TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2950089.2.2
(1044 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT495598.1|DT495598 WS01120.BR_P04 PT-P-FL-A-2 Populus t... 210 4e-060
gb|CV248490.1|CV248490 WS01120.B21_P04 PT-P-FL-A-2 Populus ... 210 4e-060
gb|DT498907.1|DT498907 WS0116.BR_L05 PT-P-FL-A-2 Populus tr... 210 4e-060
gb|DT500911.1|DT500911 PX0019.BR_M17 PT-X-FL-A-1 Populus tr... 210 4e-060
gb|AJ769297.1|AJ769297 AJ769297 Populus euphratica leaf adu... 210 4e-060
gb|BU873882.1|BU873882 Q061A01 Populus flower cDNA library ... 209 7e-060
gb|CA825212.1|CA825212 R55B12 two-month-old roots from clon... 208 1e-059
gb|CV246557.1|CV246557 WS01111.B21_B06 PT-P-FL-A-2 Populus ... 210 2e-059
gb|CK098245.1|CK098245 A009P39.5pR Hybrid aspen plasmid lib... 205 1e-058
gb|CK098220.1|CK098220 A008P12.5pR Hybrid aspen plasmid lib... 199 1e-056
gb|AI161908.1|AI161908 A009P39U Hybrid aspen plasmid librar... 197 1e-055
gb|DT475725.1|DT475725 WS0128.BR_A07 PT-GT-FL-A-3 Populus t... 210 2e-055
gb|CB239680.1|CB239680 RSH15C07 two-month-old roots from cl... 193 6e-055
gb|DT489931.1|DT489931 WS02543.B21_J08 PT-MB-N-A-15 Populus... 192 8e-055
gb|AI162294.1|AI162294 A015P38U Hybrid aspen plasmid librar... 198 4e-054
gb|CF231938.1|CF231938 PtaC0027F12F1212 Poplar cDNA library... 204 2e-053
gb|DT499923.1|DT499923 WS9991.BR_L17 PT-P-FL-A-2 Populus tr... 208 4e-053
gb|CV236388.1|CV236388 WS01223.B21_O18 PT-GT-FL-A-3 Populus... 186 6e-053
gb|BU871910.1|BU871910 Q036A01 Populus flower cDNA library ... 203 1e-051
gb|BU820620.1|BU820620 UB12CPB07 Populus tremula cambium cD... 177 2e-050
gb|BI128260.1|BI128260 G073P32Y Populus cambium cDNA librar... 195 3e-049
gb|CV238776.1|CV238776 WS0128.B21.1_A07 PT-GT-FL-A-3 Populu... 172 6e-049
gb|AI164764.1|AI164764 A068P40U Hybrid aspen plasmid librar... 159 9e-047
gb|BU824497.1|BU824497 UB65DPA03 Populus tremula cambium cD... 101 2e-046
gb|CK099512.1|CK099512 A071P32.5pR Hybrid aspen plasmid lib... 171 7e-042
gb|CK088432.1|CK088432 A052P67.3pR Hybrid aspen plasmid lib... 90 1e-038
gb|CK116853.1|CK116853 B018P72 Hybrid aspen plasmid library... 149 8e-036
gb|AI164945.1|AI164945 A071P32U Hybrid aspen plasmid librar... 145 4e-034
gb|CF228071.1|CF228071 PtaXM0008D2D0208 Poplar cDNA library... 126 2e-028
gb|DT481964.1|DT481964 WS02533.BR_H16 PT-MB-N-A-15 Populus ... 126 2e-028
gb|DT487357.1|DT487357 WS02533.B21_H16 PT-MB-N-A-15 Populus... 126 2e-028
gb|CF234811.1|CF234811 PtaJXT0015D8D0808 Poplar cDNA librar... 120 2e-026
gb|AI162392.1|AI162392 A016P78U Hybrid aspen plasmid librar... 71 4e-026
gb|CV230612.1|CV230612 WS0192.B21_B13 PT-DX-N-A-10 Populus ... 110 1e-023
>gb|DT495598.1|DT495598 WS01120.BR_P04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_P04 5', mRNA sequence
Length = 676
Score = 210 bits (453), Expect(2) = 4e-060
Identities = 78/111 (70%), Positives = 94/111 (84%)
Frame = +2 / +3
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 72 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 251
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W YA+L CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 252 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 404
Score = 120 bits (257), Expect(3) = 5e-034
Identities = 63/101 (62%), Positives = 69/101 (68%)
Frame = -1 / -1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 385 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 206
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* +GP RTSKFL TL+K P P
Sbjct: 205 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKKLPVP 83
Score = 101 bits (215), Expect(2) = 3e-022
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = -3 / -3
Query: 427 LAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPV 248
L V K HK+++NI ST E DQPA + + I P W PL+++ K L++ D *V++PV
Sbjct: 404 LWVGKERSHKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLEECDH*VKNPV 225
Query: 247 SEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
S+PLLII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 224 SKPLLIINVRFSLNCPN*CIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 60
Score = 42.3 bits (86), Expect(2) = 4e-060
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +3
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 435 KKDVFSKPDDVLTAAEKYIEENGTSAFE 518
Score = 39.1 bits (79), Expect(3) = 5e-034
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -1
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 526 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 437
Score = 24.0 bits (46), Expect(2) = 3e-022
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 544 DELLKCFWSVLFNISLCS*QNIIRF 470
+ELLK S+LF++ L S N+I F
Sbjct: 527 NELLKSRSSILFDVFLSSS*NVIWF 453
Score = 23.5 bits (45), Expect(3) = 5e-034
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 443 ILLSWDIPYI 414
>gb|CV248490.1|CV248490 WS01120.B21_P04 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01120_P04 3', mRNA sequence
Length = 657
Score = 210 bits (453), Expect(2) = 4e-060
Identities = 78/111 (70%), Positives = 94/111 (84%)
Frame = +2 / -2
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 605 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 426
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W YA+L CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 425 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 273
Score = 120 bits (257), Expect(3) = 5e-034
Identities = 63/101 (62%), Positives = 69/101 (68%)
Frame = -1 / +1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 292 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 471
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* +GP RTSKFL TL+K P P
Sbjct: 472 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKKLPVP 594
Score = 101 bits (215), Expect(2) = 3e-022
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = -3 / +3
Query: 427 LAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPV 248
L V K HK+++NI ST E DQPA + + I P W PL+++ K L++ D *V++PV
Sbjct: 273 LWVGKERSHKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLEECDH*VKNPV 452
Query: 247 SEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
S+PLLII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 453 SKPLLIINVRFSLNCPN*CIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 617
Score = 42.3 bits (86), Expect(2) = 4e-060
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / -2
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 242 KKDVFSKPDDVLTAAEKYIEENGTSAFE 159
Score = 39.1 bits (79), Expect(3) = 5e-034
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 151 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 240
Score = 24.0 bits (46), Expect(2) = 3e-022
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / +3
Query: 544 DELLKCFWSVLFNISLCS*QNIIRF 470
+ELLK S+LF++ L S N+I F
Sbjct: 150 NELLKSRSSILFDVFLSSS*NVIWF 224
Score = 23.5 bits (45), Expect(3) = 5e-034
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 234 ILLSWDIPYI 263
>gb|DT498907.1|DT498907 WS0116.BR_L05 PT-P-FL-A-2 Populus trichocarpa cDNA clone WS0116_L05
5', mRNA sequence
Length = 635
Score = 210 bits (453), Expect(2) = 4e-060
Identities = 78/111 (70%), Positives = 94/111 (84%)
Frame = +2 / +2
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 119 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 298
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W YA+L CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 299 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 451
Score = 120 bits (257), Expect(3) = 5e-034
Identities = 63/101 (62%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 432 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 253
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* +GP RTSKFL TL+K P P
Sbjct: 252 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKKLPVP 130
Score = 101 bits (215), Expect(2) = 3e-022
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = -3 / -2
Query: 427 LAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPV 248
L V K HK+++NI ST E DQPA + + I P W PL+++ K L++ D *V++PV
Sbjct: 451 LWVGKERSHKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLEECDH*VKNPV 272
Query: 247 SEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
S+PLLII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 271 SKPLLIINVRFSLNCPN*CIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 107
Score = 42.3 bits (86), Expect(2) = 4e-060
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 482 KKDVFSKPDDVLTAAEKYIEENGTSAFE 565
Score = 39.1 bits (79), Expect(3) = 5e-034
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 573 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 484
Score = 24.0 bits (46), Expect(2) = 3e-022
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / -2
Query: 544 DELLKCFWSVLFNISLCS*QNIIRF 470
+ELLK S+LF++ L S N+I F
Sbjct: 574 NELLKSRSSILFDVFLSSS*NVIWF 500
Score = 23.5 bits (45), Expect(3) = 5e-034
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 490 ILLSWDIPYI 461
>gb|DT500911.1|DT500911 PX0019.BR_M17 PT-X-FL-A-1 Populus trichocarpa cDNA clone PX0019_M17
5', mRNA sequence
Length = 624
Score = 210 bits (453), Expect(2) = 4e-060
Identities = 78/111 (70%), Positives = 94/111 (84%)
Frame = +2 / +3
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 105 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 284
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W YA+L CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 285 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 437
Score = 120 bits (257), Expect(3) = 5e-034
Identities = 63/101 (62%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 418 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 239
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* +GP RTSKFL TL+K P P
Sbjct: 238 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKKLPVP 116
Score = 101 bits (215), Expect(2) = 3e-022
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = -3 / -2
Query: 427 LAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPV 248
L V K HK+++NI ST E DQPA + + I P W PL+++ K L++ D *V++PV
Sbjct: 437 LWVGKERSHKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLEECDH*VKNPV 258
Query: 247 SEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
S+PLLII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 257 SKPLLIINVRFSLNCPN*CIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 93
Score = 42.3 bits (86), Expect(2) = 4e-060
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +3
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 468 KKDVFSKPDDVLTAAEKYIEENGTSAFE 551
Score = 39.1 bits (79), Expect(3) = 5e-034
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 559 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 470
Score = 24.0 bits (46), Expect(2) = 3e-022
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / -2
Query: 544 DELLKCFWSVLFNISLCS*QNIIRF 470
+ELLK S+LF++ L S N+I F
Sbjct: 560 NELLKSRSSILFDVFLSSS*NVIWF 486
Score = 23.5 bits (45), Expect(3) = 5e-034
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 476 ILLSWDIPYI 447
>gb|AJ769297.1|AJ769297 AJ769297 Populus euphratica leaf adult Populus euphratica cDNA
clone P0000100028D12F1, mRNA sequence
Length = 618
Score = 210 bits (453), Expect(2) = 4e-060
Identities = 78/109 (71%), Positives = 93/109 (85%)
Frame = +2 / +2
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GPL+SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 92 EMGSGAGSFFKVLLKNFDVLSGPLVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 271
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
LFELTFA +IEW+P W YA+L CWLV+P+F+GAAYVY++FVRP F N
Sbjct: 272 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFAN 418
Score = 120 bits (257), Expect(3) = 2e-034
Identities = 63/101 (62%), Positives = 68/101 (67%)
Frame = -1 / -1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 405 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 226
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* GP RTSKFL TL+K P P
Sbjct: 225 ST*DLVSIALIDAYRG*TRLTKGPERTSKFLRRTLKKLPAP 103
Score = 103 bits (219), Expect(2) = 2e-023
Identities = 51/113 (45%), Positives = 71/113 (62%)
Frame = -3 / -3
Query: 421 VHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSE 242
V K HK+++NI ST E DQPA + + I P W PL+++ K LK+ D *+++PVS+
Sbjct: 418 VGKERSHKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLKECDH*IKNPVSK 239
Query: 241 PLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
PLLII F L C N I RI+K + P K++EVL ++LEE S P LC +
Sbjct: 238 PLLIINVRFSLNCPN*CIQRINKTNQRPRKNVEVLKKNLEEASSPRSHLCEKN 80
Score = 42.3 bits (86), Expect(2) = 4e-060
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 455 KKDVFSKPDDVLTAAEKYIEENGTSAFE 538
Score = 39.1 bits (79), Expect(3) = 2e-034
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -1
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 546 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 457
Score = 26.3 bits (51), Expect(2) = 2e-023
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -3 / -3
Query: 544 DELLKCFWSVLFNISLCS*QNIIRF 470
+ELLK S+LFN+ L S N+I F
Sbjct: 547 NELLKSRSSILFNVFLSSS*NVIWF 473
Score = 24.4 bits (47), Expect(3) = 2e-034
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = -3 / -3
Query: 463 LLISWNIPYVHYL 425
+L+SW+IPY++ L
Sbjct: 463 ILLSWDIPYINGL 425
>gb|BU873882.1|BU873882 Q061A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 555
Score = 209 bits (451), Expect(2) = 7e-060
Identities = 79/111 (71%), Positives = 95/111 (85%)
Frame = +2 / +1
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSFLKVL +NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 64 EMGSGTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 243
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W +AKL CWLV+P+F+GAAYVY++FVRP + N Q
Sbjct: 244 LFELTFAKLIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 396
Score = 122 bits (262), Expect(2) = 5e-034
Identities = 64/101 (63%), Positives = 71/101 (70%)
Frame = -1 / -2
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 377 GLTKFS*TYAAPLKYGTTNQQVKMSFANGQIGIHSMSLAKVSSKRVIME*RIQ*VSHCLS 198
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST FVSIAL EAYRG* ++GPARTSKF T +K P P
Sbjct: 197 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKKLPVP 75
Score = 100 bits (214), Expect(2) = 2e-024
Identities = 48/104 (46%), Positives = 67/104 (64%)
Frame = -3 / -1
Query: 403 HKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIY 224
HK++VN+ ST E DQPA + +L P W PL+ + K LK+SD +++PVS+PLLII
Sbjct: 372 HKVLVNVCSTTEVWNDQPAGQNELRKWPDWYPLNEFGKGELKESDHGIKNPVSKPLLIIN 193
Query: 223 RIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALC 92
FCL C N I*RI+K P K+++VL ++L + S P LC
Sbjct: 192 MRFCLDCPN*GI*RINKTNHRPSKNVKVLKKNL*KASSPRSHLC 61
Score = 42.3 bits (86), Expect(2) = 7e-060
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2 / +1
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVLSAAE+YIE+NG AFE
Sbjct: 427 KKDIFSKPDDVLSAAEKYIEENGTYAFE 510
Score = 42.3 bits (86), Expect(2) = 5e-034
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = -1 / -2
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAADRTSS L SF
Sbjct: 518 MSFSKA*VPFSSMYFSAADRTSSGLLKISF 429
Score = 31.8 bits (63), Expect(2) = 2e-024
Identities = 16/37 (43%), Positives = 20/37 (54%)
Frame = -3 / -1
Query: 580 CVPXXXXXXXLADELLKCFWSVLFNISLCS*QNIIRF 470
C+ L +ELLK +LFN+ LCS NII F
Sbjct: 555 CIAATPPGLILGNELLKSISPILFNVFLCSR*NIIWF 445
>gb|CA825212.1|CA825212 R55B12 two-month-old roots from clone 'Beaupre' Populus trichocarpa
x Populus deltoides cDNA 5', mRNA sequence
Length = 550
Score = 208 bits (449), Expect(2) = 1e-059
Identities = 77/111 (69%), Positives = 93/111 (83%)
Frame = +2 / +1
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 79 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 258
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W YA+L CWLV+P+F+GA YVY++FVRP F N Q
Sbjct: 259 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 411
Score = 118 bits (253), Expect(3) = 2e-033
Identities = 62/101 (61%), Positives = 68/101 (67%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 392 GLTKFS*TYVAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 213
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* +GP RTSKFL TL+K P P
Sbjct: 212 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKKLPVP 90
Score = 103 bits (219), Expect(2) = 1e-022
Identities = 53/117 (45%), Positives = 71/117 (60%)
Frame = -3 / -2
Query: 427 LAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPV 248
L V K HK+++NI ST E DQPA + + I P W PL+++ K LK+ D *V++PV
Sbjct: 411 LWVGKERSHKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLKECDH*VKNPV 232
Query: 247 SEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSSSR 77
S+PLLII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 231 SKPLLIINVRFSLDCPN*CIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKKQK 61
Score = 42.3 bits (86), Expect(2) = 1e-059
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +1
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 442 KKDVFSKPDDVLTAAEKYIEENGTSAFE 525
Score = 39.1 bits (79), Expect(3) = 2e-033
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 533 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 444
Score = 24.0 bits (46), Expect(2) = 1e-022
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / -2
Query: 544 DELLKCFWSVLFNISLCS*QNIIRF 470
+ELLK S+LF++ L S N+I F
Sbjct: 534 NELLKSRSSILFDVFLSSS*NVIWF 460
Score = 23.5 bits (45), Expect(3) = 2e-033
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 450 ILLSWDIPYI 421
>gb|CV246557.1|CV246557 WS01111.B21_B06 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_B06 3', mRNA sequence
Length = 767
Score = 210 bits (452), Expect(2) = 2e-059
Identities = 79/111 (71%), Positives = 95/111 (85%)
Frame = +2 / -1
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSFLKVL +NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 752 EMGSGTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 573
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W +AKL CWLV+P+F+GAAYVY++FVRP + N Q
Sbjct: 572 LFELTFAKVIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 420
Score = 125 bits (268), Expect(2) = 9e-034
Identities = 65/101 (64%), Positives = 72/101 (71%)
Frame = -1 / +1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T*AAPL G TNQQ+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 439 GLTKFS*T*AAPLKYGTTNQQVKMSFANGQIGIHSMTLAKVSSKRVIME*RIQ*VSHCLS 618
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST FVSIAL EAYRG* ++GPARTSKF T +K P P
Sbjct: 619 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKKLPVP 741
Score = 105 bits (225), Expect(2) = 3e-025
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = -3 / +3
Query: 403 HKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIY 224
HK++VN+ ST E +QPA + +LC P W PL+++ K LK+SD +++PVS+PLLII
Sbjct: 444 HKVLVNVSSTTEVWNNQPAGQNELCKWPDWYPLNDFGKGELKESDHGIKNPVSKPLLIIN 623
Query: 223 RIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALC 92
FCL C N I*RI+K P K+++VL ++L + S P LC
Sbjct: 624 MRFCLDCPN*GI*RINKTNHRPSKNVKVLKKNL*KASSPRSHLC 755
Score = 40.0 bits (81), Expect(2) = 2e-059
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / -1
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVLSAAE+YIE++G AFE
Sbjct: 389 KKDIFSKPDDVLSAAEKYIEEDGTYAFE 306
Score = 38.6 bits (78), Expect(2) = 9e-034
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A P S+Y SAADRTSS L SF
Sbjct: 298 MSFSKA*VPSSSMYFSAADRTSSGLLKISF 387
Score = 29.5 bits (58), Expect(2) = 3e-025
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3 / +3
Query: 580 CVPXXXXXXXLADELLKCFWSVLFNISLCS*QNIIRF 470
C+ L +ELLK +LFN+ LC N+I F
Sbjct: 261 CIAATPPGLILGNELLKSISPILFNVFLCGR*NVIWF 371
>gb|CK098245.1|CK098245 A009P39.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A009P39 5', mRNA sequence
Length = 575
Score = 205 bits (442), Expect(2) = 1e-058
Identities = 75/106 (70%), Positives = 91/106 (85%)
Frame = +2 / +2
Query: 110 SGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELT 289
+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELT
Sbjct: 5 TGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELT 184
Query: 290 FAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
FA +IEW+P W YA+L CWLV+P+F+GA YVY++FVRP F N Q
Sbjct: 185 FAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 322
Score = 120 bits (257), Expect(3) = 5e-034
Identities = 63/99 (63%), Positives = 68/99 (68%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T* APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 303 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 124
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDP 112
ST VSIAL EAYRG* +GP RTSKFL TL+K P
Sbjct: 123 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKKLP 7
Score = 98.2 bits (208), Expect(2) = 3e-021
Identities = 50/105 (47%), Positives = 67/105 (63%)
Frame = -3 / -2
Query: 427 LAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPV 248
L V K HK+++NI ST E DQPA + + I P W PL+++ K LK+ D *V++PV
Sbjct: 322 LRVGKERSHKILINISSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLKECDH*VKNPV 143
Query: 247 SEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERS 113
S+PLLII F L C N I RI+K P K++EVL ++LEE S
Sbjct: 142 SKPLLIINVRFSLNCPN*GIQRINKTNHRPRKNVEVLKKNLEEAS 8
Score = 42.3 bits (86), Expect(2) = 1e-058
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 353 KKDVFSKPDDVLTAAEKYIEENGTSAFE 436
Score = 39.1 bits (79), Expect(3) = 5e-034
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 444 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 355
Score = 24.0 bits (46), Expect(2) = 3e-021
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3 / -2
Query: 544 DELLKCFWSVLFNISLCS*QNIIRF 470
+ELLK S+LF++ L S N+I F
Sbjct: 445 NELLKSRSSILFDVFLSSS*NVIWF 371
Score = 23.5 bits (45), Expect(3) = 5e-034
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 361 ILLSWDIPYI 332
>gb|CK098220.1|CK098220 A008P12.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A008P12 5', mRNA sequence
Length = 547
Score = 199 bits (428), Expect(2) = 1e-056
Identities = 73/105 (69%), Positives = 89/105 (84%)
Frame = +2 / +1
Query: 113 GSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTF 292
G +KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELTF
Sbjct: 10 GRPIKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTF 189
Query: 293 APIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
A +IEW+P W YA+L CWLV+P+F+GA YVY++FVRP F N Q
Sbjct: 190 AKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 324
Score = 116 bits (247), Expect(3) = 1e-032
Identities = 61/95 (64%), Positives = 65/95 (68%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T* APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 305 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 126
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTL 124
ST VSIAL EAYRG* +GP RTSKFL TL
Sbjct: 125 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTL 21
Score = 42.3 bits (86), Expect(2) = 1e-056
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +1
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 355 KKDVFSKPDDVLTAAEKYIEENGTSAFE 438
Score = 39.1 bits (79), Expect(3) = 1e-032
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 446 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 357
Score = 23.5 bits (45), Expect(3) = 1e-032
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 363 ILLSWDIPYI 334
>gb|AI161908.1|AI161908 A009P39U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 505
Score = 197 bits (425), Expect(2) = 1e-055
Identities = 72/101 (71%), Positives = 87/101 (86%)
Frame = +2 / +3
Query: 125 KVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPII 304
KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELTFA +I
Sbjct: 3 KVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVI 182
Query: 305 EWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
EW+P W YA+L CWLV+P+F+GA YVY++FVRP F N Q
Sbjct: 183 EWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 305
Score = 116 bits (247), Expect(3) = 4e-030
Identities = 61/95 (64%), Positives = 65/95 (68%)
Frame = -1 / -1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T* APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 286 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 107
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTL 124
ST VSIAL EAYRG* +GP RTSKFL TL
Sbjct: 106 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTL 2
Score = 40.0 bits (81), Expect(2) = 1e-055
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2 / +3
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAF 532
+ + K DDVL+AAE+YIE+NG AF
Sbjct: 336 KKDVFSKPDDVLTAAEKYIEENGTSAF 416
Score = 30.4 bits (60), Expect(3) = 4e-030
Identities = 15/25 (60%), Positives = 16/25 (64%)
Frame = -1 / -1
Query: 528 ASGPFCSIYLSAADRTSSDLPSFSF 454
A PF S+Y SAA RTSS L SF
Sbjct: 412 AEVPFSSMYFSAAVRTSSGLLKTSF 338
Score = 23.5 bits (45), Expect(3) = 4e-030
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 344 ILLSWDIPYI 315
>gb|DT475725.1|DT475725 WS0128.BR_A07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_A07 5', mRNA sequence
Length = 574
Score = 210 bits (453), Expect(2) = 2e-055
Identities = 78/111 (70%), Positives = 94/111 (84%)
Frame = +2 / +1
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 166 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 345
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W YA+L CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 346 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 498
Score = 120 bits (257), Expect(2) = 9e-028
Identities = 63/101 (62%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 479 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 300
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* +GP RTSKFL TL+K P P
Sbjct: 299 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLRRTLKKLPVP 177
Score = 101 bits (215), Expect = 8e-021
Identities = 52/115 (45%), Positives = 71/115 (61%)
Frame = -3 / -2
Query: 427 LAVHKHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPV 248
L V K HK+++NI ST E DQPA + + I P W PL+++ K L++ D *V++PV
Sbjct: 498 LWVGKERSHKILINICSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLEECDH*VKNPV 319
Query: 247 SEPLLIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
S+PLLII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 318 SKPLLIINVRFSLNCPN*CIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 154
Score = 26.7 bits (52), Expect(2) = 2e-055
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +2 / +1
Query: 422 RQIVNIWYIPRNEKLGKSDD 481
+Q +NIWY+PR + + D
Sbjct: 496 QQTLNIWYVPRKKDVFSKPD 555
Score = 23.5 bits (45), Expect(2) = 9e-028
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 537 ILLSWDIPYI 508
>gb|CB239680.1|CB239680 RSH15C07 two-month-old roots from clone 'Beaupre' grown for 19 days
under restricted irrigation Populus trichocarpa x
Populus deltoides cDNA 5', mRNA sequence
Length = 579
Score = 193 bits (415), Expect(2) = 6e-055
Identities = 70/108 (64%), Positives = 89/108 (82%)
Frame = +2 / +3
Query: 104 MGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
+G + + +NFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFE
Sbjct: 117 LGLEASSRFFLRNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFE 296
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LTFA +IEW+P W YA+L CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 297 LTFAKVIEWIPIWPYARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 440
Score = 114 bits (244), Expect(3) = 3e-032
Identities = 60/101 (59%), Positives = 66/101 (65%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 421 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 242
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL +AYRG* +GP RTSKFL L + P
Sbjct: 241 ST*DLVSIALIDAYRG*TRLTTGPERTSKFLKKNLEEASSP 119
Score = 42.3 bits (86), Expect(2) = 6e-055
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +3
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 471 KKDVFSKPDDVLTAAEKYIEENGTSAFE 554
Score = 39.1 bits (79), Expect(3) = 3e-032
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 562 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 473
Score = 23.5 bits (45), Expect(3) = 3e-032
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 479 ILLSWDIPYI 450
>gb|DT489931.1|DT489931 WS02543.B21_J08 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02543_J08 3', mRNA sequence
Length = 819
Score = 192 bits (414), Expect(2) = 8e-055
Identities = 69/97 (71%), Positives = 85/97 (87%)
Frame = +2 / -2
Query: 137 KNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLP 316
KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELTFA +IEW+P
Sbjct: 815 KNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIP 636
Query: 317 FWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
W YA+L CWLV+P+F+GA+YVY++FVRP F N Q
Sbjct: 635 IWPYARLILTCWLVIPYFSGASYVYENFVRPFFANPQ 525
Score = 108 bits (231), Expect(3) = 1e-030
Identities = 57/91 (62%), Positives = 62/91 (68%)
Frame = -1 / +1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 544 GLTKFS*TYEAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 723
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFL 136
ST VSIAL +AYRG* +GP RTSKFL
Sbjct: 724 ST*DLVSIALIDAYRG*TRLTTGPERTSKFL 816
Score = 42.3 bits (86), Expect(2) = 8e-055
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / -2
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 494 KKDVFSKPDDVLTAAEKYIEENGTSAFE 411
Score = 39.1 bits (79), Expect(3) = 1e-030
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 403 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 492
Score = 23.5 bits (45), Expect(3) = 1e-030
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 486 ILLSWDIPYI 515
>gb|AI162294.1|AI162294 A015P38U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 566
Score = 198 bits (427), Expect(3) = 4e-054
Identities = 73/104 (70%), Positives = 89/104 (85%)
Frame = +2 / +1
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 67 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 246
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVR 406
LFELTFA +IEW+P W YA+L CWLV+P+F+GA YVY++FVR
Sbjct: 247 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVR 378
Score = 120 bits (257), Expect(3) = 5e-029
Identities = 63/99 (63%), Positives = 68/99 (68%)
Frame = -1 / -1
Query: 402 TKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SST 223
TK+S*T* APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC SST
Sbjct: 374 TKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLSST 195
Query: 222 GFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
VSIAL EAYRG* +GP RTSKFL TL+K P P
Sbjct: 194 *DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKKLPVP 78
Score = 103 bits (219), Expect = 2e-021
Identities = 50/107 (46%), Positives = 68/107 (63%)
Frame = -3 / -3
Query: 403 HKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIY 224
HK+++NI ST E DQPA + + I P W PL+++ K LK+ D *V++PVS+PLLII
Sbjct: 375 HKILINISSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLKECDH*VKNPVSKPLLIIN 196
Query: 223 RIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 195 VRFSLNCPN*GIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 55
Score = 26.7 bits (52), Expect(3) = 4e-054
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = +2 / +2
Query: 470 KSDDVLSAAERYIEQ 514
K DDVL+AAE+Y E+
Sbjct: 446 KPDDVLTAAEKYTER 490
Score = 25.8 bits (50), Expect(3) = 4e-054
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +3
Query: 422 RQIVNIWYIPRNE 460
+Q +NIWY+PR +
Sbjct: 396 QQTLNIWYVPRKK 434
Score = 23.1 bits (44), Expect(3) = 5e-029
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = -1 / -3
Query: 510 SIYLSAADRTSSDL 469
S+Y SAA RTSS L
Sbjct: 486 SVYFSAAVRTSSGL 445
Score = 22.6 bits (43), Expect(3) = 5e-029
Identities = 6/9 (66%), Positives = 9/9 (100%)
Frame = -3 / -1
Query: 460 LISWNIPYV 434
L+SW+IPY+
Sbjct: 434 LLSWDIPYI 408
>gb|CF231938.1|CF231938 PtaC0027F12F1212 Poplar cDNA library from cambial zone Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 571
Score = 204 bits (440), Expect(2) = 2e-053
Identities = 75/107 (70%), Positives = 91/107 (85%)
Frame = +2 / +1
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 103 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 282
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMF 415
LFELTFA +IEW+P W YA+L CWLV+P+F+GA YVY++FVRP F
Sbjct: 283 LFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFF 423
Score = 122 bits (261), Expect(2) = 3e-028
Identities = 64/101 (63%), Positives = 69/101 (68%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T* APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 416 GLTKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 237
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST VSIAL EAYRG* +GP RTSKFL TL+K P P
Sbjct: 236 ST*DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKKLPVP 114
Score = 103 bits (220), Expect = 2e-021
Identities = 51/111 (45%), Positives = 69/111 (62%)
Frame = -3 / -2
Query: 415 KHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPL 236
K HK+++NI ST E DQPA + + I P W PL+++ K LK+ D *V++PVS+PL
Sbjct: 423 KERSHKILINISSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKLKECDH*VKNPVSKPL 244
Query: 235 LIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
LII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 243 LIINVRFSLNCPN*GIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 91
Score = 25.8 bits (50), Expect(2) = 2e-053
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2 / +2
Query: 422 RQIVNIWYIPRNE 460
+Q +NIWY+PR +
Sbjct: 434 QQTLNIWYVPRKK 472
Score = 23.5 bits (45), Expect(2) = 3e-028
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 475 ILLSWDIPYI 446
>gb|DT499923.1|DT499923 WS9991.BR_L17 PT-P-FL-A-2 Populus trichocarpa cDNA clone
WS01111_B06 5', mRNA sequence
Length = 483
Score = 208 bits (449), Expect = 4e-053
Identities = 78/109 (71%), Positives = 94/109 (86%)
Frame = +2 / +3
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSFLKVL +NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 156 EMGSGTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 335
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVN 421
LFELTFA +IEW+P W +AKL CWLV+P+F+GAAYVY++FVRP + N
Sbjct: 336 LFELTFAKVIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYAN 482
Score = 125 bits (268), Expect = 4e-028
Identities = 65/101 (64%), Positives = 72/101 (71%)
Frame = -1 / -3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T*AAPL G TNQQ+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 469 GLTKFS*T*AAPLKYGTTNQQVKMSFANGQIGIHSMTLAKVSSKRVIME*RIQ*VSHCLS 290
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST FVSIAL EAYRG* ++GPARTSKF T +K P P
Sbjct: 289 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKKLPVP 167
Score = 105 bits (225), Expect = 4e-022
Identities = 48/104 (46%), Positives = 69/104 (66%)
Frame = -3 / -2
Query: 403 HKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPLLIIY 224
HK++VN+ ST E +QPA + +LC P W PL+++ K LK+SD +++PVS+PLLII
Sbjct: 464 HKVLVNVSSTTEVWNNQPAGQNELCKWPDWYPLNDFGKGELKESDHGIKNPVSKPLLIIN 285
Query: 223 RIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALC 92
FCL C N I*RI+K P K+++VL ++L + S P LC
Sbjct: 284 MRFCLDCPN*GI*RINKTNHRPSKNVKVLKKNL*KASSPRSHLC 153
>gb|CV236388.1|CV236388 WS01223.B21_O18 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01223_O18 3', mRNA sequence
Length = 818
Score = 186 bits (400), Expect(2) = 6e-053
Identities = 67/94 (71%), Positives = 82/94 (87%)
Frame = +2 / -1
Query: 146 DVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWS 325
DVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELTFA +IEW+P W
Sbjct: 818 DVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWP 639
Query: 326 YAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
YA+L CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 638 YARLILTCWLVIPYFSGAAYVYENFVRPFFANPQ 537
Score = 102 bits (217), Expect(3) = 1e-028
Identities = 54/87 (62%), Positives = 59/87 (67%)
Frame = -1 / +1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 556 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 735
Query: 228 STGFFVSIALTEAYRG*ASDMSGPART 148
ST VSIAL +AYRG* +GP RT
Sbjct: 736 ST*DLVSIALIDAYRG*TRLTTGPERT 816
Score = 42.3 bits (86), Expect(2) = 6e-053
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / -1
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 506 KKDVFSKPDDVLTAAEKYIEENGTSAFE 423
Score = 39.1 bits (79), Expect(3) = 1e-028
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / +1
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 415 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 504
Score = 23.5 bits (45), Expect(3) = 1e-028
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / +3
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 498 ILLSWDIPYI 527
>gb|BU871910.1|BU871910 Q036A01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 407
Score = 203 bits (438), Expect = 1e-051
Identities = 77/111 (69%), Positives = 94/111 (84%)
Frame = +2 / +3
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSFLKVL +NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 60 EMGSGTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 239
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LFELTFA +IEW+P W +AKL CWLV+P+F+GAAYV+++ VRP + N Q
Sbjct: 240 LFELTFAKLIEWIPIWPFAKLILTCWLVVPYFSGAAYVHENSVRPFYANPQ 392
Score = 121 bits (258), Expect = 1e-026
Identities = 63/101 (62%), Positives = 71/101 (70%)
Frame = -1 / -2
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G T++S*T AAPL G TNQQ+K SFA Q G HS+ AKVSS +VI E Q*VSHC S
Sbjct: 373 GLTEFS*TYAAPLKYGTTNQQVKMSFANGQIGIHSMSLAKVSSKRVIME*RIQ*VSHCLS 194
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
ST FVSIAL EAYRG* ++GPARTSKF T +K P P
Sbjct: 193 ST*DFVSIALIEAYRG*TRLITGPARTSKFSRRTFKKLPVP 71
>gb|BU820620.1|BU820620 UB12CPB07 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 504
Score = 177 bits (381), Expect(3) = 2e-050
Identities = 63/90 (70%), Positives = 77/90 (85%)
Frame = +2 / +2
Query: 158 GPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKL 337
GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELTFA +IEW+P W YA+L
Sbjct: 29 GPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWPYARL 208
Query: 338 FFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
CWLV+P+F+GA YVY++FVRP F N Q
Sbjct: 209 ILTCWLVIPYFSGATYVYENFVRPFFANPQ 298
Score = 99.1 bits (210), Expect(3) = 1e-027
Identities = 53/91 (58%), Positives = 59/91 (64%)
Frame = -1 / -1
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 279 GLTKFS*TYVAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 100
Query: 228 STGFFVSIALTEAYRG*ASDMSGPARTSKFL 136
ST VSIAL EAYRG* +GP + + L
Sbjct: 99 ST*DLVSIALIEAYRG*TRLTTGPRKNIEVL 7
Score = 42.3 bits (86), Expect(3) = 2e-050
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / +2
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 329 KKDVFSKPDDVLTAAEKYIEENGTSAFE 412
Score = 39.1 bits (79), Expect(3) = 1e-027
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -1
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 420 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 331
Score = 23.5 bits (45), Expect(3) = 1e-027
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -3
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 337 ILLSWDIPYI 308
Score = 21.7 bits (41), Expect(3) = 2e-050
Identities = 8/10 (80%), Positives = 9/10 (90%)
Frame = +2 / +1
Query: 131 LAKNFDVLAG 160
L KNFDVL+G
Sbjct: 1 LLKNFDVLSG 30
>gb|BI128260.1|BI128260 G073P32Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 421
Score = 195 bits (421), Expect = 3e-049
Identities = 72/104 (69%), Positives = 88/104 (84%)
Frame = +2 / +3
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 93 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 272
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVR 406
L ELTFA +IEW+P W YA+L CWLV+P+F+GA YVY++FVR
Sbjct: 273 LLELTFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVR 404
Score = 120 bits (257), Expect = 1e-026
Identities = 63/99 (63%), Positives = 68/99 (68%)
Frame = -1 / -1
Query: 402 TKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*SST 223
TK+S*T* APL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC SST
Sbjct: 400 TKFS*T*VAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLSST 221
Query: 222 GFFVSIALTEAYRG*ASDMSGPARTSKFLASTLRKDPDP 106
VSIAL EAYRG* +GP RTSKFL TL+K P P
Sbjct: 220 *DLVSIALIEAYRG*TRLTTGPERTSKFLRRTLKKLPVP 104
Score = 103 bits (219), Expect = 2e-021
Identities = 51/111 (45%), Positives = 69/111 (62%)
Frame = -3 / -3
Query: 415 KHWPHKMVVNIGSTIEPRQDQPAVKEQLCI*PKWKPLDNWSKS*LKQSDK*VQHPVSEPL 236
K PHK+++NI ST E DQPA + + I P W PL+++ K L + D *V++PVS+PL
Sbjct: 413 KKGPHKILINISSTTEVWNDQPAGQNEPRIWPDWYPLNDFGKGKL*ECDH*VKNPVSKPL 234
Query: 235 LIIYRIFCLYCSNRSI*RISK*YEWPGKDIEVLGQHLEERSGPHLALCSSS 83
LII F L C N I RI+K P K++EVL ++LEE S P LC +
Sbjct: 233 LIINVRFSLNCPN*GIQRINKTNHRPRKNVEVLKKNLEEASSPRSHLCEKN 81
>gb|CV238776.1|CV238776 WS0128.B21.1_A07 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0128_A07 3', mRNA sequence
Length = 661
Score = 172 bits (371), Expect(2) = 6e-049
Identities = 62/87 (71%), Positives = 75/87 (86%)
Frame = +2 / -1
Query: 167 ISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFFN 346
+SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELTFA +IEW+P W YA+L
Sbjct: 661 VSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAKVIEWIPIWPYARLILT 482
Query: 347 CWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
CWLV+P+F+GAAYVY++FVRP F N Q
Sbjct: 481 CWLVIPYFSGAAYVYENFVRPFFANPQ 401
Score = 94.5 bits (200), Expect(3) = 2e-026
Identities = 50/77 (64%), Positives = 54/77 (70%)
Frame = -1 / +3
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVINEYNTQ*VSHC*S 229
G TK+S*T AAPL G TNQQ+K S AY Q G HS+ AKVSS VI E Q*VSHC S
Sbjct: 420 GLTKFS*TYAAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVIIE*RIQ*VSHCLS 599
Query: 228 STGFFVSIALTEAYRG* 178
ST VSIAL +AYRG*
Sbjct: 600 ST*DLVSIALIDAYRG* 650
Score = 42.3 bits (86), Expect(2) = 6e-049
Identities = 16/28 (57%), Positives = 21/28 (75%)
Frame = +2 / -1
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAE+YIE+NG AFE
Sbjct: 370 KKDVFSKPDDVLTAAEKYIEENGTSAFE 287
Score = 39.1 bits (79), Expect(3) = 2e-026
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / +3
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+Y SAA RTSS L SF
Sbjct: 279 MSFSKAEVPFSSMYFSAAVRTSSGLLKTSF 368
Score = 23.5 bits (45), Expect(3) = 2e-026
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / +2
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 362 ILLSWDIPYI 391
>gb|AI164764.1|AI164764 A068P40U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 424
Score = 159 bits (341), Expect(3) = 9e-047
Identities = 58/79 (73%), Positives = 68/79 (86%)
Frame = +2 / +1
Query: 119 FLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAP 298
F KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS ITLFELTFA
Sbjct: 1 FFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMITLFELTFAK 180
Query: 299 IIEWLPFWSYAKLFFNCWL 355
+IEW+P W YA+L CWL
Sbjct: 181 VIEWIPIWPYARLILTCWL 237
Score = 43.2 bits (88), Expect(3) = 9e-047
Identities = 15/29 (51%), Positives = 22/29 (75%)
Frame = +2 / +3
Query: 341 FNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
F+ + +P+F+GA YVY++FVRP F N Q
Sbjct: 222 FDLLVGIPYFSGATYVYENFVRPFFANPQ 308
Score = 24.0 bits (46), Expect(3) = 9e-047
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = +2 / +1
Query: 437 IWYIPRNEKLGKSDDVLSAAERYIEQNG 520
I+ +P+ E + +AAE+ IE+NG
Sbjct: 319 IYGMPKKEGCFSNQMTSTAAEKXIEENG 402
>gb|BU824497.1|BU824497 UB65DPA03 Populus tremula cambium cDNA library Populus tremula cDNA
5 prime, mRNA sequence
Length = 624
Score = 101 bits (215), Expect(4) = 2e-046
Identities = 35/53 (66%), Positives = 43/53 (81%)
Frame = +2 / +1
Query: 269 ITLFELTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
ITLFELTFA +IEW+P W YA+L CWLV+P+F+GA YVY++FVRP F N Q
Sbjct: 280 ITLFELTFAKVIEWIPIWPYARLILTCWLVIPYFSGATYVYENFVRPFFANPQ 438
Score = 58.8 bits (122), Expect(5) = 1e-022
Identities = 29/47 (61%), Positives = 32/47 (68%)
Frame = -1 / -2
Query: 408 GRTKWS*T*AAPLNQGKTNQQLKNSFAYDQNGSHSIIGAKVSSNKVI 268
G TK+S*T APL G TNQQ+K S AY Q G HS+ AKVSS VI
Sbjct: 419 GLTKFS*TYVAPLKYGMTNQQVKMSLAYGQIGIHSMTLAKVSSKSVI 279
Score = 53.8 bits (111), Expect(4) = 2e-046
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2 / +1
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPL 187
E G+GSF KVL KNFDVL+GP++SL YPL
Sbjct: 103 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPL 195
Score = 44.6 bits (91), Expect(4) = 2e-046
Identities = 14/20 (70%), Positives = 19/20 (95%)
Frame = +2 / +3
Query: 206 IETKNPVDDQQWLTYWVLYS 265
++TK+ VDD+QWLTYW+LYS
Sbjct: 216 LQTKSHVDDKQWLTYWILYS 275
Score = 43.2 bits (88), Expect(4) = 2e-046
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2 / +1
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVL+AAERYIE+NG AFE
Sbjct: 469 KKDVFSKPDDVLTAAERYIEENGTTAFE 552
Score = 37.3 bits (75), Expect(5) = 1e-022
Identities = 19/30 (63%), Positives = 20/30 (66%)
Frame = -1 / -2
Query: 543 MSFSNASGPFCSIYLSAADRTSSDLPSFSF 454
MSFS A PF S+YLSAA TSS L SF
Sbjct: 560 MSFSKAVVPFSSMYLSAAVSTSSGLLKTSF 471
Score = 34.5 bits (69), Expect(5) = 1e-022
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -1 / -2
Query: 186 RG*ASDMSGPARTSKFLASTLRKDPDP 106
RG* +GP RTSKFL TL+K P P
Sbjct: 194 RG*TRLTTGPERTSKFLRRTLKKLPVP 114
Score = 24.0 bits (46), Expect(5) = 1e-022
Identities = 10/13 (76%), Positives = 13/13 (100%)
Frame = -3 / -2
Query: 265 *VQHPVSEPLLII 227
*V++PVS+PLLII
Sbjct: 275 *VKNPVSKPLLII 237
Score = 23.5 bits (45), Expect(5) = 1e-022
Identities = 6/10 (60%), Positives = 10/10 (100%)
Frame = -3 / -1
Query: 463 LLISWNIPYV 434
+L+SW+IPY+
Sbjct: 477 ILLSWDIPYI 448
>gb|CK099512.1|CK099512 A071P32.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A071P32 5', mRNA sequence
Length = 384
Score = 171 bits (368), Expect = 7e-042
Identities = 65/91 (71%), Positives = 77/91 (84%)
Frame = +2 / +3
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSFLKVL +NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 111 EMGSGTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 290
Query: 275 LFELTFAPIIEWLPFWSYAKLFFNCWLVLPW 367
LFELTFA +IEW+P W +AKL CWL +P+
Sbjct: 291 LFELTFAKLIEWIPIWPFAKLILTCWLGVPY 383
>gb|CK088432.1|CK088432 A052P67.3pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A052P67 3', mRNA sequence
Length = 663
Score = 89.5 bits (189), Expect(3) = 1e-038
Identities = 30/48 (62%), Positives = 39/48 (81%)
Frame = +2 / -2
Query: 284 LTFAPIIEWLPFWSYAKLFFNCWLVLPWFNGAAYVYDHFVRPMFVNRQ 427
LTFA +IEW+P W +AKL CWLV+P+F+GAAYVY++FVRP + N Q
Sbjct: 569 LTFAKLIEWIPIWPFAKLILTCWLVVPYFSGAAYVYENFVRPFYANPQ 426
Score = 67.0 bits (140), Expect(3) = 1e-038
Identities = 25/31 (80%), Positives = 29/31 (93%)
Frame = +2 / -1
Query: 191 ASVRAIETKNPVDDQQWLTYWVLYSFITLFE 283
AS+RAIETK+ VDD+QWLTYW+LYS ITLFE
Sbjct: 663 ASIRAIETKSHVDDKQWLTYWILYSMITLFE 571
Score = 42.3 bits (86), Expect(3) = 1e-038
Identities = 17/28 (60%), Positives = 21/28 (75%)
Frame = +2 / -2
Query: 452 RNEKLGKSDDVLSAAERYIEQNGPEAFE 535
+ + K DDVLSAAE+YIE+NG AFE
Sbjct: 395 KKDIFSKPDDVLSAAEKYIEENGTYAFE 312
>gb|CK116853.1|CK116853 B018P72 Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone B018P72 5', mRNA sequence
Length = 482
Score = 149 bits (319), Expect(2) = 8e-036
Identities = 56/76 (73%), Positives = 66/76 (86%)
Frame = +2 / +3
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSF KVL KNFDVL+GP++SL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 78 EMGSGTGSFFKVLLKNFDVLSGPVVSLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 257
Query: 275 LFELTFAPIIEWLPFW 322
LFELTFA +IEW+P W
Sbjct: 258 LFELTFAKVIEWIPIW 305
Score = 22.1 bits (42), Expect(2) = 8e-036
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +2 / +2
Query: 323 SYAKLFFNCWL 355
+YA+L CWL
Sbjct: 305 AYARLILTCWL 337
>gb|AI164945.1|AI164945 A071P32U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 342
Score = 145 bits (311), Expect(2) = 4e-034
Identities = 57/74 (77%), Positives = 66/74 (89%)
Frame = +2 / +2
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFIT 274
E G+GSFLKVL +NFDVLAGP+ISL YPLYAS+RAIETK+ VDD+QWLTYW+LYS IT
Sbjct: 68 EMGSGTGSFLKVLLENFDVLAGPVISLVYPLYASIRAIETKSHVDDKQWLTYWILYSMIT 247
Query: 275 LFELTFAPIIEWLP 316
LFELTFA +IEW+P
Sbjct: 248 LFELTFAKLIEWIP 289
Score = 21.7 bits (41), Expect(2) = 4e-034
Identities = 5/15 (33%), Positives = 10/15 (66%)
Frame = +2 / +2
Query: 326 YAKLFFNCWLVLPWF 370
+ + +F+CW P+F
Sbjct: 296 HLRSYFDCWXAGPYF 340
>gb|CF228071.1|CF228071 PtaXM0008D2D0208 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 681
Score = 126 bits (270), Expect = 2e-028
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +2 / +2
Query: 152 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYA 331
++GP++ L YPLYASV AIE+ + DD+QWL YW+LYSF+TL E+ ++EW+P W
Sbjct: 149 ISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSLLEWIPIWYSL 328
Query: 332 KLFFNCWLVLPWFNGAAYVYDHFVR 406
KL WLVLP F GAA+VY+ +VR
Sbjct: 329 KLVLAAWLVLPQFKGAAFVYERYVR 403
>gb|DT481964.1|DT481964 WS02533.BR_H16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_H16 5', mRNA sequence
Length = 731
Score = 126 bits (270), Expect = 2e-028
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +2 / -1
Query: 152 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYA 331
++GP++ L YPLYASV AIE+ + DD+QWL YW+LYSF+TL E+ ++EW+P W
Sbjct: 602 ISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSLLEWIPIWYSL 423
Query: 332 KLFFNCWLVLPWFNGAAYVYDHFVR 406
KL WLVLP F GAA+VY+ +VR
Sbjct: 422 KLVLAAWLVLPQFKGAAFVYERYVR 348
>gb|DT487357.1|DT487357 WS02533.B21_H16 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02533_H16 3', mRNA sequence
Length = 745
Score = 126 bits (270), Expect = 2e-028
Identities = 46/85 (54%), Positives = 62/85 (72%)
Frame = +2 / +3
Query: 152 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYA 331
++GP++ L YPLYASV AIE+ + DD+QWL YW+LYSF+TL E+ ++EW+P W
Sbjct: 144 ISGPVLMLLYPLYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSLLEWIPIWYSL 323
Query: 332 KLFFNCWLVLPWFNGAAYVYDHFVR 406
KL WLVLP F GAA+VY+ +VR
Sbjct: 324 KLVLAAWLVLPQFKGAAFVYERYVR 398
>gb|CF234811.1|CF234811 PtaJXT0015D8D0808 Poplar cDNA library from young tension xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 752
Score = 120 bits (256), Expect = 2e-026
Identities = 45/85 (52%), Positives = 61/85 (71%)
Frame = +2 / +3
Query: 152 LAGPLISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYA 331
++GP++ L YPLYASV AIE+ + DD+QWL Y +LYSF+TL E+ ++EW+P W
Sbjct: 150 ISGPVLMLLYPLYASVVAIESPSREDDKQWLAYRILYSFLTLTEMLLQSLLEWIPIWYSL 329
Query: 332 KLFFNCWLVLPWFNGAAYVYDHFVR 406
KL WLVLP F GAA+VY+ +VR
Sbjct: 330 KLVLAAWLVLPQFKGAAFVYERYVR 404
>gb|AI162392.1|AI162392 A016P78U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 395
Score = 70.7 bits (148), Expect(2) = 4e-026
Identities = 24/34 (70%), Positives = 28/34 (82%)
Frame = +2 / +2
Query: 239 WLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLF 340
WLTYW+LYS ITLFELTFA +IEW+P W +A F
Sbjct: 275 WLTYWILYSMITLFELTFAKLIEWIPIWPFATPF 376
Score = 68.0 bits (142), Expect(2) = 4e-026
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +2 / +2
Query: 95 ESKMGSGSFLKVLAKNFDVLAGPLISLAYPLYASVRA 205
E G+GSFLKVL +NFDVLAGP+ISL YPLYAS+RA
Sbjct: 134 EMGSGTGSFLKVLLENFDVLAGPVISLVYPLYASIRA 244
>gb|CV230612.1|CV230612 WS0192.B21_B13 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0192_B13 3', mRNA sequence
Length = 688
Score = 110 bits (235), Expect = 1e-023
Identities = 43/81 (53%), Positives = 55/81 (67%)
Frame = +2 / +3
Query: 164 LISLAYPLYASVRAIETKNPVDDQQWLTYWVLYSFITLFELTFAPIIEWLPFWSYAKLFF 343
LI L YASV AIE+ + DD+QWL YW+LYSF+TL E+ ++EW+P W KL
Sbjct: 117 LIVLLVNRYASVVAIESPSREDDKQWLAYWILYSFLTLTEMLLQSLLEWIPIWYSLKLVL 296
Query: 344 NCWLVLPWFNGAAYVYDHFVR 406
WLVLP F GAA+VY+ +VR
Sbjct: 297 AAWLVLPQFKGAAFVYERYVR 359
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 503,514,623
Number of Sequences: 369679
Number of extensions: 7144638
Number of successful extensions: 45082
Number of sequences better than 1.0e-020: 44
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 14173710894
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)