TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2594211.2.1
(668 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|BU815416.1|BU815416 N041D08 Populus bark cDNA library Po... 106 2e-022
gb|CF119781.1|CF119781 MTU10CS.P6.C03 Aspen stem cDNA Libra... 106 2e-022
gb|CV227026.1|CV227026 WS0165.B21_P17 PT-DX-A-7 Populus tri... 106 2e-022
gb|CV240999.1|CV240999 WS02510.B21_P02 PT-MB-N-A-15 Populus... 105 2e-022
gb|DT493211.1|DT493211 WS02553.C21_L14 PT-MB-N-A-15 Populus... 105 2e-022
gb|DT485712.1|DT485712 WS02528.B21_P11 PT-MB-N-A-15 Populus... 105 2e-022
gb|DT482653.1|DT482653 WS02520.B21_G18 PT-MB-N-A-15 Populus... 105 2e-022
gb|DT485011.1|DT485011 WS02527.B21_A18 PT-MB-N-A-15 Populus... 104 2e-022
gb|CN524661.1|CN524661 GQ015M15.T3_F10 GQ015 Populus tricho... 105 4e-022
gb|CV130528.1|CV130528 B9SP03c05 Populus stem seasonal libr... 105 4e-022
gb|CV261926.1|CV261926 WS02018.B21_C16 PTxN-IB-N-A-11 Popul... 105 4e-022
gb|DT477598.1|DT477598 WS02520.BR_G18 PT-MB-N-A-15 Populus ... 105 4e-022
gb|DT480457.1|DT480457 WS02528.BR_P11 PT-MB-N-A-15 Populus ... 105 4e-022
gb|DT490252.1|DT490252 WS02544.B21_H07 PT-MB-N-A-15 Populus... 105 4e-022
gb|DT505767.1|DT505767 WS01811.C21_M21 PTxD-IL-N-A-9 Populu... 105 4e-022
gb|DT510215.1|DT510215 WS02425.BR_O13 PTxD-ICC-N-A-14 Popul... 105 4e-022
gb|DT514833.1|DT514833 WS02425.B21_O13 PTxD-ICC-N-A-14 Popu... 105 4e-022
gb|DT519500.1|DT519500 WS02441.B21_M17 PTxD-ICC-N-A-14 Popu... 105 4e-022
gb|BU812829.1|BU812829 N001H08 Populus bark cDNA library Po... 104 7e-022
gb|CV232228.1|CV232228 WS0196.B21_P01 PT-DX-N-A-10 Populus ... 103 1e-021
gb|BI071873.1|BI071873 C065P28U Populus strain T89 leaves P... 103 1e-021
gb|BU813204.1|BU813204 N006E10 Populus bark cDNA library Po... 103 1e-021
gb|BU815493.1|BU815493 N042D11 Populus bark cDNA library Po... 103 1e-021
gb|BU830279.1|BU830279 T006C07 Populus apical shoot cDNA li... 103 1e-021
gb|BU831965.1|BU831965 T027H03 Populus apical shoot cDNA li... 103 1e-021
gb|BU837829.1|BU837829 T106B06 Populus apical shoot cDNA li... 103 1e-021
gb|AY435101.1| Populus tremula x Populus tremuloides alpha-... 103 1e-021
gb|DT490961.1|DT490961 WS02546.C21.1_G23 PT-MB-N-A-15 Popul... 102 3e-021
>gb|BU815416.1|BU815416 N041D08 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 620
Score = 106 bits (226), Expect = 2e-022
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSI 481
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P++
Sbjct: 249 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GPTL 416
>gb|CF119781.1|CF119781 MTU10CS.P6.C03 Aspen stem cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 612
Score = 106 bits (226), Expect = 2e-022
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = -3 / +2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSI 481
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P++
Sbjct: 419 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GPTL 586
>gb|CV227026.1|CV227026 WS0165.B21_P17 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_P17
3', mRNA sequence
Length = 889
Score = 106 bits (226), Expect = 2e-022
Identities = 41/56 (73%), Positives = 48/56 (85%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSI 481
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P++
Sbjct: 750 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GPTL 583
>gb|CV240999.1|CV240999 WS02510.B21_P02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02510_P02 3', mRNA sequence
Length = 750
Score = 105 bits (223), Expect(2) = 2e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 739 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 578
Score = 22.6 bits (43), Expect(2) = 2e-022
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / -2
Query: 185 YHPPIKHLW 159
YHPP+ LW
Sbjct: 254 YHPPLVFLW 228
>gb|DT493211.1|DT493211 WS02553.C21_L14 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02553_L14 3', mRNA sequence
Length = 784
Score = 105 bits (223), Expect(2) = 2e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 726 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 565
Score = 22.6 bits (43), Expect(2) = 2e-022
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / -1
Query: 185 YHPPIKHLW 159
YHPP+ LW
Sbjct: 241 YHPPLVFLW 215
>gb|DT485712.1|DT485712 WS02528.B21_P11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02528_P11 3', mRNA sequence
Length = 828
Score = 105 bits (223), Expect(2) = 2e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 644 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 483
Score = 22.6 bits (43), Expect(2) = 2e-022
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / -1
Query: 185 YHPPIKHLW 159
YHPP+ LW
Sbjct: 234 YHPPLVFLW 208
>gb|DT482653.1|DT482653 WS02520.B21_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_G18 3', mRNA sequence
Length = 843
Score = 105 bits (223), Expect(2) = 2e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 609 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 448
Score = 22.6 bits (43), Expect(2) = 2e-022
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / -3
Query: 185 YHPPIKHLW 159
YHPP+ LW
Sbjct: 124 YHPPLVFLW 98
>gb|DT485011.1|DT485011 WS02527.B21_A18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_A18 3', mRNA sequence
Length = 800
Score = 104 bits (222), Expect(2) = 2e-022
Identities = 41/53 (77%), Positives = 45/53 (84%)
Frame = -3 / -2
Query: 645 WGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 658 WGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 500
Score = 22.6 bits (43), Expect(2) = 2e-022
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = -1 / -1
Query: 185 YHPPIKHLW 159
YHPP+ LW
Sbjct: 176 YHPPLVFLW 150
>gb|CN524661.1|CN524661 GQ015M15.T3_F10 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M15_F10 5', mRNA sequence
Length = 755
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / +1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 244 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 405
>gb|CV130528.1|CV130528 B9SP03c05 Populus stem seasonal library Populus deltoides cDNA,
mRNA sequence
Length = 910
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 705 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 866
>gb|CV261926.1|CV261926 WS02018.B21_C16 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02018_C16 3', mRNA sequence
Length = 824
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 726 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 565
>gb|DT477598.1|DT477598 WS02520.BR_G18 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02520_G18 5', mRNA sequence
Length = 845
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 645 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 806
>gb|DT480457.1|DT480457 WS02528.BR_P11 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02528_P11 5', mRNA sequence
Length = 882
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / +2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 647 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 808
>gb|DT490252.1|DT490252 WS02544.B21_H07 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02544_H07 3', mRNA sequence
Length = 702
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 267 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 106
>gb|DT505767.1|DT505767 WS01811.C21_M21 PTxD-IL-N-A-9 Populus trichocarpa x Populus
deltoides cDNA clone WS01811_M21 3', mRNA sequence
Length = 781
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 721 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 560
>gb|DT510215.1|DT510215 WS02425.BR_O13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_O13 5', mRNA sequence
Length = 776
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / +2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 611 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 772
>gb|DT514833.1|DT514833 WS02425.B21_O13 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02425_O13 3', mRNA sequence
Length = 864
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 723 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 562
>gb|DT519500.1|DT519500 WS02441.B21_M17 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02441_M17 3', mRNA sequence
Length = 863
Score = 105 bits (223), Expect = 4e-022
Identities = 41/54 (75%), Positives = 46/54 (85%)
Frame = -3 / -1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P
Sbjct: 722 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GP 561
>gb|BU812829.1|BU812829 N001H08 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 251
Score = 104 bits (221), Expect = 7e-022
Identities = 41/55 (74%), Positives = 47/55 (85%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPS 484
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P+
Sbjct: 87 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFL*GPT 251
>gb|CV232228.1|CV232228 WS0196.B21_P01 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0196_P01 3', mRNA sequence
Length = 694
Score = 103 bits (220), Expect = 1e-021
Identities = 40/56 (71%), Positives = 47/56 (83%)
Frame = -3 / -3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSI 481
+WGQNWQS L+GQ+LSF+VTTSDGR+VVS NAAP W FGQTFSGAQF * P++
Sbjct: 689 NWGQNWQSTNYLNGQSLSFKVTTSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GPTL 522
>gb|BI071873.1|BI071873 C065P28U Populus strain T89 leaves Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 328
Score = 103 bits (219), Expect = 1e-021
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS N AP W FGQTFSGAQF * P
Sbjct: 48 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQFR*GP 209
>gb|BU813204.1|BU813204 N006E10 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 737
Score = 103 bits (219), Expect = 1e-021
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS N AP W FGQTFSGAQF * P
Sbjct: 369 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQFR*GP 530
>gb|BU815493.1|BU815493 N042D11 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 685
Score = 103 bits (219), Expect = 1e-021
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS N AP W FGQTFSGAQF * P
Sbjct: 522 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQFR*GP 683
>gb|BU830279.1|BU830279 T006C07 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 660
Score = 103 bits (219), Expect = 1e-021
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS N AP W FGQTFSGAQF * P
Sbjct: 36 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQFR*GP 197
>gb|BU831965.1|BU831965 T027H03 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 331
Score = 103 bits (219), Expect = 1e-021
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS N AP W FGQTFSGAQF * P
Sbjct: 36 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQFR*GP 197
>gb|BU837829.1|BU837829 T106B06 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 659
Score = 103 bits (219), Expect = 1e-021
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +2
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS N AP W FGQTFSGAQF * P
Sbjct: 116 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQFR*GP 277
>gb|AY435101.1| Populus tremula x Populus tremuloides alpha-expansin 3 (Exp3) mRNA,
complete cds
Length = 1351
Score = 103 bits (219), Expect = 1e-021
Identities = 40/54 (74%), Positives = 45/54 (83%)
Frame = -3 / +1
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TP 487
+WGQNWQSN L+GQ+LSF+VTTSDGR+VVS N AP W FGQTFSGAQF * P
Sbjct: 643 NWGQNWQSNNYLNGQSLSFKVTTSDGRTVVSYNVAPSSWSFGQTFSGAQFR*GP 804
>gb|DT490961.1|DT490961 WS02546.C21.1_G23 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02546_G23 3', mRNA sequence
Length = 851
Score = 102 bits (217), Expect = 3e-021
Identities = 42/69 (60%), Positives = 49/69 (71%)
Frame = -3 / -3
Query: 648 HWGQNWQSNTLLDGQALSFRVTTSDGRSVVSSNAAPRGWGFGQTFSGAQFN*TPSIVPAA 469
+WGQNWQSN L+GQ+LSF+V SDGR+VVS NAAP W FGQTFSGAQF * P +
Sbjct: 765 NWGQNWQSNNYLNGQSLSFKVPPSDGRTVVSYNAAPSSWSFGQTFSGAQFR*GPYLPRWP 586
Query: 468 SSRPSSTRC 442
S P + C
Sbjct: 585 PSSPHTKVC 559
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 291,441,113
Number of Sequences: 369679
Number of extensions: 3913669
Number of successful extensions: 46720
Number of sequences better than 1.0e-020: 29
length of database: 67,802,888
effective HSP length: 51
effective length of database: 48,949,259
effective search space used: 8370323289
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)