TBLASTX 2.2.10 [Oct-19-2004]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 2591032.2.1
(735 letters)
Database: Populus_nucl_with_EST.fasta
369,679 sequences; 203,408,664 total letters
Score E
Sequences producing significant alignments: (bits) Value
gb|DT523539.1|DT523539 WS02039.B21_P11 PTxN-IB-N-A-11 Popul... 312 4e-087
gb|DT485334.1|DT485334 WS02527.B21_O22 PT-MB-N-A-15 Populus... 312 4e-087
gb|DT515685.1|DT515685 WS02429.B21.1_D22 PTxD-ICC-N-A-14 Po... 312 4e-087
gb|CV232433.1|CV232433 WS0197.B21_J03 PT-DX-N-A-10 Populus ... 312 4e-087
gb|DT482867.1|DT482867 WS02521.B21_A02 PT-MB-N-A-15 Populus... 312 4e-086
gb|CV261322.1|CV261322 WS02016.B21_H12 PTxN-IB-N-A-11 Popul... 296 2e-082
gb|DN494990.1|DN494990 N009H07.5pR Populus bark cDNA librar... 290 8e-078
gb|DT507221.1|DT507221 WS02417.BR_K22 PTxD-ICC-N-A-14 Popul... 262 4e-072
gb|DT511863.1|DT511863 WS02417.B21_K22 PTxD-ICC-N-A-14 Popu... 262 4e-072
gb|CA931263.1|CA931263 MTU2TA.P4.H08 Aspen apex cDNA Librar... 265 2e-070
gb|CK098382.1|CK098382 A012P77.5pR Hybrid aspen plasmid lib... 247 2e-068
gb|CN523462.1|CN523462 GQ015M10.T3_B08 GQ015 Populus tricho... 252 2e-066
gb|DT476893.1|DT476893 WS01231.B21_D17 PT-GT-FL-A-3 Populus... 250 6e-066
gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA li... 242 2e-063
gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem c... 173 2e-056
gb|AI162152.1|AI162152 A012P77U Hybrid aspen plasmid librar... 215 2e-055
gb|CF228348.1|CF228348 PtaXM0011H7H0715 Poplar cDNA library... 215 3e-055
gb|CV261185.1|CV261185 WS02016.B21_B13 PTxN-IB-N-A-11 Popul... 213 1e-054
gb|CV241963.1|CV241963 WS02513.B21_M01 PT-MB-N-A-15 Populus... 212 2e-054
gb|DN489293.1|DN489293 T021A10.3pR Populus shoot meristem c... 140 5e-048
gb|BI137613.1|BI137613 F089P39Y Populus flower cDNA library... 140 5e-048
gb|BI135709.1|BI135709 F057P33Y Populus flower cDNA library... 140 2e-044
gb|CV259744.1|CV259744 WS02012.B21_C15 PTxN-IB-N-A-11 Popul... 176 1e-043
gb|DN486644.1|DN486644 P047G09.3pR Populus petioles cDNA li... 173 9e-043
gb|CX168744.1|CX168744 E01_69-81_09.ab1 leaf inoculated wit... 172 2e-042
gb|BI137634.1|BI137634 F089P73Y Populus flower cDNA library... 140 7e-042
gb|DT520021.1|DT520021 WS02446.B21.1_F15 PTxD-ICC-N-A-14 Po... 169 2e-041
gb|CV264069.1|CV264069 WS02023.B21_I14 PTxN-IB-N-A-11 Popul... 149 2e-035
gb|DT481483.1|DT481483 WS02532.BR_A02 PT-MB-N-A-15 Populus ... 146 2e-034
gb|DT486813.1|DT486813 WS02532.B21_A02 PT-MB-N-A-15 Populus... 146 2e-034
gb|DV463015.1|DV463015 MTUNUL1.P10.F03 NUL Populus fremonti... 82 2e-032
gb|CV254493.1|CV254493 WS0241.B21_G02 PTxD-ICC-N-A-14 Popul... 94 3e-032
gb|DT518009.1|DT518009 WS02435.B21_P01 PTxD-ICC-N-A-14 Popu... 94 3e-032
gb|DT517326.1|DT517326 WS02433.B21_P21 PTxD-ICC-N-A-14 Popu... 91 8e-031
gb|CF232477.1|CF232477 PtaJXO0011A11A1101 Poplar cDNA libra... 89 2e-030
gb|BI129456.1|BI129456 G090P88Y Populus cambium cDNA librar... 131 4e-030
gb|BP933399.1|BP933399 BP933399 full-length enriched poplar... 129 2e-029
gb|DN489864.1|DN489864 T087C12.3pR Populus shoot meristem c... 116 1e-025
gb|CV233282.1|CV233282 WS0121.B21_J05 PT-GT-FL-A-3 Populus ... 115 3e-025
gb|BU813391.1|BU813391 N009H07 Populus bark cDNA library Po... 110 1e-023
gb|CK092664.1|CK092664 G090P88.3pR Populus tension wood cDN... 104 6e-022
gb|DN503105.1|DN503105 X057B02.5pR Populus wood cDNA librar... 67 1e-020
>gb|DT523539.1|DT523539 WS02039.B21_P11 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02039_P11 3', mRNA sequence
Length = 925
Score = 312 bits (675), Expect(2) = 4e-087
Identities = 125/137 (91%), Positives = 131/137 (95%)
Frame = -2 / -1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA
Sbjct: 703 LIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 524
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSF+ARDLIRGLLVKEPQ RLA KRGATEIKQHPFFEGVNWAL
Sbjct: 523 TLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWAL 344
Query: 374 IRCASPPEVPKPVEIER 324
IRCA+PPE+PKPVEIER
Sbjct: 343 IRCATPPEIPKPVEIER 293
Score = 237 bits (512), Expect(2) = 6e-063
Identities = 102/136 (75%), Positives = 112/136 (82%)
Frame = +1 / +3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SISTG G SGG+A ++AQFTPSKKGCC ISVAPRL A+ C GSFTS+PL+RSLA KLT
Sbjct: 297 SISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLTT 476
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG R WP TLN+VAR DPLKGVFPN SSY+ PKVHQSTALP PSPLMISGA+YS
Sbjct: 477 GDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSW 656
Query: 688 VPTNDIDRASLGSAMS 735
VPT DID AS+GSAMS
Sbjct: 657 VPTKDIDLASVGSAMS 704
Score = 102 bits (218), Expect = 2e-021
Identities = 51/127 (40%), Positives = 71/127 (55%)
Frame = -1 / -3
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
AHSRA R V+V W+ RV G DHQ W+ LVD + +RE++ QGI +P
Sbjct: 704 AHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSLQGIWKPS 525
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
H VQC WPA+++P + Q GS +G AC+ A +Q + ++A LL* RELG
Sbjct: 524 HIVQCCWPASSIPRITSCQFCS*GSHKGFACKRTTA*ISIQTRRN*NKATPLL*RRELGI 345
Query: 375 HKVRKPT 355
+ + PT
Sbjct: 344 NTLCYPT 324
Score = 92.3 bits (195), Expect(2) = 5e-024
Identities = 41/96 (42%), Positives = 58/96 (60%)
Frame = +3 / +2
Query: 447 LLGLLHKQTPDQIPRREADGRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGP 626
+L +KQTP +IP + D E++ LAN+IEQ G V+ SLE PE + + + + P
Sbjct: 416 MLWFFYKQTPYEIPSCKTDNW*FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSP 595
Query: 627 PVDGAAMALAFDDLGGQVLVRPNERHRPCVAGLCYE 734
PV+ +M DDL Q+LV N+RH PC+ LCYE
Sbjct: 596 PVNSTSMTFTLDDLRCQILVGSNKRH*PCICWLCYE 703
Score = 38.6 bits (78), Expect(2) = 5e-024
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3 / +2
Query: 324 PLDLDRLWYLRWACAPYERPIHALKEGMLL 413
PL+L+ L LRW Y PIHA KEG+LL
Sbjct: 293 PLNLNWLRDLRWGSTAY*CPIHAFKEGVLL 382
Score = 29.9 bits (59), Expect(2) = 4e-087
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 260 QKGVDGYLEFGFF*Q 216
QKG D YLEF FF*Q
Sbjct: 235 QKGSDNYLEFDFF*Q 191
Score = 24.0 bits (46), Expect(2) = 6e-063
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 216 LLEETKLQVAVDTFL 260
LL+E KLQV + TFL
Sbjct: 191 LLKEIKLQVIIRTFL 235
>gb|DT485334.1|DT485334 WS02527.B21_O22 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02527_O22 3', mRNA sequence
Length = 904
Score = 312 bits (675), Expect(2) = 4e-087
Identities = 125/137 (91%), Positives = 131/137 (95%)
Frame = -2 / -1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA
Sbjct: 631 LIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 452
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSF+ARDLIRGLLVKEPQ RLA KRGATEIKQHPFFEGVNWAL
Sbjct: 451 TLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWAL 272
Query: 374 IRCASPPEVPKPVEIER 324
IRCA+PPE+PKPVEIER
Sbjct: 271 IRCATPPEIPKPVEIER 221
Score = 237 bits (512), Expect(2) = 6e-063
Identities = 102/136 (75%), Positives = 112/136 (82%)
Frame = +1 / +3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SISTG G SGG+A ++AQFTPSKKGCC ISVAPRL A+ C GSFTS+PL+RSLA KLT
Sbjct: 225 SISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLTT 404
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG R WP TLN+VAR DPLKGVFPN SSY+ PKVHQSTALP PSPLMISGA+YS
Sbjct: 405 GDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSW 584
Query: 688 VPTNDIDRASLGSAMS 735
VPT DID AS+GSAMS
Sbjct: 585 VPTKDIDLASVGSAMS 632
Score = 121 bits (258), Expect = 6e-027
Identities = 58/137 (42%), Positives = 80/137 (58%)
Frame = +3 / +2
Query: 324 PLDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREAD 503
PL+L+ L L W Y PIHA KEG+LL G++ +L +KQTP +IP + D
Sbjct: 221 PLNLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTD 400
Query: 504 GRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVL 683
E++ LAN+IEQ G V+ SLE PE + + + + PPV+ +M DDL Q+L
Sbjct: 401 DW*FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQIL 580
Query: 684 VRPNERHRPCVAGLCYE 734
V N+RH PC+ LCYE
Sbjct: 581 VGSNKRH*PCICWLCYE 631
Score = 109 bits (233), Expect = 2e-023
Identities = 53/127 (41%), Positives = 72/127 (56%)
Frame = -1 / -3
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
AHSRA R V+V W+ RV G DHQ W+ LVD + +RE++ QGI +P
Sbjct: 632 AHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSLQGIWKPS 453
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
H VQC WPA+++P + RQ GS +G AC+ A +Q H ++A LL* RELG
Sbjct: 452 HIVQCCWPASSIPRITSRQFCS*GSHKGFACKRTTA*ISIQTRRH*NKATPLL*RRELGI 273
Query: 375 HKVRKPT 355
+ + PT
Sbjct: 272 NTLCYPT 252
Score = 29.9 bits (59), Expect(2) = 4e-087
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 260 QKGVDGYLEFGFF*Q 216
QKG D YLEF FF*Q
Sbjct: 163 QKGSDNYLEFDFF*Q 119
Score = 24.0 bits (46), Expect(2) = 6e-063
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 216 LLEETKLQVAVDTFL 260
LL+E KLQV + TFL
Sbjct: 119 LLKEIKLQVIIRTFL 163
>gb|DT515685.1|DT515685 WS02429.B21.1_D22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02429_D22 3', mRNA sequence
Length = 894
Score = 312 bits (675), Expect(2) = 4e-087
Identities = 125/137 (91%), Positives = 131/137 (95%)
Frame = -2 / -3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA
Sbjct: 625 LIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 446
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSF+ARDLIRGLLVKEPQ RLA KRGATEIKQHPFFEGVNWAL
Sbjct: 445 TLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWAL 266
Query: 374 IRCASPPEVPKPVEIER 324
IRCA+PPE+PKPVEIER
Sbjct: 265 IRCATPPEIPKPVEIER 215
Score = 237 bits (512), Expect(2) = 6e-063
Identities = 102/136 (75%), Positives = 112/136 (82%)
Frame = +1 / +3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SISTG G SGG+A ++AQFTPSKKGCC ISVAPRL A+ C GSFTS+PL+RSLA KLT
Sbjct: 219 SISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLTT 398
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG R WP TLN+VAR DPLKGVFPN SSY+ PKVHQSTALP PSPLMISGA+YS
Sbjct: 399 GDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSW 578
Query: 688 VPTNDIDRASLGSAMS 735
VPT DID AS+GSAMS
Sbjct: 579 VPTKDIDLASVGSAMS 626
Score = 121 bits (258), Expect = 6e-027
Identities = 58/137 (42%), Positives = 80/137 (58%)
Frame = +3 / +2
Query: 324 PLDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREAD 503
PL+L+ L L W Y PIHA KEG+LL G++ +L +KQTP +IP + D
Sbjct: 215 PLNLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTD 394
Query: 504 GRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVL 683
E++ LAN+IEQ G V+ SLE PE + + + + PPV+ +M DDL Q+L
Sbjct: 395 DW*FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQIL 574
Query: 684 VRPNERHRPCVAGLCYE 734
V N+RH PC+ LCYE
Sbjct: 575 VGSNKRH*PCICWLCYE 625
Score = 109 bits (233), Expect = 2e-023
Identities = 53/127 (41%), Positives = 72/127 (56%)
Frame = -1 / -2
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
AHSRA R V+V W+ RV G DHQ W+ LVD + +RE++ QGI +P
Sbjct: 626 AHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSLQGIWKPS 447
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
H VQC WPA+++P + RQ GS +G AC+ A +Q H ++A LL* RELG
Sbjct: 446 HIVQCCWPASSIPRITSRQFCS*GSHKGFACKRTTA*ISIQTRRH*NKATPLL*RRELGI 267
Query: 375 HKVRKPT 355
+ + PT
Sbjct: 266 NTLCYPT 246
Score = 29.9 bits (59), Expect(2) = 4e-087
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 260 QKGVDGYLEFGFF*Q 216
QKG D YLEF FF*Q
Sbjct: 157 QKGSDNYLEFDFF*Q 113
Score = 24.0 bits (46), Expect(2) = 6e-063
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 216 LLEETKLQVAVDTFL 260
LL+E KLQV + TFL
Sbjct: 113 LLKEIKLQVIIRTFL 157
>gb|CV232433.1|CV232433 WS0197.B21_J03 PT-DX-N-A-10 Populus trichocarpa cDNA clone
WS0197_J03 3', mRNA sequence
Length = 745
Score = 312 bits (675), Expect(2) = 4e-087
Identities = 125/137 (91%), Positives = 131/137 (95%)
Frame = -2 / -1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA
Sbjct: 679 LIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 500
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSF+ARDLIRGLLVKEPQ RLA KRGATEIKQHPFFEGVNWAL
Sbjct: 499 TLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWAL 320
Query: 374 IRCASPPEVPKPVEIER 324
IRCA+PPE+PKPVEIER
Sbjct: 319 IRCATPPEIPKPVEIER 269
Score = 237 bits (512), Expect(2) = 6e-063
Identities = 102/136 (75%), Positives = 112/136 (82%)
Frame = +1 / +3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SISTG G SGG+A ++AQFTPSKKGCC ISVAPRL A+ C GSFTS+PL+RSLA KLT
Sbjct: 273 SISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLTT 452
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG R WP TLN+VAR DPLKGVFPN SSY+ PKVHQSTALP PSPLMISGA+YS
Sbjct: 453 GDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSW 632
Query: 688 VPTNDIDRASLGSAMS 735
VPT DID AS+GSAMS
Sbjct: 633 VPTKDIDLASVGSAMS 680
Score = 125 bits (267), Expect = 4e-028
Identities = 59/137 (43%), Positives = 81/137 (59%)
Frame = +3 / +2
Query: 324 PLDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREAD 503
PL+L+ L L W Y PIHA KEG+LL G++ +L +KQTP +IP + D
Sbjct: 269 PLNLNWLRDLGWGSTAY*CPIHAFKEGVLLYFSGASFGC*SMLWFFYKQTPYEIPSCKTD 448
Query: 504 GRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVL 683
R E++ LAN+IEQ G V+ SLE PE + + + + PPV+ +M DDL Q+L
Sbjct: 449 NR*FWESKRLANNIEQCGSVSRSLEGSFPE*EFI*KNSKSPPVNSTSMTFTLDDLRCQIL 628
Query: 684 VRPNERHRPCVAGLCYE 734
V N+RH PC+ LCYE
Sbjct: 629 VGSNKRH*PCICWLCYE 679
Score = 108 bits (231), Expect = 3e-023
Identities = 53/127 (41%), Positives = 72/127 (56%)
Frame = -1 / -3
Query: 735 AHSRAQRRTVDVVRWDARVPGPRDHQRRGPWQRRRLVDLRGILVRAAVREDAFQGIQQPG 556
AHSRA R V+V W+ RV G DHQ W+ LVD + +RE++ QGI +P
Sbjct: 680 AHSRANRCKVNVFCWNPRVFGT*DHQG*RSWKCC*LVDFWNFSI*TLIRENSLQGIWKPS 501
Query: 555 HAVQCHWPAAALPGVPGRQLLGEGSDQGSACEGAPATAGLQAWSHGDQAASLL*GRELGA 376
H VQC WPA+++P + G Q GS +G AC+ A +Q H ++A LL* RELG
Sbjct: 500 HIVQCCWPASSIPRITGCQFCS*GSHKGFACKRTTA*ISIQTRRH*NKATPLL*RRELGI 321
Query: 375 HKVRKPT 355
+ + PT
Sbjct: 320 NTLCYPT 300
Score = 29.9 bits (59), Expect(2) = 4e-087
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 260 QKGVDGYLEFGFF*Q 216
QKG D YLEF FF*Q
Sbjct: 211 QKGSDNYLEFDFF*Q 167
Score = 24.0 bits (46), Expect(2) = 6e-063
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +2
Query: 216 LLEETKLQVAVDTFL 260
LL+E KLQV + TFL
Sbjct: 167 LLKEIKLQVIIRTFL 211
>gb|DT482867.1|DT482867 WS02521.B21_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02521_A02 3', mRNA sequence
Length = 749
Score = 312 bits (676), Expect(2) = 4e-086
Identities = 124/137 (90%), Positives = 131/137 (95%)
Frame = -2 / -1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA
Sbjct: 662 LMAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRA 483
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQ LRFPE P VSF+ RDLIRGLLVKEPQ RLAYKRGATEIKQHPFFEGVNWAL
Sbjct: 482 TLFNVVGQPLRFPESPVVSFAPRDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWAL 303
Query: 374 IRCASPPEVPKPVEIER 324
IRCA+PPE+PKPVEIER
Sbjct: 302 IRCATPPEIPKPVEIER 252
Score = 243 bits (524), Expect(2) = 1e-064
Identities = 105/137 (76%), Positives = 114/137 (83%)
Frame = +1 / +1
Query: 325 LSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLT 504
LSISTGFG SGG+A ++AQFTPSKKGCCLISVAPRL A+ C GSFTS+PLIRSL KLT
Sbjct: 253 LSISTGFGISGGVAQRINAQFTPSKKGCCLISVAPRLYANLCCGSFTSKPLIRSLGAKLT 432
Query: 505 AGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYS 684
G SG R WP TLN+VAR +PLKGV PN SSY+ PKVHQSTALP PSPLMISGARYS
Sbjct: 433 TGDSGNRRGWPTTLNNVARFPEPLKGVLPNKSSYRKIPKVHQSTALP*PSPLMISGARYS 612
Query: 685 CVPTNDIDRASLGSAMS 735
VPTNDID AS+GSAMS
Sbjct: 613 WVPTNDIDLASVGSAMS 663
Score = 127 bits (271), Expect = 1e-028
Identities = 55/137 (40%), Positives = 84/137 (61%)
Frame = +3 / +3
Query: 324 PLDLDRLWYLRWACAPYERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREAD 503
PL+L+ LW L W Y PIH KEGMLL+ + V Q +L +KQTP +IP + +
Sbjct: 252 PLNLNWLWDLGWGSTAY*CPIHTFKEGMLLNFSCPSFVCQSMLRFFYKQTPYKIPWCKTN 431
Query: 504 GRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVL 683
E++ LAN+IEQ G ++ +L+ + +L+ + P+ PP++ +M DDL Q+L
Sbjct: 432 NW*FWESKRLANNIEQCGSISRTLKGSFTK*ELI*KDPKSPPINSTSMTFTLDDLRSQIL 611
Query: 684 VRPNERHRPCVAGLCYE 734
V PN+RH PC++ LC+E
Sbjct: 612 VGPNKRH*PCISWLCHE 662
Score = 26.3 bits (51), Expect(2) = 4e-086
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 260 QKGVDGYLEFGFF*Q 216
QKG + YLEF FF*+
Sbjct: 194 QKGSENYLEFDFF*K 150
Score = 24.0 bits (46), Expect(2) = 1e-064
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +2 / +2
Query: 197 CKKNHMFARRNQTPSSRRHL 256
CK +F++RNQTP + ++L
Sbjct: 131 CKL**IFSKRNQTPDNFQNL 190
>gb|CV261322.1|CV261322 WS02016.B21_H12 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_H12 3', mRNA sequence
Length = 844
Score = 296 bits (641), Expect(2) = 2e-082
Identities = 118/132 (89%), Positives = 124/132 (93%)
Frame = -2 / -3
Query: 719 SDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNV 540
+DARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRA LFNV
Sbjct: 695 TDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRAPLFNV 516
Query: 539 IGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCAS 360
+GQ RFPE P VSF+ARDLIRGLLVKEPQ RLA KRGATEIKQHPFFEGVNWALIRCA+
Sbjct: 515 VGQPFRFPESPVVSFAARDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCAT 336
Query: 359 PPEVPKPVEIER 324
PPE+PKPVEIER
Sbjct: 335 PPEIPKPVEIER 300
Score = 224 bits (483), Expect(2) = 6e-059
Identities = 96/131 (73%), Positives = 106/131 (80%)
Frame = +1 / +1
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SISTG G SGG+A ++AQFTPSKKGCC ISVAPRL A+ C GSFTS+PL+RSLA KLT
Sbjct: 304 SISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLTT 483
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG R WP TLN+ AR DPLKGVFPN SSY+ PKVHQSTALP PSPLMISGA+YS
Sbjct: 484 GDSGNRKGWPTTLNNGARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISGAKYSW 663
Query: 688 VPTNDIDRASL 720
VPT DID AS+
Sbjct: 664 VPTKDIDLASV 696
Score = 81.7 bits (172), Expect(2) = 7e-021
Identities = 37/90 (41%), Positives = 54/90 (60%)
Frame = +3 / +3
Query: 447 LLGLLHKQTPDQIPRREADGRVLREAQLLANDIEQRGPVAGSLERRLPEQQLVQEYPEGP 626
+L +KQTP +IP + D E++ LAN+IEQ G V+ SLE PE + + + + P
Sbjct: 423 MLWFFYKQTPYEIPSCKTDNW*FWESKRLANNIEQWGSVSRSLEGSFPE*EFI*KNSKSP 602
Query: 627 PVDGAAMALAFDDLGGQVLVRPNERHRPCV 716
PV+ +M DDL Q+LV N+RH PC+
Sbjct: 603 PVNSTSMTFTLDDLRCQILVGSNKRH*PCI 692
Score = 38.6 bits (78), Expect(2) = 7e-021
Identities = 17/30 (56%), Positives = 20/30 (66%)
Frame = +3 / +3
Query: 324 PLDLDRLWYLRWACAPYERPIHALKEGMLL 413
PL+L+ L LRW Y PIHA KEG+LL
Sbjct: 300 PLNLNWLRDLRWGSTAY*CPIHAFKEGVLL 389
Score = 29.9 bits (59), Expect(2) = 2e-082
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -3
Query: 260 QKGVDGYLEFGFF*Q 216
QKG D YLEF FF*Q
Sbjct: 242 QKGSDNYLEFDFF*Q 198
Score = 24.0 bits (46), Expect(2) = 6e-059
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 216 LLEETKLQVAVDTFL 260
LL+E KLQV + TFL
Sbjct: 198 LLKEIKLQVIIRTFL 242
>gb|DN494990.1|DN494990 N009H07.5pR Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA clone N009H07 5', mRNA sequence
Length = 760
Score = 290 bits (627), Expect = 8e-078
Identities = 113/136 (83%), Positives = 127/136 (93%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP+ ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FL+ELL+GKTPFKGS NRA
Sbjct: 250 LVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRA 429
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TLFNV+GQQLRFP+ PA +++++DLIRGLLVKEPQ RL KRGATEIKQHPFFE VNWAL
Sbjct: 430 TLFNVVGQQLRFPDSPATAYASQDLIRGLLVKEPQHRLGVKRGATEIKQHPFFESVNWAL 609
Query: 374 IRCASPPEVPKPVEIE 327
IRC++PPEVPKPVE E
Sbjct: 610 IRCSTPPEVPKPVETE 657
Score = 207 bits (447), Expect = 6e-053
Identities = 91/136 (66%), Positives = 101/136 (74%)
Frame = +1 / -3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
S+STGFGTSGG+ HL+ AQFT SKKGCCLISVAP S C GS TS+P I+S A
Sbjct: 656 SVSTGFGTSGGVLHLIRAQFTLSKKGCCLISVAPLFTPSLC*GSLTSKPRIKSWLA*AVA 477
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG SC P TLN VAR +PL GV P +SS K P VHQSTALPWPSPL+ISGARYS
Sbjct: 476 GESGNLSCCPTTLNKVARFPEPLNGVLPYNSSCKKIPNVHQSTALPWPSPLIISGARYSW 297
Query: 688 VPTNDIDRASLGSAMS 735
VPT DIDRA++GSA S
Sbjct: 296 VPTKDIDRAAVGSATS 249
>gb|DT507221.1|DT507221 WS02417.BR_K22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K22 5', mRNA sequence
Length = 644
Score = 262 bits (566), Expect(2) = 4e-072
Identities = 104/115 (90%), Positives = 109/115 (94%)
Frame = -2 / +1
Query: 668 EIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSA 489
EIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSF+A
Sbjct: 19 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 198
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIER 324
RDLIRGLLVKEPQ RLA KRGATEIKQHPFFEGVNWALIRCA+PPE+PKPVEIER
Sbjct: 199 RDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 363
Score = 201 bits (434), Expect(2) = 3e-052
Identities = 86/117 (73%), Positives = 94/117 (80%)
Frame = +1 / -1
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SISTG G SGG+A ++AQFTPSKKGCC ISVAPRL A+ C GSFTS+PL+RSLA KLT
Sbjct: 359 SISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLTT 180
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGAR 678
G SG R WP TLN+VAR DPLKGVFPN SSY+ PKVHQSTALP PSPLMIS R
Sbjct: 179 GDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISSCR 9
Score = 29.9 bits (59), Expect(2) = 4e-072
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / +1
Query: 260 QKGVDGYLEFGFF*Q 216
QKG D YLEF FF*Q
Sbjct: 421 QKGSDNYLEFDFF*Q 465
Score = 24.0 bits (46), Expect(2) = 3e-052
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / -3
Query: 216 LLEETKLQVAVDTFL 260
LL+E KLQV + TFL
Sbjct: 465 LLKEIKLQVIIRTFL 421
>gb|DT511863.1|DT511863 WS02417.B21_K22 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02417_K22 3', mRNA sequence
Length = 644
Score = 262 bits (566), Expect(2) = 4e-072
Identities = 104/115 (90%), Positives = 109/115 (94%)
Frame = -2 / -1
Query: 668 EIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSA 489
EIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKGS NRATLFNV+GQ LRFPE P VSF+A
Sbjct: 626 EIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAA 447
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIER 324
RDLIRGLLVKEPQ RLA KRGATEIKQHPFFEGVNWALIRCA+PPE+PKPVEIER
Sbjct: 446 RDLIRGLLVKEPQHRLASKRGATEIKQHPFFEGVNWALIRCATPPEIPKPVEIER 282
Score = 201 bits (434), Expect(2) = 3e-052
Identities = 86/117 (73%), Positives = 94/117 (80%)
Frame = +1 / +1
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SISTG G SGG+A ++AQFTPSKKGCC ISVAPRL A+ C GSFTS+PL+RSLA KLT
Sbjct: 286 SISTGLGISGGVAQRINAQFTPSKKGCCFISVAPRLDANLCCGSFTSKPLMRSLAAKLTT 465
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGAR 678
G SG R WP TLN+VAR DPLKGVFPN SSY+ PKVHQSTALP PSPLMIS R
Sbjct: 466 GDSGNRRGWPTTLNNVARFPDPLKGVFPNKSSYRKIPKVHQSTALP*PSPLMISSCR 636
Score = 29.9 bits (59), Expect(2) = 4e-072
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = -2 / -1
Query: 260 QKGVDGYLEFGFF*Q 216
QKG D YLEF FF*Q
Sbjct: 224 QKGSDNYLEFDFF*Q 180
Score = 24.0 bits (46), Expect(2) = 3e-052
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3 / +3
Query: 216 LLEETKLQVAVDTFL 260
LL+E KLQV + TFL
Sbjct: 180 LLKEIKLQVIIRTFL 224
>gb|CA931263.1|CA931263 MTU2TA.P4.H08 Aspen apex cDNA Library Populus tremuloides cDNA,
mRNA sequence
Length = 491
Score = 265 bits (573), Expect = 2e-070
Identities = 103/122 (84%), Positives = 114/122 (93%)
Frame = -2 / +1
Query: 686 HEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYP 507
HEYLAPEIIKGEGHGSAVDWWTFG+FL+ELL+GKTPFKGS NRATLFNV+GQQLRFP+ P
Sbjct: 1 HEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPDSP 180
Query: 506 AVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
A S+++RDLIRGLLVKEPQQRL KRGATEI QHPFFEGVNWALIRC++PPEVP+PVE E
Sbjct: 181 ATSYASRDLIRGLLVKEPQQRLGVKRGATEI*QHPFFEGVNWALIRCSTPPEVPRPVETE 360
Query: 326 RP 321
P
Sbjct: 361 PP 366
Score = 179 bits (385), Expect = 2e-044
Identities = 80/121 (66%), Positives = 88/121 (72%)
Frame = +1 / -1
Query: 322 GLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKL 501
G S+STG GTSGG+ HL+ AQFTPSKKGCC ISVAP + C GSFTS+P I+S L
Sbjct: 365 GGSVSTGLGTSGGVLHLIRAQFTPSKKGCC*ISVAPLFTPNLC*GSFTSKPRIKSRLA*L 186
Query: 502 TAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARY 681
AG SG SC P TLN VAR +PL GV P +SS K P VHQSTALP PSPLMISGARY
Sbjct: 185 VAGESGNLSCCPTTLNRVARFPEPLNGVLPYNSSCKKMPNVHQSTALPCPSPLMISGARY 6
Query: 682 S 684
S
Sbjct: 5 S 3
>gb|CK098382.1|CK098382 A012P77.5pR Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA clone A012P77 5', mRNA sequence
Length = 614
Score = 247 bits (534), Expect(2) = 2e-068
Identities = 95/111 (85%), Positives = 104/111 (93%)
Frame = -2 / +2
Query: 698 FVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRF 519
F G+HEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKG+ NRATLFNV+GQ LRF
Sbjct: 164 FCGSHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRATLFNVVGQPLRF 343
Query: 518 PEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRC 366
PE P VSF+A+DLIRGLLVKEPQ RLAY+RGATEIKQHPFF+ +NWALIRC
Sbjct: 344 PESPTVSFAAKDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSINWALIRC 496
Score = 177 bits (382), Expect = 5e-044
Identities = 76/112 (67%), Positives = 84/112 (75%)
Frame = +1 / -3
Query: 373 MSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNS 552
MSAQ K GCC ISVAPRL*A RC GSFTS+PLI+S A KLT G SG + WP TLNS
Sbjct: 489 MSAQLML*KNGCCFISVAPRL*ARRCCGSFTSKPLIKSFAAKLTVGDSGNLNGWPTTLNS 310
Query: 553 VARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDID 708
VAR PLKGV PN SS +N P VHQSTALPWPSPL+ISGA+YSC P ++
Sbjct: 309 VARFPAPLKGVLPNKSS*RNIPNVHQSTALPWPSPLIISGAKYSCDPQKTLN 154
Score = 32.2 bits (64), Expect(2) = 2e-068
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = -2 / +3
Query: 734 LIAEPSDARSMSFVG 690
LIAEP++ARSMSFVG
Sbjct: 129 LIAEPTNARSMSFVG 173
>gb|CN523462.1|CN523462 GQ015M10.T3_B08 GQ015 Populus trichocarpa x Populus deltoides cDNA
clone GQ015M10_B08 5', mRNA sequence
Length = 732
Score = 252 bits (544), Expect = 2e-066
Identities = 99/123 (80%), Positives = 108/123 (87%)
Frame = -2 / +2
Query: 695 VGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFP 516
VGTHEY A EIIKGEGHGSAVDWWTFG+ ELLFGKTPFKG+ NRATLFNV+GQ LRFP
Sbjct: 20 VGTHEYXAXEIIKGEGHGSAVDWWTFGIXXXELLFGKTPFKGAGNRATLFNVVGQPLRFP 199
Query: 515 EYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPV 336
E P VSF+ARDLIRGLLVKEPQ RLAY+RGATEIKQHPFF+ +NWALIRC +PPEVPK
Sbjct: 200 ESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQSINWALIRCTNPPEVPKQA 379
Query: 335 EIE 327
+E
Sbjct: 380 IME 388
Score = 193 bits (416), Expect = 1e-048
Identities = 86/126 (68%), Positives = 90/126 (71%)
Frame = +1 / -1
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SI FGTSGG MSAQ K GCC ISVAPRL*A RC GSFTS+PLI+SLA KLT
Sbjct: 387 SIIACFGTSGGFVQRMSAQLML*KNGCCFISVAPRL*ARRCCGSFTSKPLIKSLAAKLTV 208
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSC 687
G SG + WP TLNSVAR PLKGV PN SS P VHQSTALPWPSPL+IS A YSC
Sbjct: 207 GDSGNLNGWPTTLNSVARFPAPLKGVLPNKSSXXXIPNVHQSTALPWPSPLIISXAXYSC 28
Query: 688 VPTNDI 705
VPT I
Sbjct: 27 VPTXXI 10
>gb|DT476893.1|DT476893 WS01231.B21_D17 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS01231_D17 3', mRNA sequence
Length = 992
Score = 250 bits (541), Expect = 6e-066
Identities = 97/140 (69%), Positives = 114/140 (81%)
Frame = -2 / -3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
++ EP+ ARS SFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FL+ELL+G+TPFKGS N
Sbjct: 669 VVVEPTSARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGSGNEE 490
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL NV+ + L+FP P VSF ARDLIRGLL+KEP RL +GA EIKQHPFF+G+NWAL
Sbjct: 489 TLSNVVSRSLKFPSNPIVSFHARDLIRGLLIKEPGDRLGSAKGAAEIKQHPFFDGLNWAL 310
Query: 374 IRCASPPEVPKPVEIERPSN 315
IRCA PPE+P ++ SN
Sbjct: 309 IRCAIPPELPNQCDVGIASN 250
Score = 171 bits (368), Expect = 4e-042
Identities = 79/140 (56%), Positives = 94/140 (67%)
Frame = +1 / +2
Query: 307 EG*FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRS 486
E FD + S G+SGG+AH + AQ PSKKGCCLIS AP SR GSF + PLI+S
Sbjct: 242 ENVFDAIPTSH*LGSSGGIAHRIRAQLRPSKKGCCLISAAPLADPSRSPGSFINNPLIKS 421
Query: 487 LAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMI 666
A KLT G G TL++V+ DPLKGV P +SS + P VHQSTALP PSPLMI
Sbjct: 422 RA*KLTIGLLGNLRLRDTTLDNVSSFPDPLKGVLPYNSSNRKIPNVHQSTALPCPSPLMI 601
Query: 667 SGARYSCVPTNDIDRASLGS 726
SGARYS VPT +++RA +GS
Sbjct: 602 SGARYSWVPTKELERALVGS 661
>gb|BU836496.1|BU836496 T087C12 Populus apical shoot cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 724
Score = 242 bits (523), Expect = 2e-063
Identities = 96/124 (77%), Positives = 107/124 (86%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP+DAR SFVGTHEYLAPEIIKGEGHG+AVDWWTFGVFLYELL+G TPFKGS N
Sbjct: 352 LVAEPTDARPNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGITPFKGSGNEE 531
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL NV+ + L+FP+ P VSF ARDLIR LLVKEP+ RL +GATEIKQHPFFEG+NWAL
Sbjct: 532 TLANVVSESLKFPDSPLVSFQARDLIRELLVKEPENRLGTHKGATEIKQHPFFEGLNWAL 711
Query: 374 IRCA 363
IRCA
Sbjct: 712 IRCA 723
Score = 168 bits (362), Expect = 3e-041
Identities = 80/124 (64%), Positives = 87/124 (70%)
Frame = +1 / -3
Query: 364 AHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYSGKRSCWPMT 543
A MSAQF PSKKGCCLISVAP S GS TS LIRSLA KLT+G SG T
Sbjct: 722 AQRMSAQFKPSKKGCCLISVAPLCVPSLFSGSLTSSSLIRSLA*KLTSGLSGNLRLSDTT 543
Query: 544 LNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDIDRASLG 723
L SV+ +PLKGV P SS + TPKVHQSTA PWPSPL+ISGARYS VPT + RAS+G
Sbjct: 542 LASVSSFPEPLKGVMPYRSS*RKTPKVHQSTAAPWPSPLIISGARYSWVPTKEFGRASVG 363
Query: 724 SAMS 735
SA S
Sbjct: 362 SATS 351
Score = 103 bits (220), Expect = 1e-021
Identities = 49/121 (40%), Positives = 77/121 (63%)
Frame = +3 / -2
Query: 372 YERPIHALKEGMLLDLRGSTLVGQPLLGLLHKQTPDQIPRREADGRVLREAQLLANDIEQ 551
YE PI ALKE +LLDL + QP+L L Q PD+I + + R +RE + L + I
Sbjct: 714 YECPIQALKERVLLDLSSPFVCSQPILRLFD*QFPDKISSLKTNKRAIRELEAL*HHIG* 535
Query: 552 RGPVAGSLERRLPEQQLVQEYPEGPPVDGAAMALAFDDLGGQVLVRPNERHRPCVAGLCY 731
R ++ +L+R Q+LV++ + PP++G++MAL+FD+L GQV + PN+ R C+ GL +
Sbjct: 534 RFLISRTLKRCNAIQKLVKKNTKSPPINGSSMALSFDNLRGQVFMGPNKGIRACIGGLSH 355
Query: 732 E 734
+
Sbjct: 354 K 352
>gb|DN499789.1|DN499789 T087C12.5pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T087C12 5', mRNA sequence
Length = 852
Score = 173 bits (372), Expect(2) = 2e-056
Identities = 68/88 (77%), Positives = 76/88 (86%)
Frame = -2 / +3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP+DAR SFVGTHEYLAPEIIKGEGHG+AVDWWTFGVFLYELL+G TPFKGS N
Sbjct: 351 LVAEPTDARPNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGITPFKGSGNEE 530
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRG 471
TL NV+ + L+FP+ P VSF ARDLIRG
Sbjct: 531 TLANVVSESLKFPDSPLVSFQARDLIRG 614
Score = 124 bits (266), Expect(2) = 5e-039
Identities = 57/88 (64%), Positives = 64/88 (72%)
Frame = +1 / -3
Query: 472 PLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWP 651
PLIRSLA KLT+G SG TL SV+ +PLKGV P SS + TPKVHQSTA PWP
Sbjct: 613 PLIRSLA*KLTSGLSGNLRLSDTTLASVSSFPEPLKGVMPYRSS*RKTPKVHQSTAAPWP 434
Query: 652 SPLMISGARYSCVPTNDIDRASLGSAMS 735
SPL+ISGARYS VPT + RAS+GSA S
Sbjct: 433 SPLIISGARYSWVPTKEFGRASVGSATS 350
Score = 66.6 bits (139), Expect(2) = 2e-056
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = -2 / +2
Query: 431 RGATEIKQHPFFEGVNWALIRCASPPE 351
+GATEIKQHPFFEG+NWALIRCA PPE
Sbjct: 656 KGATEIKQHPFFEGLNWALIRCAIPPE 736
Score = 56.5 bits (117), Expect(2) = 5e-039
Identities = 23/29 (79%), Positives = 24/29 (82%)
Frame = +1 / -1
Query: 343 FGTSGGLAHLMSAQFTPSKKGCCLISVAP 429
F SGG+A MSAQF PSKKGCCLISVAP
Sbjct: 744 FWYSGGMAQRMSAQFKPSKKGCCLISVAP 658
>gb|AI162152.1|AI162152 A012P77U Hybrid aspen plasmid library Populus tremula x Populus
tremuloides cDNA 5', mRNA sequence
Length = 481
Score = 215 bits (464), Expect = 2e-055
Identities = 86/104 (82%), Positives = 96/104 (92%)
Frame = -2 / +2
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
LIAEP++ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FLYELLFGKTPFKG+ NRA
Sbjct: 107 LIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGAGNRA 286
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGA 423
TLFNV+GQ LRFPE P VSF+A+DL + LLVKEPQ RLAY+ G+
Sbjct: 287 TLFNVVGQPLRFPESPTVSFAAKDLDQRLLVKEPQHRLAYRXGS 418
Score = 162 bits (349), Expect = 2e-039
Identities = 71/103 (68%), Positives = 78/103 (75%)
Frame = +1 / -2
Query: 427 PRL*ASRCWGSFTSRPLIRSLAEKLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSY 606
P L*A RC GSFTS +S A KLT G SG + WP TLNSVAR PLKGV PN SS
Sbjct: 414 PXL*ARRCCGSFTSNL*SKSFAAKLTVGDSGNLNGWPTTLNSVARFPAPLKGVLPNKSS* 235
Query: 607 KNTPKVHQSTALPWPSPLMISGARYSCVPTNDIDRASLGSAMS 735
+N P VHQSTALPWPSPL+ISGA+YSCVPT DI+RA +GSAMS
Sbjct: 234 RNIPNVHQSTALPWPSPLIISGAKYSCVPTKDIERAFVGSAMS 106
>gb|CF228348.1|CF228348 PtaXM0011H7H0715 Poplar cDNA library from mature xylem Populus alba
x Populus tremula cDNA 5', mRNA sequence
Length = 645
Score = 215 bits (463), Expect = 3e-055
Identities = 77/133 (57%), Positives = 103/133 (77%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
++AEP D RSMSFVGTHEYLAPEI+ GEGHG+AVDWWT G+F++E+ +G TPFKG +
Sbjct: 184 IVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGNAVDWWTLGIFMFEMFYGVTPFKGMDHEL 363
Query: 554 TLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWAL 375
TL N++ + L FP+ P++ A+DLI LL+K+P +RL GAT IK H FF+G+NWAL
Sbjct: 364 TLANIVARALEFPKEPSIPVLAKDLITQLLIKDPVRRLGSTMGATAIKHHQFFDGINWAL 543
Query: 374 IRCASPPEVPKPV 336
+RC +PP +P+PV
Sbjct: 544 LRCRTPPYIPRPV 582
Score = 85.4 bits (180), Expect(2) = 3e-026
Identities = 37/53 (69%), Positives = 41/53 (77%)
Frame = +1 / -2
Query: 571 PLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDIDRASLGSA 729
PL GV P + S N PKVHQSTALP PSP ISGA+YS VPTND+DR S+GSA
Sbjct: 347 PLNGVTP*NISNMNMPKVHQSTALPCPSPDTISGAKYSWVPTNDMDRTSIGSA 189
Score = 53.3 bits (110), Expect(2) = 3e-026
Identities = 28/61 (45%), Positives = 34/61 (55%)
Frame = +1 / -2
Query: 337 TGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYS 516
TG G GG+ HL SAQF PSK CL++VAP + SR GS +I+S A G
Sbjct: 581 TGRGI*GGVLHLSSAQFIPSKN*WCLMAVAPMVEPSRLTGSLMRSWVIKSFARTGIEGSL 402
Query: 517 G 519
G
Sbjct: 401 G 399
>gb|CV261185.1|CV261185 WS02016.B21_B13 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02016_B13 3', mRNA sequence
Length = 592
Score = 213 bits (459), Expect = 1e-054
Identities = 79/135 (58%), Positives = 100/135 (74%)
Frame = -2 / -2
Query: 731 IAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRAT 552
+AEP D RSMSFVGTHEYLAPEI+ GEGHGS VDWWT G+F++EL +G TPF+G + T
Sbjct: 504 VAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGVDHELT 325
Query: 551 LFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
L N++ + L FP+ P V +A+DLI LLVK+P +R+ GA+ +K HPFF+GVNWAL+
Sbjct: 324 LANIVARALEFPKEPVVPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNWALL 145
Query: 371 RCASPPEVPKPVEIE 327
RC PP VP P E
Sbjct: 144 RCTPPPYVPPPFNTE 100
Score = 142 bits (304), Expect = 3e-033
Identities = 72/137 (52%), Positives = 80/137 (58%)
Frame = +1 / +2
Query: 319 DGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEK 498
D S+ G GT GG H +AQ TP KKG CL + AP + R GS TS IRS A
Sbjct: 92 DTTSVLNGGGTYGGGVHRNNAQLTPWKKGWCLTADAPMVEPIRLAGSLTSSCEIRSFAVA 271
Query: 499 LTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGAR 678
T G G S L V+ PLKGV P +SS N P VHQST LPWPSP ISGA+
Sbjct: 272 GTTGSLGNSSARATILARVSSWSTPLKGVTP*NSSNMNIPSVHQSTGLPWPSPDTISGAK 451
Query: 679 YSCVPTNDIDRASLGSA 729
YS VPTND+DR S GSA
Sbjct: 452 YSWVPTNDMDRTSTGSA 502
>gb|CV241963.1|CV241963 WS02513.B21_M01 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02513_M01 3', mRNA sequence
Length = 754
Score = 212 bits (458), Expect = 2e-054
Identities = 78/135 (57%), Positives = 100/135 (74%)
Frame = -2 / -3
Query: 731 IAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRAT 552
+AEP D RSMSF+GTHEYLAPEI+ GEGHGS VDWWT G+F++EL +G TPF+G + T
Sbjct: 518 VAEPVDVRSMSFIGTHEYLAPEIVSGEGHGSPVDWWTLGIFMFELFYGVTPFRGVDHELT 339
Query: 551 LFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
L N++ + L FP+ P V +A+DLI LLVK+P +R+ GA+ +K HPFF+GVNWAL+
Sbjct: 338 LANIVARALEFPKEPVVPATAKDLISQLLVKDPARRMGSTMGASAVKHHPFFQGVNWALL 159
Query: 371 RCASPPEVPKPVEIE 327
RC PP VP P E
Sbjct: 158 RCTPPPYVPPPFNTE 114
Score = 140 bits (301), Expect = 8e-033
Identities = 72/137 (52%), Positives = 79/137 (57%)
Frame = +1 / +1
Query: 319 DGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEK 498
D S+ G GT GG H +AQ TP KKG CL + AP + R GS TS IRS A
Sbjct: 106 DTTSVLNGGGTYGGGVHRNNAQLTPWKKGWCLTADAPMVEPIRLAGSLTSSCEIRSFAVA 285
Query: 499 LTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGAR 678
T G G S L V+ PLKGV P +SS N P VHQST LPWPSP ISGA+
Sbjct: 286 GTTGSLGNSSARATILARVSSWSTPLKGVTP*NSSNMNIPSVHQSTGLPWPSPDTISGAK 465
Query: 679 YSCVPTNDIDRASLGSA 729
YS VP NDIDR S GSA
Sbjct: 466 YSWVPINDIDRTSTGSA 516
>gb|DN489293.1|DN489293 T021A10.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T021A10 3', mRNA sequence
Length = 695
Score = 140 bits (300), Expect(2) = 5e-048
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = -2 / -1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT GVFLYE+L+G+TPFKG +N
Sbjct: 521 LVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNEK 342
Query: 554 TLFNVIGQQLRFP 516
TL N++ Q L FP
Sbjct: 341 TLINILKQPLTFP 303
Score = 96.8 bits (205), Expect(2) = 3e-026
Identities = 41/64 (64%), Positives = 46/64 (71%)
Frame = +1 / +1
Query: 544 LNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDIDRASLG 723
L V L PLKGV P + SYKNTP+VHQSTALPWP P + SGA+YS VPT D D A +G
Sbjct: 331 LIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPTKDFDLALIG 510
Query: 724 SAMS 735
SA S
Sbjct: 511 SATS 522
Score = 71.2 bits (149), Expect(2) = 5e-048
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -2 / -1
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVP 345
+DL+ LLVK P++R+ +G+ EIK+H FF+GVNWALIR PPE P
Sbjct: 254 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALIRSIKPPESP 111
Score = 43.7 bits (89), Expect(2) = 3e-026
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1 / +1
Query: 325 LSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAP 429
L++ G SGGL L+ AQFTP K C LIS P
Sbjct: 91 LNLQRSLGDSGGLIDLIKAQFTPLKNSCLLISTDP 195
>gb|BI137613.1|BI137613 F089P39Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 482
Score = 140 bits (300), Expect(2) = 5e-048
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT GVFLYE+L+G+TPFKG +N
Sbjct: 67 LVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNEK 246
Query: 554 TLFNVIGQQLRFP 516
TL N++ Q L FP
Sbjct: 247 TLINILKQPLTFP 285
Score = 95.5 bits (202), Expect(2) = 3e-025
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +1 / -1
Query: 544 LNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDIDRASLG 723
L V L PLKGV P + SYKNTP+VHQSTALPWP P + SGA+YS VPT D D A +G
Sbjct: 257 LIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPTKDFDLALMG 78
Query: 724 SA 729
SA
Sbjct: 77 SA 72
Score = 71.2 bits (149), Expect(2) = 5e-048
Identities = 27/48 (56%), Positives = 36/48 (75%)
Frame = -2 / +1
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVP 345
+DL+ LLVK P++R+ +G+ EIK+H FF+GVNWALIR PPE P
Sbjct: 334 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALIRSIKPPESP 477
Score = 40.9 bits (83), Expect(2) = 3e-025
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1 / -1
Query: 346 GTSGGLAHLMSAQFTPSKKGCCLISVAP 429
G SGGL L+ AQFTP K C LIS P
Sbjct: 476 GDSGGLIDLIKAQFTPLKNSCLLISTDP 393
>gb|BI135709.1|BI135709 F057P33Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 452
Score = 140 bits (300), Expect(2) = 2e-044
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT GVFLYE+L+G+TPFKG +N
Sbjct: 67 LVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNEK 246
Query: 554 TLFNVIGQQLRFP 516
TL N++ Q L FP
Sbjct: 247 TLINILKQPLTFP 285
Score = 95.5 bits (202), Expect(2) = 4e-022
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +1 / -1
Query: 544 LNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDIDRASLG 723
L V L PLKGV P + SYKNTP+VHQSTALPWP P + SGA+YS VPT D D A +G
Sbjct: 257 LIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPTKDFDLALMG 78
Query: 724 SA 729
SA
Sbjct: 77 SA 72
Score = 58.8 bits (122), Expect(2) = 2e-044
Identities = 22/39 (56%), Positives = 31/39 (79%)
Frame = -2 / +1
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
+DL+ LLVK P++R+ +G+ EIK+H FF+GVNWALI
Sbjct: 334 QDLVGKLLVKNPKRRIGSLKGSVEIKRHEFFKGVNWALI 450
Score = 30.4 bits (60), Expect(2) = 4e-022
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +1 / -1
Query: 370 LMSAQFTPSKKGCCLISVAP 429
L+ AQFTP K C LIS P
Sbjct: 452 LIKAQFTPLKNSCLLISTDP 393
>gb|CV259744.1|CV259744 WS02012.B21_C15 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02012_C15 3', mRNA sequence
Length = 775
Score = 176 bits (379), Expect = 1e-043
Identities = 66/123 (53%), Positives = 90/123 (73%)
Frame = -2 / -2
Query: 707 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQ 528
S SFVGT EY+APEII G GH SAVDWW G+ LYE+L+G TPF+G + + T N++ +
Sbjct: 726 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 547
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEV 348
L+FP VS +A+ L+ LL ++P+ RL + GA +IK+HPFF+GVNWAL+RC +PPE+
Sbjct: 546 LKFPGSIPVSLNAKQLMYRLLHRDPKNRLGSREGANDIKRHPFFKGVNWALVRCLNPPEL 367
Query: 347 PKP 339
P
Sbjct: 366 EAP 358
Score = 112 bits (239), Expect = 3e-024
Identities = 57/131 (43%), Positives = 69/131 (52%)
Frame = +1 / +2
Query: 316 FDGLSISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAE 495
F G +SGG SAQ TP K GC LIS AP + GS S+ I A
Sbjct: 335 FSSPDSKNGASSSGGFKQRTSAQLTPLKNGCRLISFAPSREPNLFLGSLCSKRYINCFAL 514
Query: 496 KLTAGYSGKRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGA 675
+LT G L +V L+ PL GV+P S SY P+ HQSTAL WP+P+MISGA
Sbjct: 515 RLTGILPGNLRSL*RMLANVFCLVFPLNGVYP*SISYSRIPRAHQSTALVWPAPVMISGA 694
Query: 676 RYSCVPTNDID 708
YS VPT + +
Sbjct: 695 IYSSVPTKEFE 727
>gb|DN486644.1|DN486644 P047G09.3pR Populus petioles cDNA library Populus tremula cDNA
clone P047G09 3', mRNA sequence
Length = 759
Score = 173 bits (373), Expect = 9e-043
Identities = 65/123 (52%), Positives = 89/123 (72%)
Frame = -2 / -3
Query: 707 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQ 528
S SFVGT EY+APEII G GH SAVDWW G+ LYE+L+G TPF+G + + T N++ +
Sbjct: 652 SNSFVGTEEYIAPEIITGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 473
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEV 348
L+FP VS +A+ + LL ++P+ RL + GA +IK+HPFF+GVNWAL+RC +PPE+
Sbjct: 472 LKFPGRIPVSLNAKQSMYRLLHRDPKNRLGSREGANDIKRHPFFKGVNWALVRCLNPPEL 293
Query: 347 PKP 339
P
Sbjct: 292 EAP 284
Score = 110 bits (235), Expect = 1e-023
Identities = 56/123 (45%), Positives = 68/123 (55%)
Frame = +1 / +3
Query: 340 GFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYSG 519
G +SGG SAQ TP K GC LIS AP + GS S+ I A +LT G
Sbjct: 285 GASSSGGFKQRTSAQLTPLKNGCRLISFAPSREPNLFLGSLCSKRYIDCFAFRLTGIRPG 464
Query: 520 KRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTN 699
L +V L+ PL GV+P S SY P+ HQSTAL WP+P+MISGA YS VPT
Sbjct: 465 NLRSL*RMLANVFCLVFPLNGVYP*SISYSRIPRAHQSTALVWPAPVMISGAIYSSVPTK 644
Query: 700 DID 708
+ +
Sbjct: 645 EFE 653
>gb|CX168744.1|CX168744 E01_69-81_09.ab1 leaf inoculated with Marssonia pathogen of Populus
deltoides Populus deltoides cDNA, mRNA sequence
Length = 584
Score = 172 bits (371), Expect = 2e-042
Identities = 65/123 (52%), Positives = 89/123 (72%)
Frame = -2 / +3
Query: 707 SMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQ 528
S SFVGT EY+APEII G GH SAVDWW G+ LYE+L+G TPF+G + + T N++ +
Sbjct: 165 SNSFVGTEEYIAPEIISGAGHTSAVDWWALGILLYEMLYGYTPFRGKTRQKTFANILHKD 344
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEV 348
L+FP VS +A+ L+ LL ++P+ RL GA +IK+HPFF+GV+WAL+RC +PPE+
Sbjct: 345 LKFPGRIPVSLNAKQLMYRLLHRDPKNRLGSLEGANDIKRHPFFKGVSWALVRCLNPPEL 524
Query: 347 PKP 339
P
Sbjct: 525 EAP 533
Score = 110 bits (235), Expect = 1e-023
Identities = 57/123 (46%), Positives = 67/123 (54%)
Frame = +1 / -2
Query: 340 GFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTAGYSG 519
G +SGG SAQ TP K GC LIS AP S GS S+ I A +LT G
Sbjct: 532 GASSSGGFKQRTSAQLTPLKNGCRLISFAPSSEPSLFLGSLCSKRYINCFALRLTGIRPG 353
Query: 520 KRSCWPMTLNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTN 699
L +V L+ PL GV+P S SY P+ HQSTAL WP+P MISGA YS VPT
Sbjct: 352 NLRSL*RMLANVFCLVFPLNGVYP*SISYSRIPRAHQSTALVWPAPDMISGAIYSSVPTK 173
Query: 700 DID 708
+ +
Sbjct: 172 EFE 164
>gb|BI137634.1|BI137634 F089P73Y Populus flower cDNA library Populus trichocarpa cDNA, mRNA
sequence
Length = 471
Score = 140 bits (300), Expect(2) = 7e-042
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = -2 / +1
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
L+AEP ARS SFVGTHEYLAPE+I G+GHGSAVDWWT GVFLYE+L+G+TPFKG +N
Sbjct: 67 LVAEPISARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGRTPFKGENNEK 246
Query: 554 TLFNVIGQQLRFP 516
TL N++ Q L FP
Sbjct: 247 TLINILKQPLTFP 285
Score = 95.5 bits (202), Expect(2) = 2e-024
Identities = 40/62 (64%), Positives = 45/62 (72%)
Frame = +1 / -2
Query: 544 LNSVARLLDPLKGVFPNSSSYKNTPKVHQSTALPWPSPLMISGARYSCVPTNDIDRASLG 723
L V L PLKGV P + SYKNTP+VHQSTALPWP P + SGA+YS VPT D D A +G
Sbjct: 257 LIKVFSLFSPLKGVLPYNISYKNTPRVHQSTALPWPCPDITSGAKYSWVPTKDFDLALMG 78
Query: 724 SA 729
SA
Sbjct: 77 SA 72
Score = 50.6 bits (104), Expect(2) = 7e-042
Identities = 19/34 (55%), Positives = 24/34 (70%)
Frame = -2 / +2
Query: 455 PQQRLAYKRGATEIKQHPFFEGVNWALIRCASPP 354
P+ L +G+ EIK+H FF+GVNWALIR PP
Sbjct: 368 PKGELGA*KGSVEIKRHEFFKGVNWALIRSIKPP 469
Score = 38.6 bits (78), Expect(2) = 2e-024
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +1 / -1
Query: 352 SGGLAHLMSAQFTPSKKGCCLISVAP 429
SGGL L+ AQFTP K C LIS P
Sbjct: 471 SGGLIDLIKAQFTPLKNSCLLISTDP 394
>gb|DT520021.1|DT520021 WS02446.B21.1_F15 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02446_F15 3', mRNA sequence
Length = 911
Score = 169 bits (364), Expect = 2e-041
Identities = 66/85 (77%), Positives = 75/85 (88%)
Frame = -2 / -2
Query: 581 PFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHP 402
PFKG+ NRATL+NV+GQ LRFPE P VSF+ARDLIRGLLVKEPQ RLAY+RGATEIKQHP
Sbjct: 910 PFKGAGNRATLYNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHP 731
Query: 401 FFEGVNWALIRCASPPEVPKPVEIE 327
FF+ +NWALIRC +PPEVPK +E
Sbjct: 730 FFQSINWALIRCTNPPEVPKQAIME 656
Score = 122 bits (260), Expect = 3e-027
Identities = 57/85 (67%), Positives = 59/85 (69%)
Frame = +1 / +3
Query: 328 SISTGFGTSGGLAHLMSAQFTPSKKGCCLISVAPRL*ASRCWGSFTSRPLIRSLAEKLTA 507
SI FGTSGG MSAQ K GCC ISVAPRL*A RC GSFTS+PLI+SLA KLT
Sbjct: 657 SIIACFGTSGGFVQRMSAQLML*KNGCCFISVAPRL*ARRCCGSFTSKPLIKSLAAKLTV 836
Query: 508 GYSGKRSCWPMTLNSVARLLDPLKG 582
G SG S WP TL SVAR PLKG
Sbjct: 837 GDSGNLSGWPTTLYSVARFPAPLKG 911
>gb|CV264069.1|CV264069 WS02023.B21_I14 PTxN-IB-N-A-11 Populus trichocarpa x Populus nigra
cDNA clone WS02023_I14 3', mRNA sequence
Length = 423
Score = 149 bits (320), Expect = 2e-035
Identities = 54/104 (51%), Positives = 73/104 (70%)
Frame = -2 / -1
Query: 638 AVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVK 459
AVDWWT G+F++EL +G TPF+G + TL N++ + L FP+ P V +A+DLI LLVK
Sbjct: 423 AVDWWTLGIFMFELFYGVTPFRGVDHELTLANIVARALEFPKEPVVPATAKDLISQLLVK 244
Query: 458 EPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
+P +R+ GA+ +K HPFF+GVNWAL+RC PP VP P E
Sbjct: 243 DPARRMGSTMGASAVKHHPFFQGVNWALLRCTPPPYVPPPFNTE 112
>gb|DT481483.1|DT481483 WS02532.BR_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A02 5', mRNA sequence
Length = 880
Score = 146 bits (313), Expect = 2e-034
Identities = 55/101 (54%), Positives = 69/101 (68%)
Frame = -2 / +2
Query: 668 EIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSA 489
EII G GH SA+DWW G+ LYE+L+G+TPF+G + + T N++ + L FP VS S
Sbjct: 236 EIITGMGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLSG 415
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRC 366
R LI LL ++P RL K GA EIKQHPFF G+NW LIRC
Sbjct: 416 RQLINALLNRDPSIRLGSKAGANEIKQHPFFRGINWPLIRC 538
>gb|DT486813.1|DT486813 WS02532.B21_A02 PT-MB-N-A-15 Populus trichocarpa cDNA clone
WS02532_A02 3', mRNA sequence
Length = 880
Score = 146 bits (313), Expect = 2e-034
Identities = 55/101 (54%), Positives = 69/101 (68%)
Frame = -2 / -2
Query: 668 EIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRFPEYPAVSFSA 489
EII G GH SA+DWW G+ LYE+L+G+TPF+G + + T N++ + L FP VS S
Sbjct: 645 EIITGMGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLSG 466
Query: 488 RDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRC 366
R LI LL ++P RL K GA EIKQHPFF G+NW LIRC
Sbjct: 465 RQLINALLNRDPSIRLGSKAGANEIKQHPFFRGINWPLIRC 343
>gb|DV463015.1|DV463015 MTUNUL1.P10.F03 NUL Populus fremontii x Populus angustifolia cDNA,
mRNA sequence
Length = 792
Score = 82.2 bits (173), Expect(2) = 2e-032
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = -2 / -3
Query: 674 APEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNV 540
APE++ G GHG+ VDWW FGV +YELL+G TPFKG S +TL N+
Sbjct: 790 APELLSGNGHGNGVDWWAFGVLVYELLYGTTPFKGGSKESTLRNI 656
Score = 77.1 bits (162), Expect(2) = 2e-032
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -2 / -3
Query: 491 ARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEV 348
ARDL+ LLVK P+QRL +GAT+IK+HPFF+G+ W LIR PPEV
Sbjct: 595 ARDLVEKLLVKNPRQRLGCIKGATDIKRHPFFDGIKWPLIRNYKPPEV 452
>gb|CV254493.1|CV254493 WS0241.B21_G02 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS0241_G02 3', mRNA sequence
Length = 895
Score = 94.1 bits (199), Expect(2) = 3e-032
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = -2 / -3
Query: 710 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQ 531
RS SFVGT EY++PE+++G+GH AVDWW G+ YE+L+G TPFKG + + T NV+ +
Sbjct: 725 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSYEMLYGTTPFKGKNRKETFRNVLLK 546
Query: 530 QLRF 519
+ F
Sbjct: 545 KPEF 534
Score = 64.8 bits (135), Expect(2) = 3e-032
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = -2 / -3
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
L+ PE+ DLI LL K+P QRL Y+RGA EIK+H FF+GV W L+
Sbjct: 551 LKKPEFVGKRNDLTDLIERLLEKDPTQRLGYQRGACEIKEHGFFKGVRWDLL 396
>gb|DT518009.1|DT518009 WS02435.B21_P01 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02435_P01 3', mRNA sequence
Length = 869
Score = 94.1 bits (199), Expect(2) = 3e-032
Identities = 33/64 (51%), Positives = 47/64 (73%)
Frame = -2 / -3
Query: 710 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQ 531
RS SFVGT EY++PE+++G+GH AVDWW G+ YE+L+G TPFKG + + T NV+ +
Sbjct: 726 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSYEMLYGTTPFKGKNRKETFRNVLLK 547
Query: 530 QLRF 519
+ F
Sbjct: 546 KPEF 535
Score = 64.8 bits (135), Expect(2) = 3e-032
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = -2 / -3
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
L+ PE+ DLI LL K+P QRL Y+RGA EIK+H FF+GV W L+
Sbjct: 552 LKKPEFVGKRNDLTDLIERLLEKDPTQRLGYQRGACEIKEHGFFKGVRWDLL 397
>gb|DT517326.1|DT517326 WS02433.B21_P21 PTxD-ICC-N-A-14 Populus trichocarpa x Populus
deltoides cDNA clone WS02433_P21 3', mRNA sequence
Length = 760
Score = 90.9 bits (192), Expect(2) = 8e-031
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = -2 / -1
Query: 710 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQ 531
RS SFVGT EY++PE+++G+GH AVDWW G+ +E+L+G TPF G + + T NV+ +
Sbjct: 733 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSFEMLYGTTPFVGKNRKETFRNVLAK 554
Query: 530 QLRF 519
+ F
Sbjct: 553 KPEF 542
Score = 62.9 bits (131), Expect(2) = 8e-031
Identities = 26/49 (53%), Positives = 32/49 (65%)
Frame = -2 / -1
Query: 518 PEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
PE+ DLI LL K+P QRL Y+RGA EIK+H FF+GV W L+
Sbjct: 550 PEFIGKRNELTDLIERLLEKDPTQRLGYQRGACEIKEHVFFKGVRWDLL 404
>gb|CF232477.1|CF232477 PtaJXO0011A11A1101 Poplar cDNA library from young opposite xylem
Populus alba x Populus tremula cDNA 5', mRNA sequence
Length = 649
Score = 89.0 bits (188), Expect(2) = 2e-030
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = -2 / +1
Query: 710 RSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQ 531
RS SFVGT EY++PE+++G+GH AVDWW G+ +E+L+G TPF G + + T NV+ +
Sbjct: 238 RSNSFVGTEEYVSPEVVRGDGHEFAVDWWALGILSFEMLYGTTPFVGKNRKETFRNVLIK 417
Query: 530 QLRF 519
+ F
Sbjct: 418 KPEF 429
Score = 63.4 bits (132), Expect(2) = 2e-030
Identities = 26/52 (50%), Positives = 34/52 (65%)
Frame = -2 / +1
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALI 372
++ PE+ DLI LL K+P QRL Y+RGA EIK+H FF+GV W L+
Sbjct: 412 IKKPEFIGKRNELTDLIERLLEKDPTQRLGYQRGACEIKEHVFFKGVRWDLL 567
>gb|BI129456.1|BI129456 G090P88Y Populus cambium cDNA library Populus tremula x Populus
tremuloides cDNA, mRNA sequence
Length = 520
Score = 131 bits (281), Expect = 4e-030
Identities = 49/62 (79%), Positives = 56/62 (90%)
Frame = -2 / +2
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRA 555
++ EP+ ARS SFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FL+ELL+G+TPFKGS N
Sbjct: 323 VVVEPTSARSNSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLFELLYGRTPFKGSGNEE 502
Query: 554 TL 549
TL
Sbjct: 503 TL 508
>gb|BP933399.1|BP933399 BP933399 full-length enriched poplar cDNA library Populus nigra
cDNA clone PnFL1-050_O04.r 3', mRNA sequence
Length = 652
Score = 129 bits (276), Expect = 2e-029
Identities = 51/74 (68%), Positives = 59/74 (79%)
Frame = -2 / -1
Query: 563 NRATLFNVIGQQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVN 384
N TL NV+ + L+FP+ P V F ARDLIR LLVKEP+ RL +GATEIKQHPFFEG+N
Sbjct: 649 NEETLANVVSESLKFPDSPLVGFQARDLIRELLVKEPENRLGTHKGATEIKQHPFFEGLN 470
Query: 383 WALIRCASPPEVPK 342
WALIRCA PPEVP+
Sbjct: 469 WALIRCAIPPEVPE 428
>gb|DN489864.1|DN489864 T087C12.3pR Populus shoot meristem cDNA library Populus tremula x
Populus tremuloides cDNA clone T087C12 3', mRNA sequence
Length = 517
Score = 116 bits (249), Expect = 1e-025
Identities = 46/64 (71%), Positives = 53/64 (82%)
Frame = -2 / -2
Query: 533 QQLRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPP 354
+ L+FP+ P VSF ARDLIR L VKEP+ RL +GATEIKQHPFFEG+NWALIRCA PP
Sbjct: 516 ESLKFPDSPLVSFQARDLIRELQVKEPENRLGTHKGATEIKQHPFFEGLNWALIRCAIPP 337
Query: 353 EVPK 342
EVP+
Sbjct: 336 EVPE 325
>gb|CV233282.1|CV233282 WS0121.B21_J05 PT-GT-FL-A-3 Populus trichocarpa cDNA clone
WS0121_J05 3', mRNA sequence
Length = 539
Score = 115 bits (246), Expect = 3e-025
Identities = 45/55 (81%), Positives = 50/55 (90%)
Frame = -2 / -1
Query: 491 ARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIE 327
++DLIRGLLVKEPQ RL KRGATEIKQHPFFE VNWALIRC++PPEVP+PVE E
Sbjct: 539 SQDLIRGLLVKEPQHRLGVKRGATEIKQHPFFESVNWALIRCSTPPEVPRPVETE 375
>gb|BU813391.1|BU813391 N009H07 Populus bark cDNA library Populus tremula x Populus
tremuloides cDNA 5 prime, mRNA sequence
Length = 386
Score = 110 bits (234), Expect = 1e-023
Identities = 42/47 (89%), Positives = 46/47 (97%)
Frame = -2 / +3
Query: 734 LIAEPSDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGVFLYELL 594
L+AEP+ ARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFG+FL+ELL
Sbjct: 246 LVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELL 386
>gb|CK092664.1|CK092664 G090P88.3pR Populus tension wood cDNA library Populus tremula x
Populus tremuloides cDNA clone G090P88 3', mRNA sequence
Length = 593
Score = 104 bits (222), Expect = 6e-022
Identities = 40/56 (71%), Positives = 46/56 (82%)
Frame = -2 / -2
Query: 509 PAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPK 342
P VSF ARDLIRGLL+KEP+ RL +GA EIKQHPF +G+NWALIRC PPE+PK
Sbjct: 592 PIVSFHARDLIRGLLIKEPRNRLGSAKGAAEIKQHPFLDGLNWALIRCTIPPELPK 425
>gb|DN503105.1|DN503105 X057B02.5pR Populus wood cDNA library Populus tremula x Populus
tremuloides cDNA clone X057B02 5', mRNA sequence
Length = 512
Score = 67.0 bits (140), Expect(2) = 1e-020
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = -2 / +2
Query: 665 IIKGEGHGSAVDWWTFGVFLYELLFGKTPFKGSSNRATLFNVIGQQLRF 519
+++G+GH AVDWW G+ YE+L+G TPFKG + T NV+ ++ F
Sbjct: 26 VVRGDGHEFAVDWWALGILSYEMLYGTTPFKGKDRKETFRNVLLKKPEF 172
Score = 52.8 bits (109), Expect(2) = 1e-020
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = -2 / +2
Query: 527 LRFPEYPAVSFSARDLIRGLLVKEPQQRLAYKRGATEIKQHPFF 396
L+ PE+ DLI LL K+P QRL Y+RGA EIK+H FF
Sbjct: 155 LKKPEFVGKRNDLTDLIERLLQKDPTQRLGYQRGACEIKEHGFF 286
Database: Populus_nucl_with_EST.fasta
Posted date: Feb 7, 2006 2:49 PM
Number of letters in database: 203,408,664
Number of sequences in database: 369,679
Lambda K H
0.318 0.134 0.401
Matrix: BLOSUM62
Number of Hits to DB: 368,141,348
Number of Sequences: 369679
Number of extensions: 5335646
Number of successful extensions: 54082
Number of sequences better than 1.0e-020: 46
length of database: 67,802,888
effective HSP length: 52
effective length of database: 48,579,580
effective search space used: 9327279360
frameshift window, decay const: 40, 0.5
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 0 ( 0.0 bits)
S1: 41 (21.7 bits)