TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2643556.2.1
(1354 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins ... 144 2e-068
gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library... 137 2e-061
gb|DN491294.1|DN491294 UM83TF04.3pR Populus female catkins ... 144 3e-057
gb|BU882965.1|BU882965 UM84TE12 Populus flower cDNA library... 165 4e-052
gb|BU883614.1|BU883614 UM95TA01 Populus flower cDNA library... 161 3e-049
gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Popul... 162 9e-041
gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Popul... 162 9e-041
gb|BU896825.1|BU896825 X046D07 Populus wood cDNA library Po... 131 2e-040
gb|BU896348.1|BU896348 X039D07 Populus wood cDNA library Po... 130 3e-040
gb|CA924237.1|CA924237 MTU7CL.P3.D05 Aspen leaf cDNA Librar... 125 6e-040
gb|AI161962.1|AI161962 A010P29U Hybrid aspen plasmid librar... 130 1e-039
gb|AF052570.1|AF052570 Populus balsamifera subsp. trichocar... 131 2e-039
gb|AF052571.1|AF052571 Populus balsamifera subsp. trichocar... 135 5e-039
gb|CV245843.1|CV245843 WS0259.B21_I15 PT-MB-N-A-15 Populus ... 120 1e-038
gb|BU878009.1|BU878009 V042A05 Populus flower cDNA library ... 160 3e-038
gb|DT489131.1|DT489131 WS02538.B21_G02 PT-MB-N-A-15 Populus... 106 2e-037
gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii... 108 3e-037
gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds 104 2e-036
gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library ... 106 2e-036
gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETA... 102 8e-036
gb|DN484014.1|DN484014 PSO205E04 Populus tomentiglandulosa ... 115 8e-036
gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii... 108 8e-036
gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETA... 106 5e-035
gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library ... 108 1e-034
gb|AY515153.1| Populus deltoides APETALA-like protein AP1 m... 102 2e-034
gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds 103 2e-034
gb|CK096310.1|CK096310 UB10CPE08.3pR Populus active cambium... 102 4e-033
gb|CV256507.1|CV256507 WS0244.B21_A19 PTxD-ICC-N-A-14 Popul... 141 8e-033
gb|DT515243.1|DT515243 WS02427.B21_A17 PTxD-ICC-N-A-14 Popu... 141 8e-033
gb|DT520688.1|DT520688 WS02448.B21_E04 PTxD-ICC-N-A-14 Popu... 141 8e-033
gb|DT517651.1|DT517651 WS02434.B21_O16 PTxD-ICC-N-A-14 Popu... 138 6e-032
gb|AY359607.1| Populus yunnanensis sex male AGAMOUS (AG2) g... 135 5e-031
gb|AY359609.1| Populus tomentosa sex female AGAMOUS (AG2) g... 135 5e-031
gb|AY615965.1| Populus balsamifera subsp. trichocarpa APETA... 104 1e-030
gb|AY359611.1| Populus tomentosa sex male AGAMOUS (AG2) gen... 133 3e-030
gb|AY359612.1| Populus tomentosa sex male AGAMOUS (AG1) gen... 133 3e-030
gb|CA925124.1|CA925124 MTU7TL.P13.H01 Aspen leaf cDNA Libra... 132 5e-030
gb|CV231279.1|CV231279 WS0194.B21_A22 PT-DX-N-A-10 Populus ... 132 5e-030
gb|AF377868.1| Populus tremuloides MADS-box protein PTM5 mR... 132 5e-030
gb|BU876515.1|BU876515 V021F11 Populus flower cDNA library ... 132 6e-030
gb|CV242362.1|CV242362 WS02514.B21.1_N17 PT-MB-N-A-15 Popul... 132 6e-030
gb|DT472398.1|DT472398 WS01226.BR.1_F17 PT-GT-FL-A-3 Populu... 132 6e-030
gb|DT524337.1|DT524337 WS02042.C21.1_F18 PTxN-IB-N-A-11 Pop... 132 6e-030
gb|AY359608.1| Populus yunnanensis sex male AGAMOUS (AG1) g... 132 6e-030
gb|AY359610.1| Populus tomentosa sex female AGAMOUS (AG1) g... 132 6e-030
gb|CK098276.1|CK098276 A010P29.5pR Hybrid aspen plasmid lib... 130 2e-029
gb|CA924456.1|CA924456 MTU7CL.P5.H08 Aspen leaf cDNA Librar... 129 3e-029
gb|BI137078.1|BI137078 F079P74Y Populus flower cDNA library... 82 1e-028
gb|BI136216.1|BI136216 F065P15Y Populus flower cDNA library... 82 1e-028
gb|BI137178.1|BI137178 F081P53Y Populus flower cDNA library... 82 1e-028
gb|BU828831.1|BU828831 K029P51P Populus apical shoot cDNA l... 127 2e-028
gb|BU871261.1|BU871261 Q028F06 Populus flower cDNA library ... 126 4e-028
gb|BU891075.1|BU891075 P045E12 Populus petioles cDNA librar... 126 4e-028
gb|DT514239.1|DT514239 WS02424.B21_E10 PTxD-ICC-N-A-14 Popu... 126 4e-028
gb|BU875666.1|BU875666 V009G10 Populus flower cDNA library ... 124 1e-027
gb|BI137201.1|BI137201 F082P13Y Populus flower cDNA library... 78 2e-027
gb|DT518766.1|DT518766 WS02439.B21_D01 PTxD-ICC-N-A-14 Popu... 119 3e-026
gb|BI136301.1|BI136301 F066P33Y Populus flower cDNA library... 73 5e-026
gb|AJ776745.1|AJ776745 AJ776745 Populus euphratica root 3-6... 117 1e-025
gb|BI136881.1|BI136881 F075P93Y Populus flower cDNA library... 71 2e-025
gb|CV262641.1|CV262641 WS0202.B21_B22 PTxN-IB-N-A-11 Populu... 71 4e-025
gb|DT511195.1|DT511195 WS02429.BR_M24 PTxD-ICC-N-A-14 Popul... 115 6e-025
gb|BU875452.1|BU875452 V007C11 Populus flower cDNA library ... 115 8e-025
gb|BU876142.1|BU876142 V016F11 Populus flower cDNA library ... 115 8e-025
gb|BU883349.1|BU883349 UM89TD10 Populus flower cDNA library... 115 8e-025
gb|AF185574.2| Populus tremuloides transcription factor MAG... 115 8e-025
gb|CK109990.1|CK109990 N051E04 Populus bark cDNA library Po... 114 1e-024
gb|DN500995.1|DN500995 UM45TD08.5pR Populus female catkins ... 114 1e-024
gb|BU869391.1|BU869391 M129E09 Populus flower cDNA library ... 113 3e-024
gb|BI136255.1|BI136255 F065P62Y Populus flower cDNA library... 82 4e-024
gb|BU869954.1|BU869954 Q006E04 Populus flower cDNA library ... 111 8e-024
gb|AY235222.1| Populus tremuloides SEP3-related MADS-box pr... 111 8e-024
gb|BU876286.1|BU876286 V018G10 Populus flower cDNA library ... 110 2e-023
gb|BU892010.1|BU892010 P058B10 Populus petioles cDNA librar... 109 4e-023
gb|CX178021.1|CX178021 B01_45-88_03.ab1 leaf inoculated wit... 108 7e-023
gb|CV242364.1|CV242364 WS02514.B21.1_N19 PT-MB-N-A-15 Popul... 108 1e-022
gb|DN494603.1|DN494603 M112C09.5pR Populus female catkins c... 108 1e-022
gb|DT499735.1|DT499735 WS9991.BR_D06 PT-P-FL-A-2 Populus tr... 108 1e-022
gb|DT520386.1|DT520386 WS02447.B21_G16 PTxD-ICC-N-A-14 Popu... 67 2e-022
gb|BU897836.1|BU897836 X070E03 Populus wood cDNA library Po... 107 2e-022
gb|DT493519.1|DT493519 WS0111.BR_J17 PT-P-FL-A-2 Populus tr... 106 3e-022
gb|BU895896.1|BU895896 X032F06 Populus wood cDNA library Po... 105 5e-022
gb|AJ780611.1|AJ780611 AJ780611 Populus euphratica leaf 3-6... 105 6e-022
gb|DN484153.1|DN484153 PTRI27.5pR Populus cDNA, trichocarpa... 83 9e-022
gb|DT524867.1|DT524867 WS02043.C21_M22 PTxN-IB-N-A-11 Popul... 100 1e-021
gb|AY501392.1| Populus tomentosa MADS box transcription fac... 104 1e-021
gb|CV244620.1|CV244620 WS0255.B21_C14 PT-MB-N-A-15 Populus ... 103 3e-021
gb|CX168497.1|CX168497 E12_69-75_10.ab1 leaf inoculated wit... 103 3e-021
gb|CX172311.1|CX172311 A03_69-28_01.ab1 leaf inoculated wit... 103 3e-021
gb|DT519845.1|DT519845 WS02443.B21_N10 PTxD-ICC-N-A-14 Popu... 103 3e-021
gb|BU871887.1|BU871887 Q035F11 Populus flower cDNA library ... 102 4e-021
gb|CK106139.1|CK106139 UB10CPE08.5pR Populus active cambium... 102 4e-021
gb|DV463676.1|DV463676 MTUNUL1.P19.A07 NUL Populus fremonti... 102 4e-021
gb|BU821074.1|BU821074 UB18CPG04 Populus tremula cambium cD... 101 8e-021
gb|CK106370.1|CK106370 UB18CPG04.5pR Populus active cambium... 101 8e-021
gb|CV247277.1|CV247277 WS01117.B21_K02 PT-P-FL-A-2 Populus ... 101 8e-021
gb|DT494170.1|DT494170 WS01117.BR_K02 PT-P-FL-A-2 Populus t... 101 8e-021
gb|DT510135.1|DT510135 WS02425.BR_L05 PTxD-ICC-N-A-14 Popul... 101 8e-021
gb|DT521357.1|DT521357 WS02034.B21_B05 PTxN-IB-N-A-11 Popul... 101 8e-021
>gb|DN501305.1|DN501305 UM83TF04.5pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM83TF04 5', mRNA sequence
Length = 860
Score = 144 bits (308), Expect(2) = 2e-068
Identities = 59/117 (50%), Positives = 91/117 (77%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS A +I E+ Q+Y+QESA+LRQQI LQNSNR L+GD+++ +S KELK LE
Sbjct: 299 KKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLSVKELKQLEN 478
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMGA 806
RL++ + +IR+KK+++L +E+EY+Q+RE+EL+N+++ LR+++ E ER QQ + GA
Sbjct: 479 RLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTKIAEVERLQQANMVTGA 649
Score = 137 bits (293), Expect(2) = 2e-068
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN+
Sbjct: 92 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNN 271
Score = 84.5 bits (178), Expect(4) = 7e-035
Identities = 40/84 (47%), Positives = 51/84 (60%)
Frame = -1 / -3
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
AP+ C +LS S+ +L+ LSF +SISL C YS S S S FF LI LS+L S
Sbjct: 648 APVTMLAC*SLSTSAILVLRQTLSFSSSISLFCKYSISASSNSCFFDLILVMPLSSLFSS 469
Query: 625 CLSSLWLMVVIESPIRALLEFCKL 554
CLSS ++ SPI+ LLEFC +
Sbjct: 468 CLSSFTDKLLTASPIKCLLEFCSI 397
Score = 56.5 bits (117), Expect(4) = 7e-035
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = -1 / -3
Query: 427 LLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVTCLLVVFSMRLISV 260
LLLAYS*RRPRLEK AF + P LQKVT LVVFS+ LIS+
Sbjct: 270 LLLAYS*RRPRLEKTMRATSASHRTDNS*AFFKSPFLLLQKVT*RLVVFSILLISI 103
Score = 33.6 bits (67), Expect(4) = 7e-035
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1 / -3
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLL 419
+++ A ELS +AFLYLSMV LLL
Sbjct: 342 SVIEDAFELSELAFLYLSMVDLMLLL 265
Score = 29.5 bits (58), Expect(4) = 7e-035
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3 / -2
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNR 489
PV +L +LLPQ FLL++L D C+R
Sbjct: 418 PVRIL*HLNLLPQLC*FLLIILGIDFCDR 332
>gb|BU882889.1|BU882889 UM83TF04 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 588
Score = 137 bits (293), Expect(2) = 2e-061
Identities = 57/60 (95%), Positives = 59/60 (98%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN+
Sbjct: 108 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNN 287
Score = 120 bits (256), Expect(2) = 2e-061
Identities = 49/91 (53%), Positives = 72/91 (79%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS A +I E+ Q+Y+QESA+LRQQI LQNSNR L+GD+++ +S KELK LE
Sbjct: 315 KKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLSVKELKQLEN 494
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMEL 728
RL++ + +IR+KK++ L +E+EY+Q+RE+EL
Sbjct: 495 RLERGITRIRSKKHEXLLAEIEYLQKREIEL 587
Score = 64.3 bits (134), Expect(4) = 5e-029
Identities = 30/58 (51%), Positives = 36/58 (62%)
Frame = -1 / -3
Query: 727 NSISLLCMYSTSEHSTSFFFALIFPRALSNLVSKCLSSLWLMVVIESPIRALLEFCKL 554
+SISL C YS S S S FF LI LS+L S CLSS ++ SPI+ LLEFC +
Sbjct: 586 SSISLFCKYSISASSXSCFFDLILVMPLSSLFSSCLSSFTDKLLTASPIKCLLEFCSI 413
Score = 56.5 bits (117), Expect(4) = 5e-029
Identities = 30/56 (53%), Positives = 33/56 (58%)
Frame = -1 / -3
Query: 427 LLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKVTCLLVVFSMRLISV 260
LLLAYS*RRPRLEK AF + P LQKVT LVVFS+ LIS+
Sbjct: 286 LLLAYS*RRPRLEKTMRATSASHRTDNS*AFFKSPFLLLQKVT*RLVVFSILLISI 119
Score = 33.6 bits (67), Expect(4) = 5e-029
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1 / -3
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLL 419
+++ A ELS +AFLYLSMV LLL
Sbjct: 358 SVIEDAFELSELAFLYLSMVDLMLLL 281
Score = 29.5 bits (58), Expect(4) = 5e-029
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3 / -2
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNR 489
PV +L +LLPQ FLL++L D C+R
Sbjct: 434 PVRIL*HLNLLPQLC*FLLIILGIDFCDR 348
>gb|DN491294.1|DN491294 UM83TF04.3pR Populus female catkins cDNA library Populus
trichocarpa cDNA clone UM83TF04 3', mRNA sequence
Length = 813
Score = 144 bits (308), Expect(2) = 3e-057
Identities = 59/117 (50%), Positives = 91/117 (77%)
Frame = +3 / -2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS A +I E+ Q+Y+QESA+LRQQI LQNSNR L+GD+++ +S KELK LE
Sbjct: 548 KKASSDSSNASSITEINAQYYQQESAKLRQQIQMLQNSNRHLMGDAVSNLSVKELKQLEN 369
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMGA 806
RL++ + +IR+KK+++L +E+EY+Q+RE+EL+N+++ LR+++ E ER QQ + GA
Sbjct: 368 RLERGITRIRSKKHELLLAEIEYLQKREIELENESVCLRTKIAEVERLQQANMVTGA 198
Score = 99.6 bits (211), Expect(2) = 3e-057
Identities = 41/42 (97%), Positives = 42/42 (100%)
Frame = +3 / -2
Query: 303 TFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
TFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN+
Sbjct: 701 TFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNN 576
Score = 84.5 bits (178), Expect(4) = 3e-030
Identities = 40/84 (47%), Positives = 51/84 (60%)
Frame = -1 / +1
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
AP+ C +LS S+ +L+ LSF +SISL C YS S S S FF LI LS+L S
Sbjct: 199 APVTMLAC*SLSTSAILVLRQTLSFSSSISLFCKYSISASSNSCFFDLILVMPLSSLFSS 378
Query: 625 CLSSLWLMVVIESPIRALLEFCKL 554
CLSS ++ SPI+ LLEFC +
Sbjct: 379 CLSSFTDKLLTASPIKCLLEFCSI 450
Score = 40.5 bits (82), Expect(4) = 3e-030
Identities = 21/42 (50%), Positives = 22/42 (52%)
Frame = -1 / +1
Query: 427 LLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLRRLQKV 302
LLLAYS*RRPRLEK AF + P LQKV
Sbjct: 577 LLLAYS*RRPRLEKTMRATSASHRTDNS*AFFKSPFLLLQKV 702
Score = 33.6 bits (67), Expect(4) = 3e-030
Identities = 15/26 (57%), Positives = 19/26 (73%)
Frame = -1 / +1
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLL 419
+++ A ELS +AFLYLSMV LLL
Sbjct: 505 SVIEDAFELSELAFLYLSMVDLMLLL 582
Score = 29.5 bits (58), Expect(4) = 3e-030
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = -3 / +3
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNR 489
PV +L +LLPQ FLL++L D C+R
Sbjct: 429 PVRIL*HLNLLPQLC*FLLIILGIDFCDR 515
>gb|BU882965.1|BU882965 UM84TE12 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 562
Score = 165 bits (355), Expect(2) = 4e-052
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 199 GRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 378
Query: 429 VKGTIERYKKATSDNSS 479
VK TIERYKKA +D+S+
Sbjct: 379 VKSTIERYKKACADSSN 429
Score = 60.6 bits (126), Expect(2) = 4e-052
Identities = 25/53 (47%), Positives = 38/53 (71%)
Frame = +3 / +1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHK 614
K +SS G+++E Q Y+QE+A+LR QI NLQNSNR ++G+S++ +S K
Sbjct: 403 KKACADSSNNGSVSEANAQFYQQEAAKLRSQIGNLQNSNRNMLGESLSALSVK 561
>gb|BU883614.1|BU883614 UM95TA01 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 613
Score = 161 bits (347), Expect(2) = 3e-049
Identities = 67/77 (87%), Positives = 75/77 (97%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEVALIVFSSRGRLYEY+N+S
Sbjct: 276 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNDS 455
Query: 429 VKGTIERYKKATSDNSS 479
VK TIERYKKA++D+S+
Sbjct: 456 VKSTIERYKKASADSSN 506
Score = 54.7 bits (113), Expect(2) = 3e-049
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIG 587
K S +SS G+++E Q+Y+QE+A+LR QI NLQ SNR ++G
Sbjct: 480 KKASADSSNTGSVSEANAQYYQQEAAKLRSQIGNLQKSNRHMLG 611
>gb|DT509633.1|DT509633 WS02424.BR_E10 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02424_E10 5', mRNA sequence
Length = 905
Score = 162 bits (349), Expect(2) = 9e-041
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEYANN+
Sbjct: 68 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANNN 247
Query: 429 VKGTIERYKKATSDNSSAA 485
++ TI+RYKK +SD+S+ A
Sbjct: 248 IRSTIDRYKKVSSDSSNTA 304
Score = 141 bits (303), Expect = 8e-033
Identities = 57/116 (49%), Positives = 89/116 (76%)
Frame = +3 / +2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS +I E+ Q+Y+QESA++RQQI LQNSNR L+G++++ +S KELK LE
Sbjct: 272 KKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLSVKELKQLEN 451
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMG 803
RL++ + +IR+KK+++L +E+EYMQ+RE+EL+N++ YLR+++ E ER QQ + G
Sbjct: 452 RLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKIAEVERLQQANMVTG 619
Score = 77.1 bits (162), Expect(3) = 3e-032
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = -1 / -3
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
+P+ C +LS S+ + + LSF +SISL C+YS S S S FF LI LS+L S
Sbjct: 621 SPVTMLAC*SLSTSAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSS 442
Query: 625 CLSSLWLMVVIESPIRALLEFC 560
C SS ++ SPI+ LLEFC
Sbjct: 441 CFSSFTDRLLTASPIKCLLEFC 376
Score = 75.8 bits (159), Expect(3) = 3e-032
Identities = 39/79 (49%), Positives = 46/79 (58%)
Frame = -1 / -3
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLR 317
+++ A ELS + FLYLS+V LLLAYS*RRPRLEK AF P
Sbjct: 315 SVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEKTMRETSASQRTDNS*AFFNSPFL 136
Query: 316 RLQKVTCLLVVFSMRLISV 260
LQKVT VVFS+ LIS+
Sbjct: 135 LLQKVT*RFVVFSILLISI 79
Score = 29.0 bits (57), Expect(2) = 9e-041
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1 / +3
Query: 667 QKRTMCCVLKSSTCREGKWSCRM 735
Q+ CC LK S CR+G+ S +M
Sbjct: 483 QRSMNCC*LKLSICRKGRLSWKM 551
Score = 24.9 bits (48), Expect(3) = 3e-032
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -2
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNRTS 483
PV +L +LL FLL++L D C+R S
Sbjct: 391 PVRIL*QLNLLTHLC*FLLIILGIDFCDRGS 299
>gb|DT510612.1|DT510612 WS02427.BR_A17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_A17 5', mRNA sequence
Length = 920
Score = 162 bits (349), Expect(2) = 9e-041
Identities = 66/79 (83%), Positives = 75/79 (94%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEYANN+
Sbjct: 72 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANNN 251
Query: 429 VKGTIERYKKATSDNSSAA 485
++ TI+RYKK +SD+S+ A
Sbjct: 252 IRSTIDRYKKVSSDSSNTA 308
Score = 141 bits (303), Expect = 8e-033
Identities = 57/116 (49%), Positives = 89/116 (76%)
Frame = +3 / +3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS +I E+ Q+Y+QESA++RQQI LQNSNR L+G++++ +S KELK LE
Sbjct: 276 KKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLSVKELKQLEN 455
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMG 803
RL++ + +IR+KK+++L +E+EYMQ+RE+EL+N++ YLR+++ E ER QQ + G
Sbjct: 456 RLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKIAEVERLQQANMVTG 623
Score = 77.1 bits (162), Expect(3) = 3e-032
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = -1 / -2
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
+P+ C +LS S+ + + LSF +SISL C+YS S S S FF LI LS+L S
Sbjct: 625 SPVTMLAC*SLSTSAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSS 446
Query: 625 CLSSLWLMVVIESPIRALLEFC 560
C SS ++ SPI+ LLEFC
Sbjct: 445 CFSSFTDRLLTASPIKCLLEFC 380
Score = 75.8 bits (159), Expect(3) = 3e-032
Identities = 39/79 (49%), Positives = 46/79 (58%)
Frame = -1 / -2
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRPLR 317
+++ A ELS + FLYLS+V LLLAYS*RRPRLEK AF P
Sbjct: 319 SVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEKTMRETSASQRTDNS*AFFNSPFL 140
Query: 316 RLQKVTCLLVVFSMRLISV 260
LQKVT VVFS+ LIS+
Sbjct: 139 LLQKVT*RFVVFSILLISI 83
Score = 29.0 bits (57), Expect(2) = 9e-041
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1 / +1
Query: 667 QKRTMCCVLKSSTCREGKWSCRM 735
Q+ CC LK S CR+G+ S +M
Sbjct: 487 QRSMNCC*LKLSICRKGRLSWKM 555
Score = 24.9 bits (48), Expect(3) = 3e-032
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / -1
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNRTS 483
PV +L +LL FLL++L D C+R S
Sbjct: 395 PVRIL*QLNLLTHLC*FLLIILGIDFCDRGS 303
>gb|BU896825.1|BU896825 X046D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 596
Score = 131 bits (281), Expect(2) = 2e-040
Identities = 53/73 (72%), Positives = 66/73 (90%)
Frame = +3 / +3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS+RG+LYE++++S+
Sbjct: 90 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSI 269
Query: 432 KGTIERYKKATSD 470
TIERY+K D
Sbjct: 270 NRTIERYQKRAKD 308
Score = 55.1 bits (114), Expect(2) = 2e-040
Identities = 26/82 (31%), Positives = 48/82 (58%)
Frame = +3 / +3
Query: 507 IQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVL 686
IQ K+++ L ++I L+ S R + + + T S +L+ LE +L+++L +IRA+KN +
Sbjct: 342 IQPVKEDTFTLAKKIELLEVSKRKFLREGLETCSTDDLQQLENQLERSLTRIRARKNQLF 521
Query: 687 CSEVEYMQRREMELQNDNLYLR 752
+E ++ E L +N LR
Sbjct: 522 RERIEKLKGEEKILLEENTRLR 587
>gb|BU896348.1|BU896348 X039D07 Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 739
Score = 130 bits (278), Expect(2) = 3e-040
Identities = 52/73 (71%), Positives = 66/73 (90%)
Frame = +3 / +3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALI+FS+RG+LYE++++S+
Sbjct: 210 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALILFSTRGKLYEFSSSSI 389
Query: 432 KGTIERYKKATSD 470
TIERY+K D
Sbjct: 390 NRTIERYQKRAKD 428
Score = 56.1 bits (116), Expect(2) = 3e-040
Identities = 24/79 (30%), Positives = 48/79 (60%)
Frame = +3 / +3
Query: 483 AGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKI 662
+G + + IQ K+++ L ++I L+ S R +G+ + T S +L+ LE +L+++L +I
Sbjct: 438 SGKMVQDNIQPVKEDAFTLAKKIELLEVSKRKFLGEGLETCSTDDLQQLENQLERSLTRI 617
Query: 663 RAKKNDVLCSEVEYMQRRE 719
RA+KN + +E ++ E
Sbjct: 618 RARKNQLFRERIEKLKGEE 674
>gb|CA924237.1|CA924237 MTU7CL.P3.D05 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 623
Score = 125 bits (268), Expect(2) = 6e-040
Identities = 50/76 (65%), Positives = 67/76 (88%)
Frame = +3 / -3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVA+IVFS RG+LYE+ ++SV
Sbjct: 510 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVAVIVFSPRGKLYEFGSSSV 331
Query: 432 KGTIERYKKATSDNSS 479
+ TIERY++ + ++
Sbjct: 330 QETIERYQRHVKEGNT 283
Score = 59.7 bits (124), Expect(2) = 6e-040
Identities = 25/88 (28%), Positives = 56/88 (63%)
Frame = +3 / -3
Query: 495 AEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKK 674
+E ++ K E+A + ++I L+ S R L+G+ + + + +EL+ +E +L++++ IRA+K
Sbjct: 270 SEQNVEQLKGEAASMIKKIEILEVSKRKLLGECLGSCTIEELQQIEQQLERSVSTIRARK 91
Query: 675 NDVLCSEVEYMQRREMELQNDNLYLRSR 758
N V ++E ++++E L +N L ++
Sbjct: 90 NQVFRDQIEQLKQKEKLLTAENARLSNK 7
>gb|AI161962.1|AI161962 A010P29U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 548
Score = 130 bits (279), Expect(2) = 1e-039
Identities = 53/73 (72%), Positives = 66/73 (90%)
Frame = +3 / +3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS+RG+LYE++++S+
Sbjct: 48 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSM 227
Query: 432 KGTIERYKKATSD 470
TIERY+K D
Sbjct: 228 NRTIERYQKRAKD 266
Score = 53.8 bits (111), Expect(2) = 1e-039
Identities = 27/83 (32%), Positives = 46/83 (55%)
Frame = +3 / +3
Query: 504 TIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDV 683
++Q K+++ L ++I L+ S R L+GD + EL+ LE L++ +IRA+KN +
Sbjct: 297 SMQPVKEDAFTLAKKIDILEVSKRKLLGDGLEPCXIDELQQLENPLERX*PRIRARKNQL 476
Query: 684 LCSEVEYMQRREMELQNDNLYLR 752
+VE ++ E L N LR
Sbjct: 477 FSEQVEKLEGEEEILMGGNXELR 545
>gb|AF052570.1|AF052570 Populus balsamifera subsp. trichocarpa AGAMOUS homolog (PTAG1) gene,
complete cds
Length = 11485
Score = 131 bits (280), Expect(5) = 2e-039
Identities = 54/59 (91%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEVALIVFSSRGRLYEY+N+
Sbjct: 3118 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSND 3294
Score = 41.4 bits (84), Expect(5) = 2e-039
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3 / +3
Query: 510 QHYKQESARLRQQIVNLQNSNRA 578
Q+Y+QE+A+LR QI NLQNSNR+
Sbjct: 8892 QYYQQEAAKLRSQIGNLQNSNRS 8960
Score = 33.6 bits (67), Expect(5) = 2e-039
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +3 / +3
Query: 426 SVKGTIERYKKATSDNSS 479
SVK TIERYKKA++D+S+
Sbjct: 8160 SVKSTIERYKKASADSSN 8213
Score = 27.6 bits (54), Expect(5) = 2e-039
Identities = 10/19 (52%), Positives = 16/19 (84%)
Frame = +3 / +3
Query: 672 KNDVLCSEVEYMQRREMEL 728
+N++L +E+EYMQ+R M L
Sbjct: 9282 QNELLFAEIEYMQKRVMLL 9338
Score = 25.8 bits (50), Expect(5) = 2e-039
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3 / +1
Query: 729 QNDNLYLRSRVDENERAQQTANMMGAPSTSEYQQ 830
+N L L ++ ENER +Q+ N+M + E Q
Sbjct: 9682 RNMRLILIVQISENERKRQSMNLMPGGADFEIVQ 9783
>gb|AF052571.1|AF052571 Populus balsamifera subsp. trichocarpa AGAMOUS homolog (PTAG2) gene,
complete cds
Length = 10007
Score = 135 bits (290), Expect(4) = 5e-039
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN
Sbjct: 2975 GRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 3151
Score = 39.6 bits (80), Expect(4) = 5e-039
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +3 / +3
Query: 510 QHYKQESARLRQQIVNLQNSNR 575
Q Y+QE+A+LR QI NLQNSNR
Sbjct: 7944 QFYQQEAAKLRSQIGNLQNSNR 8009
Score = 32.7 bits (65), Expect(4) = 5e-039
Identities = 13/18 (72%), Positives = 16/18 (88%)
Frame = +3 / +2
Query: 426 SVKGTIERYKKATSDNSS 479
SVK TIERYKKA +D+S+
Sbjct: 7034 SVKSTIERYKKACADSSN 7087
Score = 28.1 bits (55), Expect(4) = 5e-039
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +1 / +2
Query: 661 LEQKRTMCCVLKSSTCREG 717
L+ R CC+LK S CR G
Sbjct: 8318 LKPARMSCCLLKLSICRRG 8374
>gb|CV245843.1|CV245843 WS0259.B21_I15 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS0259_I15 3', mRNA sequence
Length = 836
Score = 120 bits (256), Expect(2) = 1e-038
Identities = 49/79 (62%), Positives = 66/79 (83%)
Frame = +3 / -1
Query: 264 EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTI 443
++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS+RG+LYE++++S+ TI
Sbjct: 836 QMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSMNRTI 657
Query: 444 ERYKKATSDNSSAAGTIAE 500
E Y+K D +++ + +
Sbjct: 656 ESYQKRAKDVGTSSKMVKD 600
Score = 60.6 bits (126), Expect(2) = 1e-038
Identities = 27/84 (32%), Positives = 51/84 (60%)
Frame = +3 / -1
Query: 507 IQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVL 686
+Q K+++ L ++I L+ S R L+GD + S +L+ LE +L+++L +IRA+KN +
Sbjct: 596 MQPVKEDAFTLAKKIELLEVSKRKLLGDGLEPCSIDDLQQLENQLERSLTRIRARKNQLF 417
Query: 687 CSEVEYMQRREMELQNDNLYLRSR 758
++E ++ E L +N LR +
Sbjct: 416 REQIEKLKGEEKILMEENTELREK 345
>gb|BU878009.1|BU878009 V042A05 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 278
Score = 160 bits (343), Expect = 3e-038
Identities = 67/71 (94%), Positives = 69/71 (97%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NNS
Sbjct: 58 GRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS 237
Query: 429 VKGTIERYKKA 461
VK TIERYKKA
Sbjct: 238 VKSTIERYKKA 270
>gb|DT489131.1|DT489131 WS02538.B21_G02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02538_G02 3', mRNA sequence
Length = 853
Score = 106 bits (227), Expect(2) = 2e-037
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +3 / -2
Query: 255 GKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVK 434
GK ++RIEN +RQVTF KRRNGLLKKAYELS+LCDAEVALI+FSS G+L+E+++ +
Sbjct: 852 GKVVLERIENKISRQVTFSKRRNGLLKKAYELSLLCDAEVALIIFSSHGKLFEFSSIDMN 673
Query: 435 GTIERYKK 458
++RY++
Sbjct: 672 SILQRYRQ 649
Score = 69.8 bits (146), Expect(2) = 2e-037
Identities = 27/82 (32%), Positives = 53/82 (64%)
Frame = +3 / -2
Query: 522 QESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVE 701
QE +RLR + LQ S R +G+ + ++ KEL+ +E +LDK L + R +K ++ ++E
Sbjct: 591 QEVSRLRAKCETLQRSQRNFLGEDLEPLAFKELEKIEKQLDKTLSQARQRKTQLMFDKME 412
Query: 702 YMQRREMELQNDNLYLRSRVDE 767
++ +E EL+ +N L+++++E
Sbjct: 411 ELRLKEQELEEENKQLKTKLEE 346
>gb|DV466358.1|DV466358 MTUNUL1.P5.F01 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 723
Score = 108 bits (230), Expect(2) = 3e-037
Identities = 43/60 (71%), Positives = 55/60 (91%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYA +S
Sbjct: 161 GRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 340
Score = 68.4 bits (143), Expect(2) = 3e-037
Identities = 27/85 (31%), Positives = 54/85 (63%)
Frame = +3 / +2
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E A+L+ ++ LQ + R +G+ + +++ KEL++LE ++D AL +R++KN ++ +
Sbjct: 440 EYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYESISE 619
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
+Q+++ LQ N L +V E E+A
Sbjct: 620 LQKKDKALQEQNNMLAKKVKEKEKA 694
>gb|AF034093.2| Populus tremuloides PTM1 mRNA, complete cds
Length = 994
Score = 104 bits (221), Expect(2) = 2e-036
Identities = 41/59 (69%), Positives = 52/59 (88%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+G+ ++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVALIVFS +G+L+EY+ +
Sbjct: 23 GRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTD 199
Score = 69.3 bits (145), Expect(2) = 2e-036
Identities = 30/84 (35%), Positives = 53/84 (63%)
Frame = +3 / +2
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E RL+ ++ LQ ++R +G+ + +MS KEL++LE +++ AL IRA+KN ++ +
Sbjct: 299 EYNRLKAKVELLQRNHRNYVGEDLDSMSLKELQNLEQQIETALKHIRARKNHLMSQSISE 478
Query: 705 MQRREMELQNDNLYLRSRVDENER 776
MQR+E +Q N L ++ E E+
Sbjct: 479 MQRKEKAIQVQNNMLVKQIKEKEK 550
>gb|BU872670.1|BU872670 Q045E11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 734
Score = 106 bits (226), Expect(2) = 2e-036
Identities = 42/60 (70%), Positives = 55/60 (91%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN NRQVTF +RR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYA +S
Sbjct: 150 GRGRIQLKRIENKINRQVTFSERRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 329
Score = 67.0 bits (140), Expect(2) = 2e-036
Identities = 27/85 (31%), Positives = 53/85 (62%)
Frame = +3 / +3
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E A+L+ ++ LQ + R +G+ + + + KEL++LE ++D AL +R++KN ++ +
Sbjct: 429 EYAKLKARVDVLQRNQRHFMGEDLDSSNIKELQNLEHQIDSALKHVRSRKNQLMYESISE 608
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
+Q+++ LQ N L +V E E+A
Sbjct: 609 LQKKDKALQEQNNMLAKKVKEKEKA 683
>gb|AY615966.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-2 mRNA, complete cds
Length = 1146
Score = 102 bits (217), Expect(2) = 8e-036
Identities = 41/59 (69%), Positives = 51/59 (86%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+G+ ++KRIEN NRQVTF KRR GLLKKA E+SVLCDAEVALIVFS +G+L+EY+ +
Sbjct: 167 GRGRVQLKRIENKINRQVTFSKRRTGLLKKANEISVLCDAEVALIVFSHKGKLFEYSTD 343
Score = 69.3 bits (145), Expect(2) = 8e-036
Identities = 30/84 (35%), Positives = 53/84 (63%)
Frame = +3 / +2
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E RL+ ++ LQ ++R +G+ + +MS KEL++LE ++D AL IRA+KN ++ +
Sbjct: 443 EYNRLKAKVELLQRNHRNYLGEDLDSMSLKELQNLEQQIDTALKHIRARKNHLMSQSISE 622
Query: 705 MQRREMELQNDNLYLRSRVDENER 776
+QR+E +Q N L ++ E E+
Sbjct: 623 LQRKEKAIQVQNNMLVKQIKEKEK 694
>gb|DN484014.1|DN484014 PSO205E04 Populus tomentiglandulosa T. Lee cDNA library Populus
tomentiglandulosa cDNA, mRNA sequence
Length = 810
Score = 115 bits (246), Expect(2) = 8e-036
Identities = 44/69 (63%), Positives = 59/69 (85%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+GK E+KRIEN T RQVTF KRRNGLLKKA+ELS+LCDAEV+LI+FS G+ Y++A++
Sbjct: 52 GRGKVELKRIENPTRRQVTFSKRRNGLLKKAFELSILCDAEVSLIIFSPTGKFYQFASHE 231
Query: 429 VKGTIERYK 455
++ T+ RY+
Sbjct: 232 MERTVARYR 258
Score = 56.1 bits (116), Expect(2) = 8e-036
Identities = 24/88 (27%), Positives = 49/88 (55%)
Frame = +3 / +1
Query: 504 TIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDV 683
+++ ++ E L++ I ++ R IG+ I + KELK LE +L + ++RAKK +
Sbjct: 301 SLEFWRCEIEELQKTINEMEAQLRHCIGEDIEMLGMKELKQLERQLKTGVERVRAKKLRI 480
Query: 684 LCSEVEYMQRREMELQNDNLYLRSRVDE 767
V +++ ++ +Q +N L+ R+ E
Sbjct: 481 AADHVNWLKGKQRSIQEENARLKKRLHE 564
>gb|DV466538.1|DV466538 MTUNUL1.P6.H12 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 684
Score = 108 bits (230), Expect(2) = 8e-036
Identities = 43/60 (71%), Positives = 55/60 (91%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYA +S
Sbjct: 158 GRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 337
Score = 63.4 bits (132), Expect(2) = 8e-036
Identities = 25/81 (30%), Positives = 51/81 (62%)
Frame = +3 / +2
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E A+L+ ++ LQ + R +G+ + +++ KEL++LE ++D AL +R++KN ++ +
Sbjct: 437 EYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYESISE 616
Query: 705 MQRREMELQNDNLYLRSRVDE 767
+Q+++ LQ N L +V E
Sbjct: 617 LQKKDKALQEQNNMLAKKVKE 679
>gb|AY615964.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-1 mRNA, complete cds
Length = 942
Score = 106 bits (227), Expect(2) = 5e-035
Identities = 42/60 (70%), Positives = 53/60 (88%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVALIVFS +G+L+EY+ N+
Sbjct: 28 GRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTNA 207
Score = 62.0 bits (129), Expect(2) = 5e-035
Identities = 27/85 (31%), Positives = 52/85 (61%)
Frame = +3 / +1
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E RL+ ++ LQ ++R +G+ + ++S KEL++LE ++D AL IR +KN ++ +
Sbjct: 304 EYNRLKAKVELLQRNHRHYLGEDLDSVSLKELQNLEQQIDTALKLIRERKNHLMYQSISE 483
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
+Q +E ++ N L ++ E E+A
Sbjct: 484 LQIKEKAIKEQNNMLVKQIKEKEKA 558
>gb|BU868189.1|BU868189 M112C09 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 615
Score = 108 bits (230), Expect(2) = 1e-034
Identities = 43/60 (71%), Positives = 55/60 (91%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYA +S
Sbjct: 117 GRGRIQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYATDS 296
Score = 59.3 bits (123), Expect(2) = 1e-034
Identities = 22/72 (30%), Positives = 47/72 (65%)
Frame = +3 / +3
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E A+L+ ++ LQ + R +G+ + +++ KEL++LE ++D AL +R++KN ++ +
Sbjct: 396 EYAKLKARVDVLQRNQRHFMGEDLDSLNIKELQNLEHQIDSALKHVRSRKNQLMYESISE 575
Query: 705 MQRREMELQNDN 740
+Q+++ LQ N
Sbjct: 576 LQKKDKALQEQN 611
>gb|AY515153.1| Populus deltoides APETALA-like protein AP1 mRNA, complete cds
Length = 1109
Score = 102 bits (217), Expect(2) = 2e-034
Identities = 39/60 (65%), Positives = 54/60 (90%)
Frame = +3 / +3
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN +RQVTF KRR GLLKKA+E+SVLCDA+VA+IVFS++G+L+EY+ +S
Sbjct: 81 GRGRVQLKRIENNISRQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDS 260
Score = 64.8 bits (135), Expect(2) = 2e-034
Identities = 29/85 (34%), Positives = 50/85 (58%)
Frame = +3 / +3
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E +LR ++ LQ + R G + +S+KEL HLE ++D AL +R++KN ++ +
Sbjct: 357 EHPKLRARVELLQRNLRNYTGQDLDPLSYKELHHLEQKIDTALKSVRSRKNQLVHESLAE 536
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
MQ++E LQ+ N L +V + +A
Sbjct: 537 MQKKEKALQDQNNILVEQVKKKLKA 611
>gb|AF034094.2| Populus tremuloides PTM2 mRNA, complete cds
Length = 969
Score = 103 bits (220), Expect(2) = 2e-034
Identities = 41/60 (68%), Positives = 52/60 (86%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVALIVF +G+L+EY+ N+
Sbjct: 22 GRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFCHKGKLFEYSTNA 201
Score = 63.4 bits (132), Expect(2) = 2e-034
Identities = 27/85 (31%), Positives = 53/85 (62%)
Frame = +3 / +1
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E RL++++ LQ ++R +G+ + ++S KEL++LE ++D AL IR +KN ++ +
Sbjct: 298 EYNRLKEKVELLQRNHRHYLGEDLDSVSLKELQNLEKQIDTALELIRERKNHLMYQSISE 477
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
+Q +E ++ N L ++ E E+A
Sbjct: 478 LQIKEKAIKEQNNMLVKQIKEKEKA 552
>gb|CK096310.1|CK096310 UB10CPE08.3pR Populus active cambium cDNA library Populus tremula
cDNA clone UB10CPE08 3', mRNA sequence
Length = 829
Score = 102 bits (218), Expect(2) = 4e-033
Identities = 39/57 (68%), Positives = 52/57 (91%)
Frame = +3 / -1
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYAN 422
+GK ++KRIEN T+RQVTF KR+NGLLKKAYELS+LCDAEVA+I+FS +G L+++A+
Sbjct: 703 RGKVQLKRIENATSRQVTFSKRKNGLLKKAYELSILCDAEVAVIIFSQKGTLFKFAS 533
Score = 59.7 bits (124), Expect(2) = 4e-033
Identities = 29/124 (23%), Positives = 63/124 (50%)
Frame = +3 / -1
Query: 417 ANNSVKGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSI 596
+ + ++ TI+RY+K + + + + + +QES + ++I ++ R L+G +
Sbjct: 535 STDQIQKTIDRYRKNAKQLHTDRIDVEQYSKEQLRQESENMAKKIEIIEILQRKLLGQDL 356
Query: 597 TTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENER 776
+ S +EL + +L+ +L IRA+K + ++E ++ +E L +N L + D
Sbjct: 355 DSCSPEELHDIGNQLEISLSNIRARKTQLFKEQIEQLKAKERLLLMENARLTKQRDAQPL 176
Query: 777 AQQT 788
Q T
Sbjct: 175 QQST 164
>gb|CV256507.1|CV256507 WS0244.B21_A19 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0244_A19 3', mRNA sequence
Length = 877
Score = 141 bits (303), Expect = 8e-033
Identities = 57/116 (49%), Positives = 89/116 (76%)
Frame = +3 / -2
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS +I E+ Q+Y+QESA++RQQI LQNSNR L+G++++ +S KELK LE
Sbjct: 780 KKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLSVKELKQLEN 601
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMG 803
RL++ + +IR+KK+++L +E+EYMQ+RE+EL+N++ YLR+++ E ER QQ + G
Sbjct: 600 RLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKIAEVERLQQANMVTG 433
Score = 77.1 bits (162), Expect(3) = 4e-026
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = -1 / +2
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
+P+ C +LS S+ + + LSF +SISL C+YS S S S FF LI LS+L S
Sbjct: 431 SPVTMLAC*SLSTSAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSS 610
Query: 625 CLSSLWLMVVIESPIRALLEFC 560
C SS ++ SPI+ LLEFC
Sbjct: 611 CFSSFTDRLLTASPIKCLLEFC 676
Score = 54.7 bits (113), Expect(3) = 4e-026
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -1 / +2
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLLAYS*RRPRLEK 386
+++ A ELS + FLYLS+V LLLAYS*RRPRLEK
Sbjct: 737 SVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEK 847
Score = 24.9 bits (48), Expect(3) = 4e-026
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNRTS 483
PV +L +LL FLL++L D C+R S
Sbjct: 661 PVRIL*QLNLLTHLC*FLLIILGIDFCDRGS 753
>gb|DT515243.1|DT515243 WS02427.B21_A17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02427_A17 3', mRNA sequence
Length = 835
Score = 141 bits (303), Expect = 8e-033
Identities = 57/116 (49%), Positives = 89/116 (76%)
Frame = +3 / -3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS +I E+ Q+Y+QESA++RQQI LQNSNR L+G++++ +S KELK LE
Sbjct: 776 KKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLSVKELKQLEN 597
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMG 803
RL++ + +IR+KK+++L +E+EYMQ+RE+EL+N++ YLR+++ E ER QQ + G
Sbjct: 596 RLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKIAEVERLQQANMVTG 429
Score = 77.1 bits (162), Expect(3) = 3e-024
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = -1 / +1
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
+P+ C +LS S+ + + LSF +SISL C+YS S S S FF LI LS+L S
Sbjct: 427 SPVTMLAC*SLSTSAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSS 606
Query: 625 CLSSLWLMVVIESPIRALLEFC 560
C SS ++ SPI+ LLEFC
Sbjct: 607 CFSSFTDRLLTASPIKCLLEFC 672
Score = 48.3 bits (99), Expect(3) = 3e-024
Identities = 21/34 (61%), Positives = 26/34 (76%)
Frame = -1 / +1
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLLAYS*RRPR 395
+++ A ELS + FLYLS+V LLLAYS*RRPR
Sbjct: 733 SVIEAVFELSELTFLYLSIVDLILLLAYS*RRPR 834
Score = 24.9 bits (48), Expect(3) = 3e-024
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / +3
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNRTS 483
PV +L +LL FLL++L D C+R S
Sbjct: 657 PVRIL*QLNLLTHLC*FLLIILGIDFCDRGS 749
>gb|DT520688.1|DT520688 WS02448.B21_E04 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02448_E04 3', mRNA sequence
Length = 897
Score = 141 bits (303), Expect = 8e-033
Identities = 57/116 (49%), Positives = 89/116 (76%)
Frame = +3 / -3
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS +I E+ Q+Y+QESA++RQQI LQNSNR L+G++++ +S KELK LE
Sbjct: 781 KKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLSVKELKQLEN 602
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMG 803
RL++ + +IR+KK+++L +E+EYMQ+RE+EL+N++ YLR+++ E ER QQ + G
Sbjct: 601 RLERGMTRIRSKKHELLLAEIEYMQKREIELENESAYLRTKIAEVERLQQANMVTG 434
Score = 95.5 bits (202), Expect(2) = 9e-021
Identities = 38/49 (77%), Positives = 46/49 (93%)
Frame = +3 / -3
Query: 339 AYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTIERYKKATSDNSSAA 485
AYELSVLCDAEV+LIVFSSRGRLYEYANN+++ TI+RYKK +SD+S+ A
Sbjct: 895 AYELSVLCDAEVSLIVFSSRGRLYEYANNNIRSTIDRYKKVSSDSSNTA 749
Score = 77.1 bits (162), Expect(3) = 4e-026
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = -1 / +3
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
+P+ C +LS S+ + + LSF +SISL C+YS S S S FF LI LS+L S
Sbjct: 432 SPVTMLAC*SLSTSAILVRR*ALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSS 611
Query: 625 CLSSLWLMVVIESPIRALLEFC 560
C SS ++ SPI+ LLEFC
Sbjct: 612 CFSSFTDRLLTASPIKCLLEFC 677
Score = 54.7 bits (113), Expect(3) = 4e-026
Identities = 24/37 (64%), Positives = 29/37 (78%)
Frame = -1 / +3
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLLAYS*RRPRLEK 386
+++ A ELS + FLYLS+V LLLAYS*RRPRLEK
Sbjct: 738 SVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEK 848
Score = 29.0 bits (57), Expect(2) = 9e-021
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1 / -1
Query: 667 QKRTMCCVLKSSTCREGKWSCRM 735
Q+ CC LK S CR+G+ S +M
Sbjct: 570 QRSMNCC*LKLSICRKGRLSWKM 502
Score = 24.9 bits (48), Expect(3) = 4e-026
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / +2
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNRTS 483
PV +L +LL FLL++L D C+R S
Sbjct: 662 PVRIL*QLNLLTHLC*FLLIILGIDFCDRGS 754
>gb|DT517651.1|DT517651 WS02434.B21_O16 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02434_O16 3', mRNA sequence
Length = 924
Score = 138 bits (297), Expect = 6e-032
Identities = 56/116 (48%), Positives = 89/116 (76%)
Frame = +3 / -1
Query: 456 KATSDNSSAAGTIAEVTIQHYKQESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLET 635
K S +SS +I E+ Q+Y+QESA++RQQI LQNSNR L+G++++ +S KELK LE
Sbjct: 783 KKVSSDSSNTASITEINAQYYQQESAKMRQQIQLLQNSNRHLMGEAVSNLSVKELKQLEN 604
Query: 636 RLDKALGKIRAKKNDVLCSEVEYMQRREMELQNDNLYLRSRVDENERAQQTANMMG 803
RL++ + +IR+KK+++L +E+EYMQ+RE+EL+N++ LR+++ E ER QQ + + G
Sbjct: 603 RLERGMTRIRSKKHELLLAEIEYMQKREIELENESACLRTKIAEVERLQQASMVTG 436
Score = 116 bits (247), Expect(2) = 7e-027
Identities = 47/58 (81%), Positives = 55/58 (94%)
Frame = +3 / -1
Query: 312 KRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKGTIERYKKATSDNSSAA 485
KRRNGLLKKAYELSVLCDAEV+LIVFSSRGRLYEYANN+++ TI+RYKK +SD+S+ A
Sbjct: 924 KRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYANNNIRSTIDRYKKVSSDSSNTA 751
Score = 78.5 bits (165), Expect(3) = 1e-026
Identities = 37/82 (45%), Positives = 49/82 (59%)
Frame = -1 / +2
Query: 805 APIMFAVCCALSFSSTRLLKYKLSFCNSISLLCMYSTSEHSTSFFFALIFPRALSNLVSK 626
+P+ C +LS S+ + + LSF +SISL C+YS S S S FF LI LS+L S
Sbjct: 434 SPVTMLAC*SLSTSAILVRRQALSFSSSISLFCIYSISASSNSCFFDLILVMPLSSLFSS 613
Query: 625 CLSSLWLMVVIESPIRALLEFC 560
C SS ++ SPI+ LLEFC
Sbjct: 614 CFSSFTDRLLTASPIKCLLEFC 679
Score = 55.1 bits (114), Expect(3) = 1e-026
Identities = 27/58 (46%), Positives = 32/58 (55%)
Frame = -1 / +2
Query: 496 AIVPAALELSLVAFLYLSMVPFTLLLAYS*RRPRLEKXXXXXXXXXXXXXXXAFLRRP 323
+++ A ELS + FLYLS+V LLLAYS*RRPRLEK AF P
Sbjct: 740 SVIEAVFELSELTFLYLSIVDLILLLAYS*RRPRLEKTMRETSASQRTDNS*AFFNSP 913
Score = 29.0 bits (57), Expect(2) = 7e-027
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1 / -2
Query: 667 QKRTMCCVLKSSTCREGKWSCRM 735
Q+ CC LK S CR+G+ S +M
Sbjct: 572 QRSMNCC*LKLSICRKGRLSWKM 504
Score = 24.9 bits (48), Expect(3) = 1e-026
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3 / +1
Query: 575 PVGVLQVNDLLPQPSRFLLVMLNGDLCNRTS 483
PV +L +LL FLL++L D C+R S
Sbjct: 664 PVRIL*QLNLLTHLC*FLLIILGIDFCDRGS 756
>gb|AY359607.1| Populus yunnanensis sex male AGAMOUS (AG2) gene, partial cds
Length = 227
Score = 135 bits (290), Expect = 5e-031
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 225
>gb|AY359609.1| Populus tomentosa sex female AGAMOUS (AG2) gene, partial cds
Length = 227
Score = 135 bits (290), Expect = 5e-031
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 225
>gb|AY615965.1| Populus balsamifera subsp. trichocarpa APETALA1-like MADS-box
PTAP1-1a mRNA, complete cds; alternatively spliced
Length = 1344
Score = 104 bits (222), Expect(2) = 1e-030
Identities = 41/60 (68%), Positives = 52/60 (86%)
Frame = +3 / +2
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
G+G+ ++KRIEN NRQVTF KRR GLLKKA+E+SVLCDAEVALI FS +G+L+EY+ N+
Sbjct: 389 GRGRVQLKRIENKINRQVTFSKRRTGLLKKAHEISVLCDAEVALIFFSHKGKLFEYSTNA 568
Score = 49.6 bits (102), Expect(2) = 1e-030
Identities = 21/62 (33%), Positives = 40/62 (64%)
Frame = +3 / +2
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E RL+ ++ LQ ++R +G+ + ++S KEL++LE ++D AL IR +KN ++ +
Sbjct: 665 EYNRLKAKVELLQRNHRHYLGEDLDSVSLKELQNLEQQIDTALKLIRERKNHLMYQSISE 844
Query: 705 MQ 710
+Q
Sbjct: 845 LQ 850
>gb|AY359611.1| Populus tomentosa sex male AGAMOUS (AG2) gene, partial cds
Length = 227
Score = 133 bits (285), Expect = 3e-030
Identities = 55/59 (93%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEY+N+
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSND 225
>gb|AY359612.1| Populus tomentosa sex male AGAMOUS (AG1) gene, partial cds
Length = 227
Score = 133 bits (285), Expect = 3e-030
Identities = 55/59 (93%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEVALIVFSSRGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNN 225
>gb|CA925124.1|CA925124 MTU7TL.P13.H01 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 702
Score = 132 bits (283), Expect = 5e-030
Identities = 53/98 (54%), Positives = 80/98 (81%)
Frame = +3 / -1
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A++S+
Sbjct: 672 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 493
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 492 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 379
>gb|CV231279.1|CV231279 WS0194.B21_A22 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0194_A22 3', mRNA sequence
Length = 935
Score = 132 bits (283), Expect = 5e-030
Identities = 53/98 (54%), Positives = 80/98 (81%)
Frame = +3 / -3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A++S+
Sbjct: 912 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 733
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 732 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 619
>gb|AF377868.1| Populus tremuloides MADS-box protein PTM5 mRNA, complete cds
Length = 1196
Score = 132 bits (283), Expect = 5e-030
Identities = 53/98 (54%), Positives = 80/98 (81%)
Frame = +3 / +3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A++S+
Sbjct: 306 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 485
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 486 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 599
>gb|BU876515.1|BU876515 V021F11 Populus flower cDNA library Populus trichocarpa cDNA 5
prime, mRNA sequence
Length = 513
Score = 132 bits (282), Expect = 6e-030
Identities = 53/98 (54%), Positives = 79/98 (80%)
Frame = +3 / +3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S+
Sbjct: 120 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 299
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 300 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 413
>gb|CV242362.1|CV242362 WS02514.B21.1_N17 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02514_N17 3', mRNA sequence
Length = 912
Score = 132 bits (282), Expect = 6e-030
Identities = 53/98 (54%), Positives = 79/98 (80%)
Frame = +3 / -3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S+
Sbjct: 901 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 722
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 721 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 608
>gb|DT472398.1|DT472398 WS01226.BR.1_F17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01226_F17 5', mRNA sequence
Length = 886
Score = 132 bits (282), Expect = 6e-030
Identities = 53/98 (54%), Positives = 79/98 (80%)
Frame = +3 / +3
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S+
Sbjct: 501 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 680
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 681 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 794
>gb|DT524337.1|DT524337 WS02042.C21.1_F18 PTxN-IB-N-A-11 Populus trichocarpa x Populus
nigra cDNA clone WS02042_F18 3', mRNA sequence
Length = 884
Score = 132 bits (282), Expect = 6e-030
Identities = 53/98 (54%), Positives = 79/98 (80%)
Frame = +3 / -1
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A+ S+
Sbjct: 884 RGKTQMRRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASTSM 705
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 704 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 591
>gb|AY359608.1| Populus yunnanensis sex male AGAMOUS (AG1) gene, partial cds
Length = 227
Score = 132 bits (282), Expect = 6e-030
Identities = 54/59 (91%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSTRGRLYEYSNN 225
>gb|AY359610.1| Populus tomentosa sex female AGAMOUS (AG1) gene, partial cds
Length = 227
Score = 132 bits (282), Expect = 6e-030
Identities = 54/59 (91%), Positives = 58/59 (98%)
Frame = +3 / +1
Query: 249 GKGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANN 425
G+GK EIKRIENTTNRQVTFCKRR+GLLKKAYELSVLCDAEVALIVFS+RGRLYEY+NN
Sbjct: 49 GRGKVEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALIVFSTRGRLYEYSNN 225
>gb|CK098276.1|CK098276 A010P29.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A010P29 5', mRNA sequence
Length = 382
Score = 130 bits (279), Expect = 2e-029
Identities = 53/73 (72%), Positives = 66/73 (90%)
Frame = +3 / +2
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEVALIVFS+RG+LYE++++S+
Sbjct: 65 RGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSTRGKLYEFSSSSM 244
Query: 432 KGTIERYKKATSD 470
TIERY+K D
Sbjct: 245 NRTIERYQKRAKD 283
>gb|CA924456.1|CA924456 MTU7CL.P5.H08 Aspen leaf cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 693
Score = 129 bits (277), Expect = 3e-029
Identities = 52/98 (53%), Positives = 79/98 (80%)
Frame = +3 / -1
Query: 252 KGKTEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSV 431
+GKT+++RIEN T+RQV F KRRNGLLKKA+ELSVLCDAEVALIVFS RG+LYE+A++S+
Sbjct: 672 RGKTQMRRIENATSRQVPFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASSSM 493
Query: 432 KGTIERYKKATSDNSSAAGTIAEVTIQHYKQESARLRQ 545
+ TIERY++ +N++ + + +Q ++ ++ +++
Sbjct: 492 QETIERYRRHVKENNTNKQPVEQNMLQLKEEAASMIKK 379
>gb|BI137078.1|BI137078 F079P74Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 552
Score = 81.7 bits (172), Expect(2) = 1e-028
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +3 / +1
Query: 294 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
RQVTF KRR GLLKKA+E+SVLCDA+VA+IVFS++G+L+EY+ +S
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDS 135
Score = 65.7 bits (137), Expect(2) = 1e-028
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +3 / +1
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E +LR ++ LQ + R G + +S+KEL+HLE ++D AL +R++KN ++ +
Sbjct: 232 EHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTALKSVRSRKNQLVHESLAE 411
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
MQ++E LQ+ N L +V + +A
Sbjct: 412 MQKKEKALQDQNNILVEQVKKKLKA 486
>gb|BI136216.1|BI136216 F065P15Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 537
Score = 81.7 bits (172), Expect(2) = 1e-028
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +3 / +1
Query: 294 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
RQVTF KRR GLLKKA+E+SVLCDA+VA+IVFS++G+L+EY+ +S
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDS 135
Score = 65.7 bits (137), Expect(2) = 1e-028
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +3 / +1
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E +LR ++ LQ + R G + +S+KEL+HLE ++D AL +R++KN ++ +
Sbjct: 232 EHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTALKSVRSRKNQLVHESLAE 411
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
MQ++E LQ+ N L +V + +A
Sbjct: 412 MQKKEKALQDQNNILVEQVKKKLKA 486
>gb|BI137178.1|BI137178 F081P53Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 517
Score = 81.7 bits (172), Expect(2) = 1e-028
Identities = 32/45 (71%), Positives = 42/45 (93%)
Frame = +3 / +1
Query: 294 RQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS 428
RQVTF KRR GLLKKA+E+SVLCDA+VA+IVFS++G+L+EY+ +S
Sbjct: 1 RQVTFSKRRTGLLKKAHEISVLCDADVAVIVFSTKGKLFEYSTDS 135
Score = 65.7 bits (137), Expect(2) = 1e-028
Identities = 29/85 (34%), Positives = 51/85 (60%)
Frame = +3 / +1
Query: 525 ESARLRQQIVNLQNSNRALIGDSITTMSHKELKHLETRLDKALGKIRAKKNDVLCSEVEY 704
E +LR ++ LQ + R G + +S+KEL+HLE ++D AL +R++KN ++ +
Sbjct: 232 EHPKLRARVELLQRNLRNYTGQDLDPLSYKELQHLEQKIDTALKSVRSRKNQLVHESLAE 411
Query: 705 MQRREMELQNDNLYLRSRVDENERA 779
MQ++E LQ+ N L +V + +A
Sbjct: 412 MQKKEKALQDQNNILVEQVKKKLKA 486
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 614,008,090
Number of Sequences: 369679
Number of extensions: 8907976
Number of successful extensions: 48982
Number of sequences better than 1.0e-020: 109
length of database: 67,802,888
effective HSP length: 53
effective length of database: 48,209,901
effective search space used: 19139330697
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)