKSTVPAMYEFVKN*R 1081
Query: 128 RACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T+ V W A+ L*N AW L APAV WK
Sbjct: 1080 FEWTWRVFW*ATTPHL*NAAKSDSTRSATAWYLEAPAVFWK 958
Score = 53.3 bits (110), Expect(2) = 1e-029
Identities = 30/65 (46%), Positives = 35/65 (53%)
Frame = -1 / -2
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P Q TL VPAP P YSA +V PF P+GL+ S M M+T E SF
Sbjct: 1512 ITLYPFQGTLPEVPAPAPLFSYSAKCNVFSANLPFHSRHPAGLITSLMDDCMITVLEYSF 1333
Query: 380 QGRPR 366
QG PR
Sbjct: 1332 QGLPR 1318
>gb|CK096353.1|CK096353 UB11CPF02.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB11CPF02 3', mRNA sequence
Length = 840
Score = 254 bits (549), Expect = 4e-067
Identities = 103/185 (55%), Positives = 131/185 (70%)
Frame = +1 / -3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG ++QAVALRV+ D AAFY C +Q+TLYVH+ RQFFRNC I+GTIDFIFGN
Sbjct: 808 FQNTAGPSKYQAVALRVESDFAAFYKCGMVGYQNTLYVHSNRQFFRNCFIAGTIDFIFGN 629
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP Q ++TA GR+DP +G+VIQ CR+ L P R +Y
Sbjct: 628 AAAVFQDCDIRARRPNPGQTITITAQGRSDPTQNTGIVIQKCRIGVTSDLHPVRSNFSAY 449
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWP 546
LGRPWKE++R VIM+S+++D I G+ G F + TL +AEY N G GAGTS+RVTW
Sbjct: 448 LGRPWKEYARTVIMQSSLSDVIHLAGWNGLKGRFALSTLSFAEYENSGAGAGTSERVTWE 269
Query: 547 GFHVI 561
G+ +I
Sbjct: 268 GYKMI 254
Score = 69.8 bits (146), Expect(3) = 9e-025
Identities = 32/60 (53%), Positives = 37/60 (61%)
Frame = -1 / +3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F +GS+ P AV W +GRR M Q W TAA LPKMKS+VP M Q KN R
Sbjct: 507 F*ITIPVF*VGSLLPWAVIVIVWPGLGRRARMSQSWKTAAALPKMKSIVPAMKQFLKN*R 686
Score = 57.0 bits (118), Expect(3) = 9e-025
Identities = 32/70 (45%), Positives = 37/70 (52%)
Frame = -1 / +3
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
P QVTL VPAP P YSA +VL K PF P+ + S M+T R SFQG P
Sbjct: 267 PSQVTLSEVPAPAPLFSYSANDNVLSAKRPFNPFHPARCITSLKDDCMITVRAYSFQGLP 446
Query: 368 RYEGILKRSG 339
RY L +G
Sbjct: 447 RYAEKLLLTG 476
Score = 24.0 bits (46), Expect(3) = 9e-025
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = -1 / +3
Query: 83 L*NXXXXXXXXXXXAWCLSAPAVLWK 6
L* AW L PAV WK
Sbjct: 732 L*KAAKSDSTRSATAWYLEGPAVFWK 809
>gb|CV231563.1|CV231563 WS0194.B21_O16 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_O16 3', mRNA sequence
Length = 859
Score = 250 bits (541), Expect = 5e-066
Identities = 98/187 (52%), Positives = 123/187 (65%)
Frame = +1 / -1
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
M F N AG +HQAVALRV D A Y C +QDTLYVH+ RQF+R C I GT+DFIF
Sbjct: 826 MTFENWAGPAKHQAVALRVGADHAVVYRCSIIGYQDTLYVHSNRQFYRECDIYGTVDFIF 647
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GN+A V QNC I R+PM +Q+N++TA R DPN +G+ I CR++ L P + P
Sbjct: 646 GNAAVVLQNCSIYARKPMASQKNTITAQNRKDPNQNTGISIHACRILAASDLAPSKGTFP 467
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
+YLGRPWK +SR V M S + D I P G++ W+ F + TLYY EY N GPGA +RV
Sbjct: 466 TYLGRPWKLYSRTVYMLSFMGDHIHPRGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVK 287
Query: 541 WPGFHVI 561
WPG+ VI
Sbjct: 286 WPGYRVI 266
Score = 121 bits (258), Expect = 5e-027
Identities = 74/181 (40%), Positives = 84/181 (46%)
Frame = -1 / +3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
MT PG TL APGP +YS * V P G M S M +M T E SF
Sbjct: 267 MTRYPGHFTLCPTAAPGP*FMYSP*YKVSSANDASHSSHPLG*M*SPMNDNMYTVLEYSF 446
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
GRPRY G + G + Q W+ P F LGS+R AV F W ++G R M QF
Sbjct: 447 HGRPRYVGKVPFDGARSDAARILQAWIDMPVF*LGSLRFWAVMVFFWEAIGLRA*MLQFC 626
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAP 21
NT A LP MKS VP M+ NWR CT VSW L* A CL+ P
Sbjct: 627 NTTAALPNMKSTVP*MSHSL*NWRFECT*RVSW*PMMLHL*TTAWSAPTRRATA*CLAGP 806
Query: 20 A 18
A
Sbjct: 807 A 809
>gb|DT522062.1|DT522062 WS02035.B21_P06 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_P06 3', mRNA sequence
Length = 835
Score = 250 bits (541), Expect = 5e-066
Identities = 98/187 (52%), Positives = 123/187 (65%)
Frame = +1 / -2
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
M F N AG +HQAVALRV D A Y C +QDTLYVH+ RQF+R C I GT+DFIF
Sbjct: 825 MTFENWAGPAKHQAVALRVGADHAVVYRCSIIGYQDTLYVHSNRQFYRECDIYGTVDFIF 646
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GN+A V QNC I R+PM +Q+N++TA R DPN +G+ I CR++ L P + P
Sbjct: 645 GNAAVVLQNCSIYARKPMASQKNTITAQNRKDPNQNTGISIHACRILAASDLAPSKGTFP 466
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
+YLGRPWK +SR V M S + D I P G++ W+ F + TLYY EY N GPGA +RV
Sbjct: 465 TYLGRPWKLYSRTVYMLSFMGDHIHPRGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVK 286
Query: 541 WPGFHVI 561
WPG+ VI
Sbjct: 285 WPGYRVI 265
Score = 121 bits (258), Expect = 5e-027
Identities = 74/181 (40%), Positives = 84/181 (46%)
Frame = -1 / +2
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
MT PG TL APGP +YS * V P G M S M +M T E SF
Sbjct: 266 MTRYPGHFTLCPTAAPGP*FMYSP*YKVSSANDASHSSQPLG*M*SPMNDNMYTVLEYSF 445
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
GRPRY G + G + Q W+ P F LGS+R AV F W ++G R M QF
Sbjct: 446 HGRPRYVGKVPFDGARSDAARILQAWIDMPVF*LGSLRFWAVMVFFWEAIGLRA*MLQFC 625
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAP 21
NT A LP MKS VP M+ NWR CT VSW L* A CL+ P
Sbjct: 626 NTTAALPNMKSTVP*MSHSL*NWRFECT*RVSW*PMMLHL*TTAWSAPTRRATA*CLAGP 805
Query: 20 A 18
A
Sbjct: 806 A 808
>gb|CA928533.1|CA928533 MTU6TR.P3.G08 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 631
Score = 250 bits (540), Expect = 6e-066
Identities = 98/173 (56%), Positives = 125/173 (72%)
Frame = +1 / -1
Query: 64 DLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQ 243
DL+AFY+C A+QDTLYVH+ RQFF NC+++GT+DFIFGN+A V Q+C I RRP Q
Sbjct: 631 DLSAFYDCDMLAYQDTLYVHSNRQFFINCLVAGTVDFIFGNAAVVLQDCGIHARRPNSGQ 452
Query: 244 QNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIA 423
+N VTA GRTDPN +G+VIQ R+ L P + P+YLGRPWKE+SR VIM+S+I
Sbjct: 451 KNMVTAQGRTDPNQNTGIVIQKSRIGATSDLQPVKSSFPTYLGRPWKEYSRTVIMQSSIT 272
Query: 424 DFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVIGRKDAEQ 582
D I+P G+ W+G F + TL+YAEY N G GAGTS RV W G+ VI R++ Q
Sbjct: 271 DVIQPAGWHEWSGSFALSTLFYAEYQNSGSGAGTSSRVKWEGYKVITRENETQ 113
Score = 75.3 bits (158), Expect(2) = 1e-027
Identities = 43/78 (55%), Positives = 45/78 (57%)
Frame = -1 / +3
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
F +T P F LGSVRP AVT F +GRR M Q T A LPKMKS VP QL KN R
Sbjct: 387 F*ITMPVF*LGSVRPWAVTMFF*PELGRRAWMPQSCKTTAALPKMKSTVPATRQLMKN*R 566
Query: 128 RACTYSVSWNASNRQL*N 75
T VSW AS Q *N
Sbjct: 567 FEWT*RVSW*ASMSQS*N 620
Score = 67.5 bits (141), Expect(2) = 1e-027
Identities = 36/74 (48%), Positives = 42/74 (56%)
Frame = -1 / +3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
+T P +TLL VPAP P YSA* +VL K P P+G + S M MMT E SF
Sbjct: 135 ITLYPSHLTLLEVPAPDPEF*YSA*NNVLSAKLPLHSCHPAGCITSVMDDCMMTVLEYSF 314
Query: 380 QGRPRYEGILKRSG 339
QG PRY G L +G
Sbjct: 315 QGLPRYVGKLLLTG 356
>gb|CV231440.1|CV231440 WS0194.B21_I22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_I22 3', mRNA sequence
Length = 939
Score = 250 bits (540), Expect = 6e-066
Identities = 98/187 (52%), Positives = 122/187 (65%)
Frame = +1 / +3
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
M F N AG +HQAVALRV D A Y C +QDTLYVH+ RQFFR C I GT+DFIF
Sbjct: 18 MTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIF 197
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GN+A VFQNC I R+PM Q+N++TA R DPN +G+ I CR++ L P + P
Sbjct: 198 GNAAVVFQNCSIYARKPMAFQKNTITAQNRKDPNQNTGISIHACRILATSDLTPLKGSFP 377
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
++LGRPWK +SR V M S I D + P G++ WN F + TLYY EY N GPG +RV
Sbjct: 378 TFLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVK 557
Query: 541 WPGFHVI 561
WPG+ V+
Sbjct: 558 WPGYRVV 578
Score = 87.7 bits (185), Expect(2) = 2e-024
Identities = 44/98 (44%), Positives = 50/98 (51%)
Frame = -1 / -3
Query: 311 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNW 132
Q W+ P F LGS+R AV F W ++G M QF NT A LP MKS VP M+ KNW
Sbjct: 328 QAWIDMPVF*LGSLRFWAVMVFFWKAIGFLAYMLQF*NTTAALPNMKSTVP*MSHSLKNW 149
Query: 131 RRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPA 18
R CT VSW L* AWCL+ PA
Sbjct: 148 RFECT*RVSW*PMMLHL*TTAWSAPTRRATAWCLAGPA 35
Score = 44.1 bits (90), Expect(2) = 2e-024
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = -1 / -3
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
PG +TL PGP +YS * +V F P G S M +M T E SF GRP
Sbjct: 565 PGHLTLCPTAPPGP*FMYSP*YNVSSANVVFHSSHPLG*T*SPMYDNMYTVLE*SFHGRP 386
Query: 368 RYEGILKRSG 339
R G L +G
Sbjct: 385 RNVGKLPFNG 356
>gb|DT526697.1|DT526697 WS02048.C21_L16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02048_L16 3', mRNA sequence
Length = 887
Score = 250 bits (540), Expect = 6e-066
Identities = 98/187 (52%), Positives = 122/187 (65%)
Frame = +1 / -2
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
M F N AG +HQAVALRV D A Y C +QDTLYVH+ RQFFR C I GT+DFIF
Sbjct: 778 MTFENWAGPAKHQAVALRVGADHAVVYRCNIIGYQDTLYVHSNRQFFRECDIYGTVDFIF 599
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GN+A VFQNC I R+PM Q+N++TA R DPN +G+ I CR++ L P + P
Sbjct: 598 GNAAVVFQNCSIYARKPMAFQKNTITAQNRKDPNQNTGISIHACRILATSDLTPLKGSFP 419
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
++LGRPWK +SR V M S I D + P G++ WN F + TLYY EY N GPG +RV
Sbjct: 418 TFLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVK 239
Query: 541 WPGFHVI 561
WPG+ V+
Sbjct: 238 WPGYRVV 218
Score = 80.8 bits (170), Expect(2) = 2e-022
Identities = 43/98 (43%), Positives = 49/98 (50%)
Frame = -1 / +3
Query: 311 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNW 132
Q W+ P F LGS+R AV F W ++G M QF NT A LP MKS VP M+ KNW
Sbjct: 468 QAWIDMPVF*LGSLRFWAVMVFFWKAIGFLAYMLQF*NTTAALPNMKSTVP*MSHSLKNW 647
Query: 131 RRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPA 18
R CT VSW L* A CL+ PA
Sbjct: 648 RFECT*RVSW*PMMLHL*TTAWSAPTRRATA*CLAGPA 761
Score = 44.1 bits (90), Expect(2) = 2e-022
Identities = 28/70 (40%), Positives = 33/70 (47%)
Frame = -1 / +3
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
PG +TL PGP +YS * +V F P G S M +M T E SF GRP
Sbjct: 231 PGHLTLCPTAPPGP*FMYSP*YNVSSANVVFHSSHPLG*T*SPMYDNMYTVLE*SFHGRP 410
Query: 368 RYEGILKRSG 339
R G L +G
Sbjct: 411 RNVGKLPFNG 440
>gb|CK096229.1|CK096229 UA52DPF03.3pR Populus dormant cambium cDNA library Populus tremula
cDNA clone UA52DPF03 3', mRNA sequence
Length = 873
Score = 248 bits (536), Expect = 2e-065
Identities = 97/187 (51%), Positives = 123/187 (65%)
Frame = +1 / -2
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
M F N AG +HQAVALRV D A Y C +QDTLYVH+ RQF+R C I GT+DFIF
Sbjct: 782 MTFENWAGPAKHQAVALRVGADHAVVYRCSIIGYQDTLYVHSNRQFYRECDIYGTVDFIF 603
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GN+A V Q+C I R+PM +Q+N++TA R DPN +G+ I CR++ L P + P
Sbjct: 602 GNAAVVLQHCSIYARKPMASQKNTITAQNRKDPNQNTGISIHACRILAAPDLAPSKGTFP 423
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
+YLGRPWK +SR V M S + D I P G++ W+ F + TLYY EY N GPGA +RV
Sbjct: 422 TYLGRPWKLYSRTVYMLSFMGDHIHPRGWLEWDASFALDTLYYGEYMNSGPGAAVGQRVK 243
Query: 541 WPGFHVI 561
WPG+ VI
Sbjct: 242 WPGYRVI 222
Score = 119 bits (254), Expect = 2e-026
Identities = 72/181 (39%), Positives = 82/181 (45%)
Frame = -1 / +1
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
MT PG TL APGP +YS * V P G M S M +M T E SF
Sbjct: 223 MTRYPGHFTLCPTAAPGPEFMYSP*YKVSSANDASHSSHPLGWM*SPMNDNMYTVLEYSF 402
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
GRPRY G + G + Q W+ P F LGS+R AV F W ++G R M Q
Sbjct: 403 HGRPRYVGKVPFDGARSGAARILQAWIDMPVF*LGSLRFWAVMVFFWEAIGLRA*MLQCC 582
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAP 21
NT A P MKS VP M+ NWR CT VSW L* A CL+ P
Sbjct: 583 NTTAAFPNMKSTVP*MSHSL*NWRFECT*RVSW*PMMLHL*TTAWSAPTRRATA*CLAGP 762
Query: 20 A 18
A
Sbjct: 763 A 765
>gb|CK319620.1|CK319620 B9SP05f02 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 878
Score = 247 bits (534), Expect = 4e-065
Identities = 98/187 (52%), Positives = 120/187 (64%)
Frame = +1 / +1
Query: 1 MGFHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIF 180
M F N AG HQAVALRV D A Y C QDTLYVH+ RQFFR C I GT+DFIF
Sbjct: 46 MTFENWAGPAMHQAVALRVGADHAVVYRCNIIGHQDTLYVHSNRQFFRECDIYGTVDFIF 225
Query: 181 GNSAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIP 360
GN+A VFQNC I R+PM Q+N++TA R DPN +G+ I CR++ L P + P
Sbjct: 226 GNAAVVFQNCSIYARKPMAFQKNTITAQNRKDPNQNTGISIHACRILASSDLTPLKGSFP 405
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
++LGRPWK +SR V M S I D + P G++ WN F + TLYY EY N GPG +RV
Sbjct: 406 TFLGRPWKLYSRTVYMLSYIGDHVHPRGWLEWNTTFALDTLYYGEYMNYGPGGAVGQRVK 585
Query: 541 WPGFHVI 561
WPG+ V+
Sbjct: 586 WPGYRVV 606
Score = 126 bits (270), Expect = 1e-028
Identities = 72/177 (40%), Positives = 84/177 (47%)
Frame = -1 / -1
Query: 548 PGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRP 369
PG +TL PGP +YS * +V F P G S M +M T E SF GRP
Sbjct: 593 PGHLTLCPTAPPGP*FMYSP*YNVSSANVVFHSSHPLGWT*SPMYDNMYTVLEYSFHGRP 414
Query: 368 RYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAA 189
R G L +G Q W+ P F LGS+R AV F W ++G M QF NT A
Sbjct: 413 RNVGKLPFNGVRSEEARILQAWIDMPVF*LGSLRFWAVMVFFWKAIGFLAYMLQF*NTTA 234
Query: 188 ELPKMKSMVPEMTQLRKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPA 18
LP MKS VP M+ RKNWR CT VSW L* AWC++ PA
Sbjct: 233 ALPNMKSTVP*MSHSRKNWRFECT*RVSWWPMMLHL*TTAWSAPTRRATAWCMAGPA 63
>gb|DN493683.1|DN493683 G105P21.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G105P21 5', mRNA sequence
Length = 677
Score = 244 bits (528), Expect = 3e-064
Identities = 93/170 (54%), Positives = 115/170 (67%)
Frame = +1 / +1
Query: 79 YNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQQNSVT 258
Y C F+A+QDTLY H+ RQF+R C I GT+DFIFGN+A VFQNC + R PM Q N++T
Sbjct: 1 YGCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPMSGQFNAIT 180
Query: 259 AHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFIKP 438
A GRTDPN +G I NC + L + +YLGRPWK++SR V M+S + I P
Sbjct: 181 AQGRTDPNQNTGTSIHNCTIRAADDLASSNTTVQTYLGRPWKQYSRTVYMQSFMDSLINP 360
Query: 439 EGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVIGRKDAEQFT 588
G+ W+GDF + T YYAEYNN GPG+ T+ RVTWPGFHVI DA FT
Sbjct: 361 AGWQIWSGDFALNTSYYAEYNNSGPGSNTTNRVTWPGFHVINATDAVNFT 510
Score = 71.6 bits (150), Expect(2) = 7e-023
Identities = 35/75 (46%), Positives = 42/75 (56%)
Frame = -1 / -1
Query: 587 VNCSASFRPMTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLS 408
V +AS +TW PG VTL +V PGP LLYSA* V KSP P+G + +M L
Sbjct: 509 VKLTASVALITWKPGHVTLFVVLEPGPELLYSA*YDVFSAKSPLHICQPAGFISESMKLC 330
Query: 407 MMTRRENSFQGRPRY 363
+ T E F G PRY
Sbjct: 329 I*TVLEYCFHGLPRY 285
Score = 55.1 bits (114), Expect(2) = 7e-023
Identities = 31/76 (40%), Positives = 36/76 (47%)
Frame = -1 / -1
Query: 311 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNW 132
Q + P F GSV P AV +G R QFW T A LP +KS VP ++ N
Sbjct: 233 QLCIDVPVFWFGSVLPWAVMALN*PLIGSRGYKLQFWKTTAALPNIKSTVP*ISHSL*NC 54
Query: 131 RRACTYSVSWNASNRQ 84
R Y VSW AS Q
Sbjct: 53 LREWVYKVSWYASKLQ 6
>gb|CV131751.1|CV131751 L3P05h06 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 577
Score = 243 bits (525), Expect = 7e-064
Identities = 91/159 (57%), Positives = 116/159 (72%)
Frame = +1 / +1
Query: 85 CRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQQNSVTAH 264
CR DA+QDTLY H+ RQF+R+ I+GT+DFIFGN+A V QNC +V R+PM Q+N VTA
Sbjct: 64 CRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFGNAAVVLQNCKLVPRKPMSGQKNMVTAQ 243
Query: 265 GRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFIKPEG 444
GRTDPN +G IQ C ++ L P + S+LGRPWKE+SR V+M+S I D I P G
Sbjct: 244 GRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLGRPWKEYSRTVVMQSNIGDLIDPAG 423
Query: 445 YMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
+ W+G+F ++TLYY EY N+G GAGTSKRV W G+HVI
Sbjct: 424 WSAWDGEFALQTLYYGEYLNQGAGAGTSKRVKWSGYHVI 540
>gb|CV131876.1|CV131876 L4P01g01 Populus stem seasonal library Populus deltoides cDNA, mRNA
sequence
Length = 766
Score = 239 bits (516), Expect = 1e-062
Identities = 90/159 (56%), Positives = 114/159 (71%)
Frame = +1 / +1
Query: 85 CRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQQNSVTAH 264
CR DA+QDTLY H+ RQF+R+ I+GT+DFIFGN+A QNC +V R+PM Q+N VTA
Sbjct: 37 CRIDAYQDTLYTHSLRQFYRDSYITGTVDFIFGNAAVELQNCKLVPRKPMSGQKNMVTAQ 216
Query: 265 GRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFIKPEG 444
GRTDPN +G IQ C ++ L P + S+LG PWKE+SR V+M+S I D I P G
Sbjct: 217 GRTDPNQNTGTSIQKCDIIASSDLTPVKSSFKSFLGPPWKEYSRTVVMQSNIGDLIDPAG 396
Query: 445 YMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
+ W+G+F +KTLYY EY N+G GAGTSKRV W G+HVI
Sbjct: 397 WSAWDGEFALKTLYYGEYLNQGAGAGTSKRVKWSGYHVI 513
>gb|DN497639.1|DN497639 R020H03.5pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R020H03 5', mRNA sequence
Length = 820
Score = 222 bits (480), Expect(2) = 6e-062
Identities = 87/162 (53%), Positives = 110/162 (67%)
Frame = +1 / +3
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAGA +HQAVA+R DL+AFY C F+A+QDTLY H+ RQF+R C I GT+DFIFGN
Sbjct: 273 FRNTAGAVKHQAVAVRNGADLSAFYGCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGN 452
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A VFQNC + R PM Q N++TA GRTDPN +G I NC + L + +Y
Sbjct: 453 AAVVFQNCNLYPRLPMSGQFNAITAQGRTDPNQNTGTSIHNCTIRAADDLASSNTTVQTY 632
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYA 492
LGRPWK++SR V M+S + I P G+ W+GDF + T YYA
Sbjct: 633 LGRPWKQYSRTVYMQSFMDSLINPAGWQIWSGDFALNTSYYA 758
Score = 35.0 bits (70), Expect(2) = 6e-062
Identities = 11/15 (73%), Positives = 13/15 (86%)
Frame = +1 / +2
Query: 508 GPGAGTSKRVTWPGF 552
GPG+ T+ RVTWPGF
Sbjct: 776 GPGSNTTNRVTWPGF 820
>gb|CV273451.1|CV273451 WS01711.B21_A16 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS01711_A16 3', mRNA sequence
Length = 750
Score = 195 bits (421), Expect(2) = 1e-061
Identities = 77/150 (51%), Positives = 101/150 (67%)
Frame = +1 / -1
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG + QAVALR DL+ +Y C F +QDTL+VH++RQF+R C I GTIDFIFGN
Sbjct: 735 FSNTAGPLKGQAVALRSASDLSVYYRCSFQGYQDTLFVHSQRQFYRECYIYGTIDFIFGN 556
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+A VFQN +I+ RRP+ Q N +TA GR DP +G+ I N +++P L P +Y
Sbjct: 555 AAVVFQNSIILARRPLKGQANMITAQGRNDPFQNTGISIHNSQILPAPDLKPVAGAFETY 376
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPW 456
LGRPW +SR VI+++ I FI P G+ PW
Sbjct: 375 LGRPWMRYSRTVILQTYIDGFINPAGWSPW 286
Score = 61.1 bits (127), Expect(2) = 1e-061
Identities = 22/35 (62%), Positives = 24/35 (68%)
Frame = +1 / -1
Query: 457 NGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
N DF TLYY EY N GPG+ T +RV W GFHVI
Sbjct: 282 NSDFAQDTLYYGEYKNSGPGSSTRRRVAWKGFHVI 178
>gb|BI130406.1|BI130406 G105P21Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 494
Score = 235 bits (508), Expect = 2e-061
Identities = 89/163 (54%), Positives = 111/163 (68%)
Frame = +1 / +1
Query: 85 CRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQQNSVTAH 264
C F+A+QDTLY H+ RQF+R C I GT+DFIFGN+A VFQNC + R PM Q N++TA
Sbjct: 4 CSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQNCNLYPRLPMSGQFNAITAQ 183
Query: 265 GRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADFIKPEG 444
GRTDPN +G I NC + L + +YLGRPWK++SR V M+S + I P G
Sbjct: 184 GRTDPNQNTGTSIHNCTIRAADDLASSNTTVQTYLGRPWKQYSRTVYMQSFMDSLINPAG 363
Query: 445 YMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVIGRKD 573
+ W+GDF + T YYAEYNN GPG+ T+ RVTWPGFHVI D
Sbjct: 364 WQIWSGDFALNTSYYAEYNNSGPGSNTTNRVTWPGFHVINATD 492
Score = 69.8 bits (146), Expect(2) = 2e-022
Identities = 34/71 (47%), Positives = 40/71 (56%)
Frame = -1 / -1
Query: 575 ASFRPMTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTR 396
AS +TW PG VTL +V PGP LLYSA* V KSP P+G + +M L + T
Sbjct: 494 ASVALITWKPGHVTLFVVLEPGPELLYSA*YDVFSAKSPLHICQPAGFISESMKLCI*TV 315
Query: 395 RENSFQGRPRY 363
E F G PRY
Sbjct: 314 LEYCFHGLPRY 282
Score = 55.1 bits (114), Expect(2) = 2e-022
Identities = 31/76 (40%), Positives = 36/76 (47%)
Frame = -1 / -1
Query: 311 QFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNW 132
Q + P F GSV P AV +G R QFW T A LP +KS VP ++ N
Sbjct: 230 QLCIDVPVFWFGSVLPWAVMALN*PLIGSRGYKLQFWKTTAALPNIKSTVP*ISHSL*NC 51
Query: 131 RRACTYSVSWNASNRQ 84
R Y VSW AS Q
Sbjct: 50 LREWVYKVSWYASKLQ 3
>gb|CV268088.1|CV268088 WS0204.B21_I11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0204_I11 3', mRNA sequence
Length = 818
Score = 232 bits (500), Expect = 2e-060
Identities = 85/166 (51%), Positives = 118/166 (71%)
Frame = +1 / -3
Query: 64 DLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQ 243
DL+ ++ C ++QD+LY H RQF+R C +SGT+DFIFG++ AVFQNC I+ R+ + +Q
Sbjct: 816 DLSVYFRCEIKSYQDSLYTHTMRQFYRECRVSGTVDFIFGDATAVFQNCQILARKGLPDQ 637
Query: 244 QNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIA 423
+N+VTAHGR DPN +G Q C + D L P +YLGRPWK FSR +IM+S ++
Sbjct: 636 KNTVTAHGRKDPNQPTGYSFQFCNISADIDLLPYVNSSYTYLGRPWKNFSRTIIMQSYMS 457
Query: 424 DFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
+ I+PEG++ WNG+ + TLYY EY N GPGAG +RV WPGFH++
Sbjct: 456 NAIRPEGWLEWNGNVYLDTLYYGEYINYGPGAGVGRRVKWPGFHML 319
>gb|DT521175.1|DT521175 WS02033.B21_J12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02033_J12 3', mRNA sequence
Length = 821
Score = 232 bits (500), Expect = 2e-060
Identities = 85/166 (51%), Positives = 118/166 (71%)
Frame = +1 / -3
Query: 64 DLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQ 243
DL+ ++ C ++QD+LY H RQF+R C +SGT+DFIFG++ AVFQNC I+ R+ + +Q
Sbjct: 816 DLSVYFRCEIKSYQDSLYTHTMRQFYRECRVSGTVDFIFGDATAVFQNCQILARKGLPDQ 637
Query: 244 QNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIA 423
+N+VTAHGR DPN +G Q C + D L P +YLGRPWK FSR +IM+S ++
Sbjct: 636 KNTVTAHGRKDPNQPTGYSFQFCNISADIDLLPYVNSSYTYLGRPWKNFSRTIIMQSYMS 457
Query: 424 DFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
+ I+PEG++ WNG+ + TLYY EY N GPGAG +RV WPGFH++
Sbjct: 456 NAIRPEGWLEWNGNVYLDTLYYGEYINYGPGAGVGRRVKWPGFHML 319
>gb|DT482440.1|DT482440 WS02519.B21_N06 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02519_N06 3', mRNA sequence
Length = 851
Score = 230 bits (497), Expect = 5e-060
Identities = 88/164 (53%), Positives = 115/164 (70%)
Frame = +1 / -1
Query: 70 AAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTRRPMDNQQN 249
+AFY C A+QDTLYVH+ RQF+ +C+I G++DFIFGN+A VFQ+C I RRP Q+N
Sbjct: 815 SAFYRCDMIAYQDTLYVHSLRQFYVSCIIIGSVDFIFGNAAVVFQDCDIHARRPNPGQKN 636
Query: 250 SVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVIMESTIADF 429
VTA GR+DPN +G+VIQ CR+ Q L + SYLGRPWK +SR ++M++ I+D
Sbjct: 635 MVTAQGRSDPNENTGIVIQKCRIGATQDLLAAKSSFRSYLGRPWKLYSRTIVMQTEISDI 456
Query: 430 IKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
I P G+ W+GDF + TL Y EY N GPGA T+ RV W GF V+
Sbjct: 455 IDPAGWFEWDGDFALDTLVYREYQNTGPGANTANRVNWKGFKVV 324
Score = 103 bits (220), Expect(2) = 2e-030
Identities = 44/78 (56%), Positives = 49/78 (62%)
Frame = -1 / +1
Query: 308 FWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWR 129
FW+T P F LGS+RPCAVT F W +GRR M Q WNT A LP +KS P + QL NWR
Sbjct: 577 FWITMPVFSLGSLRPCAVTIFFWPGLGRRACMSQSWNTTAALPNIKSTEPIIMQLT*NWR 756
Query: 128 RACTYSVSWNASNRQL*N 75
CT VSW A L*N
Sbjct: 757 SECT*RVSWYAIMSHL*N 810
Score = 48.7 bits (100), Expect(2) = 2e-030
Identities = 28/74 (37%), Positives = 38/74 (51%)
Frame = -1 / +1
Query: 581 CSASFRPMTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMM 402
C++ T P Q TLL V APGP YS * +V KSP P+G + S + + +
Sbjct: 304 CTSIALVTTLKPFQFTLLAVLAPGPVF*YSL*TNVSRAKSPSHSNQPAGSIISLISVCIT 483
Query: 401 TRRENSFQGRPRYE 360
E +F G P+YE
Sbjct: 484 IVLEYNFHGLPKYE 525
>gb|DT500705.1|DT500705 PX0019.BR.1_L15 PT-X-FL-A-1 Populus trichocarpa cDNA clone
PX0019_L15 5', mRNA sequence
Length = 532
Score = 229 bits (494), Expect = 1e-059
Identities = 88/172 (51%), Positives = 113/172 (65%)
Frame = +1 / +3
Query: 46 ALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTR 225
ALRV D A Y C +QDTLYVH+ RQF+R C I GT+DFIFGN+A V QNC I R
Sbjct: 3 ALRVGADHAVVYRCSIIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQNCSIYAR 182
Query: 226 RPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVI 405
+PM +Q+N++TA R DPN +G+ I C+++ L P + P+YLGRPWK +SR V
Sbjct: 183 KPMASQKNTITAQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVY 362
Query: 406 MESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
M S + D I P G++ W+ F + TLYY EY N GPGA +RV WPG+ VI
Sbjct: 363 MLSFMGDHIHPRGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVI 518
Score = 116 bits (248), Expect = 1e-025
Identities = 67/153 (43%), Positives = 76/153 (49%)
Frame = -1 / -1
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
MT PG TL APGP +YS * V P G M S M +M T E SF
Sbjct: 517 MTRYPGHFTLCPTAAPGP*FMYSP*YKVSSANDASHSSHPLG*M*SPMNDNMYTVLEYSF 338
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
GRPRY G + G + Q W+ P F LGS+R AV F W ++G R M QF
Sbjct: 337 HGRPRYVGKVPFDGARSDAARILQAWIDMPVF*LGSLRFWAVMVFFWEAIGLRA*MLQFC 158
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSW 102
NT A LP MKS VP M+ NWR CT VSW
Sbjct: 157 NTTAALPNMKSTVP*MSHSL*NWRFECT*RVSW 59
>gb|DT500757.1|DT500757 PX0019.BR_B10 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_B10
5', mRNA sequence
Length = 642
Score = 229 bits (494), Expect = 1e-059
Identities = 88/172 (51%), Positives = 113/172 (65%)
Frame = +1 / +3
Query: 46 ALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTR 225
ALRV D A Y C +QDTLYVH+ RQF+R C I GT+DFIFGN+A V QNC I R
Sbjct: 3 ALRVGADHAVVYRCSIIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQNCSIYAR 182
Query: 226 RPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVI 405
+PM +Q+N++TA R DPN +G+ I C+++ L P + P+YLGRPWK +SR V
Sbjct: 183 KPMASQKNTITAQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVY 362
Query: 406 MESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
M S + D I P G++ W+ F + TLYY EY N GPGA +RV WPG+ VI
Sbjct: 363 MLSFMGDHIHPRGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVI 518
Score = 116 bits (248), Expect = 1e-025
Identities = 67/153 (43%), Positives = 76/153 (49%)
Frame = -1 / -3
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
MT PG TL APGP +YS * V P G M S M +M T E SF
Sbjct: 517 MTRYPGHFTLCPTAAPGP*FMYSP*YKVSSANDASHSSHPLG*M*SPMNDNMYTVLEYSF 338
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
GRPRY G + G + Q W+ P F LGS+R AV F W ++G R M QF
Sbjct: 337 HGRPRYVGKVPFDGARSDAARILQAWIDMPVF*LGSLRFWAVMVFFWEAIGLRA*MLQFC 158
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSW 102
NT A LP MKS VP M+ NWR CT VSW
Sbjct: 157 NTTAALPNMKSTVP*MSHSL*NWRFECT*RVSW 59
>gb|DT500764.1|DT500764 PX0019.BR_B18 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_B18
5', mRNA sequence
Length = 619
Score = 229 bits (494), Expect = 1e-059
Identities = 88/172 (51%), Positives = 113/172 (65%)
Frame = +1 / +3
Query: 46 ALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQNCLIVTR 225
ALRV D A Y C +QDTLYVH+ RQF+R C I GT+DFIFGN+A V QNC I R
Sbjct: 3 ALRVGADHAVVYRCSIIGYQDTLYVHSNRQFYRECDIYGTVDFIFGNAAVVLQNCSIYAR 182
Query: 226 RPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSYLGRPWKEFSRLVI 405
+PM +Q+N++TA R DPN +G+ I C+++ L P + P+YLGRPWK +SR V
Sbjct: 183 KPMASQKNTITAQNRKDPNQNTGISIHACKILAASDLAPSKGTFPTYLGRPWKLYSRTVY 362
Query: 406 MESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVTWPGFHVI 561
M S + D I P G++ W+ F + TLYY EY N GPGA +RV WPG+ VI
Sbjct: 363 MLSFMGDHIHPRGWLEWDASFALDTLYYGEYMNYGPGAAVGQRVKWPGYRVI 518
Score = 116 bits (248), Expect = 1e-025
Identities = 67/153 (43%), Positives = 76/153 (49%)
Frame = -1 / -1
Query: 560 MTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSF 381
MT PG TL APGP +YS * V P G M S M +M T E SF
Sbjct: 517 MTRYPGHFTLCPTAAPGP*FMYSP*YKVSSANDASHSSHPLG*M*SPMNDNMYTVLEYSF 338
Query: 380 QGRPRYEGILKRSGKSFWSGTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFW 201
GRPRY G + G + Q W+ P F LGS+R AV F W ++G R M QF
Sbjct: 337 HGRPRYVGKVPFDGARSDAARILQAWIDMPVF*LGSLRFWAVMVFFWEAIGLRA*MLQFC 158
Query: 200 NTAAELPKMKSMVPEMTQLRKNWRRACTYSVSW 102
NT A LP MKS VP M+ NWR CT VSW
Sbjct: 157 NTTAALPNMKSTVP*MSHSL*NWRFECT*RVSW 59
>gb|DN487860.1|DN487860 R010A03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R010A03 3', mRNA sequence
Length = 747
Score = 150 bits (323), Expect(2) = 2e-059
Identities = 59/100 (59%), Positives = 72/100 (72%)
Frame = +1 / -1
Query: 25 AERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGNSAAVFQ 204
A +HQAVAL D++AFY C DAFQDTLY HA RQF+R C I GT+DFIFGNSA V Q
Sbjct: 732 AIKHQAVALMSNADMSAFYRCSMDAFQDTLYAHANRQFYRECDIYGTVDFIFGNSAVVIQ 553
Query: 205 NCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVP 324
N I R+PM QN++TA G+ DPN +G+ IQNC ++P
Sbjct: 552 NSNIRPRKPMQGLQNTITAQGKIDPNQNTGISIQNCTVLP 433
Score = 98.2 bits (208), Expect(2) = 2e-059
Identities = 36/84 (42%), Positives = 49/84 (58%)
Frame = +1 / -1
Query: 337 FPDRFKIPSYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPG 516
F D + ++LGRPWK +S V M S + I P G++PW G+ T++Y+E+ N GPG
Sbjct: 432 FGDLSSVKTFLGRPWKNYSTTVFMRSMMGSLIDPAGWLPWTGNTAPPTIFYSEFENFGPG 253
Query: 517 AGTSKRVTWPGFHVIGRKDAEQFT 588
A T RV W G I K A +FT
Sbjct: 252 ASTKNRVKWKGLKTITSKQASKFT 181
Score = 75.3 bits (158), Expect(2) = 8e-022
Identities = 45/100 (45%), Positives = 48/100 (48%)
Frame = -1 / +2
Query: 323 GTRRQFWMTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQL 144
G QF + P F LGS+ PCAV FC MG M FW T AE PKMKS VP M+
Sbjct: 434 GKTVQF*IEIPVF*LGSILPCAVMVFCRPCMGFLGRMLLFWMTTAEFPKMKSTVP*MSHS 613
Query: 143 RKNWRRACTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSA 24
R N R AC VS AS L* A CL A
Sbjct: 614 R*NCRLACA*RVS*KASMLHL*KADMSAFDIKATA*CLIA 733
Score = 47.8 bits (98), Expect(2) = 8e-022
Identities = 29/74 (39%), Positives = 36/74 (48%)
Frame = -1 / +2
Query: 587 VNCSASFRPMTWNPGQVTLLLVPAPGPRLLYSA**SVLMPKSPFQGM*PSGLMKSAMVLS 408
VN A M + P +TL V APGP+ S * V P G P+G +K ++
Sbjct: 182 VNLLACLLVMVFKPFHLTLFFVEAPGPKFSNSE*KMVGGAVFPVHGNHPAGSIKLPIIER 361
Query: 407 MMTRRENSFQGRPR 366
M T E FQGRPR
Sbjct: 362 MNTVVE*FFQGRPR 403
>gb|CA928697.1|CA928697 MTU6TR.P5.G05 Aspen root cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 625
Score = 227 bits (490), Expect = 5e-059
Identities = 92/159 (57%), Positives = 113/159 (71%)
Frame = +1 / +2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F NTAG +HQAVALRV DL+AFY C A+QDTLYVH+ RQFF NC ++GT DFIFGN
Sbjct: 149 FENTAGPSKHQAVALRVGSDLSAFYECDMLAYQDTLYVHSNRQFFINCFVAGTADFIFGN 328
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRLVPDQKLFPDRFKIPSY 366
+AAVFQ+C I RRP Q+N VTA GRTDPN +G+VIQ R+ L P + P+Y
Sbjct: 329 AAAVFQDCDIHARRPDSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLLPVQSSFPTY 508
Query: 367 LGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTL 483
LGRPWKE+SR VIM+S+I D I+ + W+G F + TL
Sbjct: 509 LGRPWKEYSRTVIMQSSITDVIQTSRWHEWSGSFALSTL 625
Score = 118 bits (253), Expect = 2e-026
Identities = 71/159 (44%), Positives = 75/159 (47%)
Frame = -1 / -2
Query: 482 SVLMPKSPFQGM*PSGLMKSAMVLSMMTRRENSFQGRPRYEGILKRSGKSFWSGTRRQFW 303
+VL K P + S M MMT E SFQG PRY G L +G F
Sbjct: 624 NVLSAKLPLHSCHRLVCITSVMDDCMMTVLEYSFQGLPRYVGKLL*TGSKSEVAPILLF* 445
Query: 302 MTSPDFMLGSVRPCAVTEFCWLSMGRRVTMRQFWNTAAELPKMKSMVPEMTQLRKNWRRA 123
+T P F LGSV P AVT F W GRR M Q W TAA LPKMKS VP Q KN R
Sbjct: 444 ITMPVF*LGSVLPWAVTMFFWPESGRRAWMSQSWKTAAALPKMKSAVPATKQFMKN*RFE 265
Query: 122 CTYSVSWNASNRQL*NXXXXXXXXXXXAWCLSAPAVLWK 6
T VSW AS *N AWCL PAV K
Sbjct: 264 WT*RVSW*ASMSHS*NAERSDPTLNATAWCLEGPAVFSK 148
>gb|CV280481.1|CV280481 WS0136.B21_H05 PTxD-IL-FL-A-4 Populus trichocarpa x Populus
deltoides cDNA clone WS0136_H05 3', mRNA sequence
Length = 884
Score = 144 bits (309), Expect(2) = 2e-058
Identities = 58/104 (55%), Positives = 72/104 (69%)
Frame = +1 / -2
Query: 7 FHNTAGAERHQAVALRVQGDLAAFYNCRFDAFQDTLYVHARRQFFRNCVISGTIDFIFGN 186
F N+AG +HQAVALRV D A + C D +QDTLY ++RQF+R I GT+DFIFGN
Sbjct: 841 FVNSAGPSKHQAVALRVGSDRAVIFRCSLDGYQDTLYTLSKRQFYRETDIYGTVDFIFGN 662
Query: 187 SAAVFQNCLIVTRRPMDNQQNSVTAHGRTDPNMKSGLVIQNCRL 318
SA VFQNC I R P Q+N VTA GRT P+ +G+ IQNC++
Sbjct: 661 SAVVFQNCNIFARNPGTGQKNFVTAQGRTSPDQNTGISIQNCQI 530
Score = 101 bits (215), Expect(2) = 2e-058
Identities = 35/65 (53%), Positives = 47/65 (72%)
Frame = +1 / -2
Query: 361 SYLGRPWKEFSRLVIMESTIADFIKPEGYMPWNGDFGIKTLYYAEYNNRGPGAGTSKRVT 540
+YLGRPWK++SR VIM+S++ I P G+ PW G ++YY EY+N GPG+ TS RV
Sbjct: 514 TYLGRPWKQYSRTVIMQSSLDGSIDPAGWFPWAGGSSPSSIYYGEYSNSGPGSSTSGRVN 335
Query: 541 WPGFH 555
WPG+H
Sbjct: 334 WPGYH 320
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 195,428,653
Number of Sequences: 369679
Number of extensions: 2336991
Number of successful extensions: 38556
Number of sequences better than 1.0e-020: 190
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 7146591814
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)