TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 3062418.2.1
(851 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid lib... 254 1e-073
gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library... 263 1e-073
gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Popul... 253 2e-069
gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Popu... 253 2e-069
gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus... 253 2e-069
gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated wit... 222 7e-067
gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Popu... 102 9e-055
gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA librar... 196 3e-052
gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus t... 100 3e-051
gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Po... 166 8e-051
gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus t... 102 2e-049
gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus t... 102 2e-049
gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Popul... 137 1e-047
gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA librar... 141 2e-046
gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDN... 146 5e-046
gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Popul... 169 2e-045
gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus t... 169 2e-045
gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA libr... 100 5e-045
gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library... 139 8e-043
gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated wi... 164 9e-043
gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populu... 97 7e-042
gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal libr... 100 4e-040
gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA librar... 97 4e-039
gb|CK097994.1|CK097994 A001P37.5pR Hybrid aspen plasmid lib... 93 4e-038
gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated wit... 80 4e-035
gb|CN519340.1|CN519340 GQ0102.B3_M07 GQ010 Populus trichoca... 112 6e-035
gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDN... 63 3e-034
gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Po... 111 7e-034
gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Po... 142 3e-033
gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA li... 63 6e-033
gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDN... 68 1e-030
gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Po... 100 1e-030
gb|CX657290.1|CX657290 PO02039B10 Poplar SC cDNA library Po... 101 2e-029
gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichoca... 80 3e-028
gb|CF230144.1|CF230144 PtaC0004D11E0909 Poplar cDNA library... 71 1e-027
gb|BP932598.1|BP932598 BP932598 full-length enriched poplar... 77 1e-026
gb|CV274297.1|CV274297 WS0172.B21_N05 PTxD-NR-A-8 Populus t... 68 2e-026
gb|BU880689.1|BU880689 UM53TC06 Populus flower cDNA library... 102 2e-026
gb|CF119227.1|CF119227 MTU10CS.P15.B06 Aspen stem cDNA Libr... 102 4e-026
gb|CA934390.1|CA934390 MTU3TS.P7.A06 Aspen stem cDNA Librar... 100 1e-025
gb|BI130255.1|BI130255 G102P91Y Populus cambium cDNA librar... 70 3e-025
gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus tricho... 100 7e-025
gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated wit... 104 7e-025
gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus t... 97 1e-024
gb|CX658670.1|CX658670 PO01020G08 Poplar SC cDNA library Po... 79 2e-024
gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leave... 77 3e-024
gb|BU896443.1|BU896443 X040G03 Populus wood cDNA library Po... 82 6e-024
gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins c... 68 1e-023
gb|CK107403.1|CK107403 UB56BPD10.5pR Populus active cambium... 96 4e-023
gb|CK097608.1|CK097608 UB56BPD10.3pR Populus active cambium... 96 4e-023
gb|BU823778.1|BU823778 UB56BPD10 Populus tremula cambium cD... 96 4e-023
gb|CK092448.1|CK092448 G084P08.3pR Populus tension wood cDN... 107 8e-023
gb|CX659990.1|CX659990 PO01016F08 Poplar SC cDNA library Po... 70 9e-022
gb|CX654964.1|CX654964 PO01003C04 Poplar SC cDNA library Po... 70 9e-022
gb|CX657957.1|CX657957 PO01007D11 Poplar SC cDNA library Po... 70 9e-022
gb|CX658849.1|CX658849 PO01023B01 Poplar SC cDNA library Po... 70 9e-022
gb|CA927840.1|CA927840 MTU6TR.P13.E11 Aspen root cDNA Libra... 103 1e-021
gb|BU835778.1|BU835778 T078E10 Populus apical shoot cDNA li... 79 6e-021
>gb|CK087245.1|CK087245 A001P37.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 3', mRNA sequence
Length = 816
Score = 254 bits (550), Expect(3) = 1e-073
Identities = 97/168 (57%), Positives = 123/168 (73%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E+ K+VKGS D++GIN YT Y+ + K Y DW + ++ G IGP
Sbjct: 656 PKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGP 477
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGNLTR + L DTTR+ +YK
Sbjct: 476 RANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKALQDTTRIGYYKA 297
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL++L+KA DDGA++ GYFAWSLLDNFEW+ GYTS+FGIVYVD+S K
Sbjct: 296 YLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLK 153
Score = 120 bits (257), Expect(2) = 3e-029
Identities = 64/110 (58%), Positives = 69/110 (62%)
Frame = -1 / +1
Query: 614 ST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRV 435
ST TIPNL+V*P+ HSKLS DQAK P APSS AF S +* L* LVVSC RV
Sbjct: 169 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*AL**PILVVSCNALERV 348
Query: 434 KFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
+ PG SIPFS VGFP T YIP GT+*S EFA GPI PF
Sbjct: 349 RLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTPF 498
Score = 32.2 bits (64), Expect(3) = 1e-073
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3 / -2
Query: 6 QPKTKQRLKEQGISMLVGLLIH*INGHYPQIMQDIVKERLPQ 131
Q T +LKEQ I + + + G YP+ MQ+IV RLP+
Sbjct: 776 QKLTT*QLKEQEIFHVGWFIHPIVYGEYPKTMQNIVGSRLPK 651
Score = 29.5 bits (58), Expect(3) = 1e-073
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SA WF+ +L+++
Sbjct: 158 LKRYPKMSANWFKHLLERN 102
Score = 28.1 bits (55), Expect(2) = 3e-029
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1 / +1
Query: 188 LIPM*SAEPLTNLACSGVNLGQPL 117
LIP S EP T L S VNLG L
Sbjct: 595 LIPTKSIEPFTILTSSSVNLGSLL 666
>gb|BU880315.1|BU880315 UM44TC09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 617
Score = 263 bits (569), Expect(2) = 1e-073
Identities = 99/168 (58%), Positives = 128/168 (76%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
P+FT ++ K+VKGS D++GINQYT Y+ + K Y DW V + ++NG PIGP
Sbjct: 30 PQFTKKKVKMVKGSMDFVGINQYTTFYMYDPHQPKPKYLGYQQDWNVGFAYKKNGVPIGP 209
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGN TR + LHDTTRV ++K
Sbjct: 210 RANSNWLYNVPWGMYKAVMYIKERYGNPTIILSENGMDDPGNFTRSKALHDTTRVGYFKA 389
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL +L+KA D+GA++AGYFAWSLLDNFEW+SGYTS+FGIVYVD++ K
Sbjct: 390 YLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTNLK 533
Score = 134 bits (288), Expect = 6e-031
Identities = 68/110 (61%), Positives = 73/110 (66%)
Frame = -1 / -2
Query: 614 ST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRV 435
ST T+PNL+V*PD HSKLS D AK*PA APSS AF S +* L TLVVSC + RV
Sbjct: 517 STYTMPNLEV*PDLHSKLSSNDHAK*PAKLAPSSAAFFS*VK*ALK*PTLVVSCNAFERV 338
Query: 434 KFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
K PG SIPFS VGFP F T YIP GT+*S EFA GPIG PF
Sbjct: 337 KLPGSSIPFSDSIIVGFP*RSFMYITALYIPHGTL*SQLEFALGPIGTPF 188
Score = 33.6 bits (67), Expect(2) = 1e-073
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF+ +L+++
Sbjct: 528 LKRYPKMSAYWFKKLLERN 584
>gb|DT508271.1|DT508271 WS02420.BR_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 5', mRNA sequence
Length = 673
Score = 253 bits (548), Expect(2) = 2e-069
Identities = 96/168 (57%), Positives = 123/168 (73%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E+ K+VKGS D++GIN YT Y+ + K Y DW + ++ G IGP
Sbjct: 17 PKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGP 196
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGNLTR + + DTTR+ +YK
Sbjct: 197 RANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKAMQDTTRIGYYKA 376
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL++L+KA DDGA++ GYFAWSLLDNFEW+ GYTS+FGIVYVD+S K
Sbjct: 377 YLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLK 520
Score = 119 bits (254), Expect(2) = 8e-029
Identities = 64/110 (58%), Positives = 69/110 (62%)
Frame = -1 / -2
Query: 614 ST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRV 435
ST TIPNL+V*P+ HSKLS DQAK P APSS AF S +* L* LVVSC RV
Sbjct: 504 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*AL**PILVVSCIALERV 325
Query: 434 KFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
+ PG SIPFS VGFP T YIP GT+*S EFA GPI PF
Sbjct: 324 RLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTPF 175
Score = 29.5 bits (58), Expect(2) = 2e-069
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SA WF+ +L+++
Sbjct: 515 LKRYPKMSANWFKHLLERN 571
Score = 28.1 bits (55), Expect(2) = 8e-029
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1 / -2
Query: 188 LIPM*SAEPLTNLACSGVNLGQPL 117
LIP S EP T L S VNLG L
Sbjct: 78 LIPTKSIEPFTILTSSSVNLGSLL 7
>gb|DT512885.1|DT512885 WS02420.B21_I08 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02420_I08 3', mRNA sequence
Length = 673
Score = 253 bits (548), Expect(2) = 2e-069
Identities = 96/168 (57%), Positives = 123/168 (73%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E+ K+VKGS D++GIN YT Y+ + K Y DW + ++ G IGP
Sbjct: 657 PKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGP 478
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGNLTR + + DTTR+ +YK
Sbjct: 477 RANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKAMQDTTRIGYYKA 298
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL++L+KA DDGA++ GYFAWSLLDNFEW+ GYTS+FGIVYVD+S K
Sbjct: 297 YLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLK 154
Score = 119 bits (254), Expect(2) = 8e-029
Identities = 64/110 (58%), Positives = 69/110 (62%)
Frame = -1 / +2
Query: 614 ST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRV 435
ST TIPNL+V*P+ HSKLS DQAK P APSS AF S +* L* LVVSC RV
Sbjct: 170 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*AL**PILVVSCIALERV 349
Query: 434 KFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
+ PG SIPFS VGFP T YIP GT+*S EFA GPI PF
Sbjct: 350 RLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTPF 499
Score = 29.5 bits (58), Expect(2) = 2e-069
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SA WF+ +L+++
Sbjct: 159 LKRYPKMSANWFKHLLERN 103
Score = 28.1 bits (55), Expect(2) = 8e-029
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1 / +2
Query: 188 LIPM*SAEPLTNLACSGVNLGQPL 117
LIP S EP T L S VNLG L
Sbjct: 596 LIPTKSIEPFTILTSSSVNLGSLL 667
>gb|CV254083.1|CV254083 WS0223.B21_P11 PTxD-ICC-A-12 Populus trichocarpa x Populus
deltoides cDNA clone WS0223_P11 3', mRNA sequence
Length = 667
Score = 253 bits (548), Expect(2) = 2e-069
Identities = 96/168 (57%), Positives = 123/168 (73%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E+ K+VKGS D++GIN YT Y+ + K Y DW + ++ G IGP
Sbjct: 654 PKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGP 475
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGNLTR + + DTTR+ +YK
Sbjct: 474 RANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKAMQDTTRIGYYKA 295
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YL++L+KA DDGA++ GYFAWSLLDNFEW+ GYTS+FGIVYVD+S K
Sbjct: 294 YLSQLKKAADDGANLVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLK 151
Score = 119 bits (254), Expect(2) = 8e-029
Identities = 64/110 (58%), Positives = 69/110 (62%)
Frame = -1 / +2
Query: 614 ST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRV 435
ST TIPNL+V*P+ HSKLS DQAK P APSS AF S +* L* LVVSC RV
Sbjct: 167 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*AL**PILVVSCIALERV 346
Query: 434 KFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
+ PG SIPFS VGFP T YIP GT+*S EFA GPI PF
Sbjct: 347 RLPGSSIPFSDSIIVGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTPF 496
Score = 29.5 bits (58), Expect(2) = 2e-069
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SA WF+ +L+++
Sbjct: 156 LKRYPKMSANWFKHLLERN 100
Score = 28.1 bits (55), Expect(2) = 8e-029
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = -1 / +2
Query: 188 LIPM*SAEPLTNLACSGVNLGQPL 117
LIP S EP T L S VNLG L
Sbjct: 593 LIPTKSIEPFTILTSSSVNLGSLL 664
>gb|CX174034.1|CX174034 A08_69-64_02.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 643
Score = 222 bits (479), Expect(3) = 7e-067
Identities = 83/149 (55%), Positives = 107/149 (71%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E+ K+VKGS D++GIN YT Y+ + K Y DW + ++ G IGP
Sbjct: 197 PKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGP 376
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKG 486
+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGNLTR + + DTTR+ +YK
Sbjct: 377 RANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKAMQDTTRIGYYKA 556
Query: 487 YLAELRKAIDDGADVAGYFAWSLLDNFEW 573
YL++L+KA DDGA++ GYFAWSLLDNFEW
Sbjct: 557 YLSQLKKAADDGANMVGYFAWSLLDNFEW 643
Score = 98.7 bits (209), Expect(3) = 2e-022
Identities = 54/96 (56%), Positives = 57/96 (59%)
Frame = -1 / -2
Query: 572 HSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRVKFPG*SIPFSVMKT 393
HSKLS DQAK P APSS AF S +* L* LVVSC RV+ PG SIPFS
Sbjct: 642 HSKLSSNDQAKYPTILAPSSAAFFS*DK*AL**PILVVSCIALERVRLPGSSIPFSDSII 463
Query: 392 VGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
VGFP T YIP GT+*S EFA GPI PF
Sbjct: 462 VGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTPF 355
Score = 43.2 bits (88), Expect(3) = 7e-067
Identities = 16/23 (69%), Positives = 17/23 (73%)
Frame = +2 / +2
Query: 5 STEDQAAAQRARDFHVGWFADPL 73
S D AAQRARDFHVGWF P+
Sbjct: 77 SKADNLAAQRARDFHVGWFIHPI 145
Score = 28.1 bits (55), Expect(3) = 7e-067
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLPQ 131
+ G YP+ MQ+IV RLP+
Sbjct: 146 VYGEYPKTMQNIVGSRLPK 202
Score = 26.3 bits (51), Expect(3) = 2e-022
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = -2 / -1
Query: 67 ISKPTNMEIPCSLS 26
++KP+NM+I CSLS
Sbjct: 139 MNKPSNMKISCSLS 98
Score = 21.7 bits (41), Expect(3) = 2e-022
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -2 / -2
Query: 130 WGSLSFTISCIICG*CPF 77
+GSL TI CI+ G P+
Sbjct: 201 FGSLLPTIFCIVFGYSPY 148
>gb|DT514016.1|DT514016 WS02423.B21_K04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02423_K04 3', mRNA sequence
Length = 910
Score = 102 bits (218), Expect(4) = 9e-055
Identities = 39/98 (39%), Positives = 60/98 (61%)
Frame = +1 / -3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E +L++ D++G+N YT+ ++ ++ Y A + V G+PIG
Sbjct: 731 PKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQLMERRVEFEGGEPIGE 552
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
+A S+WLY+ P G+ +NYL KY NPT+++TENGMD
Sbjct: 551 KAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 438
Score = 99.6 bits (211), Expect(4) = 9e-055
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +1 / -3
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA + +AI DG V GYFAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 410 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 237
Score = 36.3 bits (73), Expect(4) = 9e-055
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2 / -3
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
N TED+ AA R +F +GW+ +PL
Sbjct: 854 NKTEDKVAASRRLEFQLGWYLNPL 783
Score = 32.2 bits (64), Expect(4) = 9e-055
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 227 LSRHPKSSAYWFMRFLK 177
>gb|BU888888.1|BU888888 P013G12 Populus petioles cDNA library Populus tremula cDNA 5 prime,
mRNA sequence
Length = 476
Score = 196 bits (423), Expect(2) = 3e-052
Identities = 75/111 (67%), Positives = 91/111 (81%)
Frame = +1 / +1
Query: 298 IGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQF 477
IGP+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGNLTR + L DTTR+ +
Sbjct: 4 IGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDPGNLTRSKALQDTTRIGY 183
Query: 478 YKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YK YL++L+KA DGA++ GYFAWSLLDNFEW SGYTS+FGIVYVD+S K
Sbjct: 184 YKAYLSQLKKAAVDGANLVGYFAWSLLDNFEWTSGYTSRFGIVYVDYSNLK 336
Score = 114 bits (244), Expect = 7e-025
Identities = 61/106 (57%), Positives = 67/106 (63%)
Frame = -1 / -1
Query: 614 ST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRV 435
ST TIPNL+V*PD HSKLS DQAK P APS+ AF S +* L* LVVSC RV
Sbjct: 320 STYTIPNLEV*PDVHSKLSSNDQAKYPTKLAPSTAAFFS*DK*AL**PILVVSCNALERV 141
Query: 434 KFPG*SIPFSVMKTVGFPYLCFR*FTQPYIPSGTM*SHFEFACGPI 297
+ PG SIPFS VGFP T Y+P GT+*S EFA GPI
Sbjct: 140 RLPGSSIPFSDSIIVGFP*RSLMYITALYMPHGTL*SQ*EFALGPI 3
Score = 29.5 bits (58), Expect(2) = 3e-052
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SA WF+ +L+++
Sbjct: 331 LKRYPKMSANWFKHLLERN 387
>gb|CV271153.1|CV271153 WS0153.B21_O23 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0153_O23 3', mRNA sequence
Length = 914
Score = 99.6 bits (211), Expect(4) = 3e-051
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +1 / -1
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA + +AI DG V GYFAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 524 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 351
Score = 98.7 bits (209), Expect(4) = 3e-051
Identities = 37/98 (37%), Positives = 59/98 (60%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
P+FT E +L++ D++G+N YT+ ++ ++ Y A + G+PIG
Sbjct: 845 PQFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQSMERRAEFEGGEPIGE 666
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
+A S+WLY+ P G+ +NYL KY NPT+++TENGMD
Sbjct: 665 KAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 552
Score = 31.8 bits (63), Expect(4) = 3e-051
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 341 LARHPKSSAYWFMRFLK 291
Score = 29.0 bits (57), Expect(4) = 3e-051
Identities = 9/17 (52%), Positives = 15/17 (88%)
Frame = +3 / -1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP++M++I+ E+LPQ
Sbjct: 890 GDYPEVMREILGEQLPQ 840
>gb|BU883902.1|BU883902 R003A05 Populus root cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 484
Score = 166 bits (357), Expect(3) = 8e-051
Identities = 63/114 (55%), Positives = 80/114 (70%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
P+FT E+ K+VKGS D++GINQYT Y+ + K Y DW V + ++NG PIGP
Sbjct: 143 PQFTKEEVKMVKGSMDFVGINQYTTFYMYDPHQPKPKYLGYQQDWNVGFAYKKNGVPIGP 322
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTR 468
+ NS WLY VP GMY V Y+K +YGNPT+ ++ENGMD PGNLTR + LHDTTR
Sbjct: 323 RENSNWLYNVPWGMYKAVMYIKERYGNPTIILSENGMDDPGNLTRSKALHDTTR 484
Score = 43.2 bits (88), Expect(3) = 8e-051
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
+S D AAQRARDFH+GWF P+
Sbjct: 20 SSKADNLAAQRARDFHIGWFIHPI 91
Score = 29.9 bits (59), Expect(3) = 8e-051
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLPQ 131
+ G YP+ MQ+IV RLPQ
Sbjct: 92 VYGEYPKTMQNIVGNRLPQ 148
>gb|CV276879.1|CV276879 WS0142.B21_A18 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_A18 3', mRNA sequence
Length = 916
Score = 102 bits (218), Expect(3) = 2e-049
Identities = 39/98 (39%), Positives = 60/98 (61%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E +L++ D++G+N YT+ ++ ++ Y A + V G+PIG
Sbjct: 900 PKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQLMERRVEFEGGEPIGE 721
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
+A S+WLY+ P G+ +NYL KY NPT+++TENGMD
Sbjct: 720 KAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 607
Score = 99.6 bits (211), Expect(3) = 2e-049
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +1 / -2
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA + +AI DG V GYFAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 579 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 406
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 396 LSRHPKSSAYWFMRFLK 346
>gb|CV276936.1|CV276936 WS0142.B21_D09 PTxD-IL-A-5 Populus trichocarpa x Populus deltoides
cDNA clone WS0142_D09 3', mRNA sequence
Length = 885
Score = 102 bits (218), Expect(3) = 2e-049
Identities = 39/98 (39%), Positives = 60/98 (61%)
Frame = +1 / -3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E +L++ D++G+N YT+ ++ ++ Y A + V G+PIG
Sbjct: 877 PKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQLMERRVEFEGGEPIGE 698
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
+A S+WLY+ P G+ +NYL KY NPT+++TENGMD
Sbjct: 697 KAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 584
Score = 99.6 bits (211), Expect(3) = 2e-049
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +1 / -3
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA + +AI DG V GYFAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 556 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 383
Score = 32.2 bits (64), Expect(3) = 2e-049
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / -3
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 373 LSRHPKSSAYWFMRFLK 323
>gb|DT522014.1|DT522014 WS02035.B21_N05 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02035_N05 3', mRNA sequence
Length = 894
Score = 137 bits (294), Expect(3) = 1e-047
Identities = 50/74 (67%), Positives = 64/74 (86%)
Frame = +1 / -3
Query: 409 NGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYT 588
+GMD PGN TR + LHDTTR+ ++K YL +L+KA D+GA++AGYFAWSLLDNFEW+SGYT
Sbjct: 373 SGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGANLAGYFAWSLLDNFEWRSGYT 194
Query: 589 SKFGIVYVDFSTPK 630
S+FGIVYVD++ K
Sbjct: 193 SRFGIVYVDYTNLK 152
Score = 57.9 bits (120), Expect(3) = 1e-047
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1 / -1
Query: 322 WLYIVPEGMYGCVNYLKHKYGNPTVFITENGM 417
WLY VP GMY V Y+K +YGNPT+ ++ENGM
Sbjct: 585 WLYNVPWGMYKAVMYIKERYGNPTIILSENGM 490
Score = 33.6 bits (67), Expect(3) = 1e-047
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF+ +L+++
Sbjct: 157 LKRYPKMSAYWFKKLLERN 101
>gb|BI128960.1|BI128960 G084P08Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 399
Score = 141 bits (302), Expect(2) = 2e-046
Identities = 53/75 (70%), Positives = 64/75 (85%)
Frame = +1 / +3
Query: 406 ENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGY 585
ENGMD PGNLTR + L DTTR+ +YK YL++L+KA DDGA++ GYFAWSLLDNFEW+ GY
Sbjct: 171 ENGMDDPGNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVGYFAWSLLDNFEWRLGY 350
Query: 586 TSKFGIVYVDFSTPK 630
TS+FGIVYVD+S K
Sbjct: 351 TSRFGIVYVDYSNLK 395
Score = 84.9 bits (179), Expect(2) = 8e-023
Identities = 44/70 (62%), Positives = 48/70 (68%)
Frame = -1 / -3
Query: 614 ST*TIPNLDV*PDCHSKLSRRDQAK*PATSAPSSMAFLSSAR*PL*NCTLVVSCRYWPRV 435
ST TIPNL+V*P+ HSKLS DQAK P APSS AF S +* L* LVVSC RV
Sbjct: 379 STYTIPNLEV*PNLHSKLSSNDQAKYPTKLAPSSAAFFS*DK*AL**PILVVSCNALERV 200
Query: 434 KFPG*SIPFS 405
+ PG SIPFS
Sbjct: 199 RLPGSSIPFS 170
Score = 65.2 bits (136), Expect(2) = 2e-046
Identities = 24/42 (57%), Positives = 31/42 (73%)
Frame = +1 / +1
Query: 283 RNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITE 408
+ G IGP+ANS WLY VP GMY V Y+K +YGNPT+ ++E
Sbjct: 46 KKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSE 171
Score = 42.3 bits (86), Expect(2) = 8e-023
Identities = 20/36 (55%), Positives = 21/36 (58%)
Frame = -1 / -2
Query: 392 VGFPYLCFR*FTQPYIPSGTM*SHFEFACGPIGLPF 285
VGFP T YIP GT+*S EFA GPI PF
Sbjct: 155 VGFP*RSLMYITALYIPHGTL*SQ*EFALGPISTPF 48
>gb|CK102593.1|CK102593 G084P08.5pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G084P08 5', mRNA sequence
Length = 416
Score = 146 bits (314), Expect(2) = 5e-046
Identities = 54/97 (55%), Positives = 71/97 (73%)
Frame = +1 / +2
Query: 247 YSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQP 426
Y DW + ++ G IGP+ANS WLY VP GMY V Y+K +YGNPT+ ++ENGMD P
Sbjct: 11 YQQDWNAGFAYKKKGVEIGPRANSYWLYNVPWGMYKAVMYIKERYGNPTMILSENGMDDP 190
Query: 427 GNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAG 537
GNLTR + L DTTR+ +YK YL++L+KA DDGA++ G
Sbjct: 191 GNLTRSKALQDTTRIGYYKAYLSQLKKAADDGANLVG 301
Score = 58.3 bits (121), Expect(2) = 5e-046
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +1 / +1
Query: 535 GYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPKLERHPK 648
G F WSLLDNFEW+ GYTS+F TPKL+R+PK
Sbjct: 301 GTFDWSLLDNFEWRLGYTSRFANFMYVRYTPKLKRYPK 414
>gb|CV261973.1|CV261973 WS02018.B21_E17 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_E17 3', mRNA sequence
Length = 832
Score = 169 bits (364), Expect(2) = 2e-045
Identities = 61/94 (64%), Positives = 79/94 (84%)
Frame = +1 / -3
Query: 349 YGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGAD 528
Y V Y+K +YGNPT+ ++ENGMD PGN TR + LHDTTR+ ++K YL +L+KA D+GA+
Sbjct: 830 YKAVMYIKERYGNPTIILSENGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGAN 651
Query: 529 VAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
+AGYFAWSLLDNFEW+SGYTS+FGIVYVD++ K
Sbjct: 650 LAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTNLK 549
Score = 33.6 bits (67), Expect(2) = 2e-045
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +1 / -3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF+ +L+++
Sbjct: 554 LKRYPKMSAYWFKKLLERN 498
>gb|CV271536.1|CV271536 WS0154.B21_P15 PTxN-IB-A-6 Populus trichocarpa x Populus nigra cDNA
clone WS0154_P15 3', mRNA sequence
Length = 479
Score = 169 bits (364), Expect(2) = 2e-045
Identities = 61/94 (64%), Positives = 79/94 (84%)
Frame = +1 / -2
Query: 349 YGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGAD 528
Y V Y+K +YGNPT+ ++ENGMD PGN TR + LHDTTR+ ++K YL +L+KA D+GA+
Sbjct: 478 YKAVMYIKERYGNPTIILSENGMDDPGNFTRSKALHDTTRIGYFKAYLTQLKKAADEGAN 299
Query: 529 VAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
+AGYFAWSLLDNFEW+SGYTS+FGIVYVD++ K
Sbjct: 298 LAGYFAWSLLDNFEWRSGYTSRFGIVYVDYTNLK 197
Score = 33.6 bits (67), Expect(2) = 2e-045
Identities = 10/19 (52%), Positives = 17/19 (89%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SAYWF+ +L+++
Sbjct: 202 LKRYPKMSAYWFKKLLERN 146
>gb|CK090495.1|CK090495 F008P84.3pR Populus flower cDNA library Populus trichocarpa cDNA
clone F008P84 3', mRNA sequence
Length = 793
Score = 99.6 bits (211), Expect(3) = 5e-045
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +1 / -2
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA + +AI DG V GYFAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 504 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 331
Score = 88.1 bits (186), Expect(3) = 5e-045
Identities = 33/83 (39%), Positives = 51/83 (61%)
Frame = +1 / -2
Query: 172 DYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMY 351
D++G+N YT+ ++ ++ Y A + V G+PIG +A S+WLY+ P G+
Sbjct: 780 DFVGLNHYTSRFITHATESPEESYYYKAQLMERRVEFEGGEPIGEKAASEWLYVCPWGLR 601
Query: 352 GCVNYLKHKYGNPTVFITENGMD 420
+NYL KY NPT+++TENGMD
Sbjct: 600 KVLNYLAQKYNNPTIYVTENGMD 532
Score = 32.2 bits (64), Expect(3) = 5e-045
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 321 LSRHPKSSAYWFMRFLK 271
>gb|BU880599.1|BU880599 UM52TB12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 591
Score = 139 bits (298), Expect(3) = 8e-043
Identities = 52/101 (51%), Positives = 68/101 (67%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
P+FT E+ K+VKGS D++GINQYT Y+ + K Y DW V + ++NG PIGP
Sbjct: 287 PQFTKEEVKMVKGSMDFVGINQYTTFYMYDPHQPKPKYLGYQQDWNVGFAYKKNGVPIGP 466
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPG 429
+A S WLY VP GMY V Y+K +YGNPT+ ++ NGMD PG
Sbjct: 467 RATSNWLYNVPWGMYKAVMYIKERYGNPTIILSXNGMDDPG 589
Score = 43.2 bits (88), Expect(3) = 8e-043
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
+S D AAQRARDFH+GWF P+
Sbjct: 164 SSKADNLAAQRARDFHIGWFIHPI 235
Score = 29.9 bits (59), Expect(3) = 8e-043
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +2
Query: 75 INGHYPQIMQDIVKERLPQ 131
+ G YP+ MQ+IV RLPQ
Sbjct: 236 VYGEYPKTMQNIVGNRLPQ 292
>gb|CX174097.1|CX174097 D08_69-100_08.ab1 leaf inoculated with Marssonia pathogen of
Populus deltoides Populus deltoides cDNA, mRNA sequence
Length = 443
Score = 164 bits (353), Expect(2) = 9e-043
Identities = 60/91 (65%), Positives = 77/91 (84%)
Frame = +1 / +3
Query: 358 VNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAG 537
V Y+K +YGNPT+ ++ENGMD PGNLTR + + DTTR+ +YK YL++L+KA DDGA++ G
Sbjct: 12 VMYIKERYGNPTMILSENGMDDPGNLTRSKAMQDTTRIGYYKAYLSQLKKAADDGANMVG 191
Query: 538 YFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
YFAWSLLDNFEW+ GYTS+FGIVYVD+S K
Sbjct: 192 YFAWSLLDNFEWRLGYTSRFGIVYVDYSNLK 284
Score = 29.5 bits (58), Expect(2) = 9e-043
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SA WF+ +L+++
Sbjct: 279 LKRYPKMSANWFKHLLERN 335
>gb|CV258719.1|CV258719 WS0201.B21_F08 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS0201_F08 3', mRNA sequence
Length = 879
Score = 97.3 bits (206), Expect(3) = 7e-042
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1 / -1
Query: 415 MDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSK 594
++ G LT Q L+DT R+ +Y+ +L+ LR A+ +G V GYFAWS LD+FEW SGYT +
Sbjct: 516 VNNEGKLTLKQQLNDTMRIDYYRSHLSFLRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVR 337
Query: 595 FGIVYVDF 618
FGI+Y+D+
Sbjct: 336 FGIIYIDY 313
Score = 66.6 bits (139), Expect(3) = 7e-042
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1 / -1
Query: 280 ERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
+RNG IGPQA S WL++ P+G+ + Y K KY +P ++ITENG+ + N
Sbjct: 660 DRNGVLIGPQAGSTWLHVYPKGIRKLLLYTKKKYNDPVIYITENGVSEVNN 508
Score = 45.5 bits (93), Expect(3) = 7e-042
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVK 213
PKFT E++ +KGS D+IG+N YTA Y +
Sbjct: 813 PKFTKEESAFIKGSFDFIGLNYYTAFYAE 727
>gb|CV130609.1|CV130609 B9SP06h03 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 742
Score = 99.6 bits (211), Expect(3) = 4e-040
Identities = 36/58 (62%), Positives = 45/58 (77%)
Frame = +1 / +2
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA + +AI DG V GYFAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 272 EVLDDNLRVRYFKGYLASVAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 445
Score = 72.1 bits (151), Expect(3) = 4e-040
Identities = 25/44 (56%), Positives = 34/44 (77%)
Frame = +1 / +2
Query: 289 GKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
G+PIG +A S+WLY+ P G+ +NYL KY NPT+++TENGMD
Sbjct: 113 GEPIGEKAASEWLYVCPWGLRKVLNYLARKYNNPTIYVTENGMD 244
Score = 31.8 bits (63), Expect(3) = 4e-040
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +2
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 455 LARHPKSSAYWFMRFLK 505
>gb|DN488210.1|DN488210 R041F03.3pR Populus root cDNA library Populus tremula x Populus
tremuloides cDNA clone R041F03 3', mRNA sequence
Length = 842
Score = 96.8 bits (205), Expect(5) = 4e-039
Identities = 36/62 (58%), Positives = 46/62 (74%)
Frame = +1 / -1
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFST 624
++LHDT RV++ GYL L A+ GADV GYFAWS LDNFEW GYT +FG+ +VD++T
Sbjct: 344 EFLHDTGRVEYMSGYLDALLTAMKKGADVRGYFAWSFLDNFEWTFGYTRRFGLYHVDYTT 165
Query: 625 PK 630
K
Sbjct: 164 MK 159
Score = 53.3 bits (110), Expect(5) = 4e-039
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1 / -1
Query: 280 ERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
E++G PIG + W+++ GM V Y+K +Y N + ITENG Q N
Sbjct: 515 EKDGVPIGKPSEVDWIHVYSRGMEKMVTYVKERYNNIPMIITENGYSQVSN 363
Score = 32.2 bits (64), Expect(5) = 4e-039
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +2 / -1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NST ++ A +RA+ F + WF DP+
Sbjct: 797 NSTANKLAVERAQAFFLRWFLDPI 726
Score = 29.9 bits (59), Expect(5) = 4e-039
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVK 213
P+F+ ++ D+IG+N YT+ YV+
Sbjct: 674 PEFSRNDMNKLRKGLDFIGMNHYTSYYVQ 588
Score = 22.6 bits (43), Expect(5) = 4e-039
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = +1 / -2
Query: 622 TPKLERHPKASAYWFRDMLQKH 687
TP+ H SA W+++ + ++
Sbjct: 172 TPQ*SEHQDLSATWYKEFIARY 107
>gb|CK097994.1|CK097994 A001P37.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A001P37 5', mRNA sequence
Length = 528
Score = 93.2 bits (197), Expect(4) = 4e-038
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +1 / +3
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E+ K+VKGS D++GIN YT Y+ + K Y DW + ++ G IGP
Sbjct: 204 PKFTEEEVKMVKGSMDFVGINHYTTYYMYDPHQSKPKNLGYQQDWNAGFAYKKKGVEIGP 383
Query: 307 QANSKWLYIVPEGMY 351
+ANS WLY VP GMY
Sbjct: 384 RANSYWLYNVPWGMY 428
Score = 55.6 bits (115), Expect(4) = 4e-038
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = +1 / +1
Query: 358 VNYLKHKYGNPTVFITENGMDQPGNLTRGQ 447
V Y+K +YGNPT+ ++ENGMD PGNLTR +
Sbjct: 436 VMYIKERYGNPTMILSENGMDDPGNLTRSK 525
Score = 37.3 bits (75), Expect(4) = 4e-038
Identities = 14/18 (77%), Positives = 14/18 (77%)
Frame = +2 / +1
Query: 5 STEDQAAAQRARDFHVGW 58
S D AAQRARDFHVGW
Sbjct: 85 SKADNLAAQRARDFHVGW 138
Score = 28.1 bits (55), Expect(4) = 4e-038
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +3 / +3
Query: 75 INGHYPQIMQDIVKERLPQ 131
+ G YP+ MQ+IV RLP+
Sbjct: 153 VYGEYPKTMQNIVGSRLPK 209
>gb|CX175295.1|CX175295 C05_69-97_05.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 634
Score = 79.9 bits (168), Expect(5) = 4e-035
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1 / +2
Query: 247 YSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQP 426
Y+ D V E+NGK IGPQA S WLY+ P+G+ +NY K +Y NPT++ITENG+
Sbjct: 233 YATDSHVNLTGEKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRYRNPTIYITENGVSDF 412
Query: 427 GN 432
N
Sbjct: 413 NN 418
Score = 57.0 bits (118), Expect(5) = 4e-035
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1 / +2
Query: 499 LRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
LR + G V GYFAW+ D+FEW GYT +FG+ Y D+
Sbjct: 497 LRSIENYGTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDY 616
Score = 35.4 bits (71), Expect(5) = 4e-035
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPT 243
P FT ++ ++GS D +GIN Y A Y K + PT
Sbjct: 107 PNFTAQEILDLRGSYDILGINYYGAYYAKNLTHVDPDPT 223
Score = 24.9 bits (48), Expect(5) = 4e-035
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2 / +2
Query: 20 AAAQRARDFHVGWFADPL 73
A QR DF++GW P+
Sbjct: 2 ARGQRILDFNLGWHLSPI 55
Score = 24.0 bits (46), Expect(5) = 4e-035
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLP 128
G YP+ M+ +V +RLP
Sbjct: 62 GDYPRSMRSLVGDRLP 109
>gb|CN519340.1|CN519340 GQ0102.B3_M07 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0102_M07 5', mRNA sequence
Length = 620
Score = 112 bits (240), Expect(3) = 6e-035
Identities = 45/94 (47%), Positives = 60/94 (63%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
P+FT E+ K+VKGS D++GINQYT Y+ + K Y V + ++NG PIGP
Sbjct: 325 PQFTKEEVKMVKGSMDFVGINQYTTFYMYDPHQPKPKYLGYQQXXNVGFAYKKNGVPIGP 504
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITE 408
+ANS WLY V GMY V Y+K +YGNPT ++E
Sbjct: 505 RANSNWLYNVXWGMYXXVMYIKERYGNPTXILSE 606
Score = 43.2 bits (88), Expect(3) = 6e-035
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
+S D AAQRARDFH+GWF P+
Sbjct: 202 SSKADNLAAQRARDFHIGWFIHPI 273
Score = 29.9 bits (59), Expect(3) = 6e-035
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +3 / +1
Query: 75 INGHYPQIMQDIVKERLPQ 131
+ G YP+ MQ+IV RLPQ
Sbjct: 274 VYGEYPKTMQNIVGNRLPQ 330
>gb|DN498729.1|DN498729 S066G12.5pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 5', mRNA sequence
Length = 774
Score = 62.9 bits (131), Expect(5) = 3e-034
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1 / +3
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
QA S+WL+IVP G++ + Y+K KYGNP V ITENGMD
Sbjct: 489 QAASRWLHIVPWGIHKLLKYVKDKYGNPPVVITENGMD 602
Score = 48.7 bits (100), Expect(5) = 3e-034
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +1 / +3
Query: 517 DGADVAGYFAWSLLDNFEWQSG 582
D DV GYFAWSLLDN+EW SG
Sbjct: 708 DNCDVRGYFAWSLLDNWEWNSG 773
Score = 41.4 bits (84), Expect(5) = 3e-034
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
++ ED+ AAQRA DF +GWF DPL
Sbjct: 92 DAEEDKDAAQRAMDFGIGWFLDPL 163
Score = 40.0 bits (81), Expect(5) = 3e-034
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQK 222
P+ + +KL+ GS D++GIN YTA YV+ +
Sbjct: 215 PEISQGMSKLLVGSLDFVGINHYTALYVRNDR 310
Score = 29.0 bits (57), Expect(5) = 3e-034
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLPQVYSGAS 149
G YP M+ +V ERLP++ G S
Sbjct: 170 GKYPLSMKKLVGERLPEISQGMS 238
>gb|CX657346.1|CX657346 PO02042F10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02042F10 5', mRNA sequence
Length = 646
Score = 111 bits (237), Expect(3) = 7e-034
Identities = 44/112 (39%), Positives = 66/112 (58%)
Frame = +1 / +1
Query: 244 SYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQ 423
SY+ D +V E+NG PIG + W+Y+ P G+ + Y+K Y NP VFITENG+ +
Sbjct: 310 SYTDDRRVSQTTEKNGVPIGTPTDLNWVYVYPRGIQDVLLYIKDNYKNPPVFITENGIAE 489
Query: 424 PGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQS 579
+ T L D+ R+++ +L+ L KAI G +V Y+ WS LD+ EW +
Sbjct: 490 NASRTLAFALKDSWRIRYXSAHLSYLLKAIQKGGNVKAYYIWSFLDDSEWDA 645
Score = 48.3 bits (99), Expect(3) = 7e-034
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKL 225
PKFT EQ+ ++KGS D++G+N YTA+Y + L
Sbjct: 190 PKFTKEQSAMLKGSLDFLGLNYYTANYAESVPL 288
Score = 22.6 bits (43), Expect(3) = 7e-034
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3 / +1
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M+ +V RLP+
Sbjct: 145 GDYPDSMRTLVGNRLPK 195
>gb|CX654220.1|CX654220 PO02015A05 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02015A05 5', mRNA sequence
Length = 614
Score = 142 bits (305), Expect = 3e-033
Identities = 55/125 (44%), Positives = 79/125 (63%)
Frame = +1 / -2
Query: 244 SYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQ 423
SY+ D +V E+NG PIG + WLY+ P G+ + Y+K Y NP VFITENG+ +
Sbjct: 577 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNYKNPPVFITENGIAE 398
Query: 424 PGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGI 603
+ L D+ R++++ +L+ L KAI GA+V Y+ WS LD+FEW +GYT +FG+
Sbjct: 397 NASRPLAFALKDSWRIRYHSAHLSYLLKAIQKGANVKAYYIWSFLDDFEWDAGYTVRFGV 218
Query: 604 VYVDF 618
YVDF
Sbjct: 217 TYVDF 203
>gb|BU866443.1|BU866443 S066G12 Populus imbibed seed cDNA library Populus tremula cDNA 5
prime, mRNA sequence
Length = 745
Score = 62.9 bits (131), Expect(5) = 6e-033
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1 / +3
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
QA S+WL+IVP G++ + Y+K KYGNP V ITENGMD
Sbjct: 468 QAASRWLHIVPWGIHKLLKYVKDKYGNPPVVITENGMD 581
Score = 44.1 bits (90), Expect(5) = 6e-033
Identities = 15/19 (78%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 517 DGADVAGYFAWSLLDNFEW 573
D DV GYFAWSLLDN+EW
Sbjct: 687 DNCDVRGYFAWSLLDNWEW 743
Score = 41.4 bits (84), Expect(5) = 6e-033
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
++ ED+ AAQRA DF +GWF DPL
Sbjct: 71 DAEEDKDAAQRAMDFGIGWFLDPL 142
Score = 40.0 bits (81), Expect(5) = 6e-033
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQK 222
P+ + +KL+ GS D++GIN YTA YV+ +
Sbjct: 194 PEISQGMSKLLVGSLDFVGINHYTALYVRNDR 289
Score = 29.0 bits (57), Expect(5) = 6e-033
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLPQVYSGAS 149
G YP M+ +V ERLP++ G S
Sbjct: 149 GKYPLSMKKLVGERLPEISQGMS 217
>gb|DN488992.1|DN488992 S066G12.3pR Populus imbibed seed cDNA library Populus tremula cDNA
clone S066G12 3', mRNA sequence
Length = 824
Score = 67.5 bits (141), Expect(4) = 1e-030
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +1 / -3
Query: 517 DGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
D DV GYFAWSLLDN+EW SGYT +FG+ +VD+
Sbjct: 294 DNCDVRGYFAWSLLDNWEWNSGYTVRFGLYFVDY 193
Score = 62.9 bits (131), Expect(4) = 1e-030
Identities = 24/38 (63%), Positives = 30/38 (78%)
Frame = +1 / -3
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
QA S+WL+IVP G++ + Y+K KYGNP V ITENGMD
Sbjct: 513 QAASRWLHIVPWGIHKLLKYVKDKYGNPPVVITENGMD 400
Score = 37.3 bits (75), Expect(4) = 1e-030
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1 / -2
Query: 148 AKLVKGSADYIGINQYTASYVKGQK 222
+KL+ GS D++GIN YTA YV+ +
Sbjct: 766 SKLLVGSLDFVGINHYTALYVRNDR 692
Score = 25.8 bits (50), Expect(4) = 1e-030
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +1 / -3
Query: 631 LERHPKASAYWFRDMLQ 681
L R PKASA WF+ L+
Sbjct: 183 LTRVPKASAEWFKSTLR 133
>gb|BU816643.1|BU816643 N069F11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 668
Score = 100 bits (214), Expect(4) = 1e-030
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = +1 / +3
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA L +AI DG V GYFAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 138 EVLDDNLRVRYFKGYLASLAQAIKDGVQVKGYFAWSLLDNFEWAQGYTKRFGLVYVDY 311
Score = 31.8 bits (63), Expect(4) = 1e-030
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 321 LSRHPKSSAYWFLRFLK 371
Score = 30.4 bits (60), Expect(4) = 1e-030
Identities = 9/12 (75%), Positives = 12/12 (100%)
Frame = +1 / +3
Query: 385 NPTVFITENGMD 420
NPT+++TENGMD
Sbjct: 75 NPTIYVTENGMD 110
Score = 25.4 bits (49), Expect(4) = 1e-030
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1 / +2
Query: 325 LYIVPEGMYGCVNYLKHKY 381
LY+ P G+ +NYL KY
Sbjct: 14 LYVCPWGLRKVLNYLAQKY 70
>gb|CX657290.1|CX657290 PO02039B10 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO02039B10 5', mRNA sequence
Length = 628
Score = 101 bits (215), Expect(2) = 2e-029
Identities = 41/103 (39%), Positives = 61/103 (59%)
Frame = +1 / +1
Query: 244 SYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQ 423
SY+ D +V E+NG PIG + WLY+ P G+ + Y+K Y NP VFITENG+ +
Sbjct: 310 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNYKNPPVFITENGIAE 489
Query: 424 PGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWS 552
+ L D+ R++++ +L+ L KAI GA+V Y+ WS
Sbjct: 490 NASRPLAFALKDSWRIRYHSAHLSYLLKAIQKGANVKAYYIWS 618
Score = 48.3 bits (99), Expect(2) = 2e-029
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKL 225
PKFT EQ+ ++KGS D++G+N YTA+Y + L
Sbjct: 190 PKFTKEQSAMLKGSLDFLGLNYYTANYAESVPL 288
>gb|CN520293.1|CN520293 GQ0108.B3_O18 GQ010 Populus trichocarpa x Populus deltoides cDNA
clone GQ0108_O18 5', mRNA sequence
Length = 789
Score = 80.3 bits (169), Expect(3) = 3e-028
Identities = 31/62 (50%), Positives = 41/62 (66%)
Frame = +1 / -1
Query: 247 YSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQP 426
Y+ D V E+NGK IGPQA S WLY+ P+G+ +NY K +Y NPT++ITENG+
Sbjct: 735 YATDXHVNXTGEKNGKLIGPQAASPWLYVYPKGIRYLLNYTKDRYRNPTIYITENGVSDF 556
Query: 427 GN 432
N
Sbjct: 555 NN 550
Score = 57.0 bits (118), Expect(3) = 3e-028
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +1 / -1
Query: 499 LRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
LR + G V GYFAW+ D+FEW GYT +FG+ Y D+
Sbjct: 471 LRSIENYGTIVKGYFAWTFADDFEWPDGYTIRFGLYYTDY 352
Score = 25.8 bits (50), Expect(3) = 3e-028
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDMLQ 681
L R+PK S +WF + L+
Sbjct: 342 LHRYPKRSVHWFTNFLK 292
>gb|CF230144.1|CF230144 PtaC0004D11E0909 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 772
Score = 71.2 bits (149), Expect(3) = 1e-027
Identities = 26/47 (55%), Positives = 34/47 (72%)
Frame = +1 / +1
Query: 286 NGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQP 426
N KPIG +ANS WLY+VP+GM +N+++ K NP V +TENGM P
Sbjct: 601 NKKPIGDRANSIWLYVVPQGMRSLMNHIRQKXRNPPVILTENGMGDP 741
Score = 46.4 bits (95), Expect(3) = 1e-027
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLL 228
PKFT A LVKGS D++GIN YT Y + L
Sbjct: 424 PKFTENDAALVKGSLDFVGINHYTTFYARSNDSL 525
Score = 43.7 bits (89), Expect(3) = 1e-027
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +2 / +1
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NST+D AAQRA+DF +GWF +PL
Sbjct: 301 NSTKDIEAAQRAQDFQLGWFIEPL 372
>gb|BP932598.1|BP932598 BP932598 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-038_A02.r 3', mRNA sequence
Length = 644
Score = 76.7 bits (161), Expect(3) = 1e-026
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +1 / -2
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L D R+++ +L L KAI +GA+V GY+ W+ D+FEW +GYT +FG++Y+DF
Sbjct: 478 LKDGLRIRYLASHLQYLSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDF 311
Score = 56.1 bits (116), Expect(3) = 1e-026
Identities = 20/46 (43%), Positives = 29/46 (63%)
Frame = +1 / -2
Query: 295 PIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
PIG WL+I P+G+Y + Y++ KY NP ++ITENG+ N
Sbjct: 640 PIGTPTALNWLFIYPKGIYDLMLYVRDKYKNPPLYITENGLADANN 503
Score = 24.9 bits (48), Expect(3) = 1e-026
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDML 678
L+R+ K SAYWF+ L
Sbjct: 301 LKRYMKYSAYWFKMFL 254
>gb|CV274297.1|CV274297 WS0172.B21_N05 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0172_N05 3', mRNA sequence
Length = 878
Score = 68.4 bits (143), Expect(5) = 2e-026
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -2
Query: 499 LRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
LR + G DV G+FAWSL+DNFEW SGY +FG+ YVD+
Sbjct: 583 LRSINEHGVDVKGFFAWSLMDNFEWGSGYAVRFGLYYVDY 464
Score = 40.5 bits (82), Expect(5) = 2e-026
Identities = 14/23 (60%), Positives = 20/23 (86%)
Frame = +1 / -2
Query: 127 PKFTPEQAKLVKGSADYIGINQY 195
P+FT E++K++KGS D+IGIN Y
Sbjct: 760 PEFTAEESKMLKGSYDFIGINYY 692
Score = 34.1 bits (68), Expect(5) = 2e-026
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2 / -2
Query: 14 DQAAAQRARDFHVGWFADPL 73
DQ A +R+ DF +GWF DPL
Sbjct: 871 DQNATKRSLDFMLGWFMDPL 812
Score = 26.7 bits (52), Expect(5) = 2e-026
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +3 / -2
Query: 78 NGHYPQIMQDIVKERLPQ 131
NG YP+ M D V RLP+
Sbjct: 808 NGDYPRNMHDFVGGRLPE 755
Score = 26.3 bits (51), Expect(5) = 2e-026
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQK 684
L+R+PK S WF+ L++
Sbjct: 454 LKRYPKQSVKWFKQFLRR 401
>gb|BU880689.1|BU880689 UM53TC06 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 570
Score = 102 bits (218), Expect(2) = 2e-026
Identities = 39/98 (39%), Positives = 60/98 (61%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E +L++ D++G+N YT+ ++ ++ Y A + V G+PIG
Sbjct: 227 PKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQLMERRVEFEGGEPIGE 406
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
+A S+WLY+ P G+ +NYL KY NPT+++TENGMD
Sbjct: 407 KAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 520
Score = 36.3 bits (73), Expect(2) = 2e-026
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
N TED+ AA R +F +GW+ +PL
Sbjct: 104 NKTEDKVAASRRLEFQLGWYLNPL 175
>gb|CF119227.1|CF119227 MTU10CS.P15.B06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 462
Score = 102 bits (218), Expect(2) = 4e-026
Identities = 39/98 (39%), Positives = 60/98 (61%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E +L++ D++G+N YT+ ++ ++ Y A + V G+PIG
Sbjct: 399 PKFTEEDKELLRNPMDFVGLNHYTSRFITHATESPEESYYYKAQLMERKVEFEGGEPIGE 220
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
+A S+WLY+ P G+ +NYL KY NPT+++TENGMD
Sbjct: 219 KAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTENGMD 106
Score = 35.4 bits (71), Expect(2) = 4e-026
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1 / -1
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDG 522
+ L D RV+++KGYLA + +AI DG
Sbjct: 78 EVLDDNLRVRYFKGYLASVAQAIKDG 1
>gb|CA934390.1|CA934390 MTU3TS.P7.A06 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 462
Score = 100 bits (214), Expect(2) = 1e-025
Identities = 38/98 (38%), Positives = 61/98 (62%)
Frame = +1 / -1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGP 306
PKFT E +L++ D++G+N+YT+ ++ ++ Y A + V G+PIG
Sbjct: 399 PKFTEEDKELLRNPMDFVGLNRYTSRFITHATESPEESYYYKAQSMERKVKFEGGEPIGE 220
Query: 307 QANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMD 420
+A S+WLY+ P G+ +NYL KY NPT+++TE+GMD
Sbjct: 219 KAASEWLYVCPWGLRKVLNYLAQKYNNPTIYVTEDGMD 106
Score = 35.4 bits (71), Expect(2) = 1e-025
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1 / -1
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDG 522
+ L D RV+++KGYLA + +AI DG
Sbjct: 78 EVLDDNLRVRYFKGYLASVAQAIKDG 1
>gb|BI130255.1|BI130255 G102P91Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 485
Score = 69.8 bits (146), Expect(3) = 3e-025
Identities = 26/43 (60%), Positives = 31/43 (72%)
Frame = +1 / +1
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEW 573
++LHDT RV++ GYL L A+ GADV GYFAWS LDN EW
Sbjct: 349 EFLHDTGRVEYMSGYLDALLTAMKKGADVRGYFAWSFLDNLEW 477
Score = 53.3 bits (110), Expect(3) = 3e-025
Identities = 20/51 (39%), Positives = 29/51 (56%)
Frame = +1 / +1
Query: 280 ERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
E++G PIG + W+++ GM V Y+K +Y N + ITENG Q N
Sbjct: 178 EKDGVPIGKPSEVDWIHVYSRGMEKMVTYVKERYNNIPMIITENGYSQVSN 330
Score = 29.9 bits (59), Expect(3) = 3e-025
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1 / +1
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVK 213
P+F+ ++ D+IG+N YT+ YV+
Sbjct: 19 PEFSRNDMNKLRKGLDFIGMNHYTSYYVQ 105
>gb|CN523249.1|CN523249 GQ015M01.B3_E15 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M01_E15 5', mRNA sequence
Length = 727
Score = 100 bits (212), Expect(2) = 7e-025
Identities = 42/77 (54%), Positives = 50/77 (64%)
Frame = +1 / -2
Query: 430 NLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVY 609
N+T L D RV++ YL L A+ GADV GYFAWSLLDNFEW SGYT +FG+ +
Sbjct: 561 NVTTKAVLKDVQRVEYMSSYLDALETAVRKGADVRGYFAWSLLDNFEWTSGYTIRFGLYH 382
Query: 610 VDFSTPKLERHPKASAY 660
VDFST K R A+ Y
Sbjct: 381 VDFSTLKRTRKLSATWY 331
Score = 34.1 bits (68), Expect(2) = 7e-025
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1 / -2
Query: 280 ERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNL 435
+++ IG L +GM V Y K +Y N ++ITENG + N+
Sbjct: 717 QKDXXXIGQXTAXDXLXXXXQGMEKLVTYXKDRYNNIPMYITENGYCEEENV 562
>gb|CX174556.1|CX174556 D10_69-87_08.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 337
Score = 104 bits (222), Expect(2) = 7e-025
Identities = 38/55 (69%), Positives = 48/55 (87%)
Frame = +1 / +3
Query: 466 RVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDFSTPK 630
R+ +YK YL++L+KA DDGA++ GYFAWSLLDNFEW+ GYTS+FGIVYVD+S K
Sbjct: 12 RIGYYKAYLSQLKKAADDGANMVGYFAWSLLDNFEWRLGYTSRFGIVYVDYSNLK 176
Score = 29.5 bits (58), Expect(2) = 7e-025
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = +1 / +3
Query: 631 LERHPKASAYWFRDMLQKH 687
L+R+PK SA WF+ +L+++
Sbjct: 171 LKRYPKMSANWFKHLLERN 227
>gb|CV273187.1|CV273187 WS0171.B21_P05 PTxD-NR-A-8 Populus trichocarpa x Populus deltoides
cDNA clone WS0171_P05 3', mRNA sequence
Length = 600
Score = 97.3 bits (206), Expect(2) = 1e-024
Identities = 35/68 (51%), Positives = 50/68 (73%)
Frame = +1 / -2
Query: 415 MDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSK 594
++ G LT Q L+DT R+ +Y+ +L+ LR A+ +G V GYFAWS LD+FEW SGYT +
Sbjct: 494 VNNEGKLTLKQQLNDTMRIDYYRSHLSFLRLAMAEGVKVKGYFAWSFLDDFEWNSGYTVR 315
Query: 595 FGIVYVDF 618
FGI+Y+D+
Sbjct: 314 FGIIYIDY 291
Score = 35.9 bits (72), Expect(2) = 1e-024
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +1 / -2
Query: 340 EGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
+G+ + Y K KY +P ++ITENG+ + N
Sbjct: 578 QGIRKLLLYTKRKYNDPVIYITENGVSEVNN 486
>gb|CX658670.1|CX658670 PO01020G08 Poplar SC cDNA library Populus alba x Populus tremula
var. glandulosa cDNA clone PO01020G08 5', mRNA sequence
Length = 709
Score = 79.4 bits (167), Expect(3) = 2e-024
Identities = 32/86 (37%), Positives = 50/86 (58%)
Frame = +1 / +2
Query: 244 SYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQ 423
SY+ D +V E+NG PIG + WLY+ P G+ + Y+K Y NP VFITENG+ +
Sbjct: 449 SYTDDRRVSQTTEKNGVPIGTPTDLNWLYVYPRGIQDVLLYIKDNYKNPPVFITENGIAE 628
Query: 424 PGNLTRGQYLHDTTRVQFYKGYLAEL 501
+ L D+ R++++ +L+ L
Sbjct: 629 NASRPLAFALKDSWRIRYHSAHLSYL 706
Score = 48.3 bits (99), Expect(3) = 2e-024
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +1 / +2
Query: 127 PKFTPEQAKLVKGSADYIGINQYTASYVKGQKL 225
PKFT EQ+ ++KGS D++G+N YTA+Y + L
Sbjct: 329 PKFTKEQSAMLKGSLDFLGLNYYTANYAESVPL 427
Score = 22.6 bits (43), Expect(3) = 2e-024
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLPQ 131
G YP M+ +V RLP+
Sbjct: 284 GDYPDSMRTLVGNRLPK 334
>gb|CK090371.1|CK090371 C092P56.3pR Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA clone C092P56 3', mRNA sequence
Length = 543
Score = 76.7 bits (161), Expect(3) = 3e-024
Identities = 26/56 (46%), Positives = 40/56 (71%)
Frame = +1 / -1
Query: 451 LHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
L D R+++ +L L KAI +GA+V GY+ W+ D+FEW +GYT +FG++Y+DF
Sbjct: 393 LKDGLRIRYLASHLQYLSKAIKEGANVKGYYQWAFWDDFEWDAGYTVRFGMIYIDF 226
Score = 47.8 bits (98), Expect(3) = 3e-024
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +1 / -1
Query: 322 WLYIVPEGMYGCVNYLKHKYGNPTVFITENGMDQPGN 432
WL+I +G+Y + Y++ KY NP ++ITENG+ N
Sbjct: 528 WLFIYRKGIYDLMLYVRDKYKNPPIYITENGLADANN 418
Score = 24.9 bits (48), Expect(3) = 3e-024
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1 / -1
Query: 631 LERHPKASAYWFRDML 678
L+R+ K SAYWF+ L
Sbjct: 216 LKRYMKYSAYWFKMFL 169
>gb|BU896443.1|BU896443 X040G03 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 729
Score = 81.7 bits (172), Expect(3) = 6e-024
Identities = 30/81 (37%), Positives = 45/81 (55%)
Frame = +1 / +2
Query: 172 DYIGINQYTASYVKGQKLLQQKPTSYSADWQVQYVLERNGKPIGPQANSKWLYIVPEGMY 351
D++G+N YTA Y Y D +R+G P+GPQA + W Y+ PEG+
Sbjct: 377 DFVGLNYYTAYYAANANPADPDHLRYQTDSNAIIKAKRDGNPLGPQAGATWQYVYPEGIK 556
Query: 352 GCVNYLKHKYGNPTVFITENG 414
+N+ K+ Y +P ++ITENG
Sbjct: 557 YLLNHTKYNYEDPVIYITENG 619
Score = 38.2 bits (77), Expect(3) = 6e-024
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +2 / +2
Query: 2 NSTEDQAAAQRARDFHVGWFADPL 73
NST+D AA+R+ DF +GWF +P+
Sbjct: 215 NSTDDYDAAKRSLDFSLGWFLNPI 286
Score = 28.6 bits (56), Expect(3) = 6e-024
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3 / +2
Query: 81 GHYPQIMQDIVKERLP 128
G YP M+++VKERLP
Sbjct: 293 GDYPTSMRELVKERLP 340
>gb|DN485248.1|DN485248 M122A11.3pR Populus female catkins cDNA library Populus trichocarpa
cDNA clone M122A11 3', mRNA sequence
Length = 821
Score = 68.4 bits (143), Expect(2) = 1e-023
Identities = 24/40 (60%), Positives = 30/40 (75%)
Frame = +1 / -1
Query: 499 LRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
LR D G DV G+FAWS LD+FEW SGY S+FG+ Y+D+
Sbjct: 608 LRSINDHGVDVKGFFAWSFLDDFEWGSGYGSRFGLFYIDY 489
Score = 61.6 bits (128), Expect(2) = 1e-023
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +1 / -1
Query: 334 VPEGMYGCVNYLKHKYGNPTVFITENGMDQPGNLTRGQYLHDTTRVQFYKGYLAELRKAI 513
+PEG+ +NY+K Y NP ++ITENG+D + + + L+D R Q+YK + ++I
Sbjct: 776 IPEGIRHLLNYIKDAYENPPIYITENGVDDVNSSSLEEALNDAIREQYYKDIFHNVLRSI 597
Query: 514 DD 519
+D
Sbjct: 596 ND 591
>gb|CK107403.1|CK107403 UB56BPD10.5pR Populus active cambium cDNA library Populus tremula
cDNA clone UB56BPD10 5', mRNA sequence
Length = 473
Score = 96.4 bits (204), Expect(2) = 4e-023
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +1 / +1
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA L +AI DG V G FAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 49 EVLGDNLRVRYFKGYLASLAQAIKDGVQVKGCFAWSLLDNFEWAQGYTKRFGLVYVDY 222
Score = 31.8 bits (63), Expect(2) = 4e-023
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / +1
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 232 LSRHPKSSAYWFLRFLK 282
>gb|CK097608.1|CK097608 UB56BPD10.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB56BPD10 3', mRNA sequence
Length = 459
Score = 96.4 bits (204), Expect(2) = 4e-023
Identities = 36/58 (62%), Positives = 44/58 (75%)
Frame = +1 / -2
Query: 445 QYLHDTTRVQFYKGYLAELRKAIDDGADVAGYFAWSLLDNFEWQSGYTSKFGIVYVDF 618
+ L D RV+++KGYLA L +AI DG V G FAWSLLDNFEW GYT +FG+VYVD+
Sbjct: 422 EVLGDNLRVRYFKGYLASLAQAIKDGVQVKGCFAWSLLDNFEWAQGYTKRFGLVYVDY 249
Score = 31.8 bits (63), Expect(2) = 4e-023
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1 / -2
Query: 631 LERHPKASAYWFRDMLQ 681
L RHPK+SAYWF L+
Sbjct: 239 LSRHPKSSAYWFLRFLK 189
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 421,729,925
Number of Sequences: 369679
Number of extensions: 5900709
Number of successful extensions: 32817
Number of sequences better than 1.0e-020: 65
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 11221882980
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)