TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950089.2.3
(824 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|AJ769297.1|AJ769297 AJ769297 Populus euphratica leaf adu... 191 3e-054
gb|BU873882.1|BU873882 Q061A01 Populus flower cDNA library ... 192 4e-054
gb|DT495598.1|DT495598 WS01120.BR_P04 PT-P-FL-A-2 Populus t... 191 5e-054
gb|CV248490.1|CV248490 WS01120.B21_P04 PT-P-FL-A-2 Populus ... 191 5e-054
gb|DT498907.1|DT498907 WS0116.BR_L05 PT-P-FL-A-2 Populus tr... 191 5e-054
gb|DT500911.1|DT500911 PX0019.BR_M17 PT-X-FL-A-1 Populus tr... 191 5e-054
gb|CV246557.1|CV246557 WS01111.B21_B06 PT-P-FL-A-2 Populus ... 193 1e-053
gb|CA825212.1|CA825212 R55B12 two-month-old roots from clon... 189 2e-053
gb|CK098245.1|CK098245 A009P39.5pR Hybrid aspen plasmid lib... 187 7e-053
gb|CK098220.1|CK098220 A008P12.5pR Hybrid aspen plasmid lib... 180 6e-051
gb|DT489931.1|DT489931 WS02543.B21_J08 PT-MB-N-A-15 Populus... 174 9e-049
gb|CB239680.1|CB239680 RSH15C07 two-month-old roots from cl... 176 1e-048
gb|AI161908.1|AI161908 A009P39U Hybrid aspen plasmid librar... 179 1e-048
gb|DT475725.1|DT475725 WS0128.BR_A07 PT-GT-FL-A-3 Populus t... 191 4e-048
gb|DT499923.1|DT499923 WS9991.BR_L17 PT-P-FL-A-2 Populus tr... 191 4e-048
gb|CV236388.1|CV236388 WS01223.B21_O18 PT-GT-FL-A-3 Populus... 170 1e-047
gb|BU871910.1|BU871910 Q036A01 Populus flower cDNA library ... 186 1e-046
gb|CF231938.1|CF231938 PtaC0027F12F1212 Poplar cDNA library... 185 3e-046
gb|AI162294.1|AI162294 A015P38U Hybrid aspen plasmid librar... 179 1e-045
gb|BU820620.1|BU820620 UB12CPB07 Populus tremula cambium cD... 161 3e-045
gb|BI128260.1|BI128260 G073P32Y Populus cambium cDNA librar... 177 1e-043
gb|CV238776.1|CV238776 WS0128.B21.1_A07 PT-GT-FL-A-3 Populu... 156 1e-043
gb|BU824497.1|BU824497 UB65DPA03 Populus tremula cambium cD... 91 4e-040
gb|AI164764.1|AI164764 A068P40U Hybrid aspen plasmid librar... 144 7e-040
gb|CK099512.1|CK099512 A071P32.5pR Hybrid aspen plasmid lib... 158 4e-038
gb|CK088432.1|CK088432 A052P67.3pR Hybrid aspen plasmid lib... 79 4e-033
gb|CK116853.1|CK116853 B018P72 Hybrid aspen plasmid library... 140 1e-032
gb|AI164945.1|AI164945 A071P32U Hybrid aspen plasmid librar... 138 4e-032
gb|AI162392.1|AI162392 A016P78U Hybrid aspen plasmid librar... 67 3e-024
gb|CF228071.1|CF228071 PtaXM0008D2D0208 Poplar cDNA library... 111 8e-024
gb|DT481964.1|DT481964 WS02533.BR_H16 PT-MB-N-A-15 Populus ... 110 1e-023
gb|DT487357.1|DT487357 WS02533.B21_H16 PT-MB-N-A-15 Populus... 110 1e-023
gb|CF234811.1|CF234811 PtaJXT0015D8D0808 Poplar cDNA librar... 104 7e-022
>gb|AJ769297.1|AJ769297 AJ769297 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100028D12F1, mRNA sequence
Length = 618
Score = 191 bits (412), Expect(2) = 3e-054
Identities = 71/105 (67%), Positives = 86/105 (81%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GPL+SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 104 GAGSFFKVLLKNFDVLSGPLVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 283
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVN 256
TFA +IEW+P W YA+L C LV+P+F+G AYVY++F RP F N
Sbjct: 284 TFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFAN 418
Score = 103 bits (220), Expect(2) = 1e-025
Identities = 56/97 (57%), Positives = 61/97 (62%)
Frame = +2 / -1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 405 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 226
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* GP RTSK L TL+K
Sbjct: 225 ST*DLVSIALIDAYRG*TRLTKGPERTSKFLRRTLKK 115
Score = 40.9 bits (83), Expect(2) = 3e-054
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3 / +2
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXS 112
+ + K DDV AAE+YIE+N AF LI+K S
Sbjct: 455 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKS 568
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -1
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 552 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 457
>gb|BU873882.1|BU873882 Q061A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 555
Score = 192 bits (414), Expect(2) = 4e-054
Identities = 73/107 (68%), Positives = 88/107 (82%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSFLKVL NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 76 GTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 255
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W +AKL C LV+P+F+G AYVY++F RP + N Q
Sbjct: 256 TFAKLIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 396
Score = 106 bits (226), Expect(2) = 2e-026
Identities = 57/97 (58%), Positives = 64/97 (65%)
Frame = +2 / -2
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 377 GLTKFS*TYAAPLKYGTTNQQVKMSFANGQIGIHSMSLAKVSSKRVIME*RIQ*VSHCLS 198
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST FVSIAL EAYRG* ++GPARTSK T +K
Sbjct: 197 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 87
Score = 39.6 bits (80), Expect(2) = 4e-054
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = -3 / +1
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXSXS 106
+ + K DDV AAE+YIE+N AF LI+K S
Sbjct: 427 KKDIFSKPDDVLSAAEKYIEENGTYAFEKLITKDKSRRSS 546
Score = 32.7 bits (65), Expect(2) = 2e-026
Identities = 17/34 (50%), Positives = 20/34 (58%)
Frame = +2 / -2
Query: 122 VDLLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
+ L+MS S A F S+Y SAA TSS L SF
Sbjct: 530 LSLVMSFSKA*VPFSSMYFSAADRTSSGLLKISF 429
>gb|DT495598.1|DT495598 WS01120.BR_P04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_P04 5', mRNA sequence
Length = 676
Score = 191 bits (412), Expect(2) = 5e-054
Identities = 71/107 (66%), Positives = 87/107 (81%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 84 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 263
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W YA+L C LV+P+F+G AYVY++F RP F N Q
Sbjct: 264 TFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 404
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 56/97 (57%), Positives = 62/97 (63%)
Frame = +2 / -1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 385 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 206
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* +GP RTSK L TL+K
Sbjct: 205 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 95
Score = 40.0 bits (81), Expect(2) = 5e-054
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / +3
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 435 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 533
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -1
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 532 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 437
>gb|CV248490.1|CV248490 WS01120.B21_P04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_P04 3', mRNA sequence
Length = 657
Score = 191 bits (412), Expect(2) = 5e-054
Identities = 71/107 (66%), Positives = 87/107 (81%)
Frame = -3 / -2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 593 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 414
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W YA+L C LV+P+F+G AYVY++F RP F N Q
Sbjct: 413 TFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 273
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 56/97 (57%), Positives = 62/97 (63%)
Frame = +2 / +1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 292 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 471
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* +GP RTSK L TL+K
Sbjct: 472 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 582
Score = 40.0 bits (81), Expect(2) = 5e-054
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / -2
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 242 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 144
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / +1
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 145 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 240
>gb|DT498907.1|DT498907 WS0116.BR_L05 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_L05
5', mRNA sequence
Length = 635
Score = 191 bits (412), Expect(2) = 5e-054
Identities = 71/107 (66%), Positives = 87/107 (81%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 131 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 310
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W YA+L C LV+P+F+G AYVY++F RP F N Q
Sbjct: 311 TFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 451
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 56/97 (57%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 432 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 253
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* +GP RTSK L TL+K
Sbjct: 252 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 142
Score = 40.0 bits (81), Expect(2) = 5e-054
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / +2
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 482 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 580
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 579 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 484
>gb|DT500911.1|DT500911 PX0019.BR_M17 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_M17
5', mRNA sequence
Length = 624
Score = 191 bits (412), Expect(2) = 5e-054
Identities = 71/107 (66%), Positives = 87/107 (81%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 117 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 296
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W YA+L C LV+P+F+G AYVY++F RP F N Q
Sbjct: 297 TFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 437
Score = 104 bits (221), Expect(2) = 1e-025
Identities = 56/97 (57%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 418 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 239
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* +GP RTSK L TL+K
Sbjct: 238 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 128
Score = 40.0 bits (81), Expect(2) = 5e-054
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / +3
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 468 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 566
Score = 32.7 bits (65), Expect(2) = 1e-025
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 565 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 470
>gb|CV246557.1|CV246557 WS01111.B21_B06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_B06 3', mRNA sequence
Length = 767
Score = 193 bits (415), Expect(2) = 1e-053
Identities = 73/107 (68%), Positives = 88/107 (82%)
Frame = -3 / -1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSFLKVL NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 740 GTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 561
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W +AKL C LV+P+F+G AYVY++F RP + N Q
Sbjct: 560 TFAKVIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 420
Score = 109 bits (232), Expect(2) = 3e-026
Identities = 58/97 (59%), Positives = 65/97 (67%)
Frame = +2 / +1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T*A PL G T Q+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 439 GLTKFS*T*AAPLKYGTTNQQVKMSFANGQIGIHSMTLAKVSSKRVIME*RIQ*VSHCLS 618
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST FVSIAL EAYRG* ++GPARTSK T +K
Sbjct: 619 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 729
Score = 37.3 bits (75), Expect(2) = 1e-053
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -3 / -1
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXSXS 106
+ + K DDV AAE+YIE++ AF LI+K S
Sbjct: 389 KKDIFSKPDDVLSAAEKYIEEDGTYAFEKLITKDKSRRSS 270
Score = 29.5 bits (58), Expect(2) = 3e-026
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +1 / +3
Query: 127 LADELXKCXXXVLFNISLCSXXNIIRF 207
L +EL K +LFN+ LC N+I F
Sbjct: 291 LGNELLKSISPILFNVFLCGR*NVIWF 371
>gb|CA825212.1|CA825212 R55B12 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 550
Score = 189 bits (408), Expect(2) = 2e-053
Identities = 70/107 (65%), Positives = 86/107 (80%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 91 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 270
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W YA+L C LV+P+F+G YVY++F RP F N Q
Sbjct: 271 TFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 411
Score = 102 bits (217), Expect(2) = 4e-025
Identities = 55/97 (56%), Positives = 61/97 (62%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 392 GLTKFS*TYVAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 213
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* +GP RTSK L TL+K
Sbjct: 212 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 102
Score = 40.0 bits (81), Expect(2) = 2e-053
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / +1
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 442 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 540
Score = 32.7 bits (65), Expect(2) = 4e-025
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 539 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 444
>gb|CK098245.1|CK098245 A009P39.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A009P39 5', mRNA sequence
Length = 575
Score = 187 bits (402), Expect(2) = 7e-053
Identities = 69/106 (65%), Positives = 85/106 (80%)
Frame = -3 / +2
Query: 567 SGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELT 388
+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELT
Sbjct: 5 TGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELT 184
Query: 387 FAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
FA +IEW+P W YA+L C LV+P+F+G YVY++F RP F N Q
Sbjct: 185 FAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 322
Score = 105 bits (225), Expect(2) = 3e-026
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T* PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 303 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 124
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL EAYRG* +GP RTSK L TL+K
Sbjct: 123 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 13
Score = 40.9 bits (83), Expect(2) = 7e-053
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3 / +2
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXS 112
+ + K DDV AAE+YIE+N AF LI+K S
Sbjct: 353 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKS 466
Score = 32.7 bits (65), Expect(2) = 3e-026
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 450 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 355
>gb|CK098220.1|CK098220 A008P12.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A008P12 5', mRNA sequence
Length = 547
Score = 180 bits (388), Expect(2) = 6e-051
Identities = 67/105 (63%), Positives = 83/105 (79%)
Frame = -3 / +1
Query: 564 GSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTF 385
G +KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELTF
Sbjct: 10 GRPIKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTF 189
Query: 384 APIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
A +IEW+P W YA+L C LV+P+F+G YVY++F RP F N Q
Sbjct: 190 AKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 324
Score = 102 bits (218), Expect(2) = 3e-025
Identities = 56/95 (58%), Positives = 60/95 (63%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T* PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 305 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 126
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTL 553
ST VSIAL EAYRG* +GP RTSK L TL
Sbjct: 125 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTL 21
Score = 40.9 bits (83), Expect(2) = 6e-051
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3 / +1
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXS 112
+ + K DDV AAE+YIE+N AF LI+K S
Sbjct: 355 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKS 468
Score = 32.7 bits (65), Expect(2) = 3e-025
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 452 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 357
>gb|DT489931.1|DT489931 WS02543.B21_J08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_J08 3', mRNA sequence
Length = 819
Score = 174 bits (374), Expect(2) = 9e-049
Identities = 63/96 (65%), Positives = 79/96 (82%)
Frame = -3 / -2
Query: 537 NFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPF 358
NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELTFA +IEW+P
Sbjct: 812 NFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPI 633
Query: 357 WSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
W YA+L C LV+P+F+G +YVY++F RP F N Q
Sbjct: 632 WPYARLILTCWLVIPYFSGASYVYENFVRPFFANPQ 525
Score = 95.5 bits (202), Expect(2) = 4e-023
Identities = 52/91 (57%), Positives = 57/91 (62%)
Frame = +2 / +1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 544 GLTKFS*TYEAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 723
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLL 541
ST VSIAL +AYRG* +GP RTSK L
Sbjct: 724 ST*DLVSIALIDAYRG*TRLTTGPERTSKFL 816
Score = 40.0 bits (81), Expect(2) = 9e-049
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / -2
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 494 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 396
Score = 32.7 bits (65), Expect(2) = 4e-023
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / +1
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 397 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 492
>gb|CB239680.1|CB239680 RSH15C07 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 579
Score = 176 bits (378), Expect(2) = 1e-048
Identities = 65/108 (60%), Positives = 83/108 (76%)
Frame = -3 / +3
Query: 573 MGSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFE 394
+G + + NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFE
Sbjct: 117 LGLEASSRFFLRNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFE 296
Query: 393 LTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
LTFA +IEW+P W YA+L C LV+P+F+G AYVY++F RP F N Q
Sbjct: 297 LTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 440
Score = 99.6 bits (211), Expect(2) = 2e-024
Identities = 54/97 (55%), Positives = 60/97 (61%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 421 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 242
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* +GP RTSK L L +
Sbjct: 241 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLKKNLEE 131
Score = 37.7 bits (76), Expect(2) = 1e-048
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3 / +3
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLIS 130
+ + K DDV AAE+YIE+N AF LI+
Sbjct: 471 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLIT 566
Score = 32.7 bits (65), Expect(2) = 2e-024
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -3
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 568 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 473
>gb|AI161908.1|AI161908 A009P39U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 505
Score = 179 bits (385), Expect(2) = 1e-048
Identities = 66/101 (65%), Positives = 81/101 (80%)
Frame = -3 / +3
Query: 552 KVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPII 373
KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELTFA +I
Sbjct: 3 KVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVI 182
Query: 372 EWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
EW+P W YA+L C LV+P+F+G YVY++F RP F N Q
Sbjct: 183 EWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 305
Score = 102 bits (218), Expect(2) = 5e-023
Identities = 56/95 (58%), Positives = 60/95 (63%)
Frame = +2 / -1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T* PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 286 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 107
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTL 553
ST VSIAL EAYRG* +GP RTSK L TL
Sbjct: 106 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTL 2
Score = 34.5 bits (69), Expect(2) = 1e-048
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = -3 / +3
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAF 145
+ + K DDV AAE+YIE+N AF
Sbjct: 336 KKDVFSKPDDVLTAAEKYIEENGTSAF 416
Score = 24.9 bits (48), Expect(2) = 5e-023
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2 / -1
Query: 161 FCSIYLSAAXXTSSDLPSFSF 223
F S+Y SAA TSS L SF
Sbjct: 400 FSSMYFSAAVRTSSGLLKTSF 338
>gb|DT475725.1|DT475725 WS0128.BR_A07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_A07 5', mRNA sequence
Length = 574
Score = 191 bits (412), Expect = 4e-048
Identities = 71/107 (66%), Positives = 87/107 (81%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 178 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 357
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W YA+L C LV+P+F+G AYVY++F RP F N Q
Sbjct: 358 TFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 498
Score = 104 bits (221), Expect = 9e-022
Identities = 56/97 (57%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 479 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 300
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL +AYRG* +GP RTSK L TL+K
Sbjct: 299 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKK 189
>gb|DT499923.1|DT499923 WS9991.BR_L17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_B06 5', mRNA sequence
Length = 483
Score = 191 bits (412), Expect = 4e-048
Identities = 72/105 (68%), Positives = 87/105 (82%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSFLKVL NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 168 GTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 347
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVN 256
TFA +IEW+P W +AKL C LV+P+F+G AYVY++F RP + N
Sbjct: 348 TFAKVIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYAN 482
Score = 109 bits (232), Expect = 3e-023
Identities = 58/97 (59%), Positives = 65/97 (67%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T*A PL G T Q+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 469 GLTKFS*T*AAPLKYGTTNQQVKMSFANGQIGIHSMTLAKVSSKRVIME*RIQ*VSHCLS 290
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST FVSIAL EAYRG* ++GPARTSK T +K
Sbjct: 289 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 179
>gb|CV236388.1|CV236388 WS01223.B21_O18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_O18 3', mRNA sequence
Length = 818
Score = 170 bits (365), Expect(2) = 1e-047
Identities = 62/94 (65%), Positives = 77/94 (81%)
Frame = -3 / -1
Query: 531 DVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWS 352
DVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELTFA +IEW+P W
Sbjct: 818 DVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWP 639
Query: 351 YAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
YA+L C LV+P+F+G AYVY++F RP F N Q
Sbjct: 638 YARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 537
Score = 91.8 bits (194), Expect(2) = 5e-022
Identities = 50/87 (57%), Positives = 55/87 (63%)
Frame = +2 / +1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T A PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 556 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 735
Query: 449 STGFFVSIALTEAYRG*ASDMSGPART 529
ST VSIAL +AYRG* +GP RT
Sbjct: 736 ST*DLVSIALIDAYRG*TRLTTGPERT 816
Score = 40.0 bits (81), Expect(2) = 1e-047
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / -1
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 506 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 408
Score = 32.7 bits (65), Expect(2) = 5e-022
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / +1
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 409 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 504
>gb|BU871910.1|BU871910 Q036A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 407
Score = 186 bits (401), Expect = 1e-046
Identities = 71/107 (66%), Positives = 87/107 (81%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSFLKVL NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 72 GTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 251
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
TFA +IEW+P W +AKL C LV+P+F+G AYV+++ RP + N Q
Sbjct: 252 TFAKLIEWIPIWPFAKLILTCWLVVPYFSGAAYVHENSVRPFYANPQ 392
Score = 104 bits (222), Expect = 7e-022
Identities = 56/97 (57%), Positives = 64/97 (65%)
Frame = +2 / -2
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G ++S*T A PL G T Q+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 373 GLTEFS*TYAAPLKYGTTNQQVKMSFANGQIGIHSMSLAKVSSKRVIME*RIQ*VSHCLS 194
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST FVSIAL EAYRG* ++GPARTSK T +K
Sbjct: 193 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKK 83
>gb|CF231938.1|CF231938 PtaC0027F12F1212 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 571
Score = 185 bits (399), Expect = 3e-046
Identities = 68/103 (66%), Positives = 84/103 (81%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 115 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 294
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMF 262
TFA +IEW+P W YA+L C LV+P+F+G YVY++F RP F
Sbjct: 295 TFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFF 423
Score = 105 bits (225), Expect = 3e-022
Identities = 57/97 (58%), Positives = 62/97 (63%)
Frame = +2 / -3
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T* PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 416 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 237
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
ST VSIAL EAYRG* +GP RTSK L TL+K
Sbjct: 236 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 126
>gb|AI162294.1|AI162294 A015P38U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 566
Score = 179 bits (386), Expect(2) = 1e-045
Identities = 66/100 (66%), Positives = 82/100 (82%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 79 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 258
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
TFA +IEW+P W YA+L C LV+P+F+G YVY++F R
Sbjct: 259 TFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVR 378
Score = 104 bits (221), Expect = 9e-022
Identities = 56/94 (59%), Positives = 61/94 (64%)
Frame = +2 / -1
Query: 278 KWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTG 457
K+S*T* PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC SST
Sbjct: 371 KFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLSST* 192
Query: 458 FFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
VSIAL EAYRG* +GP RTSK L TL+K
Sbjct: 191 DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 90
Score = 24.0 bits (46), Expect(2) = 1e-045
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3 / +2
Query: 207 KSDDVXXAAERYIEQ 163
K DDV AAE+Y E+
Sbjct: 446 KPDDVLTAAEKYTER 490
>gb|BU820620.1|BU820620 UB12CPB07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 504
Score = 161 bits (346), Expect(2) = 3e-045
Identities = 58/90 (64%), Positives = 72/90 (80%)
Frame = -3 / +2
Query: 519 GPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAKL 340
GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELTFA +IEW+P W YA+L
Sbjct: 29 GPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWPYARL 208
Query: 339 FFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
C LV+P+F+G YVY++F RP F N Q
Sbjct: 209 ILTCWLVIPYFSGATYVYENFVRPFFANPQ 298
Score = 89.5 bits (189), Expect(2) = 2e-021
Identities = 49/91 (53%), Positives = 56/91 (61%)
Frame = +2 / -1
Query: 269 GRXKWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*S 448
G K+S*T PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 279 GLTKFS*TYVAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 100
Query: 449 STGFFVSIALTEAYRG*ASDMSGPARTSKLL 541
ST VSIAL EAYRG* +GP + ++L
Sbjct: 99 ST*DLVSIALIEAYRG*TRLTTGPRKNIEVL 7
Score = 40.9 bits (83), Expect(2) = 3e-045
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -3 / +2
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXS 112
+ + K DDV AAE+YIE+N AF LI+K S
Sbjct: 329 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITKGKSKS 442
Score = 32.7 bits (65), Expect(2) = 2e-021
Identities = 17/32 (53%), Positives = 19/32 (59%)
Frame = +2 / -1
Query: 128 LLMSXSNAXXXFCSIYLSAAXXTSSDLPSFSF 223
L+MS S A F S+Y SAA TSS L SF
Sbjct: 426 LVMSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 331
>gb|BI128260.1|BI128260 G073P32Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 421
Score = 177 bits (380), Expect = 1e-043
Identities = 65/100 (65%), Positives = 81/100 (81%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITL EL
Sbjct: 105 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLLEL 284
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
TFA +IEW+P W YA+L C LV+P+F+G YVY++F R
Sbjct: 285 TFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVR 404
Score = 104 bits (221), Expect = 9e-022
Identities = 56/94 (59%), Positives = 61/94 (64%)
Frame = +2 / -1
Query: 278 KWS*T*AXPLNQGKTXXQLKNSFAYDQNGSHSIIGAKVSSNKVINEXXTQ*VSHC*SSTG 457
K+S*T* PL G T Q+K S AY Q G HS+ AKVSS VI E Q*VSHC SST
Sbjct: 397 KFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLSST* 218
Query: 458 FFVSIALTEAYRG*ASDMSGPARTSKLLASTLRK 559
VSIAL EAYRG* +GP RTSK L TL+K
Sbjct: 217 DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKK 116
>gb|CV238776.1|CV238776 WS0128.B21.1_A07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_A07 3', mRNA sequence
Length = 661
Score = 156 bits (336), Expect(2) = 1e-043
Identities = 57/87 (65%), Positives = 70/87 (80%)
Frame = -3 / -1
Query: 510 ISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYAKLFFN 331
+SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELTFA +IEW+P W YA+L
Sbjct: 661 VSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWPYARLILT 482
Query: 330 CXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
C LV+P+F+G AYVY++F RP F N Q
Sbjct: 481 CWLVIPYFSGAAYVYENFVRPFFANPQ 401
Score = 40.0 bits (81), Expect(2) = 1e-043
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / -1
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 370 KKDVFSKPDDVLTAAEKYIEENGTSAFEKLITK 272
>gb|BU824497.1|BU824497 UB65DPA03 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 624
Score = 91.3 bits (193), Expect(4) = 4e-040
Identities = 32/53 (60%), Positives = 40/53 (75%)
Frame = -3 / +1
Query: 408 ITLFELTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
ITLFELTFA +IEW+P W YA+L C LV+P+F+G YVY++F RP F N Q
Sbjct: 280 ITLFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 438
Score = 51.0 bits (105), Expect(4) = 4e-040
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = -3 / +1
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPL 490
G+GSF KVL NFDVL+GP++SL YPL
Sbjct: 115 GTGSFFKVLLKNFDVLSGPVVSLVYPL 195
Score = 40.0 bits (81), Expect(4) = 4e-040
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = -3 / +1
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISKSTXXS 112
+ + K DDV AAERYIE+N AF LI+ S
Sbjct: 469 KKDVFSKPDDVLTAAERYIEENGTTAFEKLITNGKSKS 582
Score = 38.6 bits (78), Expect(4) = 4e-040
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = -3 / +3
Query: 471 IETKNPVDDQQWLTYWVXXS 412
++TK+ VDD+QWLTYW+ S
Sbjct: 216 LQTKSHVDDKQWLTYWILYS 275
>gb|AI164764.1|AI164764 A068P40U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 424
Score = 144 bits (310), Expect(2) = 7e-040
Identities = 54/79 (68%), Positives = 64/79 (81%)
Frame = -3 / +1
Query: 558 FLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAP 379
F KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFELTFA
Sbjct: 1 FFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAK 180
Query: 378 IIEWLPFWSYAKLFFNCXL 322
+IEW+P W YA+L C L
Sbjct: 181 VIEWIPIWPYARLILTCWL 237
Score = 39.6 bits (80), Expect(2) = 7e-040
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = -3 / +3
Query: 336 FNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
F+ + +P+F+G YVY++F RP F N Q
Sbjct: 222 FDLLVGIPYFSGATYVYENFVRPFFANPQ 308
>gb|CK099512.1|CK099512 A071P32.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A071P32 5', mRNA sequence
Length = 384
Score = 158 bits (340), Expect = 4e-038
Identities = 61/87 (70%), Positives = 72/87 (82%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSFLKVL NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 123 GTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 302
Query: 390 TFAPIIEWLPFWSYAKLFFNCXLVLPW 310
TFA +IEW+P W +AKL C L +P+
Sbjct: 303 TFAKLIEWIPIWPFAKLILTCWLGVPY 383
>gb|CK088432.1|CK088432 A052P67.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A052P67 3', mRNA sequence
Length = 663
Score = 79.4 bits (167), Expect(3) = 4e-033
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -3 / -2
Query: 393 LTFAPIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXRPMFVNRQ 250
LTFA +IEW+P W +AKL C LV+P+F+G AYVY++F RP + N Q
Sbjct: 569 LTFAKLIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 426
Score = 61.1 bits (127), Expect(3) = 4e-033
Identities = 23/31 (74%), Positives = 27/31 (87%)
Frame = -3 / -1
Query: 486 ASVRAIETKNPVDDQQWLTYWVXXSFITLFE 394
AS+RAIETK+ VDD+QWLTYW+ S ITLFE
Sbjct: 663 ASIRAIETKSHVDDKQWLTYWILYSMITLFE 571
Score = 39.1 bits (79), Expect(3) = 4e-033
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3 / -2
Query: 225 RNEKLGKSDDVXXAAERYIEQNXXXAFXXLISK 127
+ + K DDV AAE+YIE+N AF LI+K
Sbjct: 395 KKDIFSKPDDVLSAAEKYIEENGTYAFEKLITK 297
>gb|CK116853.1|CK116853 B018P72 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B018P72 5', mRNA sequence
Length = 482
Score = 140 bits (300), Expect = 1e-032
Identities = 52/72 (72%), Positives = 62/72 (86%)
Frame = -3 / +3
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSF KVL NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 90 GTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 269
Query: 390 TFAPIIEWLPFW 355
TFA +IEW+P W
Sbjct: 270 TFAKVIEWIPIW 305
>gb|AI164945.1|AI164945 A071P32U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 342
Score = 138 bits (296), Expect = 4e-032
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFEL 391
G+GSFLKVL NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+ S ITLFEL
Sbjct: 80 GTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFEL 259
Query: 390 TFAPIIEWLP 361
TFA +IEW+P
Sbjct: 260 TFAKLIEWIP 289
>gb|AI162392.1|AI162392 A016P78U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 395
Score = 67.0 bits (140), Expect(2) = 3e-024
Identities = 27/33 (81%), Positives = 30/33 (90%)
Frame = -3 / +2
Query: 570 GSGSFLKVLANNFDVLAGPLISLAYPLYASVRA 472
G+GSFLKVL NFDVLAGP+ISL YPLYAS+RA
Sbjct: 146 GTGSFLKVLLENFDVLAGPVISLVYPLYASIRA 244
Score = 64.8 bits (135), Expect(2) = 3e-024
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = -3 / +2
Query: 438 WLTYWVXXSFITLFELTFAPIIEWLPFWSYAKLF 337
WLTYW+ S ITLFELTFA +IEW+P W +A F
Sbjct: 275 WLTYWILYSMITLFELTFAKLIEWIPIWPFATPF 376
>gb|CF228071.1|CF228071 PtaXM0008D2D0208 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 681
Score = 111 bits (236), Expect = 8e-024
Identities = 43/97 (44%), Positives = 60/97 (61%)
Frame = -3 / +2
Query: 561 SFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFA 382
S L + ++GP++ L YPLYASV AIE+ + DD+QWL YW+ SF+TL E+
Sbjct: 113 SRLLTFLTHVHTISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQ 292
Query: 381 PIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
++EW+P W KL LVLP F G A+VY+ + R
Sbjct: 293 SLLEWIPIWYSLKLVLAAWLVLPQFKGAAFVYERYVR 403
>gb|DT481964.1|DT481964 WS02533.BR_H16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_H16 5', mRNA sequence
Length = 731
Score = 110 bits (235), Expect = 1e-023
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = -3 / -1
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
++GP++ L YPLYASV AIE+ + DD+QWL YW+ SF+TL E+ ++EW+P W
Sbjct: 602 ISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSLLEWIPIWYSL 423
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXR 271
KL LVLP F G A+VY+ + R
Sbjct: 422 KLVLAAWLVLPQFKGAAFVYERYVR 348
>gb|DT487357.1|DT487357 WS02533.B21_H16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_H16 3', mRNA sequence
Length = 745
Score = 110 bits (235), Expect = 1e-023
Identities = 41/85 (48%), Positives = 57/85 (67%)
Frame = -3 / +3
Query: 525 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFAPIIEWLPFWSYA 346
++GP++ L YPLYASV AIE+ + DD+QWL YW+ SF+TL E+ ++EW+P W
Sbjct: 144 ISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSLLEWIPIWYSL 323
Query: 345 KLFFNCXLVLPWFNGXAYVYDHFXR 271
KL LVLP F G A+VY+ + R
Sbjct: 324 KLVLAAWLVLPQFKGAAFVYERYVR 398
>gb|CF234811.1|CF234811 PtaJXT0015D8D0808 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 104 bits (222), Expect = 7e-022
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = -3 / +3
Query: 561 SFLKVLANNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVXXSFITLFELTFA 382
S L + ++GP++ L YPLYASV AIE+ + DD+QWL Y + SF+TL E+
Sbjct: 114 SRLLTFLTHVHTISGPVLMLLYPLYASVVAIESPSREDDKQWLAYRILYSFLTLTEMLLQ 293
Query: 381 PIIEWLPFWSYAKLFFNCXLVLPWFNGXAYVYDHFXR 271
++EW+P W KL LVLP F G A+VY+ + R
Sbjct: 294 SLLEWIPIWYSLKLVLAAWLVLPQFKGAAFVYERYVR 404
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 311,514,373
Number of Sequences: 369679
Number of extensions: 4125334
Number of successful extensions: 39997
Number of sequences better than 1.0e-020: 43
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 10784666760
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)